A human sterile alpha motif domain polymerizome

Protein Science

Volumn 20, Issue 10, 2011, Pages 1697-1706

  Knight, Mary Jane ^a   Leettola, Catherine ^a   Gingery, Mari ^a   Li, Hao ^a   Bowie, James U ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

ANKS3; Atherin; BicaudalC1; Caskin; Green fluorescent protein; Kazrin; L3MBTL; Liprin; Polycystic kidney disease; Polymer; SAM domain

Indexed keywords

ANKS3; ATHERIN; BICAUDALC1; CASKIN1; CASKIN2; GREEN FLUORESCENT PROTEIN; KAZRIN; L3MBTL3; L3MBTL4; LBP; LIPRINB1; LIPRINB2; PEPTIDE LIBRARY; POLYMER; SAMD8; SAMD9; STIM2; UNCLASSIFIED DRUG;

ARTICLE; ELECTRON MICROSCOPY; FLUORESCENCE; HIGH THROUGHPUT SCREENING; HUMAN; HUMAN GENOME; POLYMERIZATION; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN MOTIF; PROTEIN PURIFICATION; SEQUENCE ANALYSIS; SOLUBILITY; STERILE ALPHA MOTIF;

AMINO ACID MOTIFS; HUMANS; PROTEIN MULTIMERIZATION; PROTEIN STRUCTURE, TERTIARY; PROTEINS; RECOMBINANT FUSION PROTEINS;

EUKARYOTA;

EID: 80053153316     PISSN: 09618368     EISSN: 1469896X     Source Type: Journal    
DOI: 10.1002/pro.703     Document Type: Article

References (39)

