메뉴 건너뛰기




Volumn 7, Issue 5, 2005, Pages 481-493

Gene expression in Florida red tide dinoflagellate Karenia brevis: Analysis of an expressed sequence tag library and development of DNA microarray

Author keywords

Dinoflagellate; Expressed sequence tag; Florida red tide; Functional genomics; Karenia brevis; Microarray

Indexed keywords

APPROXIMATION THEORY; MOLECULAR BIOLOGY; PROBLEM SOLVING; TIDES;

EID: 17744363400     PISSN: 14362228     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10126-004-4110-6     Document Type: Article
Times cited : (106)

References (42)
  • 2
    • 0001847398 scopus 로고
    • Separation of coding sequences from structural DNA in the dinoflagellate Crypthecodinium cohnii
    • Anderson DM, Grabher A, Herzog M (1992) Separation of coding sequences from structural DNA in the dinoflagellate Crypthecodinium cohnii. Mol Mar Biol Biotech 1, 89-96
    • (1992) Mol Mar Biol Biotech , vol.1 , pp. 89-96
    • Anderson, D.M.1    Grabher, A.2    Herzog, M.3
  • 3
    • 1942444640 scopus 로고    scopus 로고
    • Dinoflgaellate expressed sequence tag data reveal massive transfer of chloroplast genes to the nuclear genome
    • Bachvaroff TS, Concepcion GT, Rogers CR, Herman EM, Delwiche CF (2004) Dinoflgaellate expressed sequence tag data reveal massive transfer of chloroplast genes to the nuclear genome. Protist 155, 65-78
    • (2004) Protist , vol.155 , pp. 65-78
    • Bachvaroff, T.S.1    Concepcion, G.T.2    Rogers, C.R.3    Herman, E.M.4    Delwiche, C.F.5
  • 4
    • 0038477025 scopus 로고    scopus 로고
    • Permanent expression of a cyclin B homologue in the cell cycle of the dinoflagellate Karenia brevis
    • Barbier M, Leighfield T, Soyer-Gobillard MO, Van Dolah FM (2003) Permanent expression of a cyclin B homologue in the cell cycle of the dinoflagellate Karenia brevis. J Eukaryot Micro 50(2), 123-131
    • (2003) J Eukaryot Micro , vol.50 , Issue.2 , pp. 123-131
    • Barbier, M.1    Leighfield, T.2    Soyer-Gobillard, M.O.3    Van Dolah, F.M.4
  • 6
    • 0027332393 scopus 로고
    • Identification and characterization of a type-1 protein phosphatase from the okadaic acid producing marine dinoflagellate, Prorocentrum lima
    • Boland MP, Taylor MFJR, Holmes CFB (1993) Identification and characterization of a type-1 protein phosphatase from the okadaic acid producing marine dinoflagellate, Prorocentrum lima. FEBS Lett 334, 13-17
    • (1993) FEBS Lett , vol.334 , pp. 13-17
    • Boland, M.P.1    Taylor, M.F.J.R.2    Holmes, C.F.B.3
  • 9
    • 0030139580 scopus 로고    scopus 로고
    • Inhibitors of serine/threonine phosphoprotein phosphatases alter circadian properties in Gonyaulax polyedra
    • Comolli J, Taylor W, Rehman J, Hastings JW (1996) Inhibitors of serine/threonine phosphoprotein phosphatases alter circadian properties in Gonyaulax polyedra. Plant Physiol 111, 285-291
    • (1996) Plant Physiol , vol.111 , pp. 285-291
    • Comolli, J.1    Taylor, W.2    Rehman, J.3    Hastings, J.W.4
  • 10
    • 0030950845 scopus 로고    scopus 로고
    • Evidence for reversible tyrosine phosphorylation in the okadaic acid-producting dinoflagellate Prorocentrum lima
