-
1
-
-
0000547262
-
Periodic selection in Escherichia coli
-
Atwood, K. C., L. K. Schneider, and F. J. Ryan, 1951 Periodic selection in Escherichia coli. Proc. Natl. Acad. Sci. USA 37(3): 146.
-
(1951)
Proc. Natl. Acad. Sci. USA
, vol.37
, Issue.3
, pp. 146
-
-
Atwood, K.C.1
Schneider, L.K.2
Ryan, F.J.3
-
2
-
-
70350641005
-
Genome evolution and adaptation in a long-term experiment with E
-
Barrick, J. E., D. S. Yu, S. H. Yoon, H. Jeong, T. K. Oh et al., 2009 Genome evolution and adaptation in a long-term experiment with E. coli. Nature 461(7268): 1243-1247
-
(2009)
Coli. Nature
, vol.461
, Issue.7268
, pp. 1243-1247
-
-
Barrick, J.E.1
Yu, D.S.2
Yoon, S.H.3
Jeong, H.4
Oh, T.K.5
-
3
-
-
34548693859
-
Recombination speeds adaptation by reducing competition between beneficial mutations in populations of Escherichia coli
-
Cooper, T. F., 2007 Recombination speeds adaptation by reducing competition between beneficial mutations in populations of Escherichia coli. PLoS Biol. 5(9): e225.
-
(2007)
PLoS Biol
, vol.5
, Issue.9
-
-
Cooper, T.F.1
-
5
-
-
33847314378
-
Beneficial mutation selection balance and the effect of linkage on positive selection
-
Desai, M. M., and D. S. Fisher, 2007 Beneficial mutation selection balance and the effect of linkage on positive selection. Genetics 176: 1759-1798
-
(2007)
Genetics
, vol.176
, pp. 1759-1798
-
-
Desai, M.M.1
Fisher, D.S.2
-
6
-
-
33847256353
-
The speed of evolution and maintenance of variation in asexual populations
-
Desai, M. M., D. S. Fisher, and A. W. Murray, 2007 The speed of evolution and maintenance of variation in asexual populations. Curr. Biol. 17(5): 385-394
-
(2007)
Curr. Biol
, vol.17
, Issue.5
, pp. 385-394
-
-
Desai, M.M.1
Fisher, D.S.2
Murray, A.W.3
-
7
-
-
0033555421
-
Diminishing returns from mutation supply rate in asexual populations
-
de Visser, J. A. G. M., C. W. Zeyl, J. L. Blanchard, P. J. Gerrish, and R. Lenski, 1999 Diminishing returns from mutation supply rate in asexual populations. Science 283(5400): 404-406
-
(1999)
Science
, vol.283
, Issue.5400
, pp. 404-406
-
-
de Visser, J.A.G.M.1
Zeyl, C.W.2
Blanchard, J.L.3
Gerrish, P.J.4
Lenski, R.5
-
8
-
-
0037671479
-
Interacting particles, the stochastic FKPP equation, and duality
-
Doering, C., C. Mueller, and P. Smereka, 2003 Interacting particles, the stochastic FKPP equation, and duality. Physica A 325(1-2): 243-259
-
(2003)
Physica A
, vol.325
, Issue.1-2
, pp. 243-259
-
-
Doering, C.1
Mueller, C.2
Smereka, P.3
-
9
-
-
0031916242
-
Rates of spontaneous mutation
-
Drake, J. W., B. Charlesworth, D. Charlesworth, and J. F. Crow, 1998 Rates of spontaneous mutation. Genetics 148: 1667-1686
-
(1998)
Genetics
, vol.148
, pp. 1667-1686
-
-
Drake, J.W.1
Charlesworth, B.2
Charlesworth, D.3
Crow, J.F.4
-
10
-
-
0035296743
-
Biological evolution and statistical physics
-
Drossel, B., 2001 Biological evolution and statistical physics. Adv. Phys. 50(2): 209-295
-
(2001)
Adv. Phys
, vol.50
, Issue.2
, pp. 209-295
-
-
Drossel, B.1
-
11
-
-
78650819654
-
Spatial dynamics of the 1918 influenza pandemic in England, Wales and the United States
-
Eggo, R. M., S. Cauchemez, and N. M. Ferguson, 2011 Spatial dynamics of the 1918 influenza pandemic in England, Wales and the United States. J. R. Soc. Interface/R. Soc. 8(55): 233-243.
