메뉴 건너뛰기




Volumn 30, Issue 21, 2011, Pages 4345-4355

The complex transcription regulatory landscape of our genome: Control in three dimensions

Author keywords

enhancers; genome organization; genome topology; transcription

Indexed keywords

BETA GLOBIN; DNA BINDING PROTEIN; PROTEIN P300; SONIC HEDGEHOG PROTEIN; TRANSCRIPTION FACTOR CTCF;

EID: 80455143728     PISSN: 02614189     EISSN: 14602075     Source Type: Journal    
DOI: 10.1038/emboj.2011.344     Document Type: Article
Times cited : (59)

References (91)
  • 2
    • 58149463874 scopus 로고    scopus 로고
    • Chromosomal dynamics at the Shh locus: Limb bud-specific differential regulation of competence and active transcription
    • Amano T, Sagai T, Tanabe H, Mizushina Y, Nakazawa H, Shiroishi T (2009) Chromosomal dynamics at the Shh locus: limb bud-specific differential regulation of competence and active transcription. Dev Cell 16: 47-57
    • (2009) Dev Cell , vol.16 , pp. 47-57
    • Amano, T.1    Sagai, T.2    Tanabe, H.3    Mizushina, Y.4    Nakazawa, H.5    Shiroishi, T.6
  • 3
    • 0019811465 scopus 로고
    • Expression of a beta-globin gene is enhanced by remote SV40 DNA sequences
    • Banerji J, Rusconi S, Schaffner W (1981) Expression of a beta-globin gene is enhanced by remote SV40 DNA sequences. Cell 27 (2 Part 1): 299-308 (Pubitemid 12200499)
    • (1981) Cell , vol.27 , Issue.I2 , pp. 299-308
    • Banerji, J.1    Rusconi, S.2    Schaffner, W.3
  • 5
    • 34249026300 scopus 로고    scopus 로고
    • High-resolution profiling of histone methylations in the human genome
    • DOI 10.1016/j.cell.2007.05.009, PII S0092867407006009
    • Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K (2007) High-resolution profiling of histone methylations in the human genome. Cell 129: 823-837 (Pubitemid 46802390)
    • (2007) Cell , vol.129 , Issue.4 , pp. 823-837
    • Barski, A.1    Cuddapah, S.2    Cui, K.3    Roh, T.-Y.4    Schones, D.E.5    Wang, Z.6    Wei, G.7    Chepelev, I.8    Zhao, K.9
  • 6
    • 0034713375 scopus 로고    scopus 로고
    • Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene
    • DOI 10.1038/35013100
    • Bell AC, Felsenfeld G (2000) Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene. Nature 405: 482-485 (Pubitemid 30367427)
    • (2000) Nature , vol.405 , Issue.6785 , pp. 482-485
    • Bell, A.C.1    Felsenfeld, G.2
  • 7
    • 0033529654 scopus 로고    scopus 로고
    • The protein CTCF is required for the enhancer blocking activity of vertebrate insulators
    • DOI 10.1016/S0092-8674(00)81967-4
    • Bell AC, West AG, Felsenfeld G (1999) The protein CTCF is required for the enhancer blocking activity of vertebrate insulators. Cell 98: 387-396 (Pubitemid 29380573)
    • (1999) Cell , vol.98 , Issue.3 , pp. 387-396
    • Bell, A.C.1    West, A.G.2    Felsenfeld, G.3
  • 8
    • 33747174553 scopus 로고    scopus 로고
    • Flanking HS-62.5 and 30 HS1, and regions upstream of the LCR, are not required for beta-globin transcription
    • DOI 10.1182/blood-2006-04-014431
    • Bender MA, Byron R, Ragoczy T, Telling A, Bulger M, Groudine M (2006) Flanking HS-62.5 and 30 HS1, and regions upstream of the LCR, are not required for beta-globin transcription. Blood 108: 1395-1401 (Pubitemid 44232043)
    • (2006) Blood , vol.108 , Issue.4 , pp. 1395-1401