    • Dawson JF, Ostergaard HL, Klix H, Boland MP, Haoles CFB (1997) Evidence for reversible tyrosine phosphorylation in the okadaic acid-producting dinoflagellate Prorocentrum lima. J Eukaryot Microbiol 44, 89-95
    • (1997) J Eukaryot Microbiol , vol.44 , pp. 89-95
    • Dawson, J.F.1    Ostergaard, H.L.2    Klix, H.3    Boland, M.P.4    Haoles, C.F.B.5
  • 11
    • 0036124759 scopus 로고    scopus 로고
    • Reexamining aveolate evolution using multiple protein molecular phylogenies
    • Fast NM, Xue L, Bingham S, Keeling P (2002) Reexamining aveolate evolution using multiple protein molecular phylogenies. J Eukaryot Microbiol 491, 30-37
    • (2002) J Eukaryot Microbiol , vol.491 , pp. 30-37
    • Fast, N.M.1    Xue, L.2    Bingham, S.3    Keeling, P.4
  • 13
    • 0002312833 scopus 로고
    • Gymnodinium breve: Ubiquitous in Gulf of Mexico surface waters
    • Proceedings of the Fifth International Conference on Toxic Marine Phytoplankton, Newport, Rhode Island, U.S.A, October 28 -November 1, 1991, Smayda TJ, Shimizu Y, eds. (Amsterdam: Elsevier Science Publishers)
    • Geesey ME, Tester PA (1993) Gymnodinium breve: ubiquitous in Gulf of Mexico surface waters. In: Toxic Phytoplankton Blooms in the Sea, Proceedings of the Fifth International Conference on Toxic Marine Phytoplankton, Newport, Rhode Island, U.S.A, October 28 -November 1, 1991, Smayda TJ, Shimizu Y, eds. (Amsterdam: Elsevier Science Publishers), pp 251-25
    • (1993) Toxic Phytoplankton Blooms in the Sea , pp. 251-325
    • Geesey, M.E.1    Tester, P.A.2
  • 15
    • 0037174868 scopus 로고    scopus 로고
    • A new class of transcription initiation factors, intermediate between TATA box-binding proteins (TBPs) and TBP-like factors (TLFs), is present in the marine unicellular organism, the dinoflagellate Crypthecodinium cohnii
    • Guillebault D, Sasorith S, Derelle E, Wurtz JM, Lozano JC, Bingham S, Tora L, Moreau H (2002) A new class of transcription initiation factors, intermediate between TATA box-binding proteins (TBPs) and TBP-like factors (TLFs), is present in the marine unicellular organism, the dinoflagellate Crypthecodinium cohnii. J Biol Chem 277(43), 40881-40886
    • (2002) J Biol Chem , vol.277 , Issue.43 , pp. 40881-40886
    • Guillebault, D.1    Sasorith, S.2    Derelle, E.3    Wurtz, J.M.4    Lozano, J.C.5    Bingham, S.6    Tora, L.7    Moreau, H.8
  • 16
    • 0344719474 scopus 로고    scopus 로고
    • Putative SNP discovery in interspecific hybrids of catfish by comparative EST analysis
    • He C, Chen L, Simmoms M, Li P, Kim S, Liu ZJ (2003) Putative SNP discovery in interspecific hybrids of catfish by comparative EST analysis. Anim Genet 34, 445-448
    • (2003) Anim Genet , vol.34 , pp. 445-448
    • He, C.1    Chen, L.2    Simmoms, M.3    Li, P.4    Kim, S.5    Liu, Z.J.6
  • 17
    • 0036202550 scopus 로고    scopus 로고
    • Potential indicators of stress response identified by expressed sequences tag analysis of hemocytes and embryos from the American oyster, Crassostrea virginica
    • Jenny M, Ringwood AH, Lacy E, Lewitus AJ, Kempton JW, Gross PS, Warr GW, Chapman RW (2002) Potential indicators of stress response identified by expressed sequences tag analysis of hemocytes and embryos from the American oyster, Crassostrea virginica. Mar Biotechnol 4, 81-93
