메뉴 건너뛰기




Volumn 124, Issue 1, 2011, Pages 54-74

Development and evaluation of a genomic signature for the prediction and mechanistic assessment of nongenotoxic hepatocarcinogens in the rat

(17)  Fielden, Mark R a   Adai, Alex b   Dunn, Robert T a   Olaharski, Andrew c   Searfoss, George d   Sina, Joe e   Aubrecht, Jiri f   Boitier, Eric g   Nioi, Paul a,e   Auerbach, Scott h   Jacobson kram, David i   Raghavan, Nandini j   Yang, Yi k   Kincaid, Andrew b   Sherlock, Jon l   Chen, Shen Jue m   Car, Bruce m  

g SANOFI   (France)

Author keywords

Biomarkers; Carcinogenesis; In vitro and alternatives; Liver; Methods; Nongenotoxic; Predictive toxicology; Safety evaluation; Systems toxicology; Toxicogenomics

Indexed keywords

BIOLOGICAL MARKER; CARCINOGEN;

EID: 84155187516     PISSN: 10966080     EISSN: 10960929     Source Type: Journal    
DOI: 10.1093/toxsci/kfr202     Document Type: Article
Times cited : (58)

References (45)
  • 1
    • 3242884003 scopus 로고    scopus 로고
    • Prediction of rodent carcinogenesis: an evaluation of prechronic liver lesions as forecasters of liver tumors in NTP carcinogenicity studies
    • Allen, D. G., Pearse, G., Haseman, J. K., and Maronpot, R. R. (2004). Prediction of rodent carcinogenesis: an evaluation of prechronic liver lesions as forecasters of liver tumors in NTP carcinogenicity studies. Toxicol. Pathol. 32, 393-401.
    • (2004) Toxicol. Pathol. , vol.32 , pp. 393-401
    • Allen, D.G.1    Pearse, G.2    Haseman, J.K.3    Maronpot, R.R.4
  • 3
    • 79958296202 scopus 로고    scopus 로고
    • Toxicogenomics and cancer risk assessment: a framework for key event analysis and dose-response assessment for nongenotoxic carcinogens
    • Bercu, J. P., Jolly, R. A., Flagella, K. M., Baker, T. K., Romero, P., and Stevens, J. L. (2010). Toxicogenomics and cancer risk assessment: a framework for key event analysis and dose-response assessment for nongenotoxic carcinogens. Regul. Toxicol. Pharmacol. 58, 369-381.
    • (2010) Regul. Toxicol. Pharmacol. , vol.58 , pp. 369-381
    • Bercu, J.P.1    Jolly, R.A.2    Flagella, K.M.3    Baker, T.K.4    Romero, P.5    Stevens, J.L.6
  • 4
    • 36049017937 scopus 로고    scopus 로고
    • Review of the in vitro and in vivo genotoxicity of dichlorvos
    • Booth, E.. D., Jones, E., and Elliott, B., M. (2007). Review of the in vitro and in vivo genotoxicity of dichlorvos. Regul. Toxicol. Pharmacol. 49, 316-326.
    • (2007) Regul. Toxicol. Pharmacol. , vol.49 , pp. 316-326
    • Booth, E.D.1    Jones, E.2    Elliott, B.M.3
  • 5
    • 59449102286 scopus 로고    scopus 로고
    • Update on genotoxicity and carcinogenicity testing of 472 marketed pharmaceuticals
    • Brambilla, G., and Martelli, A. (2009). Update on genotoxicity and carcinogenicity testing of 472 marketed pharmaceuticals. Mutat. Res. 681, 209-229.
