-
1
-
-
0028806048
-
Quantitative monitoring of gene expression patterns with a complementary DNA microarray
-
Schena M, Shalon D, Davis RW, Brown PO: Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 1995, 270:467-470.
-
(1995)
Science
, vol.270
, pp. 467-470
-
-
Schena, M.1
Shalon, D.2
Davis, R.W.3
Brown, P.O.4
-
2
-
-
10544256600
-
Expression monitoring by hybridization to high-density oligonucleotide arrays
-
Lockhart DJ, Dong H, Byrne MC, Follettie MT, Gallo MV, Chee MS, Mittmann M, Wang C, Kobayashi M, Horton H, Brown EL: Expression monitoring by hybridization to high-density oligonucleotide arrays. Nat Biotechnol 1996, 14:1675-1680.
-
(1996)
Nat Biotechnol
, vol.14
, pp. 1675-1680
-
-
Lockhart, D.J.1
Dong, H.2
Byrne, M.C.3
Follettie, M.T.4
Gallo, M.V.5
Chee, M.S.6
Mittmann, M.7
Wang, C.8
Kobayashi, M.9
Horton, H.10
Brown, E.L.11
-
3
-
-
0035887459
-
Molecular classification of human carcinomas by use of gene expression signatures
-
Su AI, Welsh JB, Sapinoso LM, Kern SG, Dimitrov P, Lapp H, Schultz PG, Powell SM, Moskaluk CA, Frierson HF Jr, Hampton GM: Molecular classification of human carcinomas by use of gene expression signatures. Cancer Res 2001, 61:7388-7393.
-
(2001)
Cancer Res
, vol.61
, pp. 7388-7393
-
-
Su, A.I.1
Welsh, J.B.2
Sapinoso, L.M.3
Kern, S.G.4
Dimitrov, P.5
Lapp, H.6
Schultz, P.G.7
Powell, S.M.8
Moskaluk, C.A.9
Frierson, H.F.10
Hampton, G.M.11
-
4
-
-
0347201147
-
Multiclass cancer diagnosis using tumor gene expression signatures
-
Ramaswamy S, Tamayo P, Rifkin R, Mukherjee S, Yeang CH, Angelo M, Ladd C, Reich M, Latulippe E, Mesirov JP, et al.: Multiclass cancer diagnosis using tumor gene expression signatures. Proc Natl Acad Sci USA 2001, 98:15149-15154.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 15149-15154
-
-
Ramaswamy, S.1
Tamayo, P.2
Rifkin, R.3
Mukherjee, S.4
Yeang, C.H.5
Angelo, M.6
Ladd, C.7
Reich, M.8
Latulippe, E.9
Mesirov, J.P.10
-
5
-
-
1542574379
-
Multi-platform, multi-site, microarray-based human tumor classification
-
Bloom G, Yang IV, Boulware D, Kwong KY, Coppola D, Eschrich S, Quackenbush J, Yeatman TJ: Multi-platform, multi-site, microarray-based human tumor classification. Am J Pathol 2004, 164:9-16.
-
(2004)
Am J Pathol
, vol.164
, pp. 9-16
-
-
Bloom, G.1
Yang, I.V.2
Boulware, D.3
Kwong, K.Y.4
Coppola, D.5
Eschrich, S.6
Quackenbush, J.7
Yeatman, T.J.8
-
6
-
-
0034598746
-
Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling
-
Alizadeh AA, Eisen MB, Davis RE, Ma C, Lossos IS, Rosenwald A, Boldrick JC, Sabet H, Tran T, Yu X, et al.: Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature 2000, 403:503-511.
-
(2000)
Nature
, vol.403
, pp. 503-511
-
-
Alizadeh, A.A.1
Eisen, M.B.2
Davis, R.E.3
Ma, C.4
Lossos, I.S.5
Rosenwald, A.6
Boldrick, J.C.7
Sabet, H.8
Tran, T.9
Yu, X.10
-
7
-
-
0034601455
-
Molecular classification of cutaneous malignant melanoma by gene expression profiling
-
Bittner M, Meltzer P, Chen Y, Jiang Y, Seftor E, Hendrix M, Radmacher M, Simon R, Yakhini Z, Ben-Dor A, et al.: Molecular classification of cutaneous malignant melanoma by gene expression profiling. Nature 2000, 406:536-540.
