A fasciclin-like Arabinogalactan-protein (FLA) mutant of Arabidopsis thaliana, fla1, shows defects in shoot regeneration

PLoS ONE

Volumn 6, Issue 9, 2011, Pages

  Johnson, Kim L ^a,c   Kibble, Natalie A J ^b   Bacic, Antony ^a   Schultz, Carolyn J ^b  

^a UNIVERSITY OF MELBOURNE   (Australia)

^b UNIVERSITY OF ADELAIDE   (Australia)

^c JOHN INNES CENTRE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

FASCICLIN LIKE ARABINOGALACTAN PROTEIN; UNCLASSIFIED DRUG; VEGETABLE PROTEIN; ARABIDOPSIS PROTEIN; ARABINOGALACTAN PROTEINS; MUCOPROTEIN;

ARABIDOPSIS; ARTICLE; CELL EXPANSION; CELL SURFACE; CONTROLLED STUDY; FLA1 GENE; GENE EXPRESSION; GENE INSERTION; GENE MUTATION; HOMOZYGOSITY; HYDROPHOBICITY; MICROSPORE; NONHUMAN; PHENOTYPE; PLANT GENE; PLANT STOMA; PROTEIN DOMAIN; PROTEIN FUNCTION; ROOT DEVELOPMENT; SHOOT REGENERATION; TRANSGENE; GENETICS; METABOLISM; MICROSCOPY; PHYSIOLOGY; PLANT;

ARABIDOPSIS; ARABIDOPSIS THALIANA;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; MICROSCOPY; MUCOPROTEINS; PLANT PROTEINS; PLANT SHOOTS;

EID: 80053087604     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0025154     Document Type: Article

References (59)