    • (2009) Mutat. Res. , vol.681 , pp. 209-229
    • Brambilla, G.1    Martelli, A.2
  • 6
    • 77953794875 scopus 로고    scopus 로고
    • Pravastatin attenuates carboplatin-induced nephrotoxicity in rodents via peroxisome proliferatoractivated receptor alpha-regulated heme oxygenase-1
    • Chen, H. H., Chen, T. W., and Lin, H. (2010). Pravastatin attenuates carboplatin-induced nephrotoxicity in rodents via peroxisome proliferatoractivated receptor alpha-regulated heme oxygenase-1. Mol. Pharmacol 78, 36-45.
    • (2010) Mol. Pharmacol , vol.78 , pp. 36-45
    • Chen, H.H.1    Chen, T.W.2    Lin, H.3
  • 8
    • 4344595785 scopus 로고    scopus 로고
    • Human carcinogenic risk evaluation: an alternative approach to the two-year rodent bioassay
    • Cohen, S. M. (2004). Human carcinogenic risk evaluation: an alternative approach to the two-year rodent bioassay. Toxicol. Sci. 80, 225-259.
    • (2004) Toxicol. Sci. , vol.80 , pp. 225-259
    • Cohen, S.M.1
  • 9
    • 77952478228 scopus 로고    scopus 로고
    • Evaluation of possible carcinogenic risk to humans based on liver tumors in rodent assays: the two-year bioassay is no longer necessary
    • Cohen, S. M. (2010). Evaluation of possible carcinogenic risk to humans based on liver tumors in rodent assays: the two-year bioassay is no longer necessary. Toxicol. Pathol. 38, 487-501.
    • (2010) Toxicol. Pathol. , vol.38 , pp. 487-501
    • Cohen, S.M.1
  • 10
    • 0242624535 scopus 로고    scopus 로고
    • Predicting the carcinogenic potential of pharmaceuticals in rodents using molecular structural similarity and E-state indices
    • Contrera, J. F., Matthews, E. J., and Daniel Benz, R. (2003). Predicting the carcinogenic potential of pharmaceuticals in rodents using molecular structural similarity and E-state indices. Regul. Toxicol. Pharmacol. 38, 243-259.
    • (2003) Regul. Toxicol. Pharmacol. , vol.38 , pp. 243-259
    • Contrera, J.F.1    Matthews, E.J.2    Daniel Benz, R.3
  • 11
    • 0028902169 scopus 로고
    • Marketed human pharmaceuticals reported to be tumorigenic in rodents
    • Davies, T. S., and Monro, A. (1995). Marketed human pharmaceuticals reported to be tumorigenic in rodents. J. Amer. Coll. Toxicol. 14, 90-107.
    • (1995) J. Amer. Coll. Toxicol. , vol.14 , pp. 90-107
    • Davies, T.S.1    Monro, A.2
  • 12
    • 0035437164 scopus 로고    scopus 로고
    • The Hox cofactor and proto-oncogene Pbx1 is required for maintenance of definitive hematopoiesis in the fetal liver
    • DiMartino, J. F., Selleri, L., Traver, D., Firpo, M. T., Rhee, J., Warnke, R., O'Gorman, S., Weissman, I. L., and Cleary, M. L. (2001). The Hox cofactor and proto-oncogene Pbx1 is required for maintenance of definitive hematopoiesis in the fetal liver. Blood 98, 618-626.
    • (2001) Blood , vol.98 , pp. 618-626
    • DiMartino, J.F.1    Selleri, L.2    Traver, D.3    Firpo, M.T.4    Rhee, J.5    Warnke, R.6    O'Gorman, S.7    Weissman, I.L.8    Cleary, M.L.9
  • 13
    • 0036230059 scopus 로고    scopus 로고
    • Prediction of rodent nongenotoxic carcinogenesis: evaluation of biochemical and tissue changes in rodents following exposure to nine nongenotoxic NTP carcinogens
    • Elcombe, C. R., Odum, J., Foster, J. R., Stone, S., Hasmall, S., Soames, A. R., Kimber, I., and Ashby, J. (2002). Prediction of rodent nongenotoxic carcinogenesis: evaluation of biochemical and tissue changes in rodents following exposure to nine nongenotoxic NTP carcinogens. Environ. Health Perspect. 110, 363-375.
