메뉴 건너뛰기




Volumn 61, Issue 11, 2011, Pages 2640-2645

Nocardiopsis flavescens sp. nov., an actinomycete isolated from marine sediment

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 80355132406     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.027987-0     Document Type: Article
Times cited : (20)

References (49)
  • 1
    • 0028286543 scopus 로고
    • Nocardiopsis halophila sp. nov., a new halophilic actinomycete isolated from soil
    • Al-Tai, A. M. & Ruan, J.-S. (1994). Nocardiopsis halophila sp. nov., a new halophilic actinomycete isolated from soil. Int J Syst Bacteriol 44, 474-478.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 474-478
    • Al-Tai, A.M.1    Ruan, J.-S.2
  • 4
    • 0033803806 scopus 로고    scopus 로고
    • Nocardiopsis kunsanensis sp. nov., a moderately halophilic actinomycete isolated from a saltern
    • Chun, J., Bae, K. S., Moon, E. Y., Jung, S.-O., Lee, H. K. & Kim, S.-J. (2000). Nocardiopsis kunsanensis sp. nov., a moderately halophilic actinomycete isolated from a saltern. Int J Syst Evol Microbiol 50, 1909-1913.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 1909-1913
    • Chun, J.1    Bae, K.S.2    Moon, E.Y.3    Jung, S.-O.4    Lee, H.K.5    Kim, S.-J.6
  • 6
    • 0014713693 scopus 로고
    • The quantitative measurement of DNA hybridization from renaturation rates
    • De Ley, J., Cattoir, H. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
    • (1970) Eur J Biochem , vol.12 , pp. 133-142
    • de Ley, J.1    Cattoir, H.2    Reynaerts, A.3
  • 7
    • 0033951738 scopus 로고    scopus 로고
    • Nocardiopsis tropica sp. nov., Nocardiopsis trehalosi sp. nov., nom. rev. and Nocardiopsis dassonvillei subsp. albirubida subsp. nov., comb. nov
    • Evtushenko, L. I., Taran, V. V., Akimov, V. N., Kroppenstedt, R. M., Tiedje, J. M. & Stackebrandt, E. (2000). Nocardiopsis tropica sp. nov., Nocardiopsis trehalosi sp. nov., nom. rev. and Nocardiopsis dassonvillei subsp. albirubida subsp. nov., comb. nov. Int J Syst Evol Microbiol 50, 73-81.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 73-81
    • Evtushenko, L.I.1    Taran, V.V.2    Akimov, V.N.3    Kroppenstedt, R.M.4    Tiedje, J.M.5    Stackebrandt, E.6
  • 8
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 10
    • 0025176871 scopus 로고
    • Chemotaxonomy and numerical taxonomy of the genus Nocardiopsis Meyer 1976
    • Grund, E. & Kroppenstedt, R. M. (1990). Chemotaxonomy and numerical taxonomy of the genus Nocardiopsis Meyer 1976. Int J Syst Bacteriol 40, 5-11.
    • (1990) Int J Syst Bacteriol , vol.40 , pp. 5-11
    • Grund, E.1    Kroppenstedt, R.M.2
  • 11
    • 0021077093 scopus 로고
    • A rapid analysis for chemical grouping of aerobic actinomycetes
    • Hasegawa, T., Takizawa, M. & Tanida, S. (1983). A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29, 319-322.
    • (1983) J Gen Appl Microbiol , vol.29 , pp. 319-322
    • Hasegawa, T.1    Takizawa, M.2    Tanida, S.3
  • 13
    • 0020549589 scopus 로고
    • Studies on the spectrophotometric determination of DNA hybridization from renaturation rates
    • Huß, V. A. R., Festl, H. & Schleifer, K. H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
    • (1983) Syst Appl Microbiol , vol.4 , pp. 184-192
    • Huß, V.A.R.1    Festl, H.2    Schleifer, K.H.3
  • 14
    • 0026503231 scopus 로고
    • Basic computer program for evaluation of spectroscopic DNA renaturation data from Gilford System 2600 spectrophotometer on a PC/XT/AT type personal computer
    • Jahnke, K.-D. (1992). Basic computer program for evaluation of spectroscopic DNA renaturation data from Gilford System 2600 spectrophotometer on a PC/XT/AT type personal computer. J Microbiol Methods 15, 61-73.
