Epistasis for three grain yield components in rice (Oryza sativa L.)

Genetics

Volumn 145, Issue 2, 1997, Pages 453-465

  Li, Zhikang ^a   Pinson, Shannon R M ^b   Park, William D ^a   Paterson, Andrew H ^a   Stansel, James W ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

EPISTASIS; GENE LOCUS; GENE MAPPING; GENOME; NONHUMAN; PRIORITY JOURNAL; PROGENY; QUANTITATIVE TRAIT; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; REVIEW; RICE;

ADAPTATION, PHYSIOLOGICAL; CEREALS; EPISTASIS, GENETIC; ORYZA SATIVA; VARIATION (GENETICS);

JAPONICA; ORYZA SATIVA;

EID: 0031022245     PISSN: 00166731     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review

References (62)

1. ALLARD, R. W., 1988 Future directions in plant population genetics, evolution and breeding, pp. 1-19 in Plant Population Genetics and Germplasm Resources, edited by A. H. D. BROWN, M. T. CLEGG, A. L. KAHLER and B. S. WEIR. Sinauer Associates Inc., Sunderland, MA.
2. ANTHONY, D. L., S. L. MULLANEY, L. A. REID, J. D. FRY, C. H. LANGLEY et al., 1995 High resolution mapping of genetic factors affecting abdominal bristle number in Drosophila melanogaster. Genetics 139: 1273-1291.
3. CABOT, E. L., A. W. DAVIS, N. A. JOHNSON and C. I. WU, 1994 Genetics of reproductive isolation in the Drosophila simulans clade: complex epistasis underlying hybrid male sterility. Genetics 137: 175-189.
4. CARSON, H. L., and A. R. TEMPLETON, 1984 Genetic revolutions in relation to speciation phenomena: the founding of new populations. Annu. Rev. Ecol. Syst. 15: 97-131.
5. CHANG, T. T., 1975 Exploration and survey in rice, pp. 159-165 in Crop Genetic Resources for Today and Tomorrow, edited by O. H. FRANKEL and J. G. HAWKES. Cambridge University Press, Cambridge.
6. CLARK, A. G., 1987 A test of multilocus interaction in Drosophila melanogaster. Am. Nat. 130: 283-299.
7. CLARK, A. G., 1991 Mutation-selection balance and metabolic control theory. Genetics 129: 909-923.
8. COCKERHAM, C. C., and Z. B. ZENG, 1996 Design III with marker loci. Genetics 143: 1437-1456.
9. DAVIS, A. W., E. G. NOONBERG and C. I. WU, 1994 Evidence for complex gene interactions between conspecific chromosomes underlying hybrid female sterility in the Drosophila simulans clade. Genetics 137: 191-199.
10. DEVINCENTE, M. C., and S. D. TANKSLEY, 1993 QTL analysis of transgressive segregation in an interspecific tomato cross. Genetics 134: 585-596.
11. DOEBLEY, J., A. STEC and C. GUSTUS, 1995 teosinte branchedl and the origin of maize: evidence for epistasis and the evolution of dominance. Genetics 141: 333-346.
12. EDWARDS, M. D., C. W. STUBER and J. F. WENDEL, 1987 Molecular-marker-facilitated investigations of quantitative-trait loci in maize. I. Numbers, genomic distribution and types of gene action. Genetics 116: 113-125.
13. EDWARDS, M. D., T. HELENTJARIS, S. WRIGHT and C. W. STUBER, 1992 Molecular-marker-facilitated investigations of quantitative trait loci in maize. 4. Analysis based on genome saturation with isozyme and restriction fragment length polymorphism markers. Theor. Appl. Genet. 83: 765-774.
14. FALCONER, D. S., 1981 Introduction to Quantitative Genetics, Ed. 2. Longman Press, New York.
15. FATOKUN, C. A., D. I. MENANCIO-HAUTEA,D. DANESH and N. D. YOUNG, 1992 Evidence for orthologous seed weight genes in cowpea and mung bean based on RFLP mapping. Genetics 132: 841-846.
16. FREUND, E. J., 1971 Mathematical Statistics, Ed. 2. Prentice-Hall, Inc., Englewood Cliffs, NJ.
17. GAVRILETS, S., and G. DE JONG, 1993 Pleiotropic models of polygenic variation, stabilization selection, and epistasis. Genetics 134: 609-625.
