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Volumn 42, Issue 3, 2003, Pages 285-291

Comparison of phylogenies based on nuclear-encoded SSU rDNA and plastid-encoded psbA in the symbiotic dinoflagellate genus Symbiodinium

Author keywords

[No Author keywords available]

Indexed keywords

ALGAE; DINOPHYCEAE; EUKARYOTA; INVERTEBRATA; PROTISTA; SYMBIODINIUM;

EID: 0038480129     PISSN: 00318884     EISSN: None     Source Type: Journal    
DOI: 10.2216/i0031-8884-42-3-285.1     Document Type: Article
Times cited : (43)

References (45)
  • 2
    • 0034492205 scopus 로고    scopus 로고
    • Conspecificity and Indo-Pacific distribution of Symbiodinium genotypes (Dinophyceae) from giant clams
    • BAILLIE B.K., BELDA-BAILLIE C.A. & MARUYAMA T. 2000. Conspecificity and Indo-Pacific distribution of Symbiodinium genotypes (Dinophyceae) from giant clams. Journal of Phycology 36:1153-1161.
    • (2000) Journal of Phycology , vol.36 , pp. 1153-1161
    • Baillie, B.K.1    Belda-Baillie, C.A.2    Maruyama, T.3
  • 3
    • 0028995854 scopus 로고
    • Effects of ultraviolet (UV) radiation on marine microalgal-invertebrate symbioses. I. Response of the algal symbionts in culture and in hospite
    • BANASZAK A.T. & TRENCH R.K. 1995. Effects of ultraviolet (UV) radiation on marine microalgal-invertebrate symbioses. I. Response of the algal symbionts in culture and in hospite. Journal of Experimental Marine Biology and Ecology 194: 213-232.
    • (1995) Journal of Experimental Marine Biology and Ecology , vol.194 , pp. 213-232
    • Banaszak, A.T.1    Trench, R.K.2
  • 4
    • 0033834347 scopus 로고    scopus 로고
    • Minicircular plastid DNA in the dinoflagellate Amphidinium operculatum
    • BARBROOK A.C. & HOWE C.J. 2000. Minicircular plastid DNA in the dinoflagellate Amphidinium operculatum. Molecular and General Genetics 263: 152-158.
    • (2000) Molecular and General Genetics , vol.263 , pp. 152-158
    • Barbrook, A.C.1    Howe, C.J.2
  • 6
    • 51249182234 scopus 로고
    • Fatty acid composition of symbiotic zooxanthellae in relation to their host
    • BISHOP C.A. & KENRICK J.R. 1981. Fatty acid composition of symbiotic zooxanthellae in relation to their host. Lipids 15: 799-804.
    • (1981) Lipids , vol.15 , pp. 799-804
    • Bishop, C.A.1    Kenrick, J.R.2
  • 7
    • 0032727278 scopus 로고    scopus 로고
    • Phylogenetic position of Symbiodinium (Dinophyceae) isolates from tridacnids (Bivalvia), cardiids (Bivalvia), a sponge (Porifera), a soft coral (Anthozoa), and a free-living strain
    • CARLOS A.A., BAILLIE B.K., KAWACHI M. & MARUYAMA T. 1999. Phylogenetic position of Symbiodinium (Dinophyceae) isolates from tridacnids (Bivalvia), cardiids (Bivalvia), a sponge (Porifera), a soft coral (Anthozoa), and a free-living strain. Journal of Phycology 35: 1054-1062.
    • (1999) Journal of Phycology , vol.35 , pp. 1054-1062
    • Carlos, A.A.1    Baillie, B.K.2    Kawachi, M.3    Maruyama, T.4
  • 8
    • 0344912923 scopus 로고
    • Mechanisms of photoadaptation in three strains of the symbiotic dinoflagellate Symbiodinium microadriaticum
    • CHANG S.S., PREZELIN B.B. & TRENCH R.K. 1983. Mechanisms of photoadaptation in three strains of the symbiotic dinoflagellate Symbiodinium microadriaticum. Marine Biology 76: 219-229.
    • (1983) Marine Biology , vol.76 , pp. 219-229
    • Chang, S.S.1    Prezelin, B.B.2    Trench, R.K.3
  • 9
    • 0001054132 scopus 로고
    • Phylogenetic relationships of dinoflagellates and their plastids
    • Ed. by J.C. Green, B.S.C. Leadbeater & W.I. Diver. The Systematics Association special volume no. 38. Clarendon Press, Oxford
    • DODGE J. 1989. Phylogenetic relationships of dinoflagellates and their plastids. In: The chromophyte algae: problems and perspectives (Ed. by J.C. Green, B.S.C. Leadbeater & W.I. Diver), pp. 207-227. The Systematics Association special volume no. 38. Clarendon Press, Oxford.
    • (1989) The Chromophyte Algae: Problems and Perspectives , pp. 207-227
    • Dodge, J.1
  • 10
