-
1
-
-
56549101959
-
Alternative isoform regulation in human tissue transcriptomes
-
DOI 10.1038/nature07509, PII NATURE07509
-
Wang, E.T., Sandberg, R., Luo, S., Khrebtukova, I., Zhang, L., Mayr, C., Kingsmore, S.F., Schroth, G.P. and Burge, C.B. (2008) Alternative isoform regulation in human tissue transcriptomes. Nature, 456, 470-476. (Pubitemid 352759009)
-
(2008)
Nature
, vol.456
, Issue.7221
, pp. 470-476
-
-
Wang, E.T.1
Sandberg, R.2
Luo, S.3
Khrebtukova, I.4
Zhang, L.5
Mayr, C.6
Kingsmore, S.F.7
Schroth, G.P.8
Burge, C.B.9
-
2
-
-
42449129287
-
Searching for splicing motifs
-
Chasin, L.A. (2007) Searching for splicing motifs. Adv. Exp. Med. Biol., 623, 85-106.
-
(2007)
Adv. Exp. Med. Biol.
, vol.623
, pp. 85-106
-
-
Chasin, L.A.1
-
3
-
-
42449098125
-
Splicing regulation: From a parts list of regulatory elements to an integrated splicing code
-
DOI 10.1261/rna.876308
-
Wang, Z. and Burge, B. (2008) Splicing regulation: from a parts list of regulatory elements to an integrated splicing code. RNA, 14, 802-813. (Pubitemid 351574901)
-
(2008)
RNA
, vol.14
, Issue.5
, pp. 802-813
-
-
Wang, Z.1
Burge, C.B.2
-
4
-
-
77952029221
-
Deciphering the splicing code
-
Barash, Y., Calarco, J.A., Gao, W., Pan, Q., Wang, X., Shai, O., Blencowe, B.J. and Frey, B.J. (2010) Deciphering the splicing code. Nature, 465, 53-59.
-
(2010)
Nature
, vol.465
, pp. 53-59
-
-
Barash, Y.1
Calarco, J.A.2
Gao, W.3
Pan, Q.4
Wang, X.5
Shai, O.6
Blencowe, B.J.7
Frey, B.J.8
-
5
-
-
57849150788
-
Alternative splicing and disease
-
Tazi, J., Bakkour, N. and Stamm, S. (2009) Alternative splicing and disease. Biochim. Biophys. Acta, 1792, 14-26.
-
(2009)
Biochim. Biophys. Acta
, vol.1792
, pp. 14-26
-
-
Tazi, J.1
Bakkour, N.2
Stamm, S.3
-
7
-
-
0031800293
-
Modification of splicing in the dystrophin gene in cultured Mdx muscle cells by antisense oligoribonucleotides
-
DOI 10.1093/hmg/7.7.1083
-
Dunckley, M.G., Manoharan, M., Villiet, P., Eperon, I.C. and Dickson, G. (1998) Modification of splicing in the dystrophin gene in cultured Mdx muscle cells by antisense oligoribonucleotides. Hum. Mol. Genet., 7, 1083-1090. (Pubitemid 28306871)
-
(1998)
Human Molecular Genetics
, vol.7
, Issue.7
, pp. 1083-1090
-
-
Dunckley, M.G.1
Manoharan, M.2
Villiet, P.3
Eperon, I.C.4
Dickson, G.5
-
8
-
-
77951959803
-
Exonic sequences provide better targets for antisense oligonucleotides than splice site sequences in the modulation of Duchenne muscular dystrophy splicing
-
Aartsma-Rus, A., Houlleberghs, H., van Deutekom, J.C., van Ommen, G.J. and Hoen, P.A. (2010) Exonic sequences provide better targets for antisense oligonucleotides than splice site sequences in the modulation of Duchenne muscular dystrophy splicing. Oligonucleotides, 20, 69-77.
-
(2010)
Oligonucleotides
, vol.20
, pp. 69-77
-
-
Aartsma-Rus, A.1
Houlleberghs, H.2
Van Deutekom, J.C.3
Van Ommen, G.J.4
Hoen, P.A.5
-
9
-
-
61649109478
-
Design of phosphorodiamidate morpholino oligomers (PMOs) for the induction of exon skipping of the human DMD gene
-
Popplewell, L.J., Trollet, C., Dickson, G. and Graham, I.R. (2009) Design of phosphorodiamidate morpholino oligomers (PMOs) for the induction of exon skipping of the human DMD gene. Mol. Ther., 17, 554-561.
-
(2009)
Mol. Ther.
