메뉴 건너뛰기




Volumn 12, Issue , 2011, Pages

Tissue-specific gene expression templates for accurate molecular characterization of the normal physiological states of multiple human tissues with implication in development and cancer studies

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY; ARTICLE; CANCER CELL CULTURE; CANCER RESEARCH; CANCER TISSUE; CARCINOGENESIS; CONTROLLED STUDY; DEVELOPMENTAL STAGE; DNA TEMPLATE; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENE EXPRESSION TEMPLATE; GENE FUNCTION; HISTOPATHOLOGY; HUMAN; HUMAN TISSUE; MELANOMA; MICROARRAY ANALYSIS; MOLECULAR GENETICS; MOLECULAR INTERACTION; MOLECULAR MODEL; NUCLEOTIDE SEQUENCE; PHYSIOLOGY; PREDICTION; SENSITIVITY AND SPECIFICITY; SKIN TUMOR; STOICHIOMETRY; TISSUE DIFFERENTIATION; TISSUE SPECIFICITY; TISSUE STRUCTURE; TISSUE TYPES; TRANSCRIPTOMICS; VALIDATION PROCESS; ANTIBODY SPECIFICITY; CELL LINE; CLUSTER ANALYSIS; DNA MICROARRAY; GENE REGULATORY NETWORK; GENETIC DATABASE; GENETICS; HUMAN GENOME; METABOLISM; METHODOLOGY; NEOPLASM; SKIN;

EID: 80052165626     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-12-439     Document Type: Article
Times cited : (16)

References (38)
  • 1
    • 58149189856 scopus 로고    scopus 로고
    • McKusick's Online Mendelian Inheritance in Man (OMIM®)
    • 2686440, 18842627
    • Amberger J, Bocchini CA, Scott AF, Hamosh A. McKusick's Online Mendelian Inheritance in Man (OMIM®). Nucleic Acids Res 2009, 37(suppl 1):D793-D796. 2686440, 18842627.
    • (2009) Nucleic Acids Res , vol.37 , Issue.SUPPL. 1
    • Amberger, J.1    Bocchini, C.A.2    Scott, A.F.3    Hamosh, A.4
  • 2
    • 77951702343 scopus 로고    scopus 로고
    • Genetic Heterogeneity in Human Disease
    • 10.1016/j.cell.2010.03.032, 20403315
    • McClellan J, King M-C. Genetic Heterogeneity in Human Disease. Cell 2010, 141(2):210-217. 10.1016/j.cell.2010.03.032, 20403315.
    • (2010) Cell , vol.141 , Issue.2 , pp. 210-217
    • McClellan, J.1    King, M.-C.2
  • 3
    • 79953283356 scopus 로고    scopus 로고
    • Genetic Interactions in Cancer Progression and Treatment
    • 10.1016/j.cell.2011.03.020, 21458666
    • Ashworth A, Lord Christopher J, Reis-Filho Jorge S. Genetic Interactions in Cancer Progression and Treatment. Cell 2011, 145(1):30-38. 10.1016/j.cell.2011.03.020, 21458666.
    • (2011) Cell , vol.145 , Issue.1 , pp. 30-38
    • Ashworth, A.1    Lord Christopher, J.2    Reis-Filho Jorge, S.3
  • 4
    • 21444445235 scopus 로고    scopus 로고
    • Interpreting expression profiles of cancers by genome-wide survey of breadth of expression in normal tissues
    • 10.1016/j.ygeno.2005.04.008, 15950434
    • Ge X, Yamamoto S, Tsutsumi S, Midorikawa Y, Ihara S, Wang SM, H A. Interpreting expression profiles of cancers by genome-wide survey of breadth of expression in normal tissues. Genomics 2005, 86(2):127-141. 10.1016/j.ygeno.2005.04.008, 15950434.
    • (2005) Genomics , vol.86 , Issue.2 , pp. 127-141
    • Ge, X.1    Yamamoto, S.2    Tsutsumi, S.3    Midorikawa, Y.4    Ihara, S.5    Wang, S.M.6    H, A.7
  • 9
    • 1542475298 scopus 로고    scopus 로고
    • In silico analysis indicates a similar gene expression pattern between human brain and testis
    • 10.1159/000076290, 15004465
    • Guo J, Zhu P, Wu C, Yu L, Zhao S, Gu X. In silico analysis indicates a similar gene expression pattern between human brain and testis. Cytogenetic and Genome Research 2003, 103(1-2):58-62. 10.1159/000076290, 15004465.
