-
1
-
-
34247644614
-
Regulation of actin filament assembly by Arp2/3 complex and formins
-
Pollard TD, (2007) Regulation of actin filament assembly by Arp2/3 complex and formins. Annu Rev Biophys Biomol Struct 36: 451-477.
-
(2007)
Annu Rev Biophys Biomol Struct
, vol.36
, pp. 451-477
-
-
Pollard, T.D.1
-
2
-
-
0034896467
-
Thermodynamics and kinetics of actin filament nucleation
-
Sept D, McCammon JA, (2001) Thermodynamics and kinetics of actin filament nucleation. Biophys J 81: 667-674.
-
(2001)
Biophys J
, vol.81
, pp. 667-674
-
-
Sept, D.1
McCammon, J.A.2
-
3
-
-
18044379419
-
Actin nucleation: spire - actin nucleator in a class of its own
-
Baum B, Kunda P, (2005) Actin nucleation: spire- actin nucleator in a class of its own. Curr Biol 15: R305-308.
-
(2005)
Curr Biol
, vol.15
, pp. 305-308
-
-
Baum, B.1
Kunda, P.2
-
4
-
-
30844449003
-
Molecular details of formin-mediated actin assembly
-
Kovar DR, (2006) Molecular details of formin-mediated actin assembly. Curr Opin Cell Biol 18: 11-17.
-
(2006)
Curr Opin Cell Biol
, vol.18
, pp. 11-17
-
-
Kovar, D.R.1
-
5
-
-
0035910096
-
Direct real-time observation of actin filament branching mediated by Arp2/3 complex using total internal reflection fluorescence microscopy
-
Amann KJ, Pollard TD, (2001) Direct real-time observation of actin filament branching mediated by Arp2/3 complex using total internal reflection fluorescence microscopy. Proc Natl Acad Sci U S A 98: 15009-15013.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 15009-15013
-
-
Amann, K.J.1
Pollard, T.D.2
-
6
-
-
0032568650
-
The interaction of Arp2/3 complex with actin: nucleation, high affinity pointed end capping, and formation of branching networks of filaments
-
Mullins RD, Heuser JA, Pollard TD, (1998) The interaction of Arp2/3 complex with actin: nucleation, high affinity pointed end capping, and formation of branching networks of filaments. Proc Natl Acad Sci U S A 95: 6181-6186.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 6181-6186
-
-
Mullins, R.D.1
Heuser, J.A.2
Pollard, T.D.3
-
7
-
-
33749037156
-
The ARP2/3 complex: an actin nucleator comes of age
-
Goley ED, Welch MD, (2006) The ARP2/3 complex: an actin nucleator comes of age. Nat Rev Mol Cell Biol 7: 713-726.
-
(2006)
Nat Rev Mol Cell Biol
, vol.7
, pp. 713-726
-
-
Goley, E.D.1
Welch, M.D.2
-
8
-
-
0037459075
-
Cellular motility driven by assembly and disassembly of actin filaments
-
Pollard TD, Borisy GG, (2003) Cellular motility driven by assembly and disassembly of actin filaments. Cell 112: 453-465.
-
(2003)
Cell
, vol.112
, pp. 453-465
-
-
Pollard, T.D.1
Borisy, G.G.2
-
9
-
-
14744286895
-
Tumor cells caught in the act of invading: their strategy for enhanced cell motility
-
Wang W, Goswami S, Sahai E, Wyckoff JB, Segall JE, et al. (2005) Tumor cells caught in the act of invading: their strategy for enhanced cell motility. Trends Cell Biol 15: 138-145.