    • (2002) Environ. Health Perspect. , vol.110 , pp. 363-375
    • Elcombe, C.R.1    Odum, J.2    Foster, J.R.3    Stone, S.4    Hasmall, S.5    Soames, A.R.6    Kimber, I.7    Ashby, J.8
  • 14
    • 37149025669 scopus 로고    scopus 로고
    • Prediction of a carcinogenic potential of rat hepatocarcinogens using toxicogenomics analysis of short-term in vivo studies
    • Ellinger-Ziegelbauer, H., Gmuender, H., Bandenburg, A., and Ahr, H. J. (2008). Prediction of a carcinogenic potential of rat hepatocarcinogens using toxicogenomics analysis of short-term in vivo studies. Mutat. Res. 637, 23-39.
    • (2008) Mutat. Res. , vol.637 , pp. 23-39
    • Ellinger-Ziegelbauer, H.1    Gmuender, H.2    Bandenburg, A.3    Ahr, H.J.4
  • 15
    • 1642504808 scopus 로고    scopus 로고
    • Characteristic expression profiles induced by genotoxic carcinogens in rat liver
    • Ellinger-Ziegelbauer, H., Stuart, B., Wahle, B., Bomann, W., and Ahr, H. J. (2004). Characteristic expression profiles induced by genotoxic carcinogens in rat liver. Toxicol. Sci. 77, 19-34.
    • (2004) Toxicol. Sci. , vol.77 , pp. 19-34
    • Ellinger-Ziegelbauer, H.1    Stuart, B.2    Wahle, B.3    Bomann, W.4    Ahr, H.J.5
  • 16
    • 34547881497 scopus 로고    scopus 로고
    • A gene expression biomarker provides early prediction and mechanistic assessment of hepatic tumor induction by nongenotoxic chemicals
    • Fielden, M. R., Brennan, R., and Gollub, J. (2007). A gene expression biomarker provides early prediction and mechanistic assessment of hepatic tumor induction by nongenotoxic chemicals. Toxicol. Sci. 99, 90-100.
    • (2007) Toxicol. Sci. , vol.99 , pp. 90-100
    • Fielden, M.R.1    Brennan, R.2    Gollub, J.3
  • 18
    • 20544448220 scopus 로고    scopus 로고
    • Supplement to the Carcinogenic Potency Database (CPDB): results of animal bioassays published in the general literature through 1997 and by the National Toxicology Program in 1997-1998
    • Gold, L. S., Manley, N. B., Slone, T. H., Rohrbach, L., and Garfinkel, G. B. (2005). Supplement to the Carcinogenic Potency Database (CPDB): results of animal bioassays published in the general literature through 1997 and by the National Toxicology Program in 1997-1998. Toxicol. Sci. 85, 747-808.
    • (2005) Toxicol. Sci. , vol.85 , pp. 747-808
    • Gold, L.S.1    Manley, N.B.2    Slone, T.H.3    Rohrbach, L.4    Garfinkel, G.B.5
  • 20
    • 0037648908 scopus 로고    scopus 로고
    • A medium-term rat liver bioassay for rapid in vivo detection of carcinogenic potential of chemicals
    • Ito, N., Tamano, S., and Shirai, T. (2003). A medium-term rat liver bioassay for rapid in vivo detection of carcinogenic potential of chemicals. Cancer Sci. 94, 3-8.
    • (2003) Cancer Sci , vol.94 , pp. 3-8
    • Ito, N.1    Tamano, S.2    Shirai, T.3
  • 21
    • 27644441505 scopus 로고    scopus 로고
    • Prediction of 2-year carcinogenicity study results for pharmaceutical products: how are we doing?
    • Jacobs, A. (2005). Prediction of 2-year carcinogenicity study results for pharmaceutical products: how are we doing? Toxicol. Sci. 88, 18-23.
