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Volumn 7, Issue 1, 2007, Pages 10-14

Automated binning of microsatellite alleles: Problems and solutions

Author keywords

ABI; Allele calling; Fragment size; GENOTYPER; Genotyping error

Indexed keywords


EID: 33846005112     PISSN: 14718278     EISSN: 14718286     Source Type: Journal    
DOI: 10.1111/j.1471-8286.2006.01560.x     Document Type: Article
Times cited : (312)

References (18)
  • 2
    • 0032919210 scopus 로고    scopus 로고
    • Accurate determination of the number of CAG repeats in the Huntington disease gene using a sequence-specific internal DNA standard
    • Bruland O, Almqvist EW, Goldberg YP, Broman H, Hayden MR, Knappskog PM (1999) Accurate determination of the number of CAG repeats in the Huntington disease gene using a sequence-specific internal DNA standard. Clinical Genetics, 55, 198-202.
    • (1999) Clinical Genetics , vol.55 , pp. 198-202
    • Bruland, O.1    Almqvist, E.W.2    Goldberg, Y.P.3    Broman, H.4    Hayden, M.R.5    Knappskog, P.M.6
  • 3
    • 0037630871 scopus 로고    scopus 로고
    • Population size estimation in Yellowstone wolves with error-prone noninvasive microsatellite genotypes
    • Creel S, Spong G, Sands JL et al. (2003) Population size estimation in Yellowstone wolves with error-prone noninvasive microsatellite genotypes. Molecular Ecology, 12, 2003-2009.
    • (2003) Molecular Ecology , vol.12 , pp. 2003-2009
    • Creel, S.1    Spong, G.2    Sands, J.L.3
  • 4
    • 0038468850 scopus 로고    scopus 로고
    • Laboratory temperature variation is a previously unrecognised source of genotyping error during capillary electrophoresis
    • Davidson A, Chiba S (2003) Laboratory temperature variation is a previously unrecognised source of genotyping error during capillary electrophoresis. Molecular Ecology Notes, 3, 321-323.
    • (2003) Molecular Ecology Notes , vol.3 , pp. 321-323
    • Davidson, A.1    Chiba, S.2
  • 5
    • 0033838513 scopus 로고    scopus 로고
    • Identification and analysis of error types in high-throughput genotyping
    • Ewen KR, bahlo M, Treloar SA et al. (2000) Identification and analysis of error types in high-throughput genotyping. American Journal of Human Genetics, 67, 727-736.
    • (2000) American Journal of Human Genetics , vol.67 , pp. 727-736
    • Ewen, K.R.1    bahlo, M.2    Treloar, S.A.3
  • 6
    • 15444352074 scopus 로고    scopus 로고
    • Methods for precise sizing, automated binning of alleles, and reduction of error rates in large-scale genotyping using fluorescently labelled dinucleotide markers. FUSION (Finland-US Investigation of NIDDM Genetics) Study Group
    • Ghosh S, Karanjawala ZE, Hauser ER et al. (1997) Methods for precise sizing, automated binning of alleles, and reduction of error rates in large-scale genotyping using fluorescently labelled dinucleotide markers. FUSION (Finland-US Investigation of NIDDM Genetics) Study Group. Genome Research, 7, 165-178.
    • (1997) Genome Research , vol.7 , pp. 165-178
    • Ghosh, S.1    Karanjawala, Z.E.2    Hauser, E.R.3
  • 7
    • 0029864890 scopus 로고    scopus 로고
    • Correction of some genotyping errors in automated fluorescent microsatellite analysis by enzymatic removal of one base overhangs
    • Ginot F, Bordelais I, Nguyen S, Gyapay G (1996) Correction of some genotyping errors in automated fluorescent microsatellite analysis by enzymatic removal of one base overhangs. Nucleic Acids Research, 24, 540-541.