    • (2002) Mar Biotechnol , vol.4 , pp. 81-93
    • Jenny, M.1    Ringwood, A.H.2    Lacy, E.3    Lewitus, A.J.4    Kempton, J.W.5    Gross, P.S.6    Warr, G.W.7    Chapman, R.W.8
  • 18
    • 0032543590 scopus 로고    scopus 로고
    • Biochemical relationships in the orientation of the autotrophic dinoflagellate Gymnodinium breve under nutrient replete conditions
    • Kamykowski D, Milligan EJ, Reed RE (1998) Biochemical relationships in the orientation of the autotrophic dinoflagellate Gymnodinium breve under nutrient replete conditions. Mar Ecol Prog Ser 167, 105-117
    • (1998) Mar Ecol Prog Ser , vol.167 , pp. 105-117
    • Kamykowski, D.1    Milligan, E.J.2    Reed, R.E.3
  • 19
    • 0342312000 scopus 로고
    • Effects of salinity on synthesis of DNA, acidic polysaccharide and ichthyotoxin in Gymnodinium breve
    • Kim YS, Martin DF (1974) Effects of salinity on synthesis of DNA, acidic polysaccharide and ichthyotoxin in Gymnodinium breve. Phytochemistry 13, 533-538
    • (1974) Phytochemistry , vol.13 , pp. 533-538
    • Kim, Y.S.1    Martin, D.F.2
  • 20
    • 0036306905 scopus 로고    scopus 로고
    • Generation and comparison of EST-derived SSRs and SNPs in barley (Hordeum vulgare L.)
    • Kota R, Kumar VR, Thiel T, Dehmer K J, Graner A. (2001) Generation and comparison of EST-derived SSRs and SNPs in barley (Hordeum vulgare L.). Hereditas 135, 145-151
    • (2001) Hereditas , vol.135 , pp. 145-151
    • Kota, R.1    Kumar, V.R.2    Thiel, T.3    Dehmer, K.J.4    Graner, A.5
  • 21
    • 1842378643 scopus 로고    scopus 로고
    • Early evolution of metazoan serine/threonine and tyrosine kinases: Identification of selected kinases in sponges
    • Kruze M, Muller IM, Muller WG (1997) Early evolution of metazoan serine/threonine and tyrosine kinases: identification of selected kinases in sponges. Mol Biol Evol 14, 1326-1334
    • (1997) Mol Biol Evol , vol.14 , pp. 1326-1334
    • Kruze, M.1    Muller, I.M.2    Muller, W.G.3
  • 22
    • 0030832064 scopus 로고    scopus 로고
    • Structure and organization of the peridinin chlorophyll protein gene in Gonyaulax polyedra
    • Le QH, Markovic P, Hastings JW, Jovine RVM, Morse D (1997) Structure and organization of the peridinin chlorophyll protein gene in Gonyaulax polyedra. Mol Gen Genet 255, 595-604
    • (1997) Mol Gen Genet , vol.255 , pp. 595-604
    • Le, Q.H.1    Markovic, P.2    Hastings, J.W.3    Jovine, R.V.M.4    Morse, D.5
  • 23
    • 0027516422 scopus 로고
    • Molecular cloning and genomic organization of a gene for luciferin-binding protein from the dinoflagellate Gonyaulax polyedra
    • Lee DH, Mittag M, Sczelan S, Morse D, Hastings JW (1993) Molecular cloning and genomic organization of a gene for luciferin-binding protein from the dinoflagellate Gonyaulax polyedra. J Biol Chem 268, 8842-8850
    • (1993) J Biol Chem , vol.268 , pp. 8842-8850
    • Lee, D.H.1    Mittag, M.2    Sczelan, S.3    Morse, D.4    Hastings, J.W.5
  • 24
    • 0036848262 scopus 로고    scopus 로고
    • Evidence for cAMP-dependant protein kinase in the dinoflagellate, Amphidinium operculatum
    • Leighfield TA, Barbier M, Van Dolah FM (2002) Evidence for cAMP-dependant protein kinase in the dinoflagellate, Amphidinium operculatum. Comp Biochem Physiol 133B(3), 317-324
