Interactions among flower-size QTL of Mimulus guttatus are abundant but highly variable in nature

Genetics

Volumn 189, Issue 4, 2011, Pages 1461-1471

  Kelly, John K ^a   Mojica, Julius P ^a  

^a UNIVERSITY OF KANSAS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARTICLE; EPISTASIS; FLOWER; GENE LOCUS; GENETIC POLYMORPHISM; GENOTYPE; MIMULUS; MIMULUS GUTTATUS; NATURAL SCIENCE; NONHUMAN; PHENOTYPE; PISTIL; PRIORITY JOURNAL; QUANTITATIVE TRAIT LOCUS;

EPISTASIS, GENETIC; FLOWERS; MIMULUS; QUANTITATIVE TRAIT LOCI;

EID: 83455176958     PISSN: 00166731     EISSN: 19432631     Source Type: Journal    
DOI: 10.1534/genetics.111.132423     Document Type: Article

References (68)

1. Arathi, H. S., and J. K. Kelly, 2004 Corolla morphology facilitates both autogamy and bumblebee pollination in Mimulus guttatus. Int. J. Plant Sci. 165: 1039-1045.
2. Bateson, W., 1909 Mendel's Principles of Heredity. Cambridge University Press, Cambridge, UK.
3. Bodbyl Roels, S. A., and J. K. Kelly, 2011 Rapid evolution caused by pollinator loss in Mimulus guttatus. Evolution 65: 2541-2552.
4. Bradshaw, H. D., and D. W. Schemske, 2003 Allele substitution at a flower colour locus produces a pollinator shift in monkeyflowers. Nature 426: 176-178.
5. Brock, M. T., J. M. Dechaine, F. L. Iniguez-Luy, J. N. Maloof, J. R. Stinchcombe et al., 2010 Floral genetic architecture: an examination of QTL architecture underlying floral (Co)variation across environments. Genetics 186: 1451-1465.
6. Bulmer, M. G., 1980 The Mathematical Theory of Quantitative Genetics. Clarendon Press, Oxford.
7. Burch, C. L., and L. Chao, 2000 Evolvability of an RNA virus is determined by its mutational neighbourhood. Nature 406: 625-632.
8. Burton, R. S., P. D. Rawson, and S. Edmands, 1999 Genetic architecture of physiological phenotypes: empirical evidence for coadapted gene complexes. Am. Zool. 39: 451-462.
9. Butcher, D., 1995 Muller's ratchet, epistasis and mutational effects. Genetics 141: 431-437.
10. Carlborg, O., and C. S. Haley, 2004 Epistasis: Too often neglected in complex trait studies? Nat. Rev. Genet. 5: 618-625.
11. Carr, D. E., and C. B. Fenster, 1994 Levels of genetic variation and covariation for Mimulus (Scrophulariaceae) floral traits. Heredity 72: 606-618.
12. Chen, Y., D. B. Carlini, J. F. Baines, J. Parsch, J. M. Braverman et al., 1999 RNA secondary structure and compensatory evolution. Genes Genet. Syst. 74: 271-286.
13. Cheverud, J. M., 2000 Detecting epistasis among quantitative trait loci, pp. 58-81 in Epistasis and the Evolutionary Process, edited by J. B.Wolf, E. D. Brodie, and M. J. Wade. Oxford University Press, New York.
14. Clark, A. G., and L. Wang, 1997 Epistasis in measured genotypes: Drosophila P-element insertions. Genetics 147: 157-163.
15. Crow, J. F., 2010 On epistasis: why it is unimportant in polygenic directional selection. Philos. Trans. R. Soc. B Biol. Sci. 365: 1241-1244.
16. Crow, J. F., and M. Kimura, 1970 An Introduction to Population Genetics Theory. Harper & Row, New York.
17. De Brito, R. A., L. S. Pletscher, and J. M. Cheverud, 2005 The evolution of genetic architecture. I. Diversification of genetic backgrounds by genetic drift. Evolution 59: 2333-2342.
18. Demuth, J. P., and M. J. Wade, 2007 Population differentiation in the beetle Tribolium castaneum. I. Genetic architecture. Evolution 61: 494-509.
19. de Visser, J. A. G. M., R. F. Hoekstra, and H. van den Ende, 1997 Test of interaction between genetic markers that affect fitness in Aspergillus niger. Evolution 51: 1499-1505.
20. Elena, S. F., and R. E. Lenski, 1997 Test of synergistic interactions among deleterious mutations in bacteria. Nature 390: 395-398.
21. Elena, S. F., R. V. Sole, and J. Sardanyes, 2010 Simple genomes, complex interactions: epistasis in RNA virus. Chaos 20: 12.