, vol.17
, pp. 554-561
-
-
Popplewell, L.J.1
Trollet, C.2
Dickson, G.3
Graham, I.R.4
-
10
-
-
69949107887
-
Local restoration of dystrophin expression with the morpholino oligomer AVI-4658 in Duchenne muscular dystrophy: A single-blind, placebo-controlled, doseescalation, proof-of-concept study
-
Kinali, M., Arechavala-Gomeza, V., Feng, L., Cirak, S., Hunt, D., Adkin, C., Guglieri, M., Ashton, E., Abbs, S., Nihoyannopoulos, P. et al. (2009) Local restoration of dystrophin expression with the morpholino oligomer AVI-4658 in Duchenne muscular dystrophy: a single-blind, placebo-controlled, doseescalation, proof-of-concept study. Lancet Neurol., 8, 918-928.
-
(2009)
Lancet Neurol.
, vol.8
, pp. 918-928
-
-
Kinali, M.1
Arechavala-Gomeza, V.2
Feng, L.3
Cirak, S.4
Hunt, D.5
Adkin, C.6
Guglieri, M.7
Ashton, E.8
Abbs, S.9
Nihoyannopoulos, P.10
-
11
-
-
37549034298
-
Local dystrophin restoration with antisense oligonucleotide PRO051
-
van Deutekom, J.C., Janson, A.A., Ginjaar, I.B., Frankhuizen, W.S., Aartsma-Rus, A., Bremmer-Bout, M., den Dunnen, J.T., Koop, K., van der Kooi, A.J., Goemans, N.M. et al. (2007) Local dystrophin restoration with antisense oligonucleotide PRO051. N. Engl. J. Med., 357, 2677-2686.
-
(2007)
N. Engl. J. Med.
, vol.357
, pp. 2677-2686
-
-
Van Deutekom, J.C.1
Janson, A.A.2
Ginjaar, I.B.3
Frankhuizen, W.S.4
Aartsma-Rus, A.5
Bremmer-Bout, M.6
Den Dunnen, J.T.7
Koop, K.8
Van Der Kooi, A.J.9
Goemans, N.M.10
-
12
-
-
29144463310
-
Spinal muscular atrophy: A deficiency in a ubiquitous protein; a motor neuron-specific disease
-
DOI 10.1016/j.neuron.2005.12.001, PII S0896627305010111
-
Monani, U.R. (2005) Spinal muscular atrophy: a deficiency in a ubiquitous protein; a motor neuron-specific disease. Neuron, 48, 885-896. (Pubitemid 41814694)
-
(2005)
Neuron
, vol.48
, Issue.6
, pp. 885-896
-
-
Monani, U.R.1
-
13
-
-
34247388843
-
Enhancement of SMN2 Exon 7 inclusion by antisense oligonucleotides targeting the exon
-
Hua, Y., Vickers, T.A., Baker, B.F., Bennett, C.F. and Krainer, A.R. (2007) Enhancement of SMN2 Exon 7 Inclusion by Antisense Oligonucleotides Targeting the Exon. PLoS Biol., 5, e73.
-
(2007)
PLoS Biol.
, vol.5
-
-
Hua, Y.1
Vickers, T.A.2
Baker, B.F.3
Bennett, C.F.4
Krainer, A.R.5
-
14
-
-
41549168514
-
Antisense masking of an hnRNP A1/A2 intronic splicing silencer corrects SMN2 splicing in transgenic mice
-
Hua, Y., Vickers, T.A., Okunola, H.L., Bennett, C.F. and Krainer, A.R. (2008) Antisense masking of an hnRNP A1/A2 intronic splicing silencer corrects SMN2 splicing in transgenic mice. Am. J. Hum. Genet., 82, 834-848.
-
(2008)
Am. J. Hum. Genet.
, vol.82
, pp. 834-848
-
-
Hua, Y.1
Vickers, T.A.2
Okunola, H.L.3
Bennett, C.F.4
Krainer, A.R.5
-
15
-
-
0037388256
-
Bifunctional antisense oligonucleotides provide a trans-acting splicing enhancer that stimulates SMN2 gene expression in patient fibroblasts
-
DOI 10.1073/pnas.0633863100
-
Skordis, L.A., Dunckley, M.G., Yue, B., Eperon, I.C. and Muntoni, F. (2003) Bifunctional antisense oligonucleotides provide a trans-acting splicing enhancer that stimulates SMN2 gene expression in patient fibroblasts. Proc. Natl Acad. Sci. USA, 100, 4114-4119. (Pubitemid 36418166)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.7
, pp. 4114-4119
-
-
Skordis, L.A.1
Dunckley, M.G.2
Yue, B.3
Eperon, I.C.4
Muntoni, F.5
-
16
-
-
0038603946
-
Response to Buratti et al.: Can a 'patch' in a skipped exon make the pre-mRNA splicing machine run better?