-
(2005)
Trends Cell Biol
, vol.15
, pp. 138-145
-
-
Wang, W.1
Goswami, S.2
Sahai, E.3
Wyckoff, J.B.4
Segall, J.E.5
-
10
-
-
0033576288
-
Influence of the C terminus of Wiskott-Aldrich syndrome protein (WASp) and the Arp2/3 complex on actin polymerization
-
Higgs HN, Blanchoin L, Pollard TD, (1999) Influence of the C terminus of Wiskott-Aldrich syndrome protein (WASp) and the Arp2/3 complex on actin polymerization. Biochemistry 38: 15212-15222.
-
(1999)
Biochemistry
, vol.38
, pp. 15212-15222
-
-
Higgs, H.N.1
Blanchoin, L.2
Pollard, T.D.3
-
11
-
-
6344258806
-
Critical conformational changes in the Arp2/3 complex are induced by nucleotide and nucleation promoting factor
-
Goley ED, Rodenbusch SE, Martin AC, Welch MD, (2004) Critical conformational changes in the Arp2/3 complex are induced by nucleotide and nucleation promoting factor. Mol Cell 16: 269-279.
-
(2004)
Mol Cell
, vol.16
, pp. 269-279
-
-
Goley, E.D.1
Rodenbusch, S.E.2
Martin, A.C.3
Welch, M.D.4
-
12
-
-
13844250532
-
Effects of Arp2 and Arp3 nucleotide-binding pocket mutations on Arp2/3 complex function
-
Martin AC, Xu X-P, Rouiller I, Kaksonen M, Sun Y, et al. (2005) Effects of Arp2 and Arp3 nucleotide-binding pocket mutations on Arp2/3 complex function. J Cell Biol 168: 315-328.
-
(2005)
J Cell Biol
, vol.168
, pp. 315-328
-
-
Martin, A.C.1
Xu, X.-P.2
Rouiller, I.3
Kaksonen, M.4
Sun, Y.5
-
13
-
-
0033528995
-
Activation of the yeast Arp2/3 complex by Bee1p, a WASP-family protein
-
Winter D, Lechler T, Li R, (1999) Activation of the yeast Arp2/3 complex by Bee1p, a WASP-family protein. Curr Biol 9: 501-504.
-
(1999)
Curr Biol
, vol.9
, pp. 501-504
-
-
Winter, D.1
Lechler, T.2
Li, R.3
-
14
-
-
0033587188
-
The Wiskott-Aldrich syndrome protein directs actin-based motility by stimulating actin nucleation with the Arp2/3 complex
-
Yarar D, To W, Abo A, Welch MD, (1999) The Wiskott-Aldrich syndrome protein directs actin-based motility by stimulating actin nucleation with the Arp2/3 complex. Curr Biol 9: 555-558.
-
(1999)
Curr Biol
, vol.9
, pp. 555-558
-
-
Yarar, D.1
To, W.2
Abo, A.3
Welch, M.D.4
-
15
-
-
0034683746
-
Mechanism of N-WASP activation by CDC42 and phosphatidylinositol 4, 5-bisphosphate
-
Rohatgi R, Ho HY, Kirschner MW, (2000) Mechanism of N-WASP activation by CDC42 and phosphatidylinositol 4, 5-bisphosphate. J Cell Biol 150: 1299-1310.
-
(2000)
J Cell Biol
, vol.150
, pp. 1299-1310
-
-
Rohatgi, R.1
Ho, H.Y.2
Kirschner, M.W.3
-
16
-
-
0032494137
-
SCAR, a WASP-related protein, isolated as a suppressor of receptor defects in late Dictyostelium development
-
Bear JE, Rawls JF, Saxe CL 3rd, (1998) SCAR, a WASP-related protein, isolated as a suppressor of receptor defects in late Dictyostelium development. J Cell Biol 142: 1325-1335.
-
(1998)
J Cell Biol
, vol.142
, pp. 1325-1335
-
-
Bear, J.E.1
Rawls, J.F.2
Saxe 3rd, C.L.3
-
17
-
-
0033616763
-
Scar, a WASp-related protein, activates nucleation of actin filaments by the Arp2/3 complex
-
Machesky LM, Mullins RD, Higgs HN, Kaiser DA, Blanchoin L, et al. (1999) Scar, a WASp-related protein, activates nucleation of actin filaments by the Arp2/3 complex. Proc Natl Acad Sci U S A 96: 3739-3744.