    • (2005) Toxicol. Sci. , vol.88 , pp. 18-23
    • Jacobs, A.1
  • 22
    • 5744240625 scopus 로고    scopus 로고
    • Human carcinogenic risk evaluation, part III: assessing cancer hazard and risk in human drug development
    • Jacobs, A., and Jacobson-Kram, D. (2004). Human carcinogenic risk evaluation, part III: assessing cancer hazard and risk in human drug development. Toxicol. Sci. 81, 260-262.
    • (2004) Toxicol. Sci. , vol.81 , pp. 260-262
    • Jacobs, A.1    Jacobson-Kram, D.2
  • 23
    • 21544473568 scopus 로고    scopus 로고
    • Evaluation of the ability of a battery of three in vitro genotoxicity tests to discriminate rodent carcinogens and non-carcinogens I. Sensitivity, specificity and relative predictivity
    • Kirkland, D., Aardema, M., Henderson, L., and Muller, L. (2005). Evaluation of the ability of a battery of three in vitro genotoxicity tests to discriminate rodent carcinogens and non-carcinogens I. Sensitivity, specificity and relative predictivity. Mutat. Res. 584, 1-256.
    • (2005) Mutat. Res. , vol.584 , pp. 1-256
    • Kirkland, D.1    Aardema, M.2    Henderson, L.3    Muller, L.4
  • 24
    • 0027436186 scopus 로고
    • Predicting rodent carcinogenicity of halogenated hydrocarbons by in vivo biochemical parameters
    • Kitchin, K. T., Brown, J. L., and Kulkarni, A. P. (1993). Predicting rodent carcinogenicity of halogenated hydrocarbons by in vivo biochemical parameters. Teratog. Carcinog. Mutagen. 13, 167-184.
    • (1993) Teratog. Carcinog. Mutagen. , vol.13 , pp. 167-184
    • Kitchin, K.T.1    Brown, J.L.2    Kulkarni, A.P.3
  • 25
    • 0028238067 scopus 로고
    • Complementarity of genotoxic and nongenotoxic predictors of rodent carcinogenicity
    • Kitchin, K. T., Brown, J. L., and Kulkarni, A. P. (1994). Complementarity of genotoxic and nongenotoxic predictors of rodent carcinogenicity. Teratog. Carcinog. Mutagen. 14, 83-100.
    • (1994) Teratog. Carcinog. Mutagen. , vol.14 , pp. 83-100
    • Kitchin, K.T.1    Brown, J.L.2    Kulkarni, A.P.3
  • 26
    • 0028917261 scopus 로고
    • Learning rules to predict rodent carcinogenicity of nongenotoxic chemicals
    • Lee, Y., Buchanan, B. G., Mattison, D. M., Klopman, G., and Rosenkranz, H. S. (1995). Learning rules to predict rodent carcinogenicity of nongenotoxic chemicals. Mutat. Res. 328, 127-149.
    • (1995) Mutat. Res. , vol.328 , pp. 127-149
    • Lee, Y.1    Buchanan, B.G.2    Mattison, D.M.3    Klopman, G.4    Rosenkranz, H.S.5
  • 27
    • 1842458463 scopus 로고    scopus 로고
    • Relevance of animal carcinogenesis findings to human cancer predictions and prevention
    • Maronpot, R. R., Flake, G., and Huff, J. (2004). Relevance of animal carcinogenesis findings to human cancer predictions and prevention. Toxicol. Pathol. 32(Suppl. 1), 40-48.
    • (2004) Toxicol. Pathol. , vol.32 , Issue.SUPPL. 1 , pp. 40-48
    • Maronpot, R.R.1    Flake, G.2    Huff, J.3
  • 28
    • 0034752076 scopus 로고    scopus 로고
    • The syrian hamster embryo (SHE) cell transformation assay: review of the methods and results
    • Mauthe, R. J., Gibson, D. P., Bunch, R. T., and Custer, L. (2001). The syrian hamster embryo (SHE) cell transformation assay: review of the methods and results. Toxicol. Pathol. 29(Suppl.), 138-146.