-
DOI 10.1016/S1471-4914(03)00068-6
-
Eperon, I.C. and Muntoni, F. (2003) Response to Buratti et al.: Can a 'patch' in a skipped exon make the pre-mRNA splicing machine run better? Trends Mol. Med., 9, 233-234. (Pubitemid 36841680)
-
(2003)
Trends in Molecular Medicine
, vol.9
, Issue.6
, pp. 233-234
-
-
Eperon, I.C.1
Muntoni, F.2
-
17
-
-
0037313165
-
Correction of disease-associated exon skipping by synthetic exon-specific activators
-
DOI 10.1038/nsb887
-
Cartegni, L. and Krainer, A.R. (2003) Correction of disease-associated exon skipping by synthetic exon-specific activators. Nat. Struct. Biol., 10, 120-125. (Pubitemid 36177092)
-
(2003)
Nature Structural Biology
, vol.10
, Issue.2
, pp. 120-125
-
-
Cartegni, L.1
Krainer, A.R.2
-
18
-
-
58749114204
-
Rescue of a severe mouse model for spinal muscular atrophy by U7 snRNA-mediated splicing modulation
-
Meyer, K., Marquis, J., Trub, J., Nlend Nlend, R., Verp, S., Ruepp, M.D., Imboden, H., Barde, I., Trono, D. and Schumperli, D. (2009) Rescue of a severe mouse model for spinal muscular atrophy by U7 snRNA-mediated splicing modulation. Hum. Mol. Genet., 18, 546-555.
-
(2009)
Hum. Mol. Genet.
, vol.18
, pp. 546-555
-
-
Meyer, K.1
Marquis, J.2
Trub, J.3
Nlend Nlend, R.4
Verp, S.5
Ruepp, M.D.6
Imboden, H.7
Barde, I.8
Trono, D.9
Schumperli, D.10
-
19
-
-
64549161948
-
Delivery of bifunctional RNAs that target an intronic repressor and increase SMN levels in an animal model of spinal muscular atrophy
-
Baughan, T.D., Dickson, A., Osman, E.Y. and Lorson, C.L. (2009) Delivery of bifunctional RNAs that target an intronic repressor and increase SMN levels in an animal model of spinal muscular atrophy. Hum. Mol. Genet., 18, 1600-1611.
-
(2009)
Hum. Mol. Genet.
, vol.18
, pp. 1600-1611
-
-
Baughan, T.D.1
Dickson, A.2
Osman, E.Y.3
Lorson, C.L.4
-
20
-
-
17044427579
-
Serine/arginine-rich protein-dependent suppression of exon skipping by exonic splicing enhancers
-
Ibrahim, E.C., Schaal, T.D., Hertel, K.J., Reed, R. and Maniatis, T. (2005) Serine/arginine-rich protein-dependent suppression of exon skipping by exonic splicing enhancers. Proc. Natl Acad. Sci. USA, 102, 5002-5007.
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 5002-5007
-
-
Ibrahim, E.C.1
Schaal, T.D.2
Hertel, K.J.3
Reed, R.4
Maniatis, T.5
-
21
-
-
0027185151
-
A splicing enhancer complex controls alternative splicing of doublesex pre-mRNA
-
DOI 10.1016/0092-8674(93)90298-5
-
Tian, M. and Maniatis, T. (1993) A splicing enhancer complex controls alternative splicing of doublesex pre-mRNA. Cell, 74, 105-114. (Pubitemid 23219882)
-
(1993)
Cell
, vol.74
, Issue.1
, pp. 105-114
-
-
Tian, M.1
Maniatis, T.2
-
22
-
-
0027137934
-
Specific interactions between proteins implicated in splice site selection and regulated alternative splicing
-
DOI 10.1016/0092-8674(93)90316-I
-
Wu, J.Y. and Maniatis, T. (1993) Specific interactions between proteins implicated in splice site selection and regulated alternative splicing. Cell, 75, 1061-1070. (Pubitemid 24006103)
-
(1993)
Cell
, vol.75
, Issue.6
, pp. 1061-1070
-
-
Wu, J.Y.1
Maniatis, T.2
-
23
-
-
0027313349
-
Pathways for selection of 5' splice sites by U1 snRNPs and SF2/ASF
-
Eperon, I.C., Ireland, D.C., Smith, R.A., Mayeda, A. and Krainer, A.R. (1993) Pathways for selection of 50 splice sites by U1 snRNPs and SF2/ASF. EMBO J., 12, 3607-3617. (Pubitemid 23256447)
-
(1993)
EMBO Journal
, vol.12
, Issue.9
, pp. 3607-3617
-
-
Eperon, I.C.1
Ireland, D.C.2
Smith, R.A.3
Mayeda, A.4
Krainer, A.R.5
-
24
-
-
0027501327
-
Functional analysis of pre-mRNA splicing factor SF2/ASF structural domains
-
Caceres, J.F. and Krainer, A.R. (1993) Functional analysis of pre-mRNA splicing factor SF2/ASF structural domains. EMBO J., 12, 4715-4726. (Pubitemid 23330277)
-
(1993)