    • (2002) Comp Biochem Physiol , vol.133 B , Issue.3 , pp. 317-324
    • Leighfield, T.A.1    Barbier, M.2    Van Dolah, F.M.3
  • 25
  • 26
    • 0037226442 scopus 로고    scopus 로고
    • Mitogen-activated protein kinase in Pfiesteria piscicida and its growth rate-related expression
    • Lin S, Zhang H (2003) Mitogen-activated protein kinase in Pfiesteria piscicida and its growth rate-related expression. Appl Environ Microbiol 691, 343-349
    • (2003) Appl Environ Microbiol , vol.691 , pp. 343-349
    • Lin, S.1    Zhang, H.2
  • 27
    • 0028409697 scopus 로고
    • Expression and genomic organization of a dinoflagellate gene family
    • Machabee S, Wall L, Morse D (1994) Expression and genomic organization of a dinoflagellate gene family. Plant Mol Biol 25, 23-31
    • (1994) Plant Mol Biol , vol.25 , pp. 23-31
    • Machabee, S.1    Wall, L.2    Morse, D.3
  • 28
    • 8144224376 scopus 로고    scopus 로고
    • Differential responses of stress proteins, antioxidant enzymes, and photosynthetic efficiency to physiological stresses in the Florida red tide dinoflagellate, Karenia brevis
    • Miller-Morey JS, Van Dolah FM (2004) Differential responses of stress proteins, antioxidant enzymes, and photosynthetic efficiency to physiological stresses in the Florida red tide dinoflagellate, Karenia brevis. Comp Biochem Physiol C 1384, 493-505
    • (2004) Comp Biochem Physiol C , vol.1384 , pp. 493-505
    • Miller-Morey, J.S.1    Van Dolah, F.M.2
  • 29
    • 0347356451 scopus 로고    scopus 로고
    • PCP gene family in Symbiodinium from Hippopus hippopus: Low levels of concerted evolution, isoform diversity, and spectral tuning of chromophores
    • Reichman JR, Thomas W, Peter V (2003) PCP gene family in Symbiodinium from Hippopus hippopus: low levels of concerted evolution, isoform diversity, and spectral tuning of chromophores. Mol Biol Evol 20(12), 2143-2154
    • (2003) Mol Biol Evol , vol.20 , Issue.12 , pp. 2143-2154
    • Reichman, J.R.1    Thomas, W.2    Peter, V.3
  • 30
    • 0020135119 scopus 로고
    • Isolation and properties of isolated nuclei from the Florida red tide dinoflagellate Gymnodinium breve
    • Rizzo PD (1982) Isolation and properties of isolated nuclei from the Florida red tide dinoflagellate Gymnodinium breve. J Protozool 29, 217-222
    • (1982) J Protozool , vol.29 , pp. 217-222
    • Rizzo, P.D.1
  • 31
    • 0018473454 scopus 로고
    • RNA synthesis in isolated nuclei of the dinoflagellate Crypthecodinium cohnii
    • Rizzo PJ (1979) RNA synthesis in isolated nuclei of the dinoflagellate Crypthecodinium cohnii. J Protozool 26, 290-294
    • (1979) J Protozool , vol.26 , pp. 290-294
    • Rizzo, P.J.1
  • 32
    • 0030096623 scopus 로고    scopus 로고
    • Rubisco in marine symbiotic dinoflagellates: Form II enzymes in eukaryotic oxygenic phototrophs encoded by a nuclear multigene family
    • Rowan R, Whitney SM, Fowler A, Yellowlees D (1996) Rubisco in marine symbiotic dinoflagellates: form II enzymes in eukaryotic oxygenic phototrophs encoded by a nuclear multigene family. Plant Cell 8, 539-553
    • (1996) Plant Cell , vol.8 , pp. 539-553
    • Rowan, R.1    Whitney, S.M.2    Fowler, A.3    Yellowlees, D.4
  • 33