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 3739-3744
-
-
Machesky, L.M.1
Mullins, R.D.2
Higgs, H.N.3
Kaiser, D.A.4
Blanchoin, L.5
-
18
-
-
0032479578
-
Interaction of human Arp2/3 complex and the Listeria monocytogenes ActA protein in actin filament nucleation
-
Welch MD, Rosenblatt J, Skoble J, Portnoy DA, Mitchison TJ, (1998) Interaction of human Arp2/3 complex and the Listeria monocytogenes ActA protein in actin filament nucleation. Science 281: 105-108.
-
(1998)
Science
, vol.281
, pp. 105-108
-
-
Welch, M.D.1
Rosenblatt, J.2
Skoble, J.3
Portnoy, D.A.4
Mitchison, T.J.5
-
19
-
-
0842263990
-
The RickA protein of Rickettsia conorii activates the Arp2/3 complex
-
Gouin E, Egile C, Dehoux P, Villiers V, Adams J, et al. (2004) The RickA protein of Rickettsia conorii activates the Arp2/3 complex. Nature 427: 457-461.
-
(2004)
Nature
, vol.427
, pp. 457-461
-
-
Gouin, E.1
Egile, C.2
Dehoux, P.3
Villiers, V.4
Adams, J.5
-
20
-
-
4043176919
-
A Rickettsia WASP-like protein activates the Arp2/3 complex and mediates actin-based motility
-
Jeng RL, Goley ED, D'Alessio JA, Chaga OY, Svitkina TM, et al. (2004) A Rickettsia WASP-like protein activates the Arp2/3 complex and mediates actin-based motility. Cell Microbiol 6: 761-769.
-
(2004)
Cell Microbiol
, vol.6
, pp. 761-769
-
-
Jeng, R.L.1
Goley, E.D.2
D'Alessio, J.A.3
Chaga, O.Y.4
Svitkina, T.M.5
-
21
-
-
4644342865
-
Regulation of WASP/WAVE proteins: making a long story short
-
Bompard G, Caron E, (2004) Regulation of WASP/WAVE proteins: making a long story short. J Cell Biol 166: 957-962.
-
(2004)
J Cell Biol
, vol.166
, pp. 957-962
-
-
Bompard, G.1
Caron, E.2
-
22
-
-
30844466190
-
Protein complexes regulating Arp2/3-mediated actin assembly
-
Stradal TEB, Scita G, (2006) Protein complexes regulating Arp2/3-mediated actin assembly. Curr Opin Cell Biol 18: 4-10.
-
(2006)
Curr Opin Cell Biol
, vol.18
, pp. 4-10
-
-
Stradal, T.E.B.1
Scita, G.2
-
23
-
-
8144229871
-
Crystal structures of actin-related protein 2/3 complex with bound ATP or ADP
-
Nolen BJ, Littlefield RS, Pollard TD, (2004) Crystal structures of actin-related protein 2/3 complex with bound ATP or ADP. Proc Natl Acad Sci U S A 101: 15627-15632.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 15627-15632
-
-
Nolen, B.J.1
Littlefield, R.S.2
Pollard, T.D.3
-
24
-
-
34247619703
-
Insights into the influence of nucleotides on actin family proteins from seven structures of Arp2/3 complex
-
Nolen BJ, Pollard TD, (2007) Insights into the influence of nucleotides on actin family proteins from seven structures of Arp2/3 complex. Mol Cell 26: 449-457.