1. Majewski-Sawka A, Nothnagel EA, (2000) The multiple roles of arabinogalactan proteins in plant development. Plant Physiol 122: 3-9.
2. Ellis M, Egelund J, Schultz CJ, Bacic A, (2010) Arabinogalactan-proteins: key regulators at the cell surface? Plant Physiol 153: 403-419.
3. Seifert GJ, Roberts K, (2007) The biology of arabinogalactan proteins. Ann Rev Plant Biol 58: 137-161.
4. Motose H, Sugiyama M, Fukuda H, (2004) A proteoglycan mediates inductive interaction during plant vascular development. Nature 429: 873-878.
5. Johnson KL, Jones BJ, Bacic A, Schultz CJ, (2003) The fasciclin-like arabinogalactan proteins of Arabidopsis. A multigene family of putative cell adhesion molecules. Plant Physiol 133: 1911-1925.
6. MacMillan CP, Mansfield SD, Stachurski ZH, Evans R, Southerton SG, (2010) Fasciclin-like arabinogalactan proteins: specialization for stem biomechanics and cell wall architecture in Arabidopsis and Eucalyptus. Plant J 62: 689-703.
7. Gaspar YM, Johnson KL, McKenna JA, Bacic A, Schultz CJ, (2001) The complex structures of arabinogalactan-proteins and the journey towards understanding function. Plant Mol Biol 47: 161-176.
8. Schultz CJ, Johnson KL, Currie G, Bacic A, (2000) The classical arabinogalactan protein gene family of Arabidopsis. Plant Cell 12: 1751-1767.
9. Shi H, Kim Y, Guo Y, Stevenson B, Zhu J-K, (2003) The Arabidopsis SOS5 locus encodes a putative cell surface adhesion protein and is required for normal cell expansion. Plant Cell 15: 19-32.
10. Elkins T, Hortsch M, Bieber AJ, Snow PM, Goodman CS, (1990) Drosophila fasciclin 1 is a novel homophilic adhesion molecule that along with fasciclin III can mediate cell sorting. J Cell Biol 110: 1825-1832.
11. Huber O, Sumper M, (1994) Algal-CAMs: isoforms of a cell adhesion molecule in embryos of the alga Volvox with homology to Drosophila fasciclin I. EMBO J 13: 4212-4222.
12. van Vactor D, (1998) Adhesion and signaling in axonal fasciculation. Curr Opin Neurobiol 8: 80-86.
13. Liu TB, Chen GQ, Min H, Lin FC, (2009) MoFLP1, encoding a novel fungal fasciclin-like protein, is involved in conidiation and pathogenicity in Magnaporthe oryzae. J Zhejiang Univ-Sci B 10: 434-444.
14. Harwood A, Coates JC, (2004) A prehistory of cell adhesion. Curr Opin Cell Biol 16: 470-476.
15. Eisenhaber B, Wildpaner M, Schultz CJ, Borner GHH, Dupree P, et al. (2003) Glycosylphosphatidylinositol lipid anchoring of plant proteins. Sensitive prediction from sequence- and genome-wide studies for Arabidopsis and rice. Plant Physiol 133: 1691-1701.
16. Borner GHH, Sherrier DJ, Weimar T, Michaelson LV, Hawkins ND, et al. (2005) Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipids rafts. Plant Physiol 137: 104-116.
17. Lalanne E, Honys D, Johnson A, Borner GHH, Lilley KS, et al. (2004) SETH1 and SETH2, two components of the glycosylphosphatidylinositol anchor biosynthetic pathway, are required for pollen germination and tube growth in Arabidopsis. Plant Cell 16: 229-240.
18. Schultz CJ, Rumsewicz MP, Johnson KL, Jones BJ, Gaspar YM, et al. (2002) Using genomic resources to guide research directions. The arabinogalactan protein gene family as a test case. Plant Physiol 129: 1448-1463.
19. Bouché N, Bouchez D, (2001) Arabidopsis gene knockout: phenotypes wanted. Curr Opin Plant Biol 4: 111-117.
20. Meissner RC, Jin H, Cominelli E, Denekamp M, Fuertes A, et al. (1999) Function search in a large transcription factor gene family in Arabidopsis: assessing the potential of reverse genetics to identify insertional mutations in R2R3 MYB genes. Plant Cell 11: 1827-1840.
21. Winkler RG, Frank MR, Galbraith DW, Feyereisen R, Feldmann KA, (1998) Systematic reverse genetics of transfer-DNA-tagged lines of Arabidopsis. Plant Physiol 118: 743-750.
22. Gaspar YM, Nam J, Schultz CJ, Lee LY, Gilson PR, et al. (2004) Characterisation of the Arabidopsis lysine-rich arabinogalactan-protein AtAGP17 mutant (rat1) that results in a decreased efficiency of Agrobacterium transformation. Plant Physiol 135: 2162-2167.
23. Nam J, Mysore KS, Zheng C, Knue MK, Matthysse AG, et al. (1999) Identification of T-DNA tagged Arabidopsis mutants that are resistant to transformation by Agrobacterium. Mol Gen Genet 261: 429-438.
24. van Hengel AJ, Roberts K, (2003) AtAGP30, an arabinogalactan-protein in the cell walls of the primary root, plays a role in root regeneration and seed germination. Plant J 36: 256-270.
25. Li J, Yu MA, Geng LL, Zhao J, (2010) The fasciclin-like arabinogalactan protein gene, FLA3, is involved in microspore development of Arabidopsis. Plant J 64: 482-497.
26. Valvekens D, Van Montague M, Lijsebettens MV, (1988) Agrobacterium tumefaciens-mediated transformation of Arabidopsis thaliana root explants by using kanamycin selection. Proc Natl Acad Sci U S A 85: 5536-5540.
27. Cary AJ, Che P, Howell SH, (2002) Developmental events and shoot apical meristem gene expression patterns during shoot development in Arabidopsis thaliana. Plant J 32: 867-877.
28. Che P, Gingerich DJ, Lall S, Howell SH, (2002) Global and hormone-induced gene expression changes during shoot development in Arabidopsis. Plant Cell 14: 2771-2785.
29. Atta R, Laurens L, Boucheron-Dubuisson E, Guivarc'h A, Carnero E, et al. (2009) Pluripotency of Arabidopsis xylem pericycle underlies shoot regeneration from root and hypocotyl explants grown in vitro. Plant J 57: 626-644.