    • (2003) Cytogenetic and Genome Research , vol.103 , Issue.1-2 , pp. 58-62
    • Guo, J.1    Zhu, P.2    Wu, C.3    Yu, L.4    Zhao, S.5    Gu, X.6
  • 10
    • 48249100925 scopus 로고    scopus 로고
    • A Precisely Regulated Gene Expression Cassette Potently Modulates Metastasis and Survival in Multiple Solid Cancers
    • 10.1371/journal.pgen.1000129, 2444049, 18636107
    • Yu K, Ganesan K, Tan LK, Laban M, Wu J, Zhao XD, Li H, Leung CHW, Zhu Y, Wei CL, et al. A Precisely Regulated Gene Expression Cassette Potently Modulates Metastasis and Survival in Multiple Solid Cancers. PLoS Genet 2008, 4(7):e1000129. 10.1371/journal.pgen.1000129, 2444049, 18636107.
    • (2008) PLoS Genet , vol.4 , Issue.7
    • Yu, K.1    Ganesan, K.2    Tan, L.K.3    Laban, M.4    Wu, J.5    Zhao, X.D.6    Li, H.7    Leung, C.H.W.8    Zhu, Y.9    Wei, C.L.10
  • 12
    • 0033618337 scopus 로고    scopus 로고
    • Matrix Metalloproteinases
    • 10.1074/jbc.274.31.21491, 10419448
    • Nagase H, Woessner JF. Matrix Metalloproteinases. Journal of Biological Chemistry 1999, 274(31):21491-21494. 10.1074/jbc.274.31.21491, 10419448.
    • (1999) Journal of Biological Chemistry , vol.274 , Issue.31 , pp. 21491-21494
    • Nagase, H.1    Woessner, J.F.2
  • 13
    • 0038806439 scopus 로고    scopus 로고
    • How Proteases Regulate Bone Morphogenesis
    • 10.1111/j.1749-6632.2003.tb03214.x, 12814943
    • Ortega N, Behonick D, Stickens D, Werb Z. How Proteases Regulate Bone Morphogenesis. Annals of the New York Academy of Sciences 2003, 995(1):109-116. 10.1111/j.1749-6632.2003.tb03214.x, 12814943.
    • (2003) Annals of the New York Academy of Sciences , vol.995 , Issue.1 , pp. 109-116
    • Ortega, N.1    Behonick, D.2    Stickens, D.3    Werb, Z.4
  • 14
    • 0037138370 scopus 로고    scopus 로고
    • Signaling through the JAK/STAT pathway, recent advances and future challenges
    • 10.1016/S0378-1119(02)00398-0, 12039028
    • Kisseleva T, Bhattacharya S, Braunstein J, Schindler CW. Signaling through the JAK/STAT pathway, recent advances and future challenges. Gene 2002, 285(1-2):1-24. 10.1016/S0378-1119(02)00398-0, 12039028.
    • (2002) Gene , vol.285 , Issue.1-2 , pp. 1-24
    • Kisseleva, T.1    Bhattacharya, S.2    Braunstein, J.3    Schindler, C.W.4
  • 15
    • 69149107602 scopus 로고    scopus 로고
    • Regulation of hematopoietic cell development and function by Stat3
    • 10.2741/3597, 19482615
    • Hankey PA. Regulation of hematopoietic cell development and function by Stat3. Front Biosci 2009, 14:5273-5290. 10.2741/3597, 19482615.
    • (2009) Front Biosci , vol.14 , pp. 5273-5290
    • Hankey, P.A.1
  • 16
    • 21444432424 scopus 로고    scopus 로고
    • Animal Embryonic Stem (ES) Cells: Self-renewal, Pluripotency, Transgenesis and Nuclear Transfer
    • Satto S, Liu B, Yokoyama K. Animal Embryonic Stem (ES) Cells: Self-renewal, Pluripotency, Transgenesis and Nuclear Transfer. Human Cell 2004, 17(3):107-116.
    • (2004) Human Cell , vol.17 , Issue.3 , pp. 107-116
    • Satto, S.1    Liu, B.2    Yokoyama, K.3
  • 17
    • 73349110430 scopus 로고    scopus 로고
    • Wnt and PPAR[gamma] signaling in osteoblastogenesis and adipogenesis
    • 10.1038/nrrheum.2009.137, 19581903
    • Takada I, Kouzmenko AP, Kato S. Wnt and PPAR[gamma] signaling in osteoblastogenesis and adipogenesis. Nat Rev Rheumatol 2009, 5(8):442-447. 10.1038/nrrheum.2009.137, 19581903.
