Using CisGenome to analyze ChIP-chip and ChIP-seq data

Current Protocols in Bioinformatics

Volumn , Issue SUPP.33, 2011, Pages 1-45

  Ji, Hongkai ^a   Jiang, Hui ^b   Ma, Wenxiu ^b   Wong, Wing Hung ^b  

^a JOHNS HOPKINS UNIVERSITY   (United States)

^b STANFORD UNIVERSITY   (United States)

Author keywords

Chromatin immunoprecipitation; Gene regulation; Motif; Next generation sequencing; Tiling array; Transcription factor

Indexed keywords

TRANSCRIPTION FACTOR;

ARTICLE; BINDING SITE; CHROMATIN; CHROMATIN IMMUNOPRECIPITATION; COMPUTER PROGRAM; DATA ANALYSIS; DNA MICROARRAY; DNA SEQUENCE; GENOME; GENOME ANALYSIS; GENOMICS; HYBRIDIZATION; METHODOLOGY; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN MOTIF; SIGNAL TRANSDUCTION; TECHNOLOGY;

BASE SEQUENCE; BINDING SITES; CHROMATIN IMMUNOPRECIPITATION; GENOME; GENOMICS; METHODS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 80052020636     PISSN: 19343396     EISSN: 1934340X     Source Type: Journal    
DOI: 10.1002/0471250953.bi0213s33     Document Type: Article

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