EMBO Journal
, vol.12
, Issue.12
, pp. 4715-4726
-
-
Caceres, J.F.1
Krainer, A.R.2
-
25
-
-
0027494389
-
Functional domains of the human splicing factor ASF/SF2
-
Zuo, P. and Manley, J.L. (1993) Functional domains of the human splicing factor ASF/SF2. EMBO J., 12, 4727-4737. (Pubitemid 23330278)
-
(1993)
EMBO Journal
, vol.12
, Issue.12
, pp. 4727-4737
-
-
Zuo, P.1
Manley, J.L.2
-
26
-
-
0033762534
-
Selection of alternative 50 splice sites: Role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1
-
Eperon, I.C., Makarova, O.V., Mayeda, A., Munroe, S.H., Caceres, J.F., Hayward, D.G. and Krainer, A.R. (2000) Selection of alternative 50 splice sites: role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1. Mol. Cell. Biol., 20, 8303-8318.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 8303-8318
-
-
Eperon, I.C.1
Makarova, O.V.2
Mayeda, A.3
Munroe, S.H.4
Caceres, J.F.5
Hayward, D.G.6
Krainer, A.R.7
-
27
-
-
0029258817
-
Intrinsic U2AF binding is modulated by exon enhancer signals in parallel with changes in splicing activity
-
Wang, Z., Hoffmann, H.M. and Grabowski, P.J. (1995) Intrinsic U2AF binding is modulated by exon enhancer signals in parallel with changes in splicing activity. RNA, 1, 21-35.
-
(1995)
RNA
, vol.1
, pp. 21-35
-
-
Wang, Z.1
Hoffmann, H.M.2
Grabowski, P.J.3
-
28
-
-
0029665533
-
35 mediates critical protein-protein interactions in constitutive and enhancer-dependent splicing
-
Zuo, P. and Maniatis, T. (1996) The splicing factor U2AF35 mediates critical protein-protein interactions in constitutive and enhancer-dependent splicing. Genes Dev., 10, 1356-1368. (Pubitemid 26260715)
-
(1996)
Genes and Development
, vol.10
, Issue.11
, pp. 1356-1368
-
-
Zuo, P.1
Maniatis, T.2
-
29
-
-
8644268780
-
A pathway of sequential Arginine-Serine-Rich Domain-Splicing signal interactions during mammalian spliceosome assembly
-
DOI 10.1016/j.molcel.2004.10.021, PII S1097276504006379
-
Shen, H. and Green, M.R. (2004) A pathway of sequential arginine-serine-rich domain-splicing signal interactions during mammalian spliceosome assembly. Mol. Cell, 16, 363-373. (Pubitemid 39504791)
-
(2004)
Molecular Cell
, vol.16
, Issue.3
, pp. 363-373
-
-
Shen, H.1
Green, M.R.2
-
30
-
-
34447130937
-
RS domain-splicing signal interactions in splicing of U12-type and U2-type introns
-
DOI 10.1038/nsmb1263, PII NSMB1263
-
Shen, H. and Green, M.R. (2007) RS domain-splicing signal interactions in splicing of U12-type and U2-type introns. Nat. Struct. Mol. Biol., 14, 597-603. (Pubitemid 47037070)
-
(2007)
Nature Structural and Molecular Biology
, vol.14
, Issue.7
, pp. 597-603
-
-
Shen, H.1
Green, M.R.2
-
31
-
-
0032128255
-
Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins
-
Liu, H.X., Zhang, M. and Krainer, A.R. (1998) Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins. Genes Dev., 12, 1998-2012. (Pubitemid 28323874)
-
(1998)
Genes and Development
, vol.12
, Issue.13
, pp. 1998-2012
-
-
Liu, H.-X.1
Zhang, M.2
Krainer, A.R.3
-
32
-
-
33747891736
-
An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers
-
DOI 10.1093/hmg/ddl171
-
Smith, P.J., Zhang, C., Wang, J., Chew, S.L., Zhang, M.Q. and Krainer, A.R. (2006) An increased specificity score matrix for the prediction of SF2/ASF-specific exonic splicing enhancers. Hum. Mol. Genet., 15, 2490-2508. (Pubitemid 44288702)
-
(2006)
Human Molecular Genetics
, vol.15
, Issue.16
, pp. 2490-2508
-
-
Smith, P.J.1
Zhang, C.2
Wang, J.3
Chew, S.L.4
Zhang, M.Q.5
Krainer, A.R.6
-
33
-
-
0033983258
-
An exonic enhancer is required for inclusion of an essential exon in the SMA-determining gene SMN
-
Lorson, C.L. and Androphy, E.J. (2000) An exonic enhancer is required for inclusion of an essential exon in the SMA-determining gene SMN. Hum. Mol. Genet., 9, 259-265.