-
(2011)
J. R. Soc. Interface/R. Soc
, vol.8
, Issue.55
, pp. 233-243
-
-
Eggo, R.M.1
Cauchemez, S.2
Ferguson, N.M.3
-
12
-
-
0030017289
-
Punctuated evolution caused by selection of rare beneficial mutations
-
Elena, S. F., V. S. Cooper, and R. E. Lenski, 1996 Punctuated evolution caused by selection of rare beneficial mutations. Science 272(5269): 1802-1804
-
(1996)
Science
, vol.272
, Issue.5269
, pp. 1802-1804
-
-
Elena, S.F.1
Cooper, V.S.2
Lenski, R.E.3
-
13
-
-
34447546660
-
The distribution of fitness effects of new mutations
-
Eyre-Walker, A., and P. D. Keightley, 2007 The distribution of fitness effects of new mutations. Nat. Rev. Genet. 8(8): 610-618.
-
(2007)
Nat. Rev. Genet
, vol.8
, Issue.8
, pp. 610-618
-
-
Eyre-Walker, A.1
Keightley, P.D.2
-
15
-
-
0000268135
-
The wave of advance of advantageous genes
-
Fisher, R. A., 1937 The wave of advance of advantageous genes. Ann. Eugen. 7: 355-369
-
(1937)
Ann. Eugen
, vol.7
, pp. 355-369
-
-
Fisher, R.A.1
-
16
-
-
2542583245
-
The fate of competing beneficial mutations in an asexual population
-
Gerrish, P. J., and R. E. Lenski, 1998 The fate of competing beneficial mutations in an asexual population. Genetica 102: 127-144.
-
(1998)
Genetica
, vol.102
, pp. 127-144
-
-
Gerrish, P.J.1
Lenski, R.E.2
-
17
-
-
35148821835
-
Speed of adaptation in structured populations
-
Gonçalves, E. D. A., V. M. de Oliveira, A. Rosas, and P. R. Campos, 2007 Speed of adaptation in structured populations. Eur. Phys. J. B 59(1): 127-132
-
(2007)
Eur. Phys. J. B
, vol.59
, Issue.1
, pp. 127-132
-
-
Gonçalves, E.D.A.1
de Oliveira, V.M.2
Rosas, A.3
Campos, P.R.4
-
18
-
-
33746140082
-
Adaptive evolution in a spatially structured asexual population
-
Gordo, I., and P. R. Campos, 2006 Adaptive evolution in a spatially structured asexual population. Genetica 127(1-3): 217-229.
-
(2006)
Genetica
, vol.127
, Issue.1-3
, pp. 217-229
-
-
Gordo, I.1
Campos, P.R.2
-
19
-
-
31444433936
-
Mitochondrial DNA mutations are established in human colonic stem cells, and mutated clones expand by crypt fission
-
Greaves, L. C., S. L. Preston, P. J. Tadrous, R. W. Taylor, M. J. Barron et al., 2006 Mitochondrial DNA mutations are established in human colonic stem cells, and mutated clones expand by crypt fission. Proc. Natl. Acad. Sci. USA 103(3): 714-719
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, Issue.3
, pp. 714-719
-
-
Greaves, L.C.1
Preston, S.L.2
Tadrous, P.J.3
Taylor, R.W.4
Barron, M.J.5
-
20
-
-
33747620509
-
The effect of population structure on the adaptive radiation of microbial populations evolving in spatially structured environments
-
Habets, M. G. J. L., D. E. Rozen, R. F. Hoekstra, and J. A. G. M. de Visser, 2006 The effect of population structure on the adaptive radiation of microbial populations evolving in spatially structured environments. Ecol. Lett. 9(9): 1041-1048
-
(2006)
Ecol. Lett
, vol.9
, Issue.9
, pp. 1041-1048
-
-
Habets, M.G.J.L.1
Rozen, D.E.2
Hoekstra, R.F.3
de Visser, J.A.G.M.4
-
21
-
-
34548035443
-
Spatial structure inhibits the rate of invasion of beneficial mutations in asexual populations
-
Habets, M. G. J. L., T. Czárán, R. F. Hoekstra, and J. A. G. M. de Visser, 2007 Spatial structure inhibits the rate of invasion of beneficial mutations in asexual populations. Proc. Biol. Sci. 274 (1622): 2139-2143
-
(2007)
Proc. Biol. Sci
, vol.274
, Issue.1622
, pp. 2139-2143
-
-