-
(2007)
Mol Cell
, vol.26
, pp. 449-457
-
-
Nolen, B.J.1
Pollard, T.D.2
-
25
-
-
0035941045
-
Crystal structure of Arp2/3 complex
-
Robinson RC, Turbedsky K, Kaiser DA, Marchand JB, Higgs HN, et al. (2001) Crystal structure of Arp2/3 complex. Science 294: 1679-1684.
-
(2001)
Science
, vol.294
, pp. 1679-1684
-
-
Robinson, R.C.1
Turbedsky, K.2
Kaiser, D.A.3
Marchand, J.B.4
Higgs, H.N.5
-
26
-
-
11444267246
-
Conformational changes in the Arp2/3 complex leading to actin nucleation
-
Rodal AA, Sokolova O, Robins DB, Daugherty KM, Hippenmeyer S, et al. (2005) Conformational changes in the Arp2/3 complex leading to actin nucleation. Nat Struct Mol Biol 12: 26-31.
-
(2005)
Nat Struct Mol Biol
, vol.12
, pp. 26-31
-
-
Rodal, A.A.1
Sokolova, O.2
Robins, D.B.3
Daugherty, K.M.4
Hippenmeyer, S.5
-
27
-
-
38049078282
-
The structural basis of actin filament branching by the Arp2/3 complex
-
Rouiller I, Xu X, Amann K, Egile C, Nickell S, et al. (2008) The structural basis of actin filament branching by the Arp2/3 complex. J Cell Biol 180: 887-95.
-
(2008)
J Cell Biol
, vol.180
, pp. 887-895
-
-
Rouiller, I.1
Xu, X.2
Amann, K.3
Egile, C.4
Nickell, S.5
-
28
-
-
50249129628
-
Phosphorylation of the Arp2/3 complex is necessary to nucleate actin filaments
-
LeClaire LL, Baumgartner M, Iwasa JH, Mullins RD, Barber DL, (2008) Phosphorylation of the Arp2/3 complex is necessary to nucleate actin filaments. J Cell Biol 182: 647-654.
-
(2008)
J Cell Biol
, vol.182
, pp. 647-654
-
-
LeClaire, L.L.1
Baumgartner, M.2
Iwasa, J.H.3
Mullins, R.D.4
Barber, D.L.5
-
29
-
-
38049081531
-
Nucleotide-Mediated Conformational Changes of Monomeric Actin and Arp3 Studied by Molecular Dynamics Simulations
-
Dalhaimer P, Pollard TD, Nolen BJ, (2008) Nucleotide-Mediated Conformational Changes of Monomeric Actin and Arp3 Studied by Molecular Dynamics Simulations. J Mol Biol 376: 166-83.
-
(2008)
J Mol Biol
, vol.376
, pp. 166-183
-
-
Dalhaimer, P.1
Pollard, T.D.2
Nolen, B.J.3
-
30
-
-
58149332174
-
Molecular dynamics simulation and coarse-grained analysis of the Arp2/3 complex
-
Pfaendtner J, Voth GA, (2008) Molecular dynamics simulation and coarse-grained analysis of the Arp2/3 complex. Biophys J 95: 5324-5333.
-
(2008)
Biophys J
, vol.95
, pp. 5324-5333
-
-
Pfaendtner, J.1
Voth, G.A.2
-
31
-
-
0742289599
-
Identification of functionally important residues of Arp2/3 complex by analysis of homology models from diverse species
-
Beltzner CC, Pollard TD, (2004) Identification of functionally important residues of Arp2/3 complex by analysis of homology models from diverse species. J Mol Biol 336: 551-565.
-
(2004)
J Mol Biol
, vol.336
, pp. 551-565
-
-
Beltzner, C.C.1
Pollard, T.D.2
-
32
-
-
78049352798
-
Molecular dynamics simulations of arp2/3 complex activation
-
Dalhaimer P, Pollard TD, (2010) Molecular dynamics simulations of arp2/3 complex activation. Biophys J 99: 2568-2576.