-
(2000)
Hum. Mol. Genet.
, vol.9
, pp. 259-265
-
-
Lorson, C.L.1
Androphy, E.J.2
-
34
-
-
0034662922
-
Htra2-β1 stimulates an exonic splicing enhancer and can restore full-length SMN expression to survival motor neuron 2 (SMN2)
-
Hofmann, Y., Lorson, C.L., Stamm, S., Androphy, E.J. and Wirth, B. (2000) Htra2-beta 1 stimulates an exonic splicing enhancer and can restore full-length SMN expression to survival motor neuron 2 (SMN2). Proc. Natl Acad. Sci USA, 97, 9618-9623. (Pubitemid 30650825)
-
(2000)
Proceedings of the National Academy of Sciences of the United States of America
, vol.97
, Issue.17
, pp. 9618-9623
-
-
Hofmann, Y.1
Lorson, C.L.2
Stamm, S.3
Androphy, E.J.4
Wirth, B.5
-
35
-
-
17344376224
-
The conformations of locked nucleic acids (LNA)
-
DOI 10.1002/(SICI)1099-1352(200001/02)13:1<44::AID-JMR486>3.0.CO;2- 6
-
Petersen, M., Nielsen, C.B., Nielsen, K.E., Jensen, G.A., Bondensgaard, K., Singh, S.K., Rajwanshi, V.K., Koshkin, A.A., Dahl, B.M., Wengel, J. et al. (2000) The conformations of locked nucleic acids (LNA). J. Mol. Recognit., 13, 44-53. (Pubitemid 30144434)
-
(2000)
Journal of Molecular Recognition
, vol.13
, Issue.1
, pp. 44-53
-
-
Petersen, M.1
Nielsen, C.B.2
Nielsen, K.E.3
Jensen, G.A.4
Bondensgaard, K.5
Singh, S.K.6
Rajwanshi, V.K.7
Koshkin, A.A.8
Dahl, B.M.9
Wengel, J.10
Jacobsen, J.P.11
-
36
-
-
0031990320
-
The function of multisite splicing enhancers
-
Hertel, K.J. and Maniatis, T. (1998) The function of multisite splicing enhancers. Mol. Cell, 1, 449-455. (Pubitemid 128378893)
-
(1998)
Molecular Cell
, vol.1
, Issue.3
, pp. 449-455
-
-
Hertel, K.J.1
Maniatis, T.2
-
37
-
-
75949115944
-
Noncooperative interactions between transcription factors and clustered DNA binding sites enable graded transcriptional responses to environmental inputs
-
Giorgetti, L., Siggers, T., Tiana, G., Caprara, G., Notarbartolo, S., Corona, T., Pasparakis, M., Milani, P., Bulyk, M.L. and Natoli, G. Noncooperative interactions between transcription factors and clustered DNA binding sites enable graded transcriptional responses to environmental inputs. Mol. Cell, 37, 418-428.
-
Mol. Cell
, vol.37
, pp. 418-428
-
-
Giorgetti, L.1
Siggers, T.2
Tiana, G.3
Caprara, G.4
Notarbartolo, S.5
Corona, T.6
Pasparakis, M.7
Milani, P.8
Bulyk, M.L.9
Natoli, G.10
-
38
-
-
77954957530
-
Stoichiometry of a regulatory splicing complex revealed by single-molecule analyses
-
Cherny, D., Gooding, C., Eperon, G.E., Coelho, M.B., Bagshaw, C.R., Smith, C.W. and Eperon, I.C. (2010) Stoichiometry of a regulatory splicing complex revealed by single-molecule analyses. EMBO J., 29, 2161-2172.
-
(2010)
EMBO J.
, vol.29
, pp. 2161-2172
-
-
Cherny, D.1
Gooding, C.2
Eperon, G.E.3
Coelho, M.B.4
Bagshaw, C.R.5
Smith, C.W.6
Eperon, I.C.7
-
39
-
-
0029064220
-
The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities
-
Tacke, R. and Manley, J.L. (1995) The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities. EMBO J., 14, 3540-3551.