    • 0031404739 scopus 로고    scopus 로고
    • Characterization and molecular phylogeny of a protein kinase cDNA from the dinoflagellate Gonyaulax
    • Salois P, Morse D (1997) Characterization and molecular phylogeny of a protein kinase cDNA from the dinoflagellate Gonyaulax. J Phycol 33, 1063-1072
    • (1997) J Phycol , vol.33 , pp. 1063-1072
    • Salois, P.1    Morse, D.2
  • 34
    • 0037329370 scopus 로고    scopus 로고
    • Molecular genetic evidence that dinoflagellates belonging to the genus Symbiodinium Freudenthal are haploid
    • Santos SR, Coffroth MA (2003) Molecular genetic evidence that dinoflagellates belonging to the genus Symbiodinium Freudenthal are haploid. Biol Bull 204, 10-20
    • (2003) Biol Bull , vol.204 , pp. 10-20
    • Santos, S.R.1    Coffroth, M.A.2
  • 35
    • 0020962701 scopus 로고
    • Structural DNA and genetically active DNA in dinoflagellate chromosomes
    • Sigee DC (1984) Structural DNA and genetically active DNA in dinoflagellate chromosomes. Biosystems 16, 203-210
    • (1984) Biosystems , vol.16 , pp. 203-210
    • Sigee, D.C.1
  • 37
    • 0033029127 scopus 로고    scopus 로고
    • No evidence for an allelopathic role of okadaic among ciguatera associated dinoflagellates
    • Sugg L, Van Dolah FM (1999) No evidence for an allelopathic role of okadaic among ciguatera associated dinoflagellates. J Phycol 35, 93-108
    • (1999) J Phycol , vol.35 , pp. 93-108
    • Sugg, L.1    Van Dolah, F.M.2
  • 38
    • 0027132735 scopus 로고
    • Characterization of the sequence organization of DNA from the dinoflagellate Heterocapsa pygmaea (Glenodinium sp.)
    • Triplett EL, Govind NS, Roman SJ, Jovine RVM, Prezelin BB (1993) Characterization of the sequence organization of DNA from the dinoflagellate Heterocapsa pygmaea (Glenodinium sp.). Mol Mar Biol Biotechnol 2(4), 239-245
    • (1993) Mol Mar Biol Biotechnol , vol.2 , Issue.4 , pp. 239-245
    • Triplett, E.L.1    Govind, N.S.2    Roman, S.J.3    Jovine, R.V.M.4    Prezelin, B.B.5
  • 39
    • 0033371119 scopus 로고    scopus 로고
    • Diel phasing of the cell cycle in the Florida red tide dinoflagellate, Gymnodinium breve
    • Van Dolah FM, Leighfield TA (1999) Diel phasing of the cell cycle in the Florida red tide dinoflagellate, Gymnodinium breve. J Phycol 35S, 1404-1411
    • (1999) J Phycol , vol.35 S , pp. 1404-1411
    • Van Dolah, F.M.1    Leighfield, T.A.2
  • 40
    • 27644515109 scopus 로고
    • Evidence for a sexual cycle in the Florida red tide dinoflagellate Ptychodiscus brevis (=Gymnodinium breve)
    • Walker LM (1982) Evidence for a sexual cycle in the Florida red tide dinoflagellate Ptychodiscus brevis (=Gymnodinium breve). Bioscience 32, 809-810
    • (1982) Bioscience , vol.32 , pp. 809-810
    • Walker, L.M.1
  • 42
    • 0034627762 scopus 로고    scopus 로고
    • The spindle checkpoint in the dinoflagellate Crypthecodinium cohnii
    • Yeung PKK, New D, Leveson A, Yam C, Poon P, Wong J (2000) The spindle checkpoint in the dinoflagellate Crypthecodinium cohnii. Exp Cell Res 254, 120-129
    • (2000) Exp Cell Res , vol.254 , pp. 120-129
    • Yeung, P.K.K.1    New, D.2    Leveson, A.3    Yam, C.4    Poon, P.5    Wong, J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.