-
(2010)
Biophys J
, vol.99
, pp. 2568-2576
-
-
Dalhaimer, P.1
Pollard, T.D.2
-
33
-
-
77952417606
-
An actin-filament-binding interface on the Arp2/3 complex is critical for nucleation and branch stability
-
Goley ED, Rammohan A, Znameroski EA, Firat-Karalar EN, Sept D, et al. (2010) An actin-filament-binding interface on the Arp2/3 complex is critical for nucleation and branch stability. Proc Natl Acad Sci U S A 107: 8159-8164.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 8159-8164
-
-
Goley, E.D.1
Rammohan, A.2
Znameroski, E.A.3
Firat-Karalar, E.N.4
Sept, D.5
-
34
-
-
64549122329
-
Computational studies of protein regulation by post-translational phosphorylation
-
Narayanan A, Jacobson MP, (2009) Computational studies of protein regulation by post-translational phosphorylation. Curr Opin Struct Biol 19: 156-163.
-
(2009)
Curr Opin Struct Biol
, vol.19
, pp. 156-163
-
-
Narayanan, A.1
Jacobson, M.P.2
-
35
-
-
34248532092
-
Anatomy of a structural pathway for activation of the catalytic domain of Src kinase Hck
-
Banavali NK, Roux B, (2007) Anatomy of a structural pathway for activation of the catalytic domain of Src kinase Hck. Proteins 67: 1096-1112.
-
(2007)
Proteins
, vol.67
, pp. 1096-1112
-
-
Banavali, N.K.1
Roux, B.2
-
36
-
-
33645523760
-
How does activation loop phosphorylation modulate catalytic activity in the cAMP-dependent protein kinase: a theoretical study
-
Cheng Y, Zhang Y, McCammon JA, (2006) How does activation loop phosphorylation modulate catalytic activity in the cAMP-dependent protein kinase: a theoretical study. Protein Sci 15: 672-683.
-
(2006)
Protein Sci
, vol.15
, pp. 672-683
-
-
Cheng, Y.1
Zhang, Y.2
McCammon, J.A.3
-
37
-
-
33646266474
-
Conformational changes in protein loops and helices induced by post-translational phosphorylation
-
Groban ES, Narayanan A, Jacobson MP, (2006) Conformational changes in protein loops and helices induced by post-translational phosphorylation. PLoS Comput Biol 2: e32.
-
(2006)
PLoS Comput Biol
, vol.2
-
-
Groban, E.S.1
Narayanan, A.2
Jacobson, M.P.3
-
38
-
-
34648831244
-
The activation and inhibition of cyclin-dependent kinase-5 by phosphorylation
-
Zhang B, Tan VB, Lim KM, Tay TE, (2007) The activation and inhibition of cyclin-dependent kinase-5 by phosphorylation. Biochemistry 46: 10841-10851.
-
(2007)
Biochemistry
, vol.46
, pp. 10841-10851
-
-
Zhang, B.1
Tan, V.B.2
Lim, K.M.3
Tay, T.E.4
-
39
-
-
13644250683
-
Phosphorylation effects on cis/trans isomerization and the backbone conformation of serine-proline motifs: accelerated molecular dynamics analysis
-
Hamelberg D, Shen T, McCammon JA, (2005) Phosphorylation effects on cis/trans isomerization and the backbone conformation of serine-proline motifs: accelerated molecular dynamics analysis. J Am Chem Soc 127: 1969-1974.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 1969-1974
-
-
Hamelberg, D.1
Shen, T.2
McCammon, J.A.3
-
40
-
-
35448961596
-
A proposed signaling motif for nuclear import in mRNA processing via the formation of arginine claw
-
Hamelberg D, Shen T, McCammon JA, (2007) A proposed signaling motif for nuclear import in mRNA processing via the formation of arginine claw. Proc Natl Acad Sci U S A 104: 14947-14951.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 14947-14951
-
-
Hamelberg, D.1
Shen, T.2
McCammon, J.A.3
-
41
-
-
33749323314
-
Structural changes in the cytoplasmic domain of phospholamban by phosphorylation at Ser16: a molecular dynamics study
-
Sugita Y, Miyashita N, Yoda T, Ikeguchi M, Toyoshima C, (2006) Structural changes in the cytoplasmic domain of phospholamban by phosphorylation at Ser16: a molecular dynamics study. Biochemistry 45: 11752-11761.