-
(2000)
Nature
, vol.406
, pp. 536-540
-
-
Bittner, M.1
Meltzer, P.2
Chen, Y.3
Jiang, Y.4
Seftor, E.5
Hendrix, M.6
Radmacher, M.7
Simon, R.8
Yakhini, Z.9
Ben-Dor, A.10
-
8
-
-
0034680102
-
Molecular portraits of human breast tumours
-
Perou CM, Sorlie T, Eisen MB, van de Rijn M, Jeffrey SS, Rees CA, Pollack JR, Ross DT, Johnsen H, Akslen LA, et al.: Molecular portraits of human breast tumours. Nature 2000, 406:747-752.
-
(2000)
Nature
, vol.406
, pp. 747-752
-
-
Perou, C.M.1
Sorlie, T.2
Eisen, M.B.3
van de Rijn, M.4
Jeffrey, S.S.5
Rees, C.A.6
Pollack, J.R.7
Ross, D.T.8
Johnsen, H.9
Akslen, L.A.10
-
9
-
-
0035923521
-
Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses
-
Bhattacharjee A, Richards WG, Staunton J, Li C, Monti S, Vasa P, Ladd C, Beheshti J, Bueno R, Gillette M, et al.: Classification of human lung carcinomas by mRNA expression profiling reveals distinct adenocarcinoma subclasses. Proc Natl Acad Sci USA 2001, 98:13790-13795.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 13790-13795
-
-
Bhattacharjee, A.1
Richards, W.G.2
Staunton, J.3
Li, C.4
Monti, S.5
Vasa, P.6
Ladd, C.7
Beheshti, J.8
Bueno, R.9
Gillette, M.10
-
10
-
-
0035923583
-
Diversity of gene expression in adenocarcinoma of the lung
-
Garber ME, Troyanskaya OG, Schluens K, Petersen S, Thaesler Z, Pacyna-Gengelbach M, van De Rijn M, Rosen GD, Perou CM, Whyte RI, et al.: Diversity of gene expression in adenocarcinoma of the lung. Proc Natl Acad Sci USA 2001, 98:13784-13789.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 13784-13789
-
-
Garber, M.E.1
Troyanskaya, O.G.2
Schluens, K.3
Petersen, S.4
Thaesler, Z.5
Pacyna-Gengelbach, M.6
van De Rijn, M.7
Rosen, G.D.8
Perou, C.M.9
Whyte, R.I.10
-
11
-
-
9144251970
-
Gene expression profiling identifies clinically relevant subtypes of prostate cancer
-
Lapointe J, Li C, Higgins JP, Van De Rijn M, Bair E, Montgomery K, Ferrari M, Egevad L, Rayford W, Bergerheim U, et al.: Gene expression profiling identifies clinically relevant subtypes of prostate cancer. Proc Natl Acad Sci USA 2004, 101:811-816.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 811-816
-
-
Lapointe, J.1
Li, C.2
Higgins, J.P.3
Van De Rijn, M.4
Bair, E.5
Montgomery, K.6
Ferrari, M.7
Egevad, L.8
Rayford, W.9
Bergerheim, U.10
-
12
-
-
18244409687
-
Gene expression profiling predicts clinical outcome of breast cancer
-
van 't Veer LJ, Dai H, van de Vijver MJ, He YD, Hart AA, Mao M, Peterse HL, van der Kooy K, Marton MJ, Witteveen AT, et al.: Gene expression profiling predicts clinical outcome of breast cancer. Nature 2002, 415:530-536.
-
(2002)
Nature
, vol.415
, pp. 530-536
-
-
van 't Veer, L.J.1
Dai, H.2
van de Vijver, M.J.3
He, Y.D.4
Hart, A.A.5
Mao, M.6
Peterse, H.L.7
van der Kooy, K.8
Marton, M.J.9
Witteveen, A.T.10
-
13
-
-
18244409933
-
Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning
-
Shipp MA, Ross KN, Tamayo P, Weng AP, Kutok JL, Aguiar RC, Gaasenbeek M, Angelo M, Reich M, Pinkus GS, et al.: Diffuse large B-cell lymphoma outcome prediction by gene-expression profiling and supervised machine learning. Nat Med 2002, 8:68-74.