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • FELSENSTEIN J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 11
    • 0000122838 scopus 로고
    • Motility patterns of different strains of the symbiotic dinoflagellate Symbiodinium (= Gymnodinium) microadriaticum (Freudenthal) in culture
    • FITT W.K., CHANG S.S. & TRENCH R.K. 1981. Motility patterns of different strains of the symbiotic dinoflagellate Symbiodinium (= Gymnodinium) microadriaticum (Freudenthal) in culture. Bulletin of Marine Science 31: 436-443.
    • (1981) Bulletin of Marine Science , vol.31 , pp. 436-443
    • Fitt, W.K.1    Chang, S.S.2    Trench, R.K.3
  • 13
    • 0027055554 scopus 로고
    • Signal, noise, and reliability in molecular phylogenetic analyses
    • HILLIS D.M. & HUELSENBECK J.P. 1992. Signal, noise, and reliability in molecular phylogenetic analyses. Journal of Heredity 83: 189-195.
    • (1992) Journal of Heredity , vol.83 , pp. 189-195
    • Hillis, D.M.1    Huelsenbeck, J.P.2
  • 14
    • 0028607920 scopus 로고
    • Acclimation and adaptation to irradiance in symbiotic dinoflagellates. I. Responses of the photosynthetic unit to changes in photon flux density
    • IGLESIAS-PRIETO R. & TRENCH R.K. 1994. Acclimation and adaptation to irradiance in symbiotic dinoflagellates. I. Responses of the photosynthetic unit to changes in photon flux density. Marine Ecology Progress Series 113: 163-175.
    • (1994) Marine Ecology Progress Series , vol.113 , pp. 163-175
    • Iglesias-Prieto, R.1    Trench, R.K.2
  • 15
    • 0026331196 scopus 로고
    • Apoprotein composition and spectroscopic characterization of the water-soluble peridinin-chlorophyll a-proteins from three symbiotic dinoflagellates
    • IGLESIAS-PRIETO R., GOVIND N.S. & TRENCH R.K. 1991. Apoprotein composition and spectroscopic characterization of the water-soluble peridinin-chlorophyll a-proteins from three symbiotic dinoflagellates. Proceedings of the Royal Society of London Series B 246: 275-283.
    • (1991) Proceedings of the Royal Society of London Series B , vol.246 , pp. 275-283
    • Iglesias-Prieto, R.1    Govind, N.S.2    Trench, R.K.3
  • 17
    • 0000784856 scopus 로고
    • Rough thylakoid: Translation on photosynthetic membranes
    • JAGENDORF A.T. & MICHAELS A. 1990. Rough thylakoid: translation on photosynthetic membranes. Plant Science 71: 137-145.
    • (1990) Plant Science , vol.71 , pp. 137-145
    • Jagendorf, A.T.1    Michaels, A.2
  • 18
    • 0018485469 scopus 로고
    • The effect of different zooxanthellae on the growth of experimentally reinfected hosts
    • KINZIE R.A. III & CHEE G.S. 1979. The effect of different zooxanthellae on the growth of experimentally reinfected hosts. Biological Bulletin 156: 315-327.
    • (1979) Biological Bulletin , vol.156 , pp. 315-327
    • Kinzie R.A. III1    Chee, G.S.2
  • 19
    • 0023881275 scopus 로고
    • Light-regulated translation of chloroplast proteins. I. Transcripts of psaA-psaB, psbA, and rbcL are associated with polysomes in dark-grown and illuminated barley seedlings
    • KLEIN R.R., MASON H.S. & MULLET J.E. 1988. Light-regulated translation of chloroplast proteins. I. Transcripts of psaA-psaB, psbA, and rbcL are associated with polysomes in dark-grown and illuminated barley seedlings. Journal of Cell Biology 106: 289-301.
    • (1988) Journal of Cell Biology , vol.106 , pp. 289-301
    • Klein, R.R.1    Mason, H.S.2    Mullet, J.E.3
  • 20
    • 0000646585 scopus 로고
    • Sterol synthesis by cultured zooxanthellae: Implications concerning sterol metabolism in the host-symbiont association in Caribbean gorgonians
    • KOKKE W.C.M.C., FENICAL W., BOHLIN C. & DJERASSI C. 1981. Sterol synthesis by cultured zooxanthellae: implications concerning sterol metabolism in the host-symbiont association in Caribbean gorgonians. Comparative Biochemistry and Physiology 68B: 281-287.
    • (1981) Comparative Biochemistry and Physiology , vol.68 B , pp. 281-287
    • Kokke, W.C.M.C.1    Fenical, W.2    Bohlin, C.3    Djerassi, C.4
  • 21