-
(2006)
Biochemistry
, vol.45
, pp. 11752-11761
-
-
Sugita, Y.1
Miyashita, N.2
Yoda, T.3
Ikeguchi, M.4
Toyoshima, C.5
-
42
-
-
0035930328
-
Reconstitution of human Arp2/3 complex reveals critical roles of individual subunits in complex structure and activity
-
Gournier H, Goley ED, Niederstrasser H, Trinh T, Welch MD, (2001) Reconstitution of human Arp2/3 complex reveals critical roles of individual subunits in complex structure and activity. Mol Cell 8: 1041-1052.
-
(2001)
Mol Cell
, vol.8
, pp. 1041-1052
-
-
Gournier, H.1
Goley, E.D.2
Niederstrasser, H.3
Trinh, T.4
Welch, M.D.5
-
43
-
-
0024988340
-
Atomic-Structure of the Actin - Dnase-I Complex
-
Kabsch W, Mannherz HG, Suck D, Pai EF, Holmes KC, (1990) Atomic-Structure of the Actin- Dnase-I Complex. Nature 347: 37-44.
-
(1990)
Nature
, vol.347
, pp. 37-44
-
-
Kabsch, W.1
Mannherz, H.G.2
Suck, D.3
Pai, E.F.4
Holmes, K.C.5
-
44
-
-
33846630988
-
Strengths of hydrogen bonds involving phosphorylated amino acid side chains
-
Mandell DJ, Chorny I, Groban ES, Wong SE, Levine E, et al. (2007) Strengths of hydrogen bonds involving phosphorylated amino acid side chains. J Am Chem Soc 129: 820-827.
-
(2007)
J Am Chem Soc
, vol.129
, pp. 820-827
-
-
Mandell, D.J.1
Chorny, I.2
Groban, E.S.3
Wong, S.E.4
Levine, E.5
-
45
-
-
0035413607
-
Structural basis for control by phosphorylation
-
Johnson LN, Lewis RJ, (2001) Structural basis for control by phosphorylation. Chem Rev 101: 2209-2242.
-
(2001)
Chem Rev
, vol.101
, pp. 2209-2242
-
-
Johnson, L.N.1
Lewis, R.J.2
-
46
-
-
0031051993
-
Structure, subunit topology, and actin-binding activity of the Arp2/3 complex from Acanthamoeba
-
Mullins RD, Stafford WF, Pollard TD, (1997) Structure, subunit topology, and actin-binding activity of the Arp2/3 complex from Acanthamoeba. J Cell Biol 136: 331-343.
-
(1997)
J Cell Biol
, vol.136
, pp. 331-343
-
-
Mullins, R.D.1
Stafford, W.F.2
Pollard, T.D.3
-
47
-
-
0036310711
-
On the role of the crystal environment in determining protein side-chain conformations
-
Jacobson MP, Friesner RA, Xiang Z, Honig B, (2002) On the role of the crystal environment in determining protein side-chain conformations. J Mol Biol 320: 597-608.
-
(2002)
J Mol Biol
, vol.320
, pp. 597-608
-
-
Jacobson, M.P.1
Friesner, R.A.2
Xiang, Z.3
Honig, B.4
-
48
-
-
1842532008
-
A hierarchical approach to all-atom protein loop prediction
-
Jacobson MP, Pincus DL, Rapp CS, Day TJ, Honig B, et al. (2004) A hierarchical approach to all-atom protein loop prediction. Proteins 55: 351-367.