    • (1996) Nucleic Acids Research , vol.24 , pp. 540-541
    • Ginot, F.1    Bordelais, I.2    Nguyen, S.3    Gyapay, G.4
  • 8
    • 13444282592 scopus 로고    scopus 로고
    • Microsatellite genotyping errors: Detection approaches, common sources and consequences for paternal exclusion
    • Hoffman JI, Amos W (2005a) Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion. Molecular Ecology, 14, 599-612.
    • (2005) Molecular Ecology , vol.14 , pp. 599-612
    • Hoffman, J.I.1    Amos, W.2
  • 10
    • 0001488651 scopus 로고    scopus 로고
    • Reproducibility testing of RAPD, AFLP and SSR markers in plants by a network of European laboratories
    • Jones CJ, Edwards KJ, Castaglione S et al. (1997) Reproducibility testing of RAPD, AFLP and SSR markers in plants by a network of European laboratories. Molecular Breeding, 3, 381-390.
    • (1997) Molecular Breeding , vol.3 , pp. 381-390
    • Jones, C.J.1    Edwards, K.J.2    Castaglione, S.3
  • 12
    • 0030924047 scopus 로고    scopus 로고
    • Improved single-stranded DNA sizing accuracy in capillary electrophoresis
    • Rosenblum BB, Oaks F, Menchen S, Johnson B (1997) Improved single-stranded DNA sizing accuracy in capillary electrophoresis. Nucleic Acids Research, 25, 3925-3929.
    • (1997) Nucleic Acids Research , vol.25 , pp. 3925-3929
    • Rosenblum, B.B.1    Oaks, F.2    Menchen, S.3    Johnson, B.4
  • 13
    • 0347358913 scopus 로고    scopus 로고
    • The evolution of molecular markers-just a matter of fashion?
    • Schlotterer C (2004) The evolution of molecular markers-just a matter of fashion? Nature Reviews Genetics, 5, 63-69.
    • (2004) Nature Reviews Genetics , vol.5 , pp. 63-69
    • Schlotterer, C.1
  • 14
    • 0000874117 scopus 로고    scopus 로고
    • Biases associated with population estimation using molecular tagging
    • Waits JL, Leberg PL (2003) Biases associated with population estimation using molecular tagging. Animal Conservation, 3, 191-199.
    • (2003) Animal Conservation , vol.3 , pp. 191-199
    • Waits, J.L.1    Leberg, P.L.2
  • 15
    • 0036119258 scopus 로고    scopus 로고
    • A tale of two genotypes: Consistency between two high-throughput genotyping centres
    • Weeks DE, Conley YP, Ferrell RE, Mah TS, Gorin MB (2002) A tale of two genotypes: consistency between two high-throughput genotyping centres. Genome Research, 12, 430-435.
    • (2002) Genome Research , vol.12 , pp. 430-435
    • Weeks, D.E.1    Conley, Y.P.2    Ferrell, R.E.3    Mah, T.S.4    Gorin, M.B.5
  • 16
    • 17144449863 scopus 로고    scopus 로고
    • High-precision genotyping by denaturing capillary electrophoresis
    • Wenz HM, Robertson JM, Menchen S et al. (1998) High-precision genotyping by denaturing capillary electrophoresis. Genome Research, 8, 69-80.
    • (1998) Genome Research , vol.8 , pp. 69-80
    • Wenz, H.M.1    Robertson, J.M.2    Menchen, S.3
  • 17
    • 0344131999 scopus 로고    scopus 로고
    • Comparative semi-automated analysis of (CAG) repeats in Huntington disease gene: Use of internal standards
    • Williams LC, Hegde MR, Herrera G, Stapleton PM, Love DR (1999) Comparative semi-automated analysis of (CAG) repeats in Huntington disease gene: use of internal standards. Molecular and Cellular Probes, 13, 283-289.
    • (1999) Molecular and Cellular Probes , vol.13 , pp. 283-289
    • Williams, L.C.1    Hegde, M.R.2    Herrera, G.3    Stapleton, P.M.4    Love, D.R.5
  • 18


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.