18. GEORGES, M., D. NIELSON, M. MACKINNON, A. MISHRA, R. OKIMOTO et al., 1995 Mapping quantitative trait loci contributing milk production in dairy cattle by exploiting progeny testing. Genetics 139: 907-920.
19. GRAYBILL, F. A., 1976 Theory and Application of the Linear Model. Wadsworth and Brooks/Cole, Advanced Books and Software, Pacific Grove, CA.
20. GILLESPIE, J., 1978 A general model for enzyme variation in natural populations. V. The SAS-CFF model. Theor. Pop. Biol. 14: 1-45.
21. HARLAN, J. R., 1969 Evolutionary dynamics of plant domestication. Jap. J. Gene. 44(Suppl.1): 337-343.
22. HEDRICK, P. W., 1983 Genetics of Populations. Jones and Bartlett Publishers, Inc. Boston.
23. HORVAT, S., and J. F. MEDRANO, 1995 Interval mapping of high growth (hg), a major locus that increases weight gain in mice. Genetics 139: 1737-1748.
24. JAIN, S. K., and D. R. MARSHALL, 1967 Population studies in predominantly self-pollinated species. X. Variation in natural populations of Avena fatua and A. barbata. Am. Nat. 101: 19-33.
25. KIMURA, M., 1971 Theoretical Aspects of Population Genetics. Princeton University Press, Princeton, NJ.
26. KINOSHITA, T., and N. SHINBASHI, 1982 Identification of dwarf genes and their character expression in the isogenic background. Jpn. J. Breed. 32: 219-231.
27. KOWALSKI, S. P., T. H. LAN, A. FELDMANN and A. H. PATERSON, 1994 QTL mapping of naturally-occurring variation in flowering time of Arabidopsis thaliana. Mol. Gen. Genet 245: 548-555.
28. LANDE, R., 1975 The maintenance of genetic variability by mutation in a polygenic character with linked loci. Genet. Res. 26: 221-235.
29. LANDE, R., 1982 A quantitative genetic theory of life history evolution. Ecology 63: 607-615.
30. LANDE, R., and R. THOMPSON, 1990 Efficiency of marker-assisted selection in the improvement of quantitative traits. Genetics 124: 743-756.
31. LANDER, E. S., and D. BOTSTEIN, 1989 Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121: 185-199.
32. LARK, K, G., K. CHASE, F. ADLER, L. M. MANSUR and J. H. ORF, 1995 Interactions between quantitative trait loci in soybean in which trait variation at one locus is conditional upon a specific allele at another. Proc. Natl. Acad. Sci. USA 92: 4656-4660.
33. LI, Z. K., and J. N. RUTGER, 1997 Geographic distribution and multilocus structure of isozyme variation of rice (Oryza sativa L.). Theor. Appl. Genet. (in press).
34. LI, Z. K., S. R. M. PINSON, J. W. STANSEL and W. D. PARK, 1995a Identification of QTL for heading date and plant height in rice using RFLP markers. Theor. Appl.Genet. 91: 374-381.
35. Li, Z. K., S. R. M. PINSON, M. A. MARCHETTI, J. W. STANSEL and W. D. PARK, 1995b Characterization of quantitative trait loci contributing to field resistance to sheath blight (Rhizonctonia solani) in rice. Theor. Appl. Genet. 91: 382-388.
36. LOREN, H. R., B. SINERVO, C. R. LINDER, M. C. UNGERER and D. M. ARIAS, 1996 Role of gene interactions in hybrid speciation: evidence from ancient and experimental hybrids. Science 272: 741-745.
37. MATHER, K., and J. L. JINKS, 1982 Biometrical Genetics, Ed. 3. Chapman and Hall, London.
38. OKA, H. I., 1988 Evolution of cultivated rice (Oryza sativa L.). Japan Scientific Societies Press, Tokyo and Elsevier Science Publishers, Amsterdam, Oxford, New York, and Tokyo.
39. ORR, H. A., 1995 The population genetics of speciation: the evolution of hybrid incompatibilities. Genetics 139: 1805-1813.
40. PALOPOLI, M. F., and C. I. WU, 1994 Genetics of hybrid male sterility between Drosophila sibling species: a complex web of epistasis is related in interspecific studies. Genetics 138: 329-341.