    • Bender, M.A.1    Byron, R.2    Ragoczy, T.3    Telling, A.4    Bulger, M.5    Groudine, M.6
  • 9
    • 38649099445 scopus 로고    scopus 로고
    • High-Resolution Mapping and Characterization of Open Chromatin across the Genome
    • DOI 10.1016/j.cell.2007.12.014, PII S0092867407016133
    • Boyle AP, Davis S, Shulha HP, Meltzer P, Margulies EH, Weng Z, Furey TS, Crawford GE (2008) High-resolution mapping and characterization of open chromatin across the genome. Cell 132: 311-322 (Pubitemid 351172431)
    • (2008) Cell , vol.132 , Issue.2 , pp. 311-322
    • Boyle, A.P.1    Davis, S.2    Shulha, H.P.3    Meltzer, P.4    Margulies, E.H.5    Weng, Z.6    Furey, T.S.7    Crawford, G.E.8
  • 10
    • 0035477093 scopus 로고    scopus 로고
    • Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs
    • DOI 10.1101/gad.924301
    • Butler JE, Kadonaga JT (2001) Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs. Genes Dev 15: 2515-2519 (Pubitemid 32937862)
    • (2001) Genes and Development , vol.15 , Issue.19 , pp. 2515-2519
    • Butler, J.E.F.1    Kadonaga, J.T.2
  • 11
    • 0035910516 scopus 로고    scopus 로고
    • Effects of cis arrangement of chromatin insulators on enhancer-blocking activity
    • DOI 10.1126/science.291.5503.493
    • Cai HN, Shen P (2001) Effects of cis arrangement of chromatin insulators on enhancer-blocking activity. Science 291: 493-495 (Pubitemid 32097075)
    • (2001) Science , vol.291 , Issue.5503 , pp. 493-495
    • Cai, H.N.1    Shen, P.2
  • 12
    • 6344266958 scopus 로고    scopus 로고
    • Bystander gene activation by a locus control region
    • DOI 10.1038/sj.emboj.7600365
    • Cajiao I, Zhang A, Yoo EJ, Cooke NE, Liebhaber SA (2004) Bystander gene activation by a locus control region. EMBO J 23: 3854-3863 (Pubitemid 39389716)
    • (2004) EMBO Journal , vol.23 , Issue.19 , pp. 3854-3863
    • Cajiao, I.1    Zhang, A.2    Yoo, E.J.3    Cooke, N.E.4    Liebhaber, S.A.5
  • 13
  • 15
    • 0036006293 scopus 로고    scopus 로고
    • Chromatin motion is constrained by association with nuclear compartments in human cells
    • DOI 10.1016/S0960-9822(02)00695-4, PII S0960982202006954
    • Chubb JR, Boyle S, Perry P, Bickmore WA (2002) Chromatin motion is constrained by association with nuclear compartments in human cells. Curr Biol 12: 439-445 (Pubitemid 34248889)
    • (2002) Current Biology , vol.12 , Issue.6 , pp. 439-445
    • Chubb, J.R.1    Boyle, S.2    Perry, P.3    Bickmore, W.A.4
  • 16
    • 33646591544 scopus 로고    scopus 로고
    • Transcriptional Pulsing of a Developmental Gene
    • DOI 10.1016/j.cub.2006.03.092, PII S0960982206014266
    • Chubb JR, Trcek T, Shenoy SM, Singer RH (2006) Transcriptional pulsing of a developmental gene. Curr Biol 16: 1018-1025 (Pubitemid 43728209)
    • (2006) Current Biology , vol.16 , Issue.10 , pp. 1018-1025
    • Chubb, J.R.1    Trcek, T.2    Shenoy, S.M.3    Singer, R.H.4
  • 17
    • 0027254748 scopus 로고
    • A 5' element of the chicken beta-globin domain serves as an insulator in human erythroid cells and protects against position effect in drosophila
    • Chung JH, Whiteley M, Felsenfeld G (1993) A 50 element of the chicken beta-globin domain serves as an insulator in human erythroid cells and protects against position effect in Drosophila. Cell 74: 505-514 (Pubitemid 23244616)