1. Pawson T, Raina M, Nash P (2002) Interaction domains: from simple binding events to complex cellular behavior. FEBS Lett 513:2-10. (Pubitemid 34242971)
2. Qiao F, Bowie JU (2005) The many faces of SAM. Sci STKE 2005:re7.
3. Kim CA, Phillips ML, Kim W, Gingery M, Tran HH, Robinson MA, Faham S, Bowie JU (2001) Polymerization of the SAM domain of TEL in leukemogenesis and transcriptional repression. EMBO J 20:4173-4182. (Pubitemid 32751833)
4. Baron MK, Boeckers TM, Vaida B, Faham S, Gingery M, Sawaya MR, Salyer D, Gundelfinger ED, Bowie JU (2006) An architectural framework that may lie at the core of the postsynaptic density. Science 311:531-535.
5. Qiao F, Song H, Kim CA, Sawaya MR, Hunter JB, Gingery M, Rebay I, Courey AJ, Bowie JU (2004) Derepression by depolymerization; structural insights into the regulation of Yan by Mae. Cell 118:163-173. (Pubitemid 38962573)
6. Kim CA, Sawaya MR, Cascio D, Kim W, Bowie JU (2005) Structural organization of a Sex-comb-on-midleg/polyhomeotic copolymer. J Biol Chem 280: 27769-27775. (Pubitemid 41076891)
7. Harada BT, Knight MJ, Imai S, Qiao F, Ramachander R, Sawaya MR, Gingery M, Sakane F, Bowie JU (2008) Regulation of enzyme localization by polymerization: polymer formation by the SAM domain of diacylglycerol kinase delta1. Structure 16:380-387. (Pubitemid 351324112)
8. Baron MK, Boeckers TM, Vaida B, Faham S, Gingery M, Sawaya MR, Salyer D, Gundelfinger ED, Bowie JU (2006) An architectural framework that may lie at the core of the postsynaptic density. Science 311:531-535.
9. Douziech M, Sahmi M, Laberge G, Therrien M (2006) A KSR/CNK complex mediated by HYP, a novel SAM domain-containing protein, regulates RAS-dependent RAF activation in Drosophila. Genes Dev 20:807-819.
10. Leone M, Cellitti J, Pellecchia M (2008) NMR studies of a heterotypic Sam-Sam domain association: the interaction between the lipid phosphatase Ship2 and the EphA2 receptor. Biochemistry 47:12721-12728.
11. Rajakulendran T, Sahmi M, Kurinov I, Tyers M, Therrien M, Sicheri F (2008) CNK and HYP form a discrete dimer by their SAM domains to mediate RAF kinase signaling. Proc Natl Acad Sci USA 105:2836-2841. (Pubitemid 351723630)
12. Ramachander R, Kim CA, Phillips ML, Mackereth CD, Thanos CD, McIntosh LP, Bowie JU (2002) Oligomerization- dependent association of the SAM domains from Schizosaccharomyces pombe Byr2 and Ste4. J Biol Chem 277:39585-39593. (Pubitemid 35190938)
13. Qiao F, Harada B, Song H, Whitelegge J, Courey AJ, Bowie JU (2006) Mae inhibits pointed-P2 transcriptional activity by blocking its MAPK docking site. EMBO J 25:70-79. (Pubitemid 43077296)
14. Johnson PE, Donaldson LW (2006) RNA recognition by the Vts1p SAM domain. Nat Struct Mol Biol 13: 177-178. (Pubitemid 43214722)
15. Bhunia A, Domadia PN, Mohanram H, Bhattacharjya S (2009) NMR structural studies of the Ste11 SAM domain in the dodecyl phosphocholine micelle. Proteins 74:328-343.
16. De Rycker M, Venkatesan RN, Wei C, Price CM (2003) Vertebrate tankyrase domain structure and sterile alpha motif (SAM)-mediated multimerization. Biochem J 372:87-96. (Pubitemid 36609609)
17. Smalla M, Schmieder P, Kelly M, Ter Laak A, Krause G, Ball L, Wahl M, Bork P, Oschkinat H (1999) Solution structure of the receptor tyrosine kinase EphB2 SAM domain and identification of two distinct homotypic interaction sites. Protein Sci 8: 1954-1961. (Pubitemid 29489922)
18. Thanos CD, Goodwill KE, Bowie JU (1999) Oligomeric structure of the human EphB2 receptor SAM domain. Science 283:833-836.
19. Meruelo AD, Bowie JU (2009) Identifying polymer-forming SAM domains. Proteins 74:1-5.
20. Lawrence MS, Phillips KJ, Liu DR (2007) Supercharging proteins can impart unusual resilience. J Am Chem Soc 129:10110-10112. (Pubitemid 47312950)
21. Tran HH, Kim CA, Faham S, Siddall M, Bowie JU (YEAR) Native interface of the SAM domain polymer of TEL. BMC Struct Biol 2:5-5.
22. Letunic I, Doerks T, Bork P (2009) SMART 6: recent updates and new developments. Nucleic Acids Res 37: D229-D232.
23. Schultz J, Milpetz F, Bork P, Ponting CP (1998) SMART, a simple modular architecture research tool: identification of signaling domains. Proc Natl Acad Sci USA 95:5857-5864. (Pubitemid 28248931)
24. De Rycker M, Price CM (2004) Tankyrase polymerization is controlled by its sterile alpha motif and poly (ADP-ribose) polymerase domains. Mol Cell Biol 24: 9802-9812. (Pubitemid 39458808)
25. Nelson ML, Kang H, Lee GM, Blaszczak AG, Lau DKW, McIntosh LP, Graves BJ (2010) Ras signaling requires dynamic properties of Ets1 for phosphorylation- enhanced binding to coactivator CBP. Proc Natl Acad Sci USA 107:10026-10031.
26. Lees AM, Deconinck AE, Campbell BD, Lees RS (2005) Atherin: a newly identified, lesion-specific, LDL-binding protein in human atherosclerosis. Atherosclerosis 182:219-230. (Pubitemid 41267189)
27. Cogswell C, Price SJ, Hou X, Guay-Woodford LM, Flaherty L, Bryda EC (2003) Positional cloning of jcpk/bpk locus of the mouse. Mamm Genome 14:242-249. (Pubitemid 36408151)
28. Maisonneuve C, Guilleret I, Vick P, Weber T, Andre P, Beyer T, Blum M, Constam DB (2009) Bicaudal C, a novel regulator of Dvl signaling abutting RNA-processing bodies, controls cilia orientation and leftward flow. Development 136:3019-3030.
29. Stagner EE, Bouvrette DJ, Cheng J, Bryda EC (2009) The polycystic kidney disease-related proteins Bicc1 and SamCystin interact. Biochem Biophys Res Commun 383:16-21.
30. Roos J, DiGregorio PJ, Yeromin AV, Ohlsen K, Lioudyno M, Zhang S, Safrina O, Kozak JA, Wagner SL, Cahalan MD, Veliçelebi G, Stauderman KA (2005) STIM1, an essential and conserved component of store-operated Ca2+ channel function. J Cell Biol 169:435-445. (Pubitemid 40686694)
31. Liou J, Kim ML, Heo WD, Jones JT, Myers JW, Ferrell JE, Meyer T (2005) STIM is a Ca2+ sensor essential for Ca2+-store-depletion-triggered Ca2+ influx. Curr Biol 15:1235-1241. (Pubitemid 40950523)
32. Johnstone LS, Graham SJL, Dziadek MA (2010) STIM proteins: integrators of signalling pathways in development, differentiation and disease. J Cell Mol Med 14: 1890-1903.
33. Williams RT, Manji SS, Parker NJ, Hancock MS, van Stekelenburg L, Eid JP, Senior PV, Kazenwadel JS, Shandala T, Saint R, Smith PJ, Dziadek MA (2001) Identification and characterization of the STIM (stromal interaction molecule) gene family: coding for a novel class of transmembrane proteins. Biochem J 357: 673-685. (Pubitemid 32735148)
34. Liou J, Fivaz M, Inoue T, Meyer T (2007) Live-cell imaging reveals sequential oligomerization and local plasma membrane targeting of stromal interaction molecule 1 after Ca2+ store depletion. Proc Natl Acad Sci USA 104:9301-9306. (Pubitemid 47185774)
35. Stathopulos PB, Zheng L, Ikura M (2009) Stromal interaction molecule (STIM) 1 and STIM2 calciumsensing regions exhibit distinct unfolding and oligomerization kinetics. J Biol Chem 284:728-732.
36. Luik RM, Wu MM, Buchanan J, Lewis RS (2006) The elementary unit of store-operated Ca2+ entry: local activation of CRAC channels by STIM1 at ER-plasma membrane junctions. J Cell Biol 174: 815-825. (Pubitemid 44373731)
37. Stathopulos PB, Zheng L, Li G, Plevin MJ, Ikura M (2008) Structural and mechanistic insights into STIM1-mediated initiation of store-operated calcium entry. Cell 135:110-122.
38. Stathopulos PB, Li G, Plevin MJ, Ames JB, Ikura M (2006) Stored Ca2+ depletion-induced oligomerization of stromal interaction molecule 1 (STIM1) via the EFSAM region. J Biol Chem 281:35855-35862.
39. Schatz PJ, Cull MG, Martin EL, Gates CM (1996) Screening of peptide libraries linked to lac repressor. Meth Enzymol 267:171-191. (Pubitemid 26159222)