41. PATERSON, A. H., S. E. LANDER, J. D. HEWITT, S. PETERSON, H. D. LINCOLN et al,. 1988 Resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriction fragment length polymorphisms. Nature 335: 721-726.
42. PATERSON, A. H., D. S. HEWITT, J. D. ZAMIR, D. RABINOWITCH, H. D. LINCOLN et al., 1991a Mendelian factors underlying quantitative traits in tomato: comparison across species, generations and environments. Genetics 127: 181-197.
43. PATERSON, A. H., J. W. DEVERNA, B. LANINI and S. D. TANKSLEY, 1991b Fine mapping of quantitative trait loci using selected overlapping recombinant chromosomes, in a interspecies cross of tomato. Genetics 124: 735-742.
44. POONI, H. S., D. J. COOMBS and P. S. JINKS, 1987 Detection of epistasis and linkage of interacting genes in the presence of reciprocal differences. Heredity 58: 257-266.
45. SATO, S., and I. SAKAMOTO, 1983 Inheritance of heading time in isogenic line rice cultivar, Taichung 65 carrying earliness genes from a reciprocal translocation homozygote, T3-7. Jpn. J. Breed. 33 (Suppl. 1): 118-119.
46. SCHON, C. S., A. E. MELCHINGER, J. BOPPENMAIER, E. B. JUNG, R. G. HERRMANN et al., 1994 RFLP mapping in maize: quantitative trait loci affecting testcross performance of elite European flint lines. Crop Sci. 34: 378-389.
47. SPASSKY, B., T. DOBZHANSKY and W. W. ANDERSON, 1965 Genetics of natural populations. XXXVI. Epistatic interactions of the components of the genetic load in Drosophila pseudoobscura. Genetics 52: 653-664.
48. SPICKETT, S. G., and J. M. THODAY, 1966 Regular response to selection 3. Interaction between located polygenes. Genet. Res. 7: 96-121.
49. STUBER, C. W., M. D. EDWARDS and J. F. WENDEL, 1987 Molecular marker-facilitated investigations of quantitative trait loci in maize. II. Factors influencing yield and its components traits. Crop Sci. 27: 239-248.
50. STUBER, C. W., S. E. LINCOLN, D. W. WOLFF, T. HELENTJARIS and E. S. LANDER, 1992 Identification of genetic factors contributing to heterosis in a hybrid from two elite maize inbred lines using molecular markers. Genetics 132: 823-839.
51. STROMBERG, L. D., J. W. DUDLEY and G. K. RUFENER, 1994 Comparing conventional early generation selection with molecular marker assisted selection in maize. Crop Sci. 34: 1221-1225.
52. SZATHMARY, E., 1993 Do deletion mutations act synergistically? Metabolic control therapy provides a partial answer. Genetics 133: 127-132.
53. TANKSLEY, S. D., and J. D. HEWITT, 1988 Use of molecular markers in breeding for soluble solids in tomato - a re-examination. Theor. Appl. Genet. 75: 811-823.
54. TEMPLETON, A. R., 1979 The unit of selection in Drosophila mercatorum. II. Genetic evolution and the origin of coadapted genomes in parthenogenetic strains. Genetics 92: 1265-1282.
55. TEMPLETON, A. R., 1980 The theory of speciation via the founder principle. Genetics 94: 1011-1038.
56. VAN DER VEEN, J. H., 1959 Tests of non-allelic interaction and linkage for quantitative characters in generations derived from two diploid pure lines. Genetic XXX (3): 201-232.
57. WADE, M. J., 1992 Sewall Wright: gene interaction and the shifting balance theory. Oxf. Surv. Evol. Biol. 8: 33-62.
58. WRIGHT, S., 1931 Evolution in Mendelian populations. Genetics 16: 97-159.
59. WRIGHT, S. 1932 The roles of mutation, inbreeding, crossbreeding and selection in evolution. Proc. VI. Intern. Congr. Genet. 1: 356-366.
60. WRIGHT, S., 1951 The genetic structure of populations. Ann. Eugenics 15: 323-354.
61. ZENG, Z. B., 1993 Theoretical basis of separation of multiple linked gene effects on mapping quantitative trait loci. Proc. Natl. Acad. Sci. USA 90: 10972-10976.
62. ZENG, Z. B., 1994 The precision mapping of quantitative trait loci. Genetics 136: 1457-1468.