-
1
-
-
55449123257
-
Aspartases: Molecular structure, biochemical function and biotechnological applications
-
(Polaina, J. and MacCabe, A. P., Eds.) Springer, New York)
-
Mizobata, T. and Kawata, Y. (2007) Aspartases: Molecular structure, biochemical function and biotechnological applications. In Industrial Enzymes: Structure, function and applications (Polaina, J. and MacCabe, A. P., Eds.) pp 549-565, Springer, New York.
-
(2007)
Industrial Enzymes: Structure, Function and Applications
, pp. 549-565
-
-
Mizobata, T.1
Kawata, Y.2
-
2
-
-
0035814902
-
Structural studies of duck δ1 and δ2 crystallin suggest conformational changes occur during catalysis
-
DOI 10.1021/bi002272k
-
Sampaleanu, L. M., Vallee, F., Slingsby, C., and Howell, P. L. (2001) Structural studies of duck δ1 and δ2 crystallin suggest conformational changes occur during catalysis Biochemistry 40, 2732-2742 (Pubitemid 32198275)
-
(2001)
Biochemistry
, vol.40
, Issue.9
, pp. 2732-2742
-
-
Sampaleanu, L.M.1
Vallee, F.2
Slingsby, C.3
Howell, P.L.4
-
3
-
-
34250158440
-
Substrate and Product Complexes of Escherichia coli Adenylosuccinate Lyase Provide New Insights into the Enzymatic Mechanism
-
DOI 10.1016/j.jmb.2007.04.052, PII S0022283607005451
-
Tsai, M., Koo, J., Yip, P., Colman, R. F., Segall, M. L., and Howell, P. L. (2007) Substrate and product complexes of Escherichia coli adenylosuccinate lyase provide new insights into the enzymatic mechanism J. Mol. Biol. 370, 541-554 (Pubitemid 46898432)
-
(2007)
Journal of Molecular Biology
, vol.370
, Issue.3
, pp. 541-554
-
-
Tsai, M.1
Koo, J.2
Yip, P.3
Colman, R.F.4
Segall, M.L.5
Howell, P.L.6
-
4
-
-
0030848314
-
Human argininosuccinate lyase: A structural basis for intragenic complementation
-
DOI 10.1073/pnas.94.17.9063
-
Turner, M. A., Simpson, A., McInnes, R. R., and Howell, P. L. (1997) Human argininosuccinate lyase: A structural basis for intragenic complementation Proc. Natl. Acad. Sci. U.S.A. 94, 9063-9068 (Pubitemid 27357782)
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, Issue.17
, pp. 9063-9068
-
-
Turner, M.A.1
Simpson, A.2
Mcinnes, R.R.3
Howell, P.L.4
-
5
-
-
0033596741
-
Crystal structure of an inactive duck δ II crystallin mutant with bound argininosuccinate
-
Vallee, F., Turner, M. A., Lindley, P. L., and Howell, P. L. (1999) Crystal structure of an inactive duck δ II crystallin mutant with bound argininosuccinate Biochemistry 38, 2425-2434
-
(1999)
Biochemistry
, vol.38
, pp. 2425-2434
-
-
Vallee, F.1
Turner, M.A.2
Lindley, P.L.3
Howell, P.L.4
-
6
-
-
0029078532
-
The multisubunit active site of fumarase C from Escherichia coli
-
Weaver, T. M., Levitt, D. G., Donnelly, M. I., Stevens, P. P., and Banaszak, L. J. (1995) The multisubunit active site of fumarase C from Escherichia coli Nat. Struct. Biol. 2, 654-662
-
(1995)
Nat. Struct. Biol.
, vol.2
, pp. 654-662
-
-
Weaver, T.M.1
Levitt, D.G.2
Donnelly, M.I.3
Stevens, P.P.4
Banaszak, L.J.5
-
7
-
-
4043057880
-
Crystal structure of 3-carboxy-cis,cis-muconate lactonizing enzyme from Pseudomonas putida, a fumarase class II type cycloisomerase: Enzyme evolution in parallel pathways
-
DOI 10.1021/bi036205c
-
Yang, J., Wang, Y., Woolridge, E. M., Arora, V., Petsko, G. A., Kozarich, J. W., and Ringe, D. (2004) Crystal structure of 3-carboxy-cis,cis-muconate lactonizing enzyme from Pseudomonas putida, a fumarase class II type cycloisomerase: Enzyme evolution in parallel pathways Biochemistry 43, 10424-10434 (Pubitemid 39079316)
-
(2004)
Biochemistry
, vol.43
, Issue.32
, pp. 10424-10434
-
-
Yang, J.1
Wang, Y.2
Woolridge, E.M.3
Arora, V.4
Petsko, G.A.5
Kozarich, J.W.6
Ringe, D.7
-
8
-
-
0037040187
-
Mutational analysis of duck δ2 crystallin and the structure of an inactive mutant with bound substrate provide insight into the enzymatic mechanism of argininosuccinate lyase
-
DOI 10.1074/jbc.M107465200
-
Sampaleanu, L. M., Yu, B., and Howell, P. L. (2002) Mutational analysis of duck δ2 crystallin and the structure of an inactive mutant with bound substrate provide insight into the enzymatic mechanism of argininosuccinate lyase J. Biol. Chem. 277, 4166-4175 (Pubitemid 34968678)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.6