    • (1992) J Microbiol Methods , vol.15 , pp. 61-73
    • Jahnke, K.-D.1
  • 15
    • 0029799185 scopus 로고    scopus 로고
    • Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa
    • Kämpfer, P. & Kroppenstedt, R. M. (1996). Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42, 989-1005.
    • (1996) Can J Microbiol , vol.42 , pp. 989-1005
    • Kämpfer, P.1    Kroppenstedt, R.M.2
  • 16
    • 0036206825 scopus 로고    scopus 로고
    • Nocardiopsis compostus sp. nov., from the atmosphere of a composting facility
    • Kämpfer, P., Busse, H.-J. & Rainey, F. A. (2002). Nocardiopsis compostus sp. nov., from the atmosphere of a composting facility. Int J Syst Evol Microbiol 52, 621-627.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 621-627
    • Kämpfer, P.1    Busse, H.-J.2    Rainey, F.A.3
  • 18
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 19
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of anurans
    • Kluge, A. G. & Farris, J. S. (1969). Quantitative phyletics and the evolution of anurans. Syst Zool 18, 1-32.
    • (1969) Syst Zool , vol.18 , pp. 1-32
    • Kluge, A.G.1    Farris, J.S.2
  • 20
    • 0000608592 scopus 로고
    • The genus Nocardiopsis
    • 2nd edn, Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K.-H. Schleifer. New York: Springer
    • Kroppenstedt, R. M. (1992). The genus Nocardiopsis. In The Prokaryotes, 2nd edn, pp. 1139-1156. Edited by A. Balows, H. G. Trüper, M. Dworkin, W. Harder & K.-H. Schleifer. New York: Springer.
    • (1992) The Prokaryotes , pp. 1139-1156
    • Kroppenstedt, R.M.1
  • 22
    • 55849099328 scopus 로고    scopus 로고
    • The family Nocardiopsaceae
    • 3rd edn, Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer
    • Kroppenstedt, R. M. & Evtushenko, L. I. (2006). The family Nocardiopsaceae. In The Prokaryotes: a Handbook on the Biology of Bacteria, 3rd edn, vol. 3, pp. 754-795. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
    • (2006) The Prokaryotes: A Handbook On the Biology of Bacteria , vol.3 , pp. 754-795
    • Kroppenstedt, R.M.1    Evtushenko, L.I.2
  • 23
    • 0002044672 scopus 로고
    • Chemical composition as a criterion in the classification of aerobic actinomycetes
    • Lechevalier, M. P. & Lechevalier, H. A. (1970). Chemical composition as a criterion in the classification of aerobic actinomycetes. Int J Syst Bacteriol 20, 435-443.
    • (1970) Int J Syst Bacteriol , vol.20 , pp. 435-443
    • Lechevalier, M.P.1    Lechevalier, H.A.2
  • 24
    • 0001551934 scopus 로고
    • The chemotaxonomy of actinomycetes
    • (Special Publication No. 6), Edited by A. Dietz & D. W. Thayer. Arlington, VA: Society for Industrial Microbiology
    • Lechevalier, M. P. & Lechevalier, H. A. (1980). The chemotaxonomy of actinomycetes. In Actinomycete Taxonomy (Special Publication no. 6), pp. 227-291, Edited by A. Dietz & D. W. Thayer. Arlington, VA: Society for Industrial Microbiology.
    • (1980) Actinomycete Taxonomy , pp. 227-291
    • Lechevalier, M.P.1    Lechevalier, H.A.2
  • 25
    • 0000888174 scopus 로고
    • Chemotaxonomy of aerobic actinomycetes: Phospholipid composition
    • Lechevalier, M. P., De Biévre, C. & Lechevalier, H. A. (1977). Chemotaxonomy of aerobic actinomycetes: phospholipid composition. Biochem Syst Ecol 5, 249-260.