-
(1995)
EMBO J.
, vol.14
, pp. 3540-3551
-
-
Tacke, R.1
Manley, J.L.2
-
40
-
-
61849139645
-
Splicing factor SFRS1 recognizes a functionally diverse landscape of RNA transcripts
-
Sanford, J.R., Wang, X., Mort, M., Vanduyn, N., Cooper, D.N., Mooney, S.D., Edenberg, H.J. and Liu, Y. (2009) Splicing factor SFRS1 recognizes a functionally diverse landscape of RNA transcripts. Genome Res., 19, 381-394.
-
(2009)
Genome Res.
, vol.19
, pp. 381-394
-
-
Sanford, J.R.1
Wang, X.2
Mort, M.3
Vanduyn, N.4
Cooper, D.N.5
Mooney, S.D.6
Edenberg, H.J.7
Liu, Y.8
-
41
-
-
0032478506
-
Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing
-
DOI 10.1016/S0092-8674(00)81153-8
-
Tacke, R., Tohyama, M., Ogawa, S. and Manley, J.L. (1998) Human Tra2 proteins are sequence-specific activators of pre-mRNA splicing. Cell, 93, 139-148. (Pubitemid 28173559)
-
(1998)
Cell
, vol.93
, Issue.1
, pp. 139-148
-
-
Tacke, R.1
Tohyama, M.2
Ogawa, S.3
Manley, J.L.4
-
42
-
-
79952324952
-
Structural basis for the dual RNA-recognition modes of human Tra2-b RRM
-
Tsuda, K., Someya, T., Kuwasako, K., Takahashi, M., He, F., Unzai, S., Inoue, M., Harada, T., Watanabe, S., Terada, T. et al. (2011) Structural basis for the dual RNA-recognition modes of human Tra2-b RRM. Nucleic Acids Res., 39, 1538-1553.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 1538-1553
-
-
Tsuda, K.1
Someya, T.2
Kuwasako, K.3
Takahashi, M.4
He, F.5
Unzai, S.6
Inoue, M.7
Harada, T.8
Watanabe, S.9
Terada, T.10
-
43
-
-
62549087007
-
Differential 30 splice site recognition of SMN1 and SMN2 transcripts by U2AF and U2 snRNP
-
Martins de Araujo, M., Bonnal, S., Hastings, M.L., Krainer, A.R. and Valcarcel, J. (2009) Differential 30 splice site recognition of SMN1 and SMN2 transcripts by U2AF and U2 snRNP. RNA, 15, 515-523.
-
(2009)
RNA
, vol.15
, pp. 515-523
-
-
Martins De Araujo, M.1
Bonnal, S.2
Hastings, M.L.3
Krainer, A.R.4
Valcarcel, J.5
-
44
-
-
29244490598
-
Determinants of exon 7 splicing in the spinal muscular atrophy genes, SMN1 and SMN2
-
DOI 10.1086/498853
-
Cartegni, L., Hastings, M.L., Calarco, J.A., de Stanchina, E. and Krainer, A.R. (2006) Determinants of exon 7 splicing in the spinal muscular atrophy genes, SMN1 and SMN2. Am. J. Hum. Genet., 78, 63-77. (Pubitemid 41833160)
-
(2006)
American Journal of Human Genetics
, vol.78
, Issue.1
, pp. 63-77
-
-
Cartegni, L.1
Hastings, M.L.2
Calarco, J.A.3
De Stanchina, E.4
Krainer, A.R.5
-
45
-
-
0036544654
-
Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1
-
Cartegni, L. and Krainer, A.R. (2002) Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1. Nat. Genet., 30, 377-384.
-
(2002)
Nat. Genet.