-
(2004)
Proteins
, vol.55
, pp. 351-367
-
-
Jacobson, M.P.1
Pincus, D.L.2
Rapp, C.S.3
Day, T.J.4
Honig, B.5
-
49
-
-
0037038549
-
Force field validation using protein side chain prediction
-
Jacobson MP, Kaminski GA, Friesner RA, Rapp CS, (2002) Force field validation using protein side chain prediction. J Phys Chem B 106: 11673-11680.
-
(2002)
J Phys Chem B
, vol.106
, pp. 11673-11680
-
-
Jacobson, M.P.1
Kaminski, G.A.2
Friesner, R.A.3
Rapp, C.S.4
-
50
-
-
0004016501
-
Comparison of Simple Potential Functions for Simulating Liquid Water
-
Jorgensen WL, Chandrasekhar J, Madura JD, Impey RW, Klein ML, (1983) Comparison of Simple Potential Functions for Simulating Liquid Water. J Chem Phys 79: 926-935.
-
(1983)
J Chem Phys
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
51
-
-
34548283148
-
Scalable algorithms for molecular dynamics simulations on commodity clusters
-
11-17 November 2006; Tampa, Florida, United States
-
Bowers KJ, Chow E, Xu H, Dror RO, Eastwood MP, et al. (2006) Scalable algorithms for molecular dynamics simulations on commodity clusters. In: SC '06Proceedings of the 2006 ACM/IEEConference on Supercomputing. 11-17 November 2006; Tampa, Florida, United States.
-
(2006)
SC '06Proceedings of the 2006 ACM/IEEConference on Supercomputing
-
-
Bowers, K.J.1
Chow, E.2
Xu, H.3
Dror, R.O.4
Eastwood, M.P.5
-
52
-
-
36449003554
-
Constant-Pressure Molecular-Dynamics Algorithms
-
Martyna GJ, Tobias DJ, Klein ML, (1994) Constant-Pressure Molecular-Dynamics Algorithms. J Chem Phys 101: 4177-4189.
-
(1994)
J Chem Phys
, vol.101
, pp. 4177-4189
-
-
Martyna, G.J.1
Tobias, D.J.2
Klein, M.L.3
-
53
-
-
0000577041
-
Large-Amplitude Nonlinear Motions in Proteins
-
Garcia AE, (1992) Large-Amplitude Nonlinear Motions in Proteins. Phys Rev Lett 68: 2696-2699.
-
(1992)
Phys Rev Lett
, vol.68
, pp. 2696-2699
-
-
Garcia, A.E.1
-
54
-
-
0028877423
-
Harmonicity and Anharmonicity in Protein Dynamics - a Normal-Mode Analysis and Principal Component Analysis
-
Hayward S, Kitao A, Go N, (1995) Harmonicity and Anharmonicity in Protein Dynamics- a Normal-Mode Analysis and Principal Component Analysis. Proteins 23: 177-186.
-
(1995)
Proteins
, vol.23
, pp. 177-186
-
-
Hayward, S.1
Kitao, A.2
Go, N.3
-
55
-
-
33750398103
-
Bio3d: an R package for the comparative analysis of protein structures
-
Grant BJ, Rodrigues APC, ElSawy KM, McCammon JA, Caves LSD, (2006) Bio3d: an R package for the comparative analysis of protein structures. Bioinformatics 22: 2695-2696.
-
(2006)
Bioinformatics
, vol.22
, pp. 2695-2696
-
-
Grant, B.J.1
Rodrigues, A.P.C.2
ElSawy, K.M.3
McCammon, J.A.4
Caves, L.S.D.5
-
56
-
-
4444221565
-
UCSF Chimera-a visualization system for exploratory research and analysis
-
Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, et al. (2004) UCSF Chimera-a visualization system for exploratory research and analysis. J Comput Chem 25: 1605-1612.
-
(2004)
J Comput Chem
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
|