Habets, M.G.J.L.1
Czárán, T.2
Hoekstra, R.F.3
de Visser, J.A.G.M.4
-
22
-
-
0000968797
-
A mathematical theory of natural and artificial selection
-
Haldane, J. B. S., 1927 A mathematical theory of natural and artificial selection. Proc. Camb. Philos. Soc. 23: 838-844
-
(1927)
Proc. Camb. Philos. Soc
, vol.23
, pp. 838-844
-
-
Haldane, J.B.S.1
-
23
-
-
79952179424
-
The noisy edge of traveling waves
-
Hallatschek, O., 2011 The noisy edge of traveling waves. Proc. Natl. Acad. Sci. USA 108(5): 1783.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, Issue.5
, pp. 1783
-
-
Hallatschek, O.1
-
24
-
-
69749120242
-
Fisher waves in the strong noise limit
-
Hallatschek, O., and K. Korolev, 2009 Fisher waves in the strong noise limit. Phys. Rev. Lett. 103(10): 1-4
-
(2009)
Phys. Rev. Lett
, vol.103
, Issue.10
, pp. 1-4
-
-
Hallatschek, O.1
Korolev, K.2
-
25
-
-
73949088975
-
Life at the front of an expanding population
-
Hallatschek, O., and D. R. Nelson, 2010 Life at the front of an expanding population. Evolution 64(1): 193-206
-
(2010)
Evolution
, vol.64
, Issue.1
, pp. 193-206
-
-
Hallatschek, O.1
Nelson, D.R.2
-
28
-
-
4243979739
-
Dynamic scaling of growing interfaces
-
Kardar, M., G. Parisi, and Y. Zhang, 1986 Dynamic scaling of growing interfaces. Phys. Rev. Lett. 56(9): 889-892
-
(1986)
Phys. Rev. Lett
, vol.56
, Issue.9
, pp. 889-892
-
-
Kardar, M.1
Parisi, G.2
Zhang, Y.3
-
29
-
-
77954463662
-
The complex network of global cargo ship movements
-
Kaluza, P., A Kölzsch, M. T. Gerstner, and B. Blasius, 2010 The complex network of global cargo ship movements. J. R. Soc. Interface 7(48): 1093-1103
-
(2010)
J. R. Soc. Interface
, vol.7
, Issue.48
, pp. 1093-1103
-
-
Kaluza, P.1
Kölzsch, A.2
Gerstner, M.T.3
Blasius, B.4
-
30
-
-
0000800333
-
On the probability of fixation of mutant genes in a population
-
Kimura, M., 1962 On the probability of fixation of mutant genes in a population. Genetics 47: 713-719
-
(1962)
Genetics
, vol.47
, pp. 713-719
-
-
Kimura, M.1
-
31
-
-
0002722044
-
A study of the equation of diffusion with increase in the quantity of matter, and its application to a biological problem
-
Kolmogorov, A. N., I. G. Petrovskii, and N. S. Piskunov, 1937 A study of the equation of diffusion with increase in the quantity of matter, and its application to a biological problem. Bull. Moscow Univ. Math. Ser. A 1(1): 713-719
-
(1937)
Bull. Moscow Univ. Math. Ser. A
, vol.1
, Issue.1
, pp. 713-719
-
-
Kolmogorov, A.N.1
Petrovskii, I.G.2
Piskunov, N.S.3
-
33
-
-
0016054647
-
A simple proof that certain quantities are independent of the geographical structure of population
-
Maruyama, T., 1974 A simple proof that certain quantities are independent of the geographical structure of population. Theor. Popul. Biol. 5(2): 148-154
-
(1974)
Theor. Popul. Biol
, vol.5
, Issue.2
, pp. 148-154
-
-
Maruyama, T.1
-
34
-
-
33845243362
-
Cancer as an evolutionary and ecological process
-
Merlo, L. M. F., J. W. Pepper, B. J. Reid, and C. C. Maley, 2006 Cancer as an evolutionary and ecological process. Nat. Rev. Cancer 6(12): 924-935
-
(2006)
Nat. Rev. Cancer
, vol.6
, Issue.12
, pp. 924-935
-
-
Merlo, L.M.F.1
Pepper, J.W.2
Reid, B.J.3
Maley, C.C.4
-
35
-
-
0033543602
-
Clonal interference and the evolution of RNA viruses
-
Miralles, R., P. J. Gerrish, A. Moya, and S. F. Elena, 1999 Clonal interference and the evolution of RNA viruses. Science 285 (5434): 1745.