, vol.30
, pp. 377-384
-
-
Cartegni, L.1
Krainer, A.R.2
-
46
-
-
33745144314
-
Stimulating Full-Length SMN2 Expression by Delivering Bifunctional RNAs via a Viral Vector
-
DOI 10.1016/j.ymthe.2006.01.012, PII S1525001606000554
-
Baughan, T., Shababi, M., Coady, T.H., Dickson, A.M., Tullis, G.E. and Lorson, C.L. (2006) Stimulating full-length SMN2 expression by delivering bifunctional RNAs via a viral vector. Mol. Ther., 14, 54-62. (Pubitemid 43899482)
-
(2006)
Molecular Therapy
, vol.14
, Issue.1
, pp. 54-62
-
-
Baughan, T.1
Shababi, M.2
Coady, T.H.3
Dickson, A.M.4
Tullis, G.E.5
Lorson, C.L.6
-
47
-
-
34547128841
-
Spinal muscular atrophy: SMN2 Pre-mRNA splicing corrected by a U7 snRNA derivative carrying a splicing enhancer sequence
-
DOI 10.1038/sj.mt.6300200, PII 6300200
-
Marquis, J., Meyer, K., Angehrn, L., Kampfer, S.S., Rothen-Rutishauser, B. and Schumperli, D. (2007) Spinal muscular atrophy: SMN2 pre-mRNA splicing corrected by a U7 snRNA derivative carrying a splicing enhancer sequence. Mol. Ther., 15, 1479-1486. (Pubitemid 47099305)
-
(2007)
Molecular Therapy
, vol.15
, Issue.8
, pp. 1479-1486
-
-
Marquis, J.1
Meyer, K.2
Angehrn, L.3
Kampfer, S.S.4
Rothen-Rutishauser, B.5
Schumperli, D.6
-
48
-
-
0041665176
-
A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy
-
DOI 10.1038/ng1207
-
Kashima, T. and Manley, J.L. (2003) A negative element in SMN2 exon 7 inhibits splicing in spinal muscular atrophy. Nat. Genet., 34, 460-463. (Pubitemid 36935342)
-
(2003)
Nature Genetics
, vol.34
, Issue.4
, pp. 460-463
-
-
Kashima, T.1
Manley, J.L.2
-
49
-
-
74049115526
-
A rare SMN2 variant in a previously unrecognized composite splicing regulatory element induces exon 7 inclusion and reduces the clinical severity of spinal muscular atrophy
-
Vezain, M., Saugier-Veber, P., Goina, E., Touraine, R., Manel, V., Toutain, A., Fehrenbach, S., Frebourg, T., Pagani, F., Tosi, M. et al. (2010) A rare SMN2 variant in a previously unrecognized composite splicing regulatory element induces exon 7 inclusion and reduces the clinical severity of spinal muscular atrophy. Hum. Mutat., 31, E1110-E1125.
-
(2010)
Hum. Mutat.
, vol.31
-
-
Vezain, M.1
Saugier-Veber, P.2
Goina, E.3
Touraine, R.4
Manel, V.5
Toutain, A.6
Fehrenbach, S.7
Frebourg, T.8
Pagani, F.9
Tosi, M.10
-
50
-
-
77950524790
-
The splicing regulator Sam68 binds to a novel exonic splicing silencer and functions in SMN2 alternative splicing in spinal muscular atrophy
-
Pedrotti, S., Bielli, P., Paronetto, M.P., Ciccosanti, F., Fimia, G.M., Stamm, S., Manley, J.L. and Sette, C. (2010) The splicing regulator Sam68 binds to a novel exonic splicing silencer and functions in SMN2 alternative splicing in spinal muscular atrophy. EMBO J., 29, 1235-1247.
-
(2010)
EMBO J.
, vol.29
, pp. 1235-1247
-
-
Pedrotti, S.1
Bielli, P.2
Paronetto, M.P.3
Ciccosanti, F.4
Fimia, G.M.5
Stamm, S.6
Manley, J.L.7
Sette, C.8
-
51
-
-
0037101846
-
HnRNP-G promotes exon 7 inclusion of survival motor neuron (SMN) via direct interaction with Htra2-β1
-
Hofmann, Y. and Wirth, B. (2002) hnRNP-G promotes exon 7 inclusion of survival motor neuron (SMN) via direct interaction with Htra2-beta1. Hum. Mol. Genet., 11, 2037-2049. (Pubitemid 34919278)
-
(2002)
Human Molecular Genetics
, vol.11
, Issue.17
, pp. 2037-2049
-
-
Hofmann, Y.1
Wirth, B.2
-
52
-
-
55849144692
-
The RNA binding protein hnRNP Q modulates the utilization of exon 7 in the survival motor neuron 2 (SMN2) gene
-
Chen, H.H., Chang, J.G., Lu, R.M., Peng, T.Y. and Tarn, W.Y. (2008) The RNA binding protein hnRNP Q modulates the utilization of exon 7 in the survival motor neuron 2 (SMN2) gene. Mol. Cell. Biol., 28, 6929-6938.
-
(2008)
Mol. Cell. Biol.