    • (2001) Toxicol. Pathol. , vol.29 , Issue.SUPPL. , pp. 138-146
    • Mauthe, R.J.1    Gibson, D.P.2    Bunch, R.T.3    Custer, L.4
  • 29
    • 40949147430 scopus 로고    scopus 로고
    • Conflicting views on chemical carcinogenesis arising from the design and evaluation of rodent carcinogenicity studies
    • Melnick, R. L., Thayer, K. A., and Bucher, J. R. (2008). Conflicting views on chemical carcinogenesis arising from the design and evaluation of rodent carcinogenicity studies. Environ. Health Perspect. 116, 130-135.
    • (2008) Environ. Health Perspect. , vol.116 , pp. 130-135
    • Melnick, R.L.1    Thayer, K.A.2    Bucher, J.R.3
  • 30
    • 17644419635 scopus 로고    scopus 로고
    • Characterization of an acute molecular marker of nongenotoxic rodent hepatocarcinogenesis by gene expression profiling in a long term clofibric acid study
    • Michel, C., Roberts, R. A., Desdouets, C., Isaacs, K. R., and Boitier, E. (2005). Characterization of an acute molecular marker of nongenotoxic rodent hepatocarcinogenesis by gene expression profiling in a long term clofibric acid study. Chem. Res. Toxicol. 18, 611-618.
    • (2005) Chem. Res. Toxicol. , vol.18 , pp. 611-618
    • Michel, C.1    Roberts, R.A.2    Desdouets, C.3    Isaacs, K.R.4    Boitier, E.5
  • 31
    • 0031471369 scopus 로고    scopus 로고
    • Genotoxic activity of praziquantel
    • Montero, R., and Ostrosky, P. (1997). Genotoxic activity of praziquantel. Mutat Res 387, 123-139.
    • (1997) Mutat Res , vol.387 , pp. 123-139
    • Montero, R.1    Ostrosky, P.2
  • 33
    • 55549087526 scopus 로고    scopus 로고
    • Prediction of non-genotoxic carcinogenesis in rats using changes in gene expression following acute dosing
    • Nioi, P., Pardo, I.. D., Sherratt, P.. J., Fielden, M.. R., Gollub, J., Nie, A., and Snyder, R. D. (2008). Prediction of non-genotoxic carcinogenesis in rats using changes in gene expression following acute dosing. Chem. Biol. Interact. 176, 252-260.
    • (2008) Chem. Biol. Interact. , vol.176 , pp. 252-260
    • Nioi, P.1    Pardo, I.D.2    Sherratt, P.J.3    Fielden, M.R.4    Gollub, J.5    Nie, A.6    Snyder, R.D.7
  • 34
    • 0023090957 scopus 로고
    • Placental glutathione S-transferase (GST-P) as a new marker for hepatocarcinogenesis: in vivo short-term screening for hepatocarcinogens
    • Tatematsu, M., Tsuda, H., Shirai, T., Masui, T., and Ito, N. (1987). Placental glutathione S-transferase (GST-P) as a new marker for hepatocarcinogenesis: in vivo short-term screening for hepatocarcinogens. Toxicol. Pathol. 15, 60-68.
    • (1987) Toxicol. Pathol. , vol.15 , pp. 60-68
    • Tatematsu, M.1    Tsuda, H.2    Shirai, T.3    Masui, T.4    Ito, N.5
  • 35
    • 34447555919 scopus 로고    scopus 로고
    • A method to integrate benchmark dose estimates with genomic data to assess the functional effects of chemical exposure
    • Thomas, R. S., Allen, B. C., Nong, A., Yang, L., Bermudez, E., Clewell, H. J., III., and Andersen, M. E. (2007). A method to integrate benchmark dose estimates with genomic data to assess the functional effects of chemical exposure. Toxicol. Sci. 98, 240-248.