-
(1999)
Science
, vol.285
, Issue.5434
, pp. 1745
-
-
Miralles, R.1
Gerrish, P.J.2
Moya, A.3
Elena, S.F.4
-
36
-
-
0001224667
-
Some genetic aspects of sex
-
Muller, H., 1932 Some genetic aspects of sex. Am. Nat. 66(703): 118-138
-
(1932)
Am. Nat
, vol.66
, Issue.703
, pp. 118-138
-
-
Muller, H.1
-
37
-
-
77950831062
-
Emergence of spatial structure in cell groups and the evolution of cooperation
-
Nadell, C. D., K. R. Foster, and J. B. Xavier, 2010 Emergence of spatial structure in cell groups and the evolution of cooperation. PLoS Comput. Biol. 6(3): e1000716.
-
(2010)
PLoS Comput. Biol
, vol.6
, Issue.3
-
-
Nadell, C.D.1
Foster, K.R.2
Xavier, J.B.3
-
38
-
-
77749268358
-
Rate of adaptation in large sexual populations
-
Neher, R. A., B. I. Shraiman, and D. S. Fisher, 2010 Rate of adaptation in large sexual populations. Genetics 184: 467-481
-
(2010)
Genetics
, vol.184
, pp. 467-481
-
-
Neher, R.A.1
Shraiman, B.I.2
Fisher, D.S.3
-
39
-
-
0001519096
-
Experiments with the chemostat on spontaneous mutations of bacteria
-
Novick, A., and L. Szilard, 1950 Experiments with the chemostat on spontaneous mutations of bacteria. Proc. Natl. Acad. Sci. USA 36(12): 708.
-
(1950)
Proc. Natl. Acad. Sci. USA
, vol.36
, Issue.12
, pp. 708
-
-
Novick, A.1
Szilard, L.2
-
40
-
-
36749000572
-
Clonal interference in large populations
-
Park, S. C., and J. Krug, 2007 Clonal interference in large populations. Proc. Natl. Acad. Sci. USA 104(46): 18135.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, Issue.46
, pp. 18135
-
-
Park, S.C.1
Krug, J.2
-
41
-
-
52749098548
-
The fixation probability of beneficial mutations
-
Patwa, Z., and L. M. Wahl, 2008 The fixation probability of beneficial mutations. J. R. Soc. Interface/R. Soc. 5(28): 1279-1289.
-
(2008)
J. R. Soc. Interface/R. Soc
, vol.5
, Issue.28
, pp. 1279-1289
-
-
Patwa, Z.1
Wahl, L.M.2
-
42
-
-
34547924819
-
Adaptive mutations in bacteria: High rate and small effects
-
Perfeito, L., L. Fernandes, C. Mota, and I. Gordo, 2007 Adaptive mutations in bacteria: high rate and small effects. Science 317 (5839): 813-815
-
(2007)
Science
, vol.317
, Issue.5839
, pp. 813-815
-
-
Perfeito, L.1
Fernandes, L.2
Mota, C.3
Gordo, I.4
-
43
-
-
40949151137
-
The effect of spatial structure on adaptation in E
-
Perfeito, L., M. I. Pereira, P. R. A. Campos, and I. Gordo, 2008 The effect of spatial structure on adaptation in E. coli. Biol. Lett. 4 (1): 57-59
-
(2008)
Coli. Biol. Lett
, vol.4
, Issue.1
, pp. 57-59
-
-
Perfeito, L.1
Pereira, M.I.2
Campos, P.R.A.3
Gordo, I.4
-
44
-
-
0000439075
-
Universal distributions for growth processes in 1+1 dimensions and random matrices
-
Prähofer, M., and H. Spohn, 2000 Universal distributions for growth processes in 1+1 dimensions and random matrices. Phys. Rev. Lett. 84(21): 4882-4885
-
(2000)
Phys. Rev. Lett
, vol.84
, Issue.21
, pp. 4882-4885
-
-
Prähofer, M.1
Spohn, H.2
-
45
-
-
78951480118
-
Parallel adaptation: One or many waves of advance of an advantageous allele?