-
(2002)
Nat Med
, vol.8
, pp. 68-74
-
-
Shipp, M.A.1
Ross, K.N.2
Tamayo, P.3
Weng, A.P.4
Kutok, J.L.5
Aguiar, R.C.6
Gaasenbeek, M.7
Angelo, M.8
Reich, M.9
Pinkus, G.S.10
-
14
-
-
0037059002
-
Phospholipase A2 group IIA expression in gastric adenocarcinoma is associated with prolonged survival and less frequent metastasis
-
Leung SY, Chen X, Chu KM, Yuen ST, Mathy J, Ji J, Chan AS, Li R, Law S, Troyanskaya OG, et al.: Phospholipase A2 group IIA expression in gastric adenocarcinoma is associated with prolonged survival and less frequent metastasis. Proc Natl Acad Sci USA 2002, 99:16203-16208.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 16203-16208
-
-
Leung, S.Y.1
Chen, X.2
Chu, K.M.3
Yuen, S.T.4
Mathy, J.5
Ji, J.6
Chan, A.S.7
Li, R.8
Law, S.9
Troyanskaya, O.G.10
-
15
-
-
0013312329
-
Inhibition of FLT3 in MLL. Validation of a therapeutic target identified by gene expression based classification
-
Armstrong SA, Kung AL, Mabon ME, Silverman LB, Stam RW, Den Boer ML, Pieters R, Kersey JH, Sallan SE, Fletcher JA, et al.: Inhibition of FLT3 in MLL. Validation of a therapeutic target identified by gene expression based classification. Cancer Cell 2003, 3:173-183.
-
(2003)
Cancer Cell
, vol.3
, pp. 173-183
-
-
Armstrong, S.A.1
Kung, A.L.2
Mabon, M.E.3
Silverman, L.B.4
Stam, R.W.5
Den Boer, M.L.6
Pieters, R.7
Kersey, J.H.8
Sallan, S.E.9
Fletcher, J.A.10
-
16
-
-
1442335997
-
Gene expression-based high-throughput screening(GEHTS) and application to leukemia differentiation
-
Stegmaier K, Ross KN, Colavito SA, O'Malley S, Stockwell BR, Golub TR: Gene expression-based high-throughput screening(GEHTS) and application to leukemia differentiation. Nat Genet 2004, 36:257-263.
-
(2004)
Nat Genet
, vol.36
, pp. 257-263
-
-
Stegmaier, K.1
Ross, K.N.2
Colavito, S.A.3
O'Malley, S.4
Stockwell, B.R.5
Golub, T.R.6
-
17
-
-
0034720002
-
Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes
-
Warrington JA, Nair A, Mahadevappa M, Tsyganskaya M: Comparison of human adult and fetal expression and identification of 535 housekeeping/maintenance genes. Physiol Genomics 2000, 2:143-147.
-
(2000)
Physiol Genomics
, vol.2
, pp. 143-147
-
-
Warrington, J.A.1
Nair, A.2
Mahadevappa, M.3
Tsyganskaya, M.4
-
18
-
-
0035931072
-
A compendium of gene expression in normal human tissues
-
Hsiao LL, Dangond F, Yoshida T, Hong R, Jensen RV, Misra J, Dillon W, Lee KF, Clark KE, Haverty P, et al.: A compendium of gene expression in normal human tissues. Physiol Genomics 2001, 7:97-104.
-
(2001)
Physiol Genomics
, vol.7
, pp. 97-104
-
-
Hsiao, L.L.1
Dangond, F.2
Yoshida, T.3
Hong, R.4
Jensen, R.V.5
Misra, J.6
Dillon, W.7
Lee, K.F.8
Clark, K.E.9
Haverty, P.10
-
19
-
-
0036924161
-
Genome-wide profiling of gene expression in 29 normal human tissues with a cDNA microarray
-
Saito-Hisaminato A, Katagiri T, Kakiuchi S, Nakamura T, Tsunoda T, Nakamura Y: Genome-wide profiling of gene expression in 29 normal human tissues with a cDNA microarray. DNA Res 2002, 9:35-45.
-
(2002)
DNA Res
, vol.9
, pp. 35-45
-
-
Saito-Hisaminato, A.1
Katagiri, T.2
Kakiuchi, S.3
Nakamura, T.4
Tsunoda, T.5
Nakamura, Y.6
-
20
-
-
0037007048
-
Large-scale analysis of the human and mouse transcriptomes
-
Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, Wiltshire T, Orth AP, Vega RG, Sapinoso LM, Moqrich A, et al.: Large-scale analysis of the human and mouse transcriptomes. Proc Natl Acad Sci USA 2002, 99:4465-4470.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 4465-4470
-
-
Su, A.I.1
Cooke, M.P.2
Ching, K.A.3
Hakak, Y.4
Walker, J.R.5
Wiltshire, T.6
Orth, A.P.7
Vega, R.G.8
Sapinoso, L.M.9
Moqrich, A.10
-
21
-
-
0031256078
-
Pieces of the puzzle: expressed sequence tags and the catalog of human genes
-
Schuler GD: Pieces of the puzzle: expressed sequence tags and the catalog of human genes. J Mol Med 1997, 75:694-698.