    • (2007) Toxicol. Sci. , vol.98 , pp. 240-248
    • Thomas, R.S.1    Allen, B.C.2    Nong, A.3    Yang, L.4    Bermudez, E.5    Clewell III, H.J.6    Andersen, M.E.7
  • 36
    • 74949106867 scopus 로고    scopus 로고
    • Use of shortterm transcriptional profiles to assess the long-term cancer-related safety of environmental and industrial chemicals
    • Thomas, R. S., Bao, W., Chu, T. M., Bessarabova, M., Nikolskaya, T., Nikolsky, Y., Andersen, M. E., and Wolfinger, R. D. (2009). Use of shortterm transcriptional profiles to assess the long-term cancer-related safety of environmental and industrial chemicals. Toxicol. Sci 112, 311-321.
    • (2009) Toxicol. Sci , vol.112 , pp. 311-321
    • Thomas, R.S.1    Bao, W.2    Chu, T.M.3    Bessarabova, M.4    Nikolskaya, T.5    Nikolsky, Y.6    Andersen, M.E.7    Wolfinger, R.D.8
  • 40
    • 35448951406 scopus 로고    scopus 로고
    • Nonclinical safety evaluation of muraglitazar, a novel PPARalpha/gamma agonist
    • Waites, C. R., Dominick, M. A., Sanderson, T. P., and Schilling, B. E. (2007). Nonclinical safety evaluation of muraglitazar, a novel PPARalpha/gamma agonist. Toxicol. Sci. 100, 248-258.
    • (2007) Toxicol. Sci. , vol.100 , pp. 248-258
    • Waites, C.R.1    Dominick, M.A.2    Sanderson, T.P.3    Schilling, B.E.4
  • 41
    • 37449019721 scopus 로고    scopus 로고
    • Value of rodent carcinogenesis bioassays
    • Ward, J. M. (2008). Value of rodent carcinogenesis bioassays. Toxicol. Appl. Pharmacol. 226, 212.
    • (2008) Toxicol. Appl. Pharmacol. , vol.226 , pp. 212
    • Ward, J.M.1
  • 42
    • 78649318364 scopus 로고    scopus 로고
    • Characterizing and predicting carcinogenicity and mode of action using conventional and toxicogenomics methods
    • Waters, M. D., Jackson, M., and Lea, I. (2010). Characterizing and predicting carcinogenicity and mode of action using conventional and toxicogenomics methods. Mutat. Res. 705, 184-200.
    • (2010) Mutat. Res. , vol.705 , pp. 184-200
    • Waters, M.D.1    Jackson, M.2    Lea, I.3
  • 43
    • 0029764924 scopus 로고    scopus 로고
    • D-limonene mechanistic data and risk assessment: absolute species-specific cytotoxicity, enhanced cell proliferation, and tumor promotion
    • Whysner, J., and Williams, G. M. (1996a). D-limonene mechanistic data and risk assessment: absolute species-specific cytotoxicity, enhanced cell proliferation, and tumor promotion. Pharmacol. Ther. 71, 127-136.
    • (1996) Pharmacol. Ther. , vol.71 , pp. 127-136
    • Whysner, J.1    Williams, G.M.2
  • 44
    • 0029769328 scopus 로고    scopus 로고
    • Saccharin mechanistic data and risk assessment: urine composition, enhanced cell proliferation, and tumor promotion
    • Whysner, J., and Williams, G. M. (1996b). Saccharin mechanistic data and risk assessment: urine composition, enhanced cell proliferation, and tumor promotion. Pharmacol. Ther. 71, 225-252.
    • (1996) Pharmacol. Ther. , vol.71 , pp. 225-252
    • Whysner, J.1    Williams, G.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.