22. Elnaccash, T. W., and S. J. Tonsor, 2010 Something old and something new: wedding recombinant inbred lines with traditional line cross analysis increases power to describe gene interactions. PLoS ONE 5: e10200.
23. Eshed, Y., and D. Zamir, 1996 Less-than-additive epistatic interactions of quantitative trait loci in tomato. Genetics 143: 1807-1817.
24. Fenster, C. B., and L. F. Galloway, 2000 Population differentiation in an annual legume: genetic architecture. Evolution 54: 1157-1172.
25. Fenster, C. B., and K. Ritland, 1994 Quantitative genetics of mating system divergence in the yellow monkeyflower species complex. Heredity 73: 422-435.
26. Fishman, L., and J. H. Willis, 2008 Pollen limitation and natural selection on floral characters in the yellow monkeyflower, Mimulus guttatus. New Phytol. 177: 802-810.
27. Fishman, L., A. J. Kelly, and J. H. Willis, 2002 Minor quantitative trait loci underlie floral traits associated with mating system divergence in Mimulus. Evolution 56: 2138-2155.
28. Fishman, L., J. Aagaard, and J. C. Tuthill, 2008 Toward the evolutionary genomics of gametophytic divergence: patterns of transmission ratio distortion in monkeyflower (Mimulus) hybrids reveal a complex genetic basis for conspecific pollen precedence. Evolution 62: 2958-2970.
29. Fuller, W. A., 1987 Measurement Error Models. John Wiley & Sons, New York.
30. Gavrilets, S., and J. Gravner, 1997 Percolation on the fitness hypercube and the evolution of reproductive isolation. J. Theor. Biol. 184: 51-64.
31. Hallander, J., and P. Waldmann, 2007 The effect of non-additive genetic interactions on selection in multi-locus genetic models. Heredity 98: 349-359.
32. Hansen, T. F., 2006 The evolution of genetic architecture. Annu. Rev. Ecol. Evol. Syst. 37: 123-157.
33. Hard, J. J., W. E. Bradshaw, and C. M. Holzapfel, 1992 Epistasis and the genetic divergence of photoperiodism between populations of the pitcher-plant mosquito, Wyeomyia smithii. Genetics 131: 389-396.
34. Holm, S., 1979 A simple sequentially rejective multiple test procedure. Scand. J. Stat. 6: 65-70.
35. Kelly, J. K., 2005 Epistasis in monkeyflowers. Genetics 171: 1917-1931.
36. Kelly, J. K., 2008 Testing the rare alleles model of quantitative variation by artificial selection. Genetica 132: 187-198.
37. Kelly, J. K., and H. S. Arathi, 2003 Inbreeding and the genetic variance of floral traits in Mimulus guttatus. Heredity 90: 77-83.
38. Kelly, J. K., A. Rasch, and S. Kalisz, 2002 A method to estimate pollen viability from pollen size variation. Am. J. Bot. 89: 1021-1023.
39. Kondrashov, A. S., 1988 Deleterious mutations and the evolution of sexual reproduction. Nature 336: 435-440.
40. Kroymann, J., and T. Mitchell-Olds, 2005 Epistasis and balanced polymorphism influencing quantitative trait variation. Nature 435: 95-98.
41. Latta, R. G., K. M. Gardner, and D. A. Staples, 2010 Quantitative trait locus mapping of genes under selection across multiple years and sites in Avena barbata: epistasis, pleiotropy, and genotype- by-environment interactions. Genetics 185: 375-385.
42. Lee, Y. W., 2009 Genetic analysis of standing variation for floral morphology and fitness components in a natural population of Mimulus guttatus (common monkeyflower). Ph.D. Thesis, Duke University, Durham, NC.
43. Levin, B. R., M. Lipsitch, V. Perrot, S. Schrag, R. Antia et al., 1997 The population genetics of antibiotic resistance. Clin. Infect. Dis. 24: S9-S16.
44. Li, Z., S. R. M. Pinson, W. D. Park, A. H. Paterson, and J. W. Stansel, 1997 Epistasis for three grain yield components in rice (Oryza sativa L.). Genetics 145: 453-465.
45. Mojica, J. P., and J. K. Kelly, 2010 Viability selection prior to trait expression is an essential component of natural selection. Proc. Biol. Sci. 277: 2945-2950.
46. Montooth, K. L., J. H. Marden, and A. G. Clark, 2003 Mapping determinants of variation in energy metabolism, respiration and flight in Drosophila. Genetics 165: 623-635.