    • (2009) Nat Rev Rheumatol , vol.5 , Issue.8 , pp. 442-447
    • Takada, I.1    Kouzmenko, A.P.2    Kato, S.3
  • 18
    • 58149401447 scopus 로고    scopus 로고
    • Emerging Roles of Peroxisome Proliferator-Activated Receptors (PPARs) in the Regulation of Neural Stem Cells Proliferation and Differentiation
    • 10.1007/s12015-008-9024-2, 18561036
    • Cimini A, Cerù M. Emerging Roles of Peroxisome Proliferator-Activated Receptors (PPARs) in the Regulation of Neural Stem Cells Proliferation and Differentiation. Stem Cell Reviews and Reports 2008, 4(4):293-303. 10.1007/s12015-008-9024-2, 18561036.
    • (2008) Stem Cell Reviews and Reports , vol.4 , Issue.4 , pp. 293-303
    • Cimini, A.1    Cerù, M.2
  • 21
    • 70349860264 scopus 로고    scopus 로고
    • Growth factor receptor expression in anal squamous lesions: modifications associated with oncogenic human papillomavirus and human immunodeficiency virus
    • 10.1016/j.humpath.2009.05.010, 19716155
    • Walker F, Abramowitz L, Benabderrahmane D, Duval X, Descatoire V, Hénin D, Lehy T, Aparicio T. Growth factor receptor expression in anal squamous lesions: modifications associated with oncogenic human papillomavirus and human immunodeficiency virus. Human pathology 2009, 40(11):1517-1527. 10.1016/j.humpath.2009.05.010, 19716155.
    • (2009) Human pathology , vol.40 , Issue.11 , pp. 1517-1527
    • Walker, F.1    Abramowitz, L.2    Benabderrahmane, D.3    Duval, X.4    Descatoire, V.5    Hénin, D.6    Lehy, T.7    Aparicio, T.8
  • 22
    • 0034947649 scopus 로고    scopus 로고
    • EGF mutant receptor vIII as a molecular target in cancer therapy
    • 10.1677/erc.0.0080083, 11397666
    • Kuan C, Wikstrand C, Bigner D. EGF mutant receptor vIII as a molecular target in cancer therapy. Endocr Relat Cancer 2001, 8(2):83-96. 10.1677/erc.0.0080083, 11397666.
    • (2001) Endocr Relat Cancer , vol.8 , Issue.2 , pp. 83-96
    • Kuan, C.1    Wikstrand, C.2    Bigner, D.3
  • 23
    • 34247609280 scopus 로고    scopus 로고
    • Identification and Characterization of Small-Molecule Inducers of Epidermal Keratinocyte Differentiation
    • 10.1021/cb600435t, 17348628
    • Hong J, Lee J, Min KH, Walker JR, Peters EC, Gray NS, Cho CY, Schultz PG. Identification and Characterization of Small-Molecule Inducers of Epidermal Keratinocyte Differentiation. ACS Chemical Biology 2007, 2(3):171-175. 10.1021/cb600435t, 17348628.
    • (2007) ACS Chemical Biology , vol.2 , Issue.3 , pp. 171-175
    • Hong, J.1    Lee, J.2    Min, K.H.3    Walker, J.R.4    Peters, E.C.5    Gray, N.S.6    Cho, C.Y.7    Schultz, P.G.8
  • 26
    • 27144537768 scopus 로고    scopus 로고
    • Novel genes associated with malignant melanoma but not benign melanocytic lesions
    • 10.1158/1078-0432.CCR-05-0683, 16243793
    • Talantov D, Mazumder A, Yu JX, Briggs T, Jiang Y, Backus J, Atkins D, Y W. Novel genes associated with malignant melanoma but not benign melanocytic lesions. Clinical Cancer Research 2005, 11(20):7234-7242. 10.1158/1078-0432.CCR-05-0683, 16243793.