-
(1997)
J Mol Med
, vol.75
, pp. 694-698
-
-
Schuler, G.D.1
-
22
-
-
0034839884
-
Control and impairment of immune privilege in the testis and in semen
-
Filippini A, Riccioli A, Padula F, Lauretti P, D'Alessio A, De Cesaris P, Gandini L, Lenzi A, Ziparo E: Control and impairment of immune privilege in the testis and in semen. Hum Reprod Update 2001, 7:444-449.
-
(2001)
Hum Reprod Update
, vol.7
, pp. 444-449
-
-
Filippini, A.1
Riccioli, A.2
Padula, F.3
Lauretti, P.4
D'Alessio, A.5
De Cesaris, P.6
Gandini, L.7
Lenzi, A.8
Ziparo, E.9
-
23
-
-
13044304179
-
Distinctive gene expression patterns in human mammary epithelial cells and breast cancers
-
Perou CM, Jeffrey SS, van de Rijn M, Rees CA, Eisen MB, Ross DT, Pergamenschikov A, Williams CF, Zhu SX, Lee JC, et al.: Distinctive gene expression patterns in human mammary epithelial cells and breast cancers. Proc Natl Acad Sci USA 1999, 96:9212-9217.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 9212-9217
-
-
Perou, C.M.1
Jeffrey, S.S.2
van de Rijn, M.3
Rees, C.A.4
Eisen, M.B.5
Ross, D.T.6
Pergamenschikov, A.7
Williams, C.F.8
Zhu, S.X.9
Lee, J.C.10
-
24
-
-
0032823523
-
Genome-wide analysis of DNA copy-number changes using cDNA microarrays
-
Pollack JR, Perou CM, Alizadeh AA, Eisen MB, Pergamenschikov A, Williams CF, Jeffrey SS, Botstein D, Brown PO: Genome-wide analysis of DNA copy-number changes using cDNA microarrays. Nat Genet 1999, 23:41-46.
-
(1999)
Nat Genet
, vol.23
, pp. 41-46
-
-
Pollack, J.R.1
Perou, C.M.2
Alizadeh, A.A.3
Eisen, M.B.4
Pergamenschikov, A.5
Williams, C.F.6
Jeffrey, S.S.7
Botstein, D.8
Brown, P.O.9
-
25
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
Tusher VG, Tibshirani R, Chu G: Significance analysis of microarrays applied to the ionizing radiation response. Proc Natl Acad Sci USA 2001, 98:5116-5121.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 5116-5121
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
26
-
-
0034069495
-
Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, et al.: Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 2000, 25:25-29.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
-
27
-
-
0033031437
-
DNA arrays for analysis of gene expression
-
Eisen MB, Brown PO: DNA arrays for analysis of gene expression. Methods Enzymol 1999, 303:179-205.
-
(1999)
Methods Enzymol
, vol.303
, pp. 179-205
-
-
Eisen, M.B.1
Brown, P.O.2
-
28
-
-
84991757410
-
-
Pat Brown's Lab Protocols [http://brownlab.stanford.edu/proto cols.html]
-
-
-
-
29
-
-
0037249405
-
The Stanford Microarray Database: data access and quality assessment tools
-
Gollub J, Ball CA, Binkley G, Demeter J, Finkelstein DB, Hebert JM, Hernandez-Boussard T, Jin H, Kaloper M, Matese JC, et al.: The Stanford Microarray Database: data access and quality assessment tools. Nucleic Acids Res 2003, 31:94-96.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 94-96
-
-
Gollub, J.1
Ball, C.A.2
Binkley, G.3
Demeter, J.4
Finkelstein, D.B.5
Hebert, J.M.6
Hernandez-Boussard, T.7
Jin, H.8
Kaloper, M.9
Matese, J.C.10
-
30
-
-
84991755716
-
-
Stanford Microarray Database [http://smd.stanford.edu]
-
-
-
-
31
-
-
84991797652
-
-
Gene Expression Omnibus (GEO) [http://www.ncbi.nlm.nih.gov/geo]
-
-
-
-
32
-
-
84991778858
-
-
EisenLab Software [http://rana.lbl.gov/EisenSoftware.htm]
-
-
-
-
33
-
-
84991742376
-
-
AmiGO [http://www.godatabase.org/cgi-bin/go.cgi]
-
-
-
-
34
-
-
84991819875
-
-
NCBI loc2go [ftp://ftp.ncbi.nih.gov/refseq/LocusLink/loc2go]
-
-
-
|