    • 0034761933 scopus 로고    scopus 로고
    • Investigating the biodiversity, ecology, and physiology of endosymbiotic dinoflagellates in the genus Symbiodinium using the ITS region: In search of a species level marker
    • LAJEUNESSE TC. 2001. Investigating the biodiversity, ecology, and physiology of endosymbiotic dinoflagellates in the genus Symbiodinium using the ITS region: in search of a species level marker. Journal of Phycology 37: 866-880.
    • (2001) Journal of Phycology , vol.37 , pp. 866-880
    • Lajeunesse, T.C.1
  • 22
    • 0016776085 scopus 로고
    • Free and membrane-bound chloroplast polyribosomes in Chlamydomonas reinhardtii
    • MARGULIES M.M. & MICHAELS A. 1975. Free and membrane-bound chloroplast polyribosomes in Chlamydomonas reinhardtii. Biochimica et Biophysica Acta 402: 297-308.
    • (1975) Biochimica et Biophysica Acta , vol.402 , pp. 297-308
    • Margulies, M.M.1    Michaels, A.2
  • 24
    • 0035688587 scopus 로고    scopus 로고
    • High genetic diversity and relative specificity among Symbiodinium-like endosymbiotic dinoflagellates in soritid foraminiferans
    • POCHON X., PAWLOWSKI J., ZANINETTI L. & ROWAN R. 2001. High genetic diversity and relative specificity among Symbiodinium-like endosymbiotic dinoflagellates in soritid foraminiferans. Marine Biology 139: 1069-1078.
    • (2001) Marine Biology , vol.139 , pp. 1069-1078
    • Pochon, X.1    Pawlowski, J.2    Zaninetti, L.3    Rowan, R.4
  • 25
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • POSADA D. & CRANDALL K.A. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14: 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 27
    • 0001452304 scopus 로고
    • A molecular genetic classification of zooxanthellae and evolution of animal-algal symbioses
    • ROWAN R. & POWERS D.A. 1991. A molecular genetic classification of zooxanthellae and evolution of animal-algal symbioses. Science 251: 1348-1351.
    • (1991) Science , vol.251 , pp. 1348-1351
    • Rowan, R.1    Powers, D.A.2
  • 28
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • SAITOU N. & NEI M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4: 406-425.
    • (1987) Molecular Biology and Evolution , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 31
    • 0000057967 scopus 로고    scopus 로고
    • Small-subunit ribosomal RNA sequences from selected dinoflagellates: Testing classical evolutionary hypotheses with molecular systematic methods
    • SAUNDERS G.W., HILL D.R.A., SEXTON J.P. & ANDERSEN R.A. 1997. Small-subunit ribosomal RNA sequences from selected dinoflagellates: testing classical evolutionary hypotheses with molecular systematic methods. Plant Systematics and Evolution 11: 237-259.
    • (1997) Plant Systematics and Evolution , vol.11 , pp. 237-259
    • Saunders, G.W.1    Hill, D.R.A.2    Sexton, J.P.3    Andersen, R.A.4
  • 32
    • 0018902819 scopus 로고
    • Genetic variation in Symbiodinium (= Gymnodinium) microadriaticum Freudenthal, and specificity in its symbiosis with marine invertebrates. I. Isoenzyme and soluble protein patterns of axenic cultures of S. microadriaticum
    • SCHOENBERG D.A. & TRENCH R.K. 1980a. Genetic variation in Symbiodinium (= Gymnodinium) microadriaticum Freudenthal, and specificity in its symbiosis with marine invertebrates. I. Isoenzyme and soluble protein patterns of axenic cultures of S. microadriaticum. Proceedings of the Royal Society of London Series B 207: 405-427.
    • (1980) Proceedings of the Royal Society of London Series B , vol.207 , pp. 405-427
    • Schoenberg, D.A.1    Trench, R.K.2
  • 33
    • 0018853271 scopus 로고
    • Genetic variation in Symbiodinium (= Gymnodinium) microadriaticum Freudenthal, and specificity in its symbiosis with marine invertebrates. II. Morphological variation in S. microadriaticum
    • SCHOENBERG D.A. & TRENCH R.K. 1980b. Genetic variation in Symbiodinium (= Gymnodinium) microadriaticum Freudenthal, and specificity in its symbiosis with marine invertebrates. II. Morphological variation in S. microadriaticum. Proceedings of the Royal Society of London Series B 207: 429-444.