, pp. 4166-4175
-
-
Sampaleanu, L.M.1
Yu, B.2
Lynne Howell, P.3
-
9
-
-
0033596716
-
Mutational analysis of amino acid residues involved in argininosuccinate lyase activity in duck δ II crystallin
-
Chakraborty, A. R., Davidson, A., and Howell, P. L. (1999) Mutational analysis of amino acid residues involved in argininosuccinate lyase activity in duck δ II crystallin Biochemistry 38, 2435-2443
-
(1999)
Biochemistry
, vol.38
, pp. 2435-2443
-
-
Chakraborty, A.R.1
Davidson, A.2
Howell, P.L.3
-
10
-
-
0029854921
-
Crystallographic studies of the catalytic and a second site in fumarase C from Escherichia coli
-
DOI 10.1021/bi9614702
-
Weaver, T. and Banaszak, L. (1996) Crystallographic studies of the catalytic and a second site in fumarase C from Escherichia coli Biochemistry 35, 13955-13965 (Pubitemid 26374467)
-
(1996)
Biochemistry
, vol.35
, Issue.44
, pp. 13955-13965
-
-
Weaver, T.1
Banaszak, L.2
-
11
-
-
0032527680
-
Chemical mechanism of the endogenous argininosuccinate lyase activity of duck lens δ2-crystallin
-
Wu, C. Y., Lee, H. J., Wu, S. H., Chen, S. T., Chiou, S. H., and Chang, G. G. (1998) Chemical mechanism of the endogenous argininosuccinate lyase activity of duck lens δ2-crystallin Biochem. J. 333, 327-334
-
(1998)
Biochem. J.
, vol.333
, pp. 327-334
-
-
Wu, C.Y.1
Lee, H.J.2
Wu, S.H.3
Chen, S.T.4
Chiou, S.H.5
Chang, G.G.6
-
12
-
-
0021822519
-
Purification of aspartase and aspartokinase-homoserine dehydrogenase I from Escherichia coli by dye-ligand chromatography
-
DOI 10.1016/0003-2697(85)90280-5
-
Karsten, W. E., Hunsley, J. R., and Viola, R. E. (1985) Purification of aspartase and aspartokinase-homoserine dehydrogenase I from Escherichia coli by dye-ligand chromatography Anal. Biochem. 147, 336-341 (Pubitemid 15005867)
-
(1985)
Analytical Biochemistry
, vol.147
, Issue.2
, pp. 336-341
-
-
Karsten, W.E.1
Hunsley, J.R.2
Viola, R.E.3
-
13
-
-
0033150884
-
Purification and characterization of thermostable aspartase from Bacillus sp. YM55-1
-
DOI 10.1006/abbi.1999.1186
-
Kawata, Y., Tamura, K., Yano, S., Mizobata, T., Nagai, J., Esaki, N., Soda, K., Tokushige, M., and Yumoto, N. (1999) Purification and characterization of thermostable aspartase from Bacillus sp. YM55-1 Arch. Biochem. Biophys. 366, 40-46 (Pubitemid 29394226)
-
(1999)
Archives of Biochemistry and Biophysics
, vol.366
, Issue.1
, pp. 40-46
-
-
Kawata, Y.1
Tamura, K.2
Yano, S.3
Mizobata, T.4
Nagai, J.5
Esaki, N.6
Soda, K.7
Tokushige, M.8
Yumoto, N.9
-
14
-
-
0021769539
-
Kinetic mechanism and location of rate-determining steps for aspartase from Hafnia alvei
-
Nuiry, I. I., Hermes, J. D., Weiss, P. M., Chen, C. Y., and Cook, P. F. (1984) Kinetic mechanism and location of rate-determining steps for aspartase from Hafnia alvei Biochemistry 23, 5168-5175
-
(1984)
Biochemistry
, vol.23
, pp. 5168-5175
-
-
Nuiry, I.I.1
Hermes, J.D.2
Weiss, P.M.3
Chen, C.Y.4
Cook, P.F.5
-
15
-
-
0025816503
-
Cloning, nucleotide sequence, and expression of the Bacillus subtilis ans operon, which codes for l -asparaginase and l -aspartase
-
Sun, D. X. and Setlow, P. (1991) Cloning, nucleotide sequence, and expression of the Bacillus subtilis ans operon, which codes for l -asparaginase and l -aspartase J. Bacteriol. 173, 3831-3845
-
(1991)
J. Bacteriol.
, vol.173
, pp. 3831-3845
-
-
Sun, D.X.1
Setlow, P.2
-
16
-
-
0015902723
-
Studies on aspartase. I. Purification and molecular properties of aspartase from Escherichia coli
-
Suzuki, S., Yamaguchi, J., and Tokushige, M. (1973) Studies on aspartase. I. Purification and molecular properties of aspartase from Escherichia coli Biochim. Biophys. Acta 321, 369-381
-
(1973)
Biochim. Biophys. Acta
, vol.321
, pp. 369-381
-
-
Suzuki, S.1
Yamaguchi, J.2
Tokushige, M.3
-
17
-
-
0021480799
-
Purification, crystallization, and molecular properties of aspartase from Pseudomonas fluorescens
-
Takagi, J. S., Fukunaga, R., Tokushige, M., and Katsuki, H. (1984) Purification, crystallization, and molecular properties of aspartase from Pseudomonas fluorescens J. Biochem. 