47. Moore, F. B. G., D. E. Rozen, and R. E. Lenski, 2000 Pervasive compensatory adaptation in Escherichia coli. Proc. Biol. Sci. 267: 515-522.
48. Moyle, L. C., and T. Nakazato, 2009 Complex epistasis for Dobzhansky-Muller hybrid incompatibility in Solanum. Genetics 181: 347-351.
49. Muir, C., and L. Moyle, 2009 Antagonistic epistasis for ecophysiological trait differences between Solanum species. New Phytol. 183: 789-802.
50. Otto, S. P., and M. W. Feldman, 1997 Deleterious mutations, variable epistatic interactions, and the evolution of recombination. Theor. Popul. Biol. 51: 134-147.
51. Palopoli, M. F., and C. I. Wu, 1994 Genetics of hybrid male sterility between Drosophila sibling species: a complex web of epistasis is revealed in interspecific studies. Genetics 138: 329-341.
52. Phillips, P. C., S. P. Otto, and M. C. Whitlock, 2000 Beyond the average: the evolutionary importance of gene interactions and variability of epistatic effects, pp. 20-38 in Epistasis and the Evolutionary Process, edited by J. B. Wolf, E. D. Brodie, and M. J. Wade. Oxford University Press, Oxford.
53. Poelwijk, F. J., D. J. Kiviet, D. M. Weinreich, and S. J. Tans, 2007 Empirical fitness landscapes reveal accessible evolutionary paths. Nature 445: 383-386.
54. Provine, W. B., 1971 Origins of Theoretical Population Genetics. University of Chicago Press, Chicago.
55. Ritland, C., and K. Ritland, 1989 Variation of sex allocation among 8 taxa of the Mimulus guttatus species complex (Scrophulariaceae). Am. J. Bot. 76: 1731-1739.
56. Routman, E. J., and J. M. Cheverud, 1997 Gene effects on a quantitative trait: two-locus epistatic effects measured at microsatellite markers and at estimated QTL. Evolution 51: 1654-1662.
57. Schrag, S. J., V. Perrot, and B. R. Levin, 1997 Adaptation to the fitness costs of antibiotic resistance in Escherichia coli. Proc. R. Soc. Lond. B Biol. Sci. 264: 1287-1291.
58. Scoville, A., Y. W. Lee, J. H. Willis, and J. K. Kelly, 2009 Contribution of chromosomal polymorphisms to the Gmatrix of Mimulus guttatus. New Phytol. 183: 803-815.
59. Scoville, A. G., Y. W. Lee, J. H. Willis, and J. K. Kelly, 2011 Explaining the heritability of an ecologically significant trait in terms of individual quantitative trait loci. Biol. Lett. (in press).
60. Templeton, A. R., 2000 Epistasis and complex traits, pp. 41-57 in Epistasis and the Evolutionary Process, edited by J. B. Wolf, E. D. Brodie, and M. J. Wade. Oxford University Press, Oxford.
61. Vallejo-Marin, M., and S. C. H. Barrett, 2009 Modification of flower architecture during early stages in the evolution of selffertilization. Ann. Bot. 103: 951-962.
62. Vickery, R. K., 1978 Case studies in the evolution of species complexes in Mimulus. Evol. Biol. 11: 405-507.
63. Wade, M. J., 2000 Epistasis as a genetic constraint within populations and an accelerant of adaptive divergence among them, pp213-231. in Epistasis and the Evolutionary Process, edited by J. B. Wolf, E. D. Brodie, and M. J. Wade. Oxford University Press, Oxford.
64. Weinreich, D. M., R. A. Watson, and L. Chao, 2005 Perspective: sign epistasis and genetic constraint on evolutionary trajectories. Evolution 59: 1165-1174.
65. Willis, J. H., 1996 Measures of phenotypic selection are biased by partial inbreeding. Evolution 50: 1501-1511.
66. Willis, J. H., 1999 Inbreeding load, average dominance, and the mutation rate for mildly deleterious alleles in Mimulus guttatus. Genetics 153: 1885-1898.
67. Wright, S., 1932 The roles of mutation, inbreeding, crossbreeding and selection in evolution, pp. 356-366 in Proceedings of the Sixth International Congress of Genetics, Vol. I (1968), edited by D. F. Jones. Genetics Society of America, Bethesda, MD.
68. Wu, C. A., D. B. Lowry, A.M. Cooley, K. M. Wright, Y.W. Lee et al., 2008 Mimulus is an emerging model system for the integration of ecological and genomic studies. Heredity 100: 220-230.