Effect of oxygen and temperature on the dynamic of the dominant bacterial populations of pig manure and on the persistence of pig-associated genetic markers, assessed in river water microcosms

Journal of Applied Microbiology

Volumn 111, Issue 5, 2011, Pages 1159-1175

  Marti, R ^a,b   Mieszkin, S ^c   Solecki, O ^a,b   Pourcher, A M ^a,b   Hervio Heath, D ^c   Gourmelon, M ^c  

^a Cemagref   (France)

^b UNIVERSITÉ EUROPÉENNE DE BRETAGNE   (France)

^c IFREMER   (France)

Author keywords

Lactobacillus amylovorus; Microbial source tracking; Oxygen; Persistence; Pig associated Bacteroidales markers; Quantitative real time PCR; River water; Temperature

Indexed keywords

BACTERIOLOGY; CAPILLARY ELECTROPHORESIS; ESCHERICHIA COLI; FERTILIZERS; MAMMALS; MANURES; OXYGEN; POLYMERASE CHAIN REACTION; RIVERS;

AEROBIC CONDITION; BACTERIAL POPULATION; LACTOBACILLUS AMYLOVORU; MICROBIAL SOURCE TRACKING; PERSISTENCE; PIG MANURES; PIG-ASSOCIATED BACTEROIDALE MARKER; QUANTITATIVE REAL-TIME PCR; REAL-TIME PCR; RIVER WATER;

TEMPERATURE;

OXYGEN; RIVER WATER;

ASSESSMENT METHOD; BACTERIUM; COLIFORM BACTERIUM; CONCENTRATION (COMPOSITION); ELECTROKINESIS; ESTIMATION METHOD; GENETIC MARKER; MANURE; MICROCOSM; OXIC CONDITIONS; OXYGEN; PIG; POLYMERASE CHAIN REACTION; POLYMORPHISM; POPULATION STRUCTURE; RIVER WATER; SENSITIVITY ANALYSIS; TEMPERATURE EFFECT;

ARTICLE; BAC GENE; BACILLUS; BACTERIAL GENE; BACTEROIDES; CAPILLARY ELECTROPHORESIS; CONTROLLED STUDY; ESCHERICHIA COLI; GENETIC MARKER; LACTOBACILLUS; LACTOBACILLUS AMYLOVORUS; MANURE; MICROBIAL COMMUNITY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PIG 2 BAC GENE; PREVOTELLA; REAL TIME POLYMERASE CHAIN REACTION; SWINE; TEMPERATURE SENSITIVITY;

BACILLUS (BACTERIUM); BACTERIA (MICROORGANISMS); BACTEROIDALES; BACTEROIDES; ESCHERICHIA COLI; LACTOBACILLUS; LACTOBACILLUS AMYLOVORUS; PREVOTELLA; STREPTOCOCCUS; SUIDAE;

EID: 80054739843     PISSN: 13645072     EISSN: 13652672     Source Type: Journal    
DOI: 10.1111/j.1365-2672.2011.05131.x     Document Type: Article

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