-
Ralph, P. L., and G. Coop, 2010 Parallel adaptation: One or many waves of advance of an advantageous allele? Genetics 52: 647-668
-
(2010)
Genetics
, vol.52
, pp. 647-668
-
-
Ralph, P.L.1
Coop, G.2
-
46
-
-
0037457964
-
The solitary wave of asexual evolution
-
Rouzine, I. M., J. Wakeley, and J. M. Coffin, 2003 The solitary wave of asexual evolution. Proc. Natl. Acad. Sci. USA 100(2): 587-592
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, Issue.2
, pp. 587-592
-
-
Rouzine, I.M.1
Wakeley, J.2
Coffin, J.M.3
-
47
-
-
0037172667
-
Fitness effects of fixed beneficial mutations in microbial populations
-
Rozen, D. E., J. A. G. M. de Visser, and P. J. Gerrish, 2002 Fitness effects of fixed beneficial mutations in microbial populations. Curr. Biol. 12(12): 1040-1045
-
(2002)
Curr. Biol
, vol.12
, Issue.12
, pp. 1040-1045
-
-
Rozen, D.E.1
de Visser, J.A.G.M.2
Gerrish, P.J.3
-
48
-
-
73949146486
-
Clonal expansions in ulcerative colitis identify patients with neoplasia
-
Salk, J. J., S. J. Salipante, R. A. Risques, D. Crispin, L. Li et al., 2009 Clonal expansions in ulcerative colitis identify patients with neoplasia. Proc. Natl. Acad. Sci. USA 106(49): 20871-20876
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, Issue.49
, pp. 20871-20876
-
-
Salk, J.J.1
Salipante, S.J.2
Risques, R.A.3
Crispin, D.4
Li, L.5
-
49
-
-
0036811766
-
Fitness evolution and the rise of mutator alleles in experimental
-
Shaver, A. C., P. G. Dombrowski, J. Y. Sweeney, T. Treis, R.M. Zappala et al., 2002 Fitness evolution and the rise of mutator alleles in experimental E. coli populations. Genetics 162: 557-566
-
(2002)
E. Coli Populations. Genetics
, vol.162
, pp. 557-566
-
-
Shaver, A.C.1
Dombrowski, P.G.2
Sweeney, J.Y.3
Treis, T.4
Zappala, R.M.5
-
50
-
-
77951593683
-
Beneficial mutations and the dynamics of adaptation in asexual populations
-
Sniegowski, P. D., and P. J. Gerrish, 2010 Beneficial mutations and the dynamics of adaptation in asexual populations. Philos. Trans. R. Soc. B 365(1544): 1255-1263
-
(2010)
Philos. Trans. R. Soc. B
, vol.365
, Issue.1544
, pp. 1255-1263
-
-
Sniegowski, P.D.1
Gerrish, P.J.2
-
51
-
-
0033793385
-
Spatial organization of microbial biofilm communities
-
Tolker-Nielsen, T., and S. Molin, 2000 Spatial organization of microbial biofilm communities. Microb. Ecol. 40(2): 75-84
-
(2000)
Microb. Ecol
, vol.40
, Issue.2
, pp. 75-84
-
-
Tolker-Nielsen, T.1
Molin, S.2
-
52
-
-
0034015354
-
Biofilm, city of microbes
-
Watnick, P., and R. Kolter, 2000 Biofilm, city of microbes. J. Bacteriol. 182(10): 2675.
-
(2000)
J. Bacteriol
, vol.182
, Issue.10
, pp. 2675
-
-
Watnick, P.1
Kolter, R.2
-
53
-
-
0034765995
-
Direct estimate of the mutation rate and the distribution of fitness effects in the yeast Saccharomyces cerevisiae
-
Wloch, D. M., K. Szafraniec, R. H. Borts, and R. Korona, 2001 Direct estimate of the mutation rate and the distribution of fitness effects in the yeast Saccharomyces cerevisiae. Genetics 159: 441-452.
-
(2001)
Genetics
, vol.159
, pp. 441-452
-
-
Wloch, D.M.1
Szafraniec, K.2
Borts, R.H.3
Korona, R.4
|