    • (1977) Biochem Syst Ecol , vol.5 , pp. 249-260
    • Lechevalier, M.P.1    de Biévre, C.2    Lechevalier, H.A.3
  • 26
    • 0035065812 scopus 로고    scopus 로고
    • Saccharopolyspora flava sp. nov. and Saccharopolyspora thermophila sp. nov., novel actinomycetes from soil
    • Lu, Z., Liu, Z., Wang, L., Zhang, Y., Qi, W. & Goodfellow, M. (2001). Saccharopolyspora flava sp. nov. and Saccharopolyspora thermophila sp. nov., novel actinomycetes from soil. Int J Syst Evol Microbiol 51, 319-325.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 319-325
    • Lu, Z.1    Liu, Z.2    Wang, L.3    Zhang, Y.4    Qi, W.5    Goodfellow, M.6
  • 27
    • 73649209034 scopus 로고
    • Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature
    • Marmur, J. & Doty, P. (1962). Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature. J Mol Biol 5, 109-118.
    • (1962) J Mol Biol , vol.5 , pp. 109-118
    • Marmur, J.1    Doty, P.2
  • 28
    • 0017192026 scopus 로고
    • Nocardiopsis, a new genus of the order Actinomycetales
    • Meyer, J. (1976). Nocardiopsis, a new genus of the order Actinomycetales. Int J Syst Bacteriol 26, 487-493.
    • (1976) Int J Syst Bacteriol , vol.26 , pp. 487-493
    • Meyer, J.1
  • 29
    • 1842494919 scopus 로고
    • The genus Nocardiopsis Meyer 1976
    • 9th edn, Edited by J. G. Holt, N. R. Krieg, P. H. A. Sneath, J. T. Staley & S. T. Williams. Baltimore: Williams & Wilkins
    • Meyer, J. (1994). The genus Nocardiopsis Meyer 1976. In Bergey's Manual of Determinative Bacteriology, 9th edn, pp. 2562-2568. Edited by J. G. Holt, N. R. Krieg, P. H. A. Sneath, J. T. Staley & S. T. Williams. Baltimore: Williams & Wilkins.
    • (1994) Bergey's Manual of Determinative Bacteriology , pp. 2562-2568
    • Meyer, J.1
  • 30
    • 0016684892 scopus 로고
    • Differentiation of Mycobacterium, Nocardia, and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates
    • Minnikin, D. E., Alshamaony, L. & Goodfellow, M. (1975). Differentiation of Mycobacterium, Nocardia, and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates. J Gen Microbiol 88, 200-204.
    • (1975) J Gen Microbiol , vol.88 , pp. 200-204
    • Minnikin, D.E.1    Alshamaony, L.2    Goodfellow, M.3
  • 32
    • 0015357317 scopus 로고
    • Chemotaxonomic characters and classification of some nocardioform bacteria
    • Mordarska, H., Mordarski, M. & Goodfellow, M. (1972).Chemotaxonomic characters and classification of some nocardioform bacteria. J Gen Microbiol 71, 77-86.
    • (1972) J Gen Microbiol , vol.71 , pp. 77-86
    • Mordarska, H.1    Mordarski, M.2    Goodfellow, M.3
  • 33
    • 0035462377 scopus 로고    scopus 로고
    • Isolation of toxigenic Nocardiopsis strains from indoor environments and description of two new Nocardiopsis species, N. exhalans sp. nov. and N. umidischolae sp. nov
    • Peltola, J. S. P., Andersson, M. A., Kämpfer, P., Auling, G., Kroppenstedt, R. M., Busse, H.-J., Salkinoja-Salonen, M. S. & Rainey, F. A. (2001). Isolation of toxigenic Nocardiopsis strains from indoor environments and description of two new Nocardiopsis species, N. exhalans sp. nov. and N. umidischolae sp. nov. Appl Environ Microbiol 67, 4293-4304.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 4293-4304
    • Peltola, J.S.P.1    Andersson, M.A.2    Kämpfer, P.3    Auling, G.4    Kroppenstedt, R.M.5    Busse, H.-J.6    Salkinoja-Salonen, M.S.7    Rainey, F.A.8
  • 34
    • 0029799968 scopus 로고    scopus 로고
    • The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: Proposal of Nocardiopsaceae fam. nov
    • Rainey, F. A., Ward-Rainey, N., Kroppenstedt, R. M. & Stackebrandt, E. (1996). The genus Nocardiopsis represents a phylogenetically coherent taxon and a distinct actinomycete lineage: proposal of Nocardiopsaceae fam. nov. Int J Syst Bacteriol 46, 1088-1092.