30. Sugimoto K, Jiao YL, Meyerowitz EM, (2010) Arabidopsis regeneration from multiple tissues occurs via a root development pathway. Dev Cell 18: 463-471.
31. McKinney EC, Ali N, Traut A, Feldmann KA, Belostotsky DA, et al. (1995) Sequence-based identification of T-DNA insertion mutations in Arabidopsis: actin mutants act2-1 and act4-1. Plant J 8: 613-622.
32. Boyes DC, Zayed AM, Ascenzi R, McCaskill AJ, Hoffman NE, et al. (2001) Growth stage-based phenotypic analysis of Arabidopsis: a model for high throughput functional genomics in plants. Plant Cell 13: 1499-1510.
33. Smyth DR, Bowman JL, Meyerowitz EM, (1990) Early flower development in Arabidopsis. Plant Cell 2: 755-767.
34. Cary A, Uttamchandani SJ, Smets R, Van Onckelen HA, Howell SH, (2001) Arabidopsis mutants with increased organ regeneration in tissue culture are more competent to respond to hormonal signals. Planta 213: 700-707.
35. Alonso JM, Stepanova AN, Leisse TJ, Kim CJ, Chen HM, et al. (2003) Genome-wide insertional mutagenesis of Arabidopsis thaliana. Science 301: 653-657.
36. Candela M, Velázquez I, De la Cruz R, Sendino AM, De la Peña A, (2001) Differences in in vitro plant regeneration ability among four Arabidopsis thaliana ecotypes. In Vitro Cell Dev Biol-Plant 37: 638-643.
37. Che P, Lall S, Howell SH, (2007) Developmental steps in acquiring competence for shoot development in Arabidopsis tissue culture. Planta 226: 1183-1194.
38. Péret B, De Rybel B, Casimiro I, Benková E, Swarup R, et al. (2009) Arabidopsis lateral root development: an emerging story. Trends Plant Sci 14: 399-408.
39. Buechel S, Leibfried A, To JPC, Zhao Z, Andersen SU, et al. (2010) Role of A-type ARABIDOPSIS RESPONSE REGULATORS in meristem maintenance and regeneration. Eur J Cell Biol 89: 279-284.
40. Kiba T, Yamada H, Sato S, Kato T, Tabata S, et al. (2003) The type-A response regulator, ARR15, acts as a negative regulator in the cytokinin-mediated signal transduction in Arabidopsis thaliana. Plant Cell Physiol 44: 868-874.
41. Matsuo N, Makino M, Banno H, (2011) Arabidopsis ENHANCER OF SHOOT REGENERATION (ESR)1 and ESR2 regulate in vitro shoot regeneration and their expressions are differentially regulated. Plant Sci 181: 39-46.
42. Iwase A, Mitsuda N, Koyama T, Hiratsu K, Kojima M, et al. (2011) The AP2/ERF transcription factor WIND1 controls cell dedifferentiation in Arabidopsis. Curr Biol 21: 508-514.
43. Benkova E, Michniewicz M, Sauer M, Teichmann T, Seifertova D, et al. (2003) Local, efflux-dependent auxin gradients as a common module for plant organ formation. Cell 115: 591-602.
44. Casimiro I, Beeckman T, Graham N, Bhalerao R, Zhang H, et al. (2003) Dissecting Arabidopsis lateral root development. Trends Plant Sci 8: 165-171.
45. Casero PJ, Casimiro I, Knox JP, (1998) Occurrence of cell surface arabinogalactan-protein and extensin epitopes in relation to pericycle and vascular tissue development in the root apex of four species. Planta 204: 252-259.
46. Knox JP, (1995) The extracellular matrix in higher plants: developmentally regulated proteoglycans and glycoproteins of the plant cell surface. FASEB J 9: 1004-1012.
47. Pennell RI, Cronk QCB, Forsberg S, Stohr C, Snogerup L, et al. (1995) Cell-context signalling. Philos Trans R Soc Lond Ser B-Biol Sci 350: 87-93.
48. Pennell RI, Janniche L, Kjellbom P, Scofield GN, Peart JM, et al. (1991) Developmental regulation of a plasma membrane arabinogalactan protein epitope in oilseed rape flowers. Plant Cell 3: 1317-1326.
49. Serpe MD, Nothnagel EA, (1999) Arabinogalactan-proteins in the multiple domains of the plant cell surface. Adv Bot Res 30: 207-289.
50. Showalter AM, (2001) Arabinogalactan-proteins: structure, expression and function. Cell Mol Life Sci 58: 1399-1417.
51. McCabe PF, Valentine TA, Forsberg LS, Pennell RI, (1997) Soluble signals from cells identified at the cell wall establish a developmental pathway in carrot. Plant Cell 9: 2225-2241.
52. Fischer U, Men S, Grebe M, (2004) Lipid function in plant cell polarity. Curr Opin Plant Biol 7: 670-676.
53. Feraru E, Feraru MI, Kleine-Vehn J, Martinière A, Mouille G, et al. (2011) PIN polarity maintenance by the cell wall in Arabidopsis. Curr Biol 21: 338-343.
54. Clout NJ, Tisi D, Hohenester E, (2003) Novel fold revealed by the structure of a FAS1 domain pair from the insect cell adhesion molecule Fasciclin 1. Structure 11: 197-203.
55. Gens JS, Fujiki M, Pickard BG, (2000) Arabinogalactan protein and wall-associated kinase in a plasmalemmal reticulum with specialized verticles. Protoplasma 212: 115-134.
56. Pickard BG, Fujiki M, (2005) Ca2+ pulsation in BY-2 cells and evidence for control of mechanosensory Ca2+-selective channels by the plasmalemmal reticulum. Funct Plant Biol 32: 863-879.
57. Clough SJ, Bent AF, (1998) Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J 16: 735-743.
58. Jefferson RA, (1989) The GUS reporter gene system. Nature 342: 837-838.
59. Schultz CJ, Hauser K, Lind JL, Atkinson AH, Pu Z-Y, et al. (1997) Molecular characterisation of a cDNA sequence encoding the backbone of a style-specific 120kDa glycoprotein which has features of both extensins and arabinogalactan-proteins. Plant Mol Biol 35: 833-845.