    • (2005) Clinical Cancer Research , vol.11 , Issue.20 , pp. 7234-7242
    • Talantov, D.1    Mazumder, A.2    Yu, J.X.3    Briggs, T.4    Jiang, Y.5    Backus, J.6    Atkins, D.7    Y, W.8
  • 27
    • 33644817235 scopus 로고    scopus 로고
    • Microarray Analysis of Gene Expression in Cultured Skin Substitutes Compared with Native Human Skin
    • 10.1111/j.0022-202X.2005.23971.x, 16354201
    • Smiley AK, Klingenberg JM, Aronow BJ, Boyce ST, Kitzmiller W, Supp DM. Microarray Analysis of Gene Expression in Cultured Skin Substitutes Compared with Native Human Skin. J Investig Dermatol 2005, 125(6):1286-1301. 10.1111/j.0022-202X.2005.23971.x, 16354201.
    • (2005) J Investig Dermatol , vol.125 , Issue.6 , pp. 1286-1301
    • Smiley, A.K.1    Klingenberg, J.M.2    Aronow, B.J.3    Boyce, S.T.4    Kitzmiller, W.5    Supp, D.M.6
  • 28
    • 77950356812 scopus 로고    scopus 로고
    • Advances in metaheuristics for gene selection and classification of microarray data
    • 10.1093/bib/bbp035, 19789265
    • Duval B, Hao J-K. Advances in metaheuristics for gene selection and classification of microarray data. Briefings in Bioinformatics 2010, 11(1):127-141. 10.1093/bib/bbp035, 19789265.
    • (2010) Briefings in Bioinformatics , vol.11 , Issue.1 , pp. 127-141
    • Duval, B.1    Hao, J.-K.2
  • 29
    • 0025312728 scopus 로고
    • A genetic model for colorectal tumorigenesis
    • 10.1016/0092-8674(90)90186-I, 2188735
    • Fearon ER, Vogelstein B. A genetic model for colorectal tumorigenesis. Cell 1990, 61(5):759-767. 10.1016/0092-8674(90)90186-I, 2188735.
    • (1990) Cell , vol.61 , Issue.5 , pp. 759-767
    • Fearon, E.R.1    Vogelstein, B.2
  • 30
    • 0034614637 scopus 로고    scopus 로고
    • The Hallmarks of Cancer
    • 10.1016/S0092-8674(00)81683-9, 10647931
    • Hanahan D, Weinberg RA. The Hallmarks of Cancer. Cell 2000, 100(1):57-70. 10.1016/S0092-8674(00)81683-9, 10647931.
    • (2000) Cell , vol.100 , Issue.1 , pp. 57-70
    • Hanahan, D.1    Weinberg, R.A.2
  • 31
    • 23444456437 scopus 로고    scopus 로고
    • Effects of RNA degradation on gene expression analysis of human postmortem tissues
    • Lee J, Hever A, Willhite D, Zlotnik A, Hevezi P. Effects of RNA degradation on gene expression analysis of human postmortem tissues. FASEB J 2005, 04-3552fje.
    • (2005) FASEB J
    • Lee, J.1    Hever, A.2    Willhite, D.3    Zlotnik, A.4    Hevezi, P.5
  • 34
    • 33846067524 scopus 로고    scopus 로고
    • PANTHER version 6: protein sequence and function evolution data with expanded representation of biological pathways
    • 1716723, 17130144
    • Mi H, Guo N, Kejariwal A, Thomas PD. PANTHER version 6: protein sequence and function evolution data with expanded representation of biological pathways. Nucl Acids Res 2007, 35(suppl_1):D247-252. 1716723, 17130144.
    • (2007) Nucl Acids Res , vol.35 , Issue.SUPPL. 1
    • Mi, H.1    Guo, N.2    Kejariwal, A.3    Thomas, P.D.4
  • 36
    • 0142121516 scopus 로고    scopus 로고
    • Exploration, Normalization, and Summaries of High Density Oligonucleotide Array Probe Level Data
    • 10.1093/biostatistics/4.2.249, 12925520
    • Irizarry R, Hobbs B, Collin F, Beazer-Barclay YD, Antonellis KJ, Scherf U, Speed TP. Exploration, Normalization, and Summaries of High Density Oligonucleotide Array Probe Level Data. Biostatistics 2003, 4(2):249-264. 10.1093/biostatistics/4.2.249, 12925520.
    • (2003) Biostatistics , vol.4 , Issue.2 , pp. 249-264
    • Irizarry, R.1    Hobbs, B.2    Collin, F.3    Beazer-Barclay, Y.D.4    Antonellis, K.J.5    Scherf, U.6    Speed, T.P.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.