    • (1996) Int J Syst Bacteriol , vol.46 , pp. 1088-1092
    • Rainey, F.A.1    Ward-Rainey, N.2    Kroppenstedt, R.M.3    Stackebrandt, E.4
  • 36
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 39
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling, E. B. & Gottlieb, D. (1966). Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16, 313-340.
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 40
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 41
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 42
    • 0000770675 scopus 로고
    • International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
    • other authors
    • Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 463-464
    • Wayne, L.G.1    Brenner, D.J.2    Colwell, R.R.3    Grimont, P.A.D.4    Kandler, O.5    Krichevsky, M.I.6    Moore, L.H.7    Moore, W.E.C.8    Murray, R.G.E.9
  • 44
    • 52449092491 scopus 로고    scopus 로고
    • Nocardiopsis valliformis sp. nov., an alkaliphilic actinomycete isolated from alkali lake soil in China
    • Yang, R., Zhang, L. P., Guo, L. G., Shi, N., Lu, Z. & Zhang, X. (2008). Nocardiopsis valliformis sp. nov., an alkaliphilic actinomycete isolated from alkali lake soil in China. Int J Syst Evol Microbiol 58, 1542-1546.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1542-1546
    • Yang, R.1    Zhang, L.P.2    Guo, L.G.3    Shi, N.4    Lu, Z.5    Zhang, X.6
  • 46
    • 0030853114 scopus 로고    scopus 로고
    • Description of Nocardiopsis synnemataformans sp. nov., elevation of Nocardiopsis alba subsp. prasina to Nocardiopsis prasina comb. nov., and designation of Nocardiopsis antarctica and Nocardiopsis alborubida as later subjective synonyms of Nocardiopsis dassonvillei
    • Yassin, A. F., Rainey, F. A., Burghardt, J., Gierth, D., Ungerechts, J., Lux, I., Seifert, P., Bal, C. & Schaal, K. P. (1997). Description of Nocardiopsis synnemataformans sp. nov., elevation of Nocardiopsis alba subsp. prasina to Nocardiopsis prasina comb. nov., and designation of Nocardiopsis antarctica and Nocardiopsis alborubida as later subjective synonyms of Nocardiopsis dassonvillei. Int J Syst Bacteriol 47, 983-988.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 983-988
    • Yassin, A.F.1    Rainey, F.A.2    Burghardt, J.3    Gierth, D.4    Ungerechts, J.5    Lux, I.6    Seifert, P.7    Bal, C.8    Schaal, K.P.9
  • 47
  • 48
    • 0042311198 scopus 로고    scopus 로고
    • Nocardia caishijiensis sp. nov., a novel soil actinomycete
    • Zhang, J., Liu, Z. & Goodfellow, M. (2003). Nocardia caishijiensis sp. nov., a novel soil actinomycete. Int J Syst Evol Microbiol 53, 999-1004.
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 999-1004
    • Zhang, J.1    Liu, Z.2    Goodfellow, M.3
  • 49
    • 67651165968 scopus 로고    scopus 로고
    • An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa
    • Zhi, X.-Y., Li, W.-J. & Stackebrandt, E. (2009). An update of the structure and 16S rRNA gene sequence-based definition of higher ranks of the class Actinobacteria, with the proposal of two new suborders and four new families and emended descriptions of the existing higher taxa. Int J Syst Evol Microbiol 59, 589-608.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 589-608
    • Zhi, X.-Y.1    Li, W.-J.2    Stackebrandt, E.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.