    • (1980) Proceedings of the Royal Society of London Series B , vol.207 , pp. 429-444
    • Schoenberg, D.A.1    Trench, R.K.2
  • 35
    • 0032852262 scopus 로고    scopus 로고
    • Molecular cloning and nucleotide sequence analysis of psbA from the dinoflagellates: Origin of the dinoflagellate plastid
    • TAKISHITA K. & UCHIDA A. 1999. Molecular cloning and nucleotide sequence analysis of psbA from the dinoflagellates: origin of the dinoflagellate plastid. Phycological Research 47: 207-216.
    • (1999) Phycological Research , vol.47 , pp. 207-216
    • Takishita, K.1    Uchida, A.2
  • 36
    • 0027157960 scopus 로고
    • Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
    • TAMURA K. & NEI M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular Biology and Evolution 10: 512-526.
    • (1993) Molecular Biology and Evolution , vol.10 , pp. 512-526
    • Tamura, K.1    Nei, M.2
  • 37
    • 0002655950 scopus 로고
    • Symbiotic marine algae; taxonomy and biological fitness
    • Ed. by W.B. Vernberg. University of South Carolina Press, Columbia
    • TAYLOR D.L. 1974. Symbiotic marine algae; taxonomy and biological fitness. In: Symbiosis in the sea (Ed. by W.B. Vernberg), pp. 245-262. University of South Carolina Press, Columbia.
    • (1974) Symbiosis in the Sea , pp. 245-262
    • Taylor, D.L.1
  • 38
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • THOMPSON J.D., HIGGINS D.C. & GIBSON T.J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.C.2    Gibson, T.J.3
  • 39
    • 0000757306 scopus 로고
    • Dinoflagellates in non-parasitic symbioses
    • Ed. by F.J.R. Taylor. Blackwell Scientific Publications, Oxford
    • TRENCH R.K. 1987. Dinoflagellates in non-parasitic symbioses. In: The biology of dinoflagellates (Ed. by F.J.R. Taylor), pp. 530-570. Blackwell Scientific Publications, Oxford.
    • (1987) The Biology of Dinoflagellates , pp. 530-570
    • Trench, R.K.1
  • 40
    • 84986848005 scopus 로고
    • Symbiodinium microadriaticum Freudenthal, S. goreauii sp. nov., S. kawagutii sp. nov. and S. pilosum sp. nov.: Gymnodinioid dinoflagellate symbionts of marine invertebrates
    • TRENCH R.K. & BLANK R.J. 1987. Symbiodinium microadriaticum Freudenthal, S. goreauii sp. nov., S. kawagutii sp. nov. and S. pilosum sp. nov.: gymnodinioid dinoflagellate symbionts of marine invertebrates. Journal of Phycology 23: 469-481.
    • (1987) Journal of Phycology , vol.23 , pp. 469-481
    • Trench, R.K.1    Blank, R.J.2
  • 43
    • 0033536215 scopus 로고    scopus 로고
    • Single gene circles in dinoflagellate chloroplast genomes
    • ZHANG Z., GREEN B.R. & CAVALIER-SMITH T. 1999. Single gene circles in dinoflagellate chloroplast genomes. Nature (London) 400: 155-159.
    • (1999) Nature (London) , vol.400 , pp. 155-159
    • Zhang, Z.1    Green, B.R.2    Cavalier-Smith, T.3
  • 44
    • 0033929166 scopus 로고    scopus 로고
    • Phylogeny of ultra-rapidly evolving dinoflagellate chloroplast genes: A possible common origin for sporozoan and dinoflagellate plastids
    • ZHANG Z., GREEN B.R. & CAVALIER-SMITH T. 2000. Phylogeny of ultra-rapidly evolving dinoflagellate chloroplast genes: a possible common origin for sporozoan and dinoflagellate plastids. Journal of Molecular Evolution 51: 26-40.
    • (2000) Journal of Molecular Evolution , vol.51 , pp. 26-40
    • Zhang, Z.1    Green, B.R.2    Cavalier-Smith, T.3
  • 45
    • 0034910778 scopus 로고    scopus 로고
    • A family of selfish minicircular chromosomes with jumbled chloroplast gene fragments from a dinoflagellate
    • ZHANG Z., CAVALIER-SMITH T. & GREEN B.R. 2001. A family of selfish minicircular chromosomes with jumbled chloroplast gene fragments from a dinoflagellate. Molecular Biology and Evolution 18: 1558-1565.
    • (2001) Molecular Biology and Evolution , vol.18 , pp. 1558-1565
    • Zhang, Z.1    Cavalier-Smith, T.2    Green, B.R.3


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