    • (1993) Cell , vol.74 , Issue.3 , pp. 505-514
    • Chung, J.H.1    Whiteley, M.2    Felsenfeld, G.3
  • 19
    • 79952294070 scopus 로고    scopus 로고
    • A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber
    • Comet I, Schuettengruber B, Sexton T, Cavalli G (2011) A chromatin insulator driving three-dimensional Polycomb response element (PRE) contacts and Polycomb association with the chromatin fiber. Proc Natl Acad Sci USA 108: 2294-2299
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 2294-2299
    • Comet, I.1    Schuettengruber, B.2    Sexton, T.3    Cavalli, G.4
  • 22
    • 60149095014 scopus 로고    scopus 로고
    • Global analysis of the insulator binding protein CTCF in chroma-tin barrier regions reveals demarcation of active and repressive domains
    • Cuddapah S, Jothi R, Schones DE, Roh TY, Cui K, Zhao K (2009) Global analysis of the insulator binding protein CTCF in chroma-tin barrier regions reveals demarcation of active and repressive domains. Genome Res 19: 24-32
    • (2009) Genome Res , vol.19 , pp. 24-32
    • Cuddapah, S.1    Jothi, R.2    Schones, D.E.3    Roh, T.Y.4    Cui, K.5    Zhao, K.6
  • 23
    • 0042880630 scopus 로고    scopus 로고
    • Spatial organization of gene expression: The active chromatin hub
    • DOI 10.1023/A:1024922626726
    • de Laat W, Grosveld F (2003) Spatial organization of gene expression: the active chromatin hub. Chromosome Res 11 : 447-459 (Pubitemid 37041205)
    • (2003) Chromosome Research , vol.11 , Issue.5 , pp. 447-459
    • De Laat, W.1    Grosveld, F.2
  • 25
    • 0037083376 scopus 로고    scopus 로고
    • Capturing chromosome conformation
    • DOI 10.1126/science.1067799
    • Dekker J, Rippe K, Dekker M, Kleckner N (2002) Capturing chromosome conformation. Science 295: 1306-1311 (Pubitemid 34157624)
    • (2002) Science , vol.295 , Issue.5558 , pp. 1306-1311
    • Dekker, J.1    Rippe, K.2    Dekker, M.3    Kleckner, N.4
  • 26
    • 0033936743 scopus 로고    scopus 로고
    • Functional gene expression domains: Defining the functional unit of eukaryotic gene regulation
    • DOI 10.1002/1521-1878(200007)22:7<657::AID-BIES8>3.0.CO;2-2
    • Dillon N, Sabbattini P (2000) Functional gene expression domains: defining the functional unit of eukaryotic gene regulation. Bioessays 22: 657-665 (Pubitemid 30457957)
    • (2000) BioEssays , vol.22 , Issue.7 , pp. 657-665
    • Dillon, N.1    Sabbattini, P.2
  • 30
    • 0035140806 scopus 로고    scopus 로고
    • High local protein concentrations at promoters: Strategies in prokaryotic and eukaryotic cells
    • DOI 10.1002/1521-1878(200102)23:2<179::AID-BIES1025>3.0.CO;2-6
    • Droge P, Muller-Hill B (2001) High local protein concentrations at promoters: strategies in prokaryotic and eukaryotic cells. Bioessays 23: 179-183 (Pubitemid 32116651)
    • (2001) BioEssays , vol.23 , Issue.2 , pp. 179-183
    • Droge, P.1    Muller-Hill, B.2
  • 33
    • 0036094107 scopus 로고    scopus 로고
    • Conserved CTCF insulator elements flank the mouse and human beta-globin loci
    • DOI 10.1128/MCB.22.11.3820-3831.2002
    • Farrell CM, West AG, Felsenfeld G (2002) Conserved CTCF insulator elements flank the mouse and human beta-globin loci. Mol Cell Biol 22: 3820-3831 (Pubitemid 34525223)
    • (2002) Molecular and Cellular Biology , vol.22 , Issue.11 , pp. 3820-3831
    • Farrell, C.M.1    West, A.G.2    Felsenfeld, G.3
  • 34
    • 11244258156 scopus 로고    scopus 로고
    • Boundaries between chromosomal domains of X inactivation and escape bind CTCF and lack CpG methylation during early development
    • DOI 10.1016/j.devcel.2004.10.018, PII S1534580704004071
    • Filippova GN, Cheng MK, Moore JM, Truong JP, Hu YJ, Nguyen DK, Tsuchiya KD, Disteche CM (2005) Boundaries between chromosomal domains of X inactivation and escape bind CTCF and lack CpG methylation during early development. Dev Cell 8: 31-42 (Pubitemid 40058003)
    • (2005) Developmental Cell , vol.8 , Issue.1 , pp. 31-42
    • Filippova, G.N.1    Cheng, M.K.2    Moore, J.M.3    Truong, J.-P.4    Hu, Y.J.5    Nguyen, D.K.6    Tsuchiya, K.D.7    Disteche, C.M.8
  • 35
    • 0025107556 scopus 로고
    • A deletion of the human beta-globin locus activation region causes a major alteration in chromatin structure and replication across the entire beta-globin locus
    • Forrester WC, Epner E, Driscoll MC, Enver T, Brice M, Papayannopoulou T, Groudine M (1990) A deletion of the human beta-globin locus activation region causes a major alteration in chromatin structure and replication across the entire beta-globin locus. Genes Dev 4: 1637-1649
    • (1990) Genes Dev , vol.4 , pp. 1637-1649
    • Forrester, W.C.1    Epner, E.2    Driscoll, M.C.3    Enver, T.4    Brice, M.5    Papayannopoulou, T.6    Groudine, M.7
  • 36
    • 0033638334 scopus 로고    scopus 로고
    • A chromatin insulator determines the nuclear localization of DNA
    • Gerasimova TI, Byrd K, Corces VG (2000) A chromatin insulator determines the nuclear localization of DNA. Mol Cell 6: 1025-1035
    • (2000) Mol Cell , vol.6 , pp. 1025-1035
    • Gerasimova, T.I.1    Byrd, K.2    Corces, V.G.3
  • 37
    • 0345039879 scopus 로고    scopus 로고
    • Global chromosome positions are transmitted through mitosis in mammalian cells
    • DOI 10.1016/S0092-8674(03)00189-2
    • Gerlich D, Beaudouin J, Kalbfuss B, Daigle N, Eils R, Ellenberg J (2003) Global chromosome positions are transmitted through mitosis in mammalian cells. Cell 112: 751-764 (Pubitemid 36378880)
    • (2003) Cell , vol.112 , Issue.6 , pp. 751-764
    • Gerlich, D.1    Beaudouin, J.2    Kalbfuss, B.3    Daigle, N.4    Eils, R.5    Ellenberg, J.6
  • 38
    • 0023663887 scopus 로고
    • Position-independent, high-level expression of the human beta-globin gene in transgenic mice
    • Grosveld F, van Assendelft GB, Greaves DR, Kollias G (1987) Position-independent, high-level expression of the human beta-globin gene in transgenic mice. Cell 51: 975-985
    • (1987) Cell , vol.51 , pp. 975-985
    • Grosveld, F.1    Van Assendelft, G.B.2    Greaves, D.R.3    Kollias, G.4
  • 42
    • 0034713275 scopus 로고    scopus 로고
    • CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus
    • DOI 10.1038/35013106
    • Hark AT, Schoenherr CJ, Katz DJ, Ingram RS, Levorse JM, Tilghman SM (2000) CTCF mediates methylation-sensitive enhancer-blocking activity at the H19/Igf2 locus. Nature 405: 486-489 (Pubitemid 30367428)
    • (2000) Nature , vol.405 , Issue.6785 , pp. 486-489
    • Hark, A.T.1    Schoenherr, C.J.2    Katz, D.J.3    Ingram, R.S.4    Levorse, J.M.5    Tilghman, S.M.6
  • 45
    • 0024368136 scopus 로고
    • Two closely spaced promoters are equally activated by a remote enhancer: Evidence against a scanning model for enhancer action
    • Heuchel R, Matthias P, Schaffner W (1989) Two closely spaced promoters are equally activated by a remote enhancer: evidence against a scanning model for enhancer action. Nucleic Acids Res 17: 8931-8947 (Pubitemid 20003162)
    • (1989) Nucleic Acids Research , vol.17 , Issue.22 , pp. 8931-8947
    • Heuchel, R.1    Matthias, P.2    Schaffner, W.3
  • 47
    • 11244328520 scopus 로고    scopus 로고
    • Loss of silent-chromatin looping and impaired imprinting of DLX5 in Rett syndrome
    • DOI 10.1038/ng1491
    • Horike S, Cai S, Miyano M, Cheng JF, Kohwi-Shigematsu T (2005) Loss of silent-chromatin looping and impaired imprinting of DLX5 in Rett syndrome. Nat Genet 37: 31-40 (Pubitemid 40070937)
    • (2005) Nature Genetics , vol.37 , Issue.1 , pp. 31-40
    • Horike, S.-I.1    Cai, S.2    Miyano, M.3    Cheng, J.-F.4    Kohwi-Shigematsu, T.5
  • 48
    • 0026027982 scopus 로고
    • A position-effect assay for boundaries of higher order chromosomal domains
    • Kellum R, Schedl P (1991) A position-effect assay for boundaries of higher order chromosomal domains. Cell 64: 941-950 (Pubitemid 121001181)
    • (1991) Cell , vol.64 , Issue.5 , pp. 941-950
    • Kellum, R.1    Schedl, P.2
  • 49
    • 0026711089 scopus 로고
    • A group of scs elements function as domain boundaries in an enhancer-blocking assay
    • Kellum R, Schedl P (1992) A group of scs elements function as domain boundaries in an enhancer-blocking assay. Mol Cell Biol 12: 2424-2431
    • (1992) Mol Cell Biol , vol.12 , pp. 2424-2431
    • Kellum, R.1    Schedl, P.2
  • 50
    • 11144339384 scopus 로고    scopus 로고
    • Long-range control of gene expression: Emerging mechanisms and disruption in disease
    • DOI 10.1086/426833
    • Kleinjan DA, van Heyningen V (2005) Long-range control of gene expression: emerging mechanisms and disruption in disease. Am J Hum Genet 76: 8-32 (Pubitemid 40023762)
    • (2005) American Journal of Human Genetics , vol.76 , Issue.1 , pp. 8-32
    • Kleinjan, D.A.1    Van Heyningen, V.2
  • 55
    • 16244398049 scopus 로고    scopus 로고
    • Long-range interactions between three transcriptional enhancers, active Vkappa gene promoters, and a 30 boundary sequence spanning 46 kilobases
    • DOI 10.1128/MCB.25.8.3220-3231.2005
    • Liu Z, Garrard WT (2005) Long-range interactions between three transcriptional enhancers, active Vkappa gene promoters, and a 30 boundary sequence spanning 46 kilobases. Mol Cell Biol 25: 3220-3231 (Pubitemid 40464323)
    • (2005) Molecular and Cellular Biology , vol.25 , Issue.8 , pp. 3220-3231
    • Liu, Z.1    Garrard, W.T.2
  • 57
    • 50249089622 scopus 로고    scopus 로고
    • Enhancer-promoter communication is regulated by insulator pairing in a Drosophila model bigenic locus
    • Maksimenko O, Golovnin A, Georgiev P (2008) Enhancer-promoter communication is regulated by insulator pairing in a Drosophila model bigenic locus. Mol Cell Biol 28: 5469-5477
    • (2008) Mol Cell Biol , vol.28 , pp. 5469-5477
    • Maksimenko, O.1    Golovnin, A.2    Georgiev, P.3
  • 58
    • 0031931429 scopus 로고    scopus 로고
    • Polycomb group repression is blocked by the Drosophila suppressor of Hairy-wing [SU(HW)] insulator
    • Mallin DR, Myung JS, Patton JS, Geyer PK (1998) Polycomb group repression is blocked by the Drosophila suppressor of Hairy-wing [su(Hw)] insulator. Genetics 148: 331-339 (Pubitemid 28063498)
    • (1998) Genetics , vol.148 , Issue.1 , pp. 331-339
    • Mallin, D.R.1    Myung, J.S.2    Patton, J.S.3    Geyer, P.K.4
  • 59
    • 77955393744 scopus 로고    scopus 로고
    • Stable morphology, but dynamic internal reorganisation, of interphase human chromosomes in living cells
    • Muller I, Boyle S, Singer RH, Bickmore WA, Chubb JR (2010) Stable morphology, but dynamic internal reorganisation, of interphase human chromosomes in living cells. PLoS One 5: e11560
    • (2010) PLoS One , vol.5
    • Muller, I.1    Boyle, S.2    Singer, R.H.3    Bickmore, W.A.4    Chubb, J.R.5
  • 63
    • 0032519586 scopus 로고    scopus 로고
    • Different core promoters possess distinct regulatory activities in the Drosophila embryo
    • Ohtsuki S, Levine M, Cai HN (1998) Different core promoters possess distinct regulatory activities in the Drosophila embryo. Genes Dev 12: 547-556 (Pubitemid 28101017)
    • (1998) Genes and Development , vol.12 , Issue.4 , pp. 547-556
    • Ohtsuki, S.1    Levine, M.2    Cai, H.N.3
  • 64
    • 0141730403 scopus 로고    scopus 로고
    • The beta-globin nuclear compartment in development and erythroid differentiation
    • DOI 10.1038/ng1244
    • Palstra RJ, Tolhuis B, Splinter E, Nijmeijer R, Grosveld F, de Laat W (2003) The beta-globin nuclear compartment in development and erythroid differentiation. Nat Genet 35: 190-194 (Pubitemid 37187640)
    • (2003) Nature Genetics , vol.35 , Issue.2 , pp. 190-194
    • Palstra, R.-J.1    Tolhuis, B.2    Splinter, E.3    Nijmeijer, R.4    Grosveld, F.5    De Laat, W.6
  • 66
    • 0022447855 scopus 로고
    • Gene regulation by proteins acting nearby and at a distance
    • Ptashne M (1986) Gene regulation by proteins acting nearby and at a distance. Nature 322: 697-701 (Pubitemid 16074119)
    • (1986) Nature , vol.322 , Issue.6081 , pp. 697-701
    • Ptashne, M.1
  • 69
    • 0028801067 scopus 로고
    • Action at a distance: DNA-looping and initiation of transcription
    • Rippe K, von Hippel PH, Langowski J (1995) Action at a distance: DNA-looping and initiation of transcription. Trends Biochem Sci 20: 500-506
    • (1995) Trends Biochem Sci , vol.20 , pp. 500-506
    • Rippe, K.1    Von Hippel, P.H.2    Langowski, J.3
  • 70
    • 79953176250 scopus 로고    scopus 로고
    • Large-scale analysis of the regulatory architecture of the mouse genome with a transposon-associated sensor
    • Ruf S, Symmons O, Uslu VV, Dolle D, Hot C, Ettwiller L, Spitz F (2011) Large-scale analysis of the regulatory architecture of the mouse genome with a transposon-associated sensor. Nat Genet 43: 379-386
    • (2011) Nat Genet , vol.43 , pp. 379-386
    • Ruf, S.1    Symmons, O.2    Uslu, V.V.3    Dolle, D.4    Hot, C.5    Ettwiller, L.6    Spitz, F.7
  • 71
    • 0031796378 scopus 로고    scopus 로고
    • Substitution of the human beta-spectrin promoter for the human (A)beta- globin promoter prevents silencing of a linked human beta-globin gene in transgenic mice
    • Sabatino DE, Cline AP, Gallagher PG, Garrett LJ, Stamatoyannopoulos G, Forget BG, Bodine DM (1998) Substitution of the human beta-spectrin promoter for the human agamma-globin promoter prevents silencing of a linked human beta-globin gene in transgenic mice. Mol Cell Biol 18: 6634-6640 (Pubitemid 28500552)
    • (1998) Molecular and Cellular Biology , vol.18 , Issue.11 , pp. 6634-6640
    • Sabatino, D.E.1    Cline, A.P.2    Gallagher, P.G.3    Garrett, L.J.4    Stamatoyannopoulos, G.5    Forget, B.G.6    Bodine, D.M.7
  • 72
    • 0030959781 scopus 로고    scopus 로고
    • Chromatin insulator elements block the silencing of a target gene by the Drosophila polycomb response element (PRE) but allow trans interactions between PREs on different chromosomes
    • Sigrist CJ, Pirrotta V (1997) Chromatin insulator elements block the silencing of a target gene by the Drosophila polycomb response element (PRE) but allow trans interactions between PREs on different chromosomes. Genetics 147: 209-221 (Pubitemid 27385549)
    • (1997) Genetics , vol.147 , Issue.1 , pp. 209-221
    • Sigrist, C.J.A.1    Pirrotta, V.2
  • 73
    • 33750212321 scopus 로고    scopus 로고
    • Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C)
    • DOI 10.1038/ng1896, PII NG1896
    • Simonis M, Klous P, Splinter E, Moshkin Y, Willemsen R, de Wit E, van Steensel B, de Laat W (2006) Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C). Nat Genet 38: 1348-1354 (Pubitemid 44646300)
    • (2006) Nature Genetics , vol.38 , Issue.11 , pp. 1348-1354
    • Simonis, M.1    Klous, P.2    Splinter, E.3    Moshkin, Y.4    Willemsen, R.5    De Wit, E.6    Van Steensel, B.7    De Laat, W.8
  • 74
    • 35748956435 scopus 로고    scopus 로고
    • An evaluation of 3C-based methods to capture DNA interactions
    • DOI 10.1038/nmeth1114, PII NMETH1114
    • Simonis M, Kooren J, de Laat W (2007) An evaluation of 3C-based methods to capture DNA interactions. Nat Methods 4: 895-901 (Pubitemid 350042374)
    • (2007) Nature Methods , vol.4 , Issue.11 , pp. 895-901
    • Simonis, M.1    Kooren, J.2    De Laat, W.3
  • 75
    • 5444237577 scopus 로고    scopus 로고
    • Long-range intrachromosomal interactions in the T helper type 2 cytokine locus
    • DOI 10.1038/ni1115
    • Spilianakis CG, Flavell RA (2004) Long-range intrachromosomal interactions in the T helper type 2 cytokine locus. Nat Immunol 5: 1017-1027 (Pubitemid 41057721)
    • (2004) Nature Immunology , vol.5 , Issue.10 , pp. 1017-1027
    • Spilianakis, C.G.1    Flavell, R.A.2
  • 76
    • 0038613098 scopus 로고    scopus 로고
    • A global control region defines a chromosomal regulatory landscape containing the HoxD cluster
    • DOI 10.1016/S0092-8674(03)00310-6
    • Spitz F, Gonzalez F, Duboule D (2003) A global control region defines a chromosomal regulatory landscape containing the HoxD cluster. Cell 113: 405-417 (Pubitemid 36556121)
    • (2003) Cell , vol.113 , Issue.3 , pp. 405-417
    • Spitz, F.1    Gonzalez, F.2    Duboule, D.3
  • 78
    • 78650458168 scopus 로고    scopus 로고
    • Mapping of long-range associations throughout the fission yeast genome reveals global genome organization linked to transcriptional regulation
    • Tanizawa H, Iwasaki O, Tanaka A, Capizzi JR, Wickramasinghe P, Lee M, Fu Z, Noma K (2010) Mapping of long-range associations throughout the fission yeast genome reveals global genome organization linked to transcriptional regulation. Nucleic Acids Res 38: 8164-8177
    • (2010) Nucleic Acids Res , vol.38 , pp. 8164-8177
    • Tanizawa, H.1    Iwasaki, O.2    Tanaka, A.3    Capizzi, J.R.4    Wickramasinghe, P.5    Lee, M.6    Fu, Z.7    Noma, K.8
  • 80
    • 0036923833 scopus 로고    scopus 로고
    • Looping and interaction between hypersensitive sites in the active beta-globin locus
    • DOI 10.1016/S1097-2765(02)00781-5
    • Tolhuis B, Palstra RJ, Splinter E, Grosveld F, de Laat W (2002) Looping and interaction between hypersensitive sites in the active beta-globin locus. Mol Cell 10: 1453-1465 (Pubitemid 36050885)
    • (2002) Molecular Cell , vol.10 , Issue.6 , pp. 1453-1465
    • Tolhuis, B.1    Palstra, R.-J.2    Splinter, E.3    Grosveld, F.4    De Laat, W.5
  • 83
    • 0019223735 scopus 로고
    • Gamma-beta-Thalassaemia studies showing that deletion of the gamma-and delta-genes influences beta-globin gene expression in man
    • Van der Ploeg LH, Konings A, Oort M, Roos D, Bernini L, Flavell RA (1980) gamma-beta-Thalassaemia studies showing that deletion of the gamma-and delta-genes influences beta-globin gene expression in man. Nature 283: 637-642 (Pubitemid 10099991)
    • (1980) Nature , vol.283 , Issue.5748 , pp. 637-642
    • Van Der Ploeg, L.H.T.1    Konings, A.2    Oort, M.3
  • 84
    • 34247272882 scopus 로고    scopus 로고
    • Long-range chromosomal interactions regulate the timing of the transition between poised and active gene expression
    • DOI 10.1038/sj.emboj.7601654, PII 7601654
    • Vernimmen D, De Gobbi M, Sloane-Stanley JA, Wood WG, Higgs DR (2007) Long-range chromosomal interactions regulate the timing of the transition between poised and active gene expression. EMBO J 26: 2041-2051 (Pubitemid 46625789)
    • (2007) EMBO Journal , vol.26 , Issue.8 , pp. 2041-2051
    • Vernimmen, D.1    Gobbi, M.D.2    Sloane-Stanley, J.A.3    Wood, W.G.4    Higgs, D.R.5
  • 87
    • 70249088327 scopus 로고    scopus 로고
    • Genomic views of distant-acting enhancers
    • Visel A, Rubin EM, Pennacchio LA (2009b) Genomic views of distant-acting enhancers. Nature 461: 199-205
    • (2009) Nature , vol.461 , pp. 199-205
    • Visel, A.1    Rubin, E.M.2    Pennacchio, L.A.3
  • 88
    • 0020609205 scopus 로고
    • The SV40 72 bp repeat preferentially potentiates transcription starting from proximal natural or substitute promoter elements
    • Wasylyk B, Wasylyk C, Augereau P, Chambon P (1983) The SV40 72 bp repeat preferentially potentiates transcription starting from proximal natural or substitute promoter elements. Cell 32: 503-514 (Pubitemid 13127823)
    • (1983) Cell , vol.32 , Issue.2 , pp. 503-514
    • Wasylyk, B.1    Wasylyk, C.2    Augereau, P.3    Chambon, P.4
  • 90
    • 0029051646 scopus 로고
    • Transcription complex stability and chromatin dynamics in vivo
    • Wijgerde M, Grosveld F, Fraser P (1995) Transcription complex stability and chromatin dynamics in vivo. Nature 377: 209-213
    • (1995) Nature , vol.377 , pp. 209-213
    • Wijgerde, M.1    Grosveld, F.2    Fraser, P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.