, vol.28
, pp. 6929-6938
-
-
Chen, H.H.1
Chang, J.G.2
Lu, R.M.3
Peng, T.Y.4
Tarn, W.Y.5
-
53
-
-
0036501065
-
SRp30c-dependent stimulation of survival motor neuron (SMN) exon 7 inclusion is facilitated by a direct interaction with hTra2β1
-
Young, P.J., DiDonato, C.J., Hu, D., Kothary, R., Androphy, E.J. and Lorson, C.L. (2002) SRp30c-dependent stimulation of survival motor neuron (SMN) exon 7 inclusion is facilitated by a direct interaction with hTra2beta1. Hum. Mol. Genet., 11, 577-587. (Pubitemid 34257494)
-
(2002)
Human Molecular Genetics
, vol.11
, Issue.5
, pp. 577-587
-
-
Young, P.J.1
DiDonato, C.J.2
Hu, D.3
Kothary, R.4
Androphy, E.J.5
Lorson, C.L.6
-
54
-
-
3342938228
-
In vivo selection reveals combinatorial controls that define a critical exon in the spinal muscular atrophy genes
-
DOI 10.1261/rna.7580704
-
Singh, N.N., Androphy, E.J. and Singh, R.N. (2004) In vivo selection reveals combinatorial controls that define a critical exon in the spinal muscular atrophy genes. RNA, 10, 1291-1305. (Pubitemid 38989014)
-
(2004)
RNA
, vol.10
, Issue.8
, pp. 1291-1305
-
-
Singh, N.N.1
Androphy, E.J.2
Singh, R.N.3
-
55
-
-
0023088168
-
Multiple interactions between the splicing substrate and small nuclear ribonucleoproteins in spliceosomes
-
Chabot, B. and Steitz, J.A. (1987) Multiple interactions between the splicing substrate and small nuclear ribonucleoproteins in spliceosomes. Mol. Cell. Biol., 7, 281-293. (Pubitemid 17230411)
-
(1987)
Molecular and Cellular Biology
, vol.7
, Issue.1
, pp. 281-293
-
-
Chabot, B.1
Steitz, J.A.2
-
56
-
-
0025981410
-
Influences of separation and adjacent sequences on the use of alternative 5′ splice sites
-
Cunningham, S.A., Else, A.J., Potter, B. and Eperon, I.C. (1991) Influences of separation and adjacent sequences on the use of alternative 50 splice sites. J. Mol. Biol., 217, 265-281. (Pubitemid 121003939)
-
(1991)
Journal of Molecular Biology
, vol.217
, Issue.2
, pp. 265-281
-
-
Cunningham, S.A.1
Else, A.J.2
Potter, B.V.L.3
Eperon, I.C.4
-
57
-
-
77957302252
-
Pro-metastatic splicing of Ron proto-oncogene mRNA can be reversed: Therapeutic potential of bifunctional oligonucleotides and indole derivatives
-
Ghigna, C., De Toledo, M., Bonomi, S., Valacca, C., Gallo, S., Apicella, M., Eperon, I., Tazi, J. and Biamonti, G. (2010) Pro-metastatic splicing of Ron proto-oncogene mRNA can be reversed: Therapeutic potential of bifunctional oligonucleotides and indole derivatives. RNA Biol., 7, 495-503.
-
(2010)
RNA Biol.
, vol.7
, pp. 495-503
-
-
Ghigna, C.1
De Toledo, M.2
Bonomi, S.3
Valacca, C.4
Gallo, S.5
Apicella, M.6
Eperon, I.7
Tazi, J.8
Biamonti, G.9
-
58
-
-
28044455878
-
The architecture of pre-mRNAs affects mechanisms of splice-site pairing
-
DOI 10.1073/pnas.0508489102
-
Fox-Walsh, K.L., Dou, Y., Lam, B.J., Hung, S.P., Baldi, P.F. and Hertel, K.J. (2005) The architecture of pre-mRNAs affects mechanisms of splice-site pairing. Proc. Natl Acad. Sci. USA, 102, 16176-16181. (Pubitemid 41688887)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.45
, pp. 16176-16181
-
-
Fox-Walsh, K.L.1
Dou, Y.2
Lam, B.J.3
Hung, S.-P.4
Baldi, P.F.5
Hertel, K.J.6
-
59
-
-
77955894067
-
Antisense correction of SMN2 splicing in the CNS rescues necrosis in a type III SMA mouse model
-
Hua, Y., Sahashi, K., Hung, G., Rigo, F., Passini, M.A., Bennett, C.F. and Krainer, A.R. (2010) Antisense correction of SMN2 splicing in the CNS rescues necrosis in a type III SMA mouse model. Genes Dev., 24, 1634-1644.
-
(2010)
Genes Dev.
, vol.24
, pp. 1634-1644
-
-
Hua, Y.1
Sahashi, K.2
Hung, G.3
Rigo, F.4
Passini, M.A.5
Bennett, C.F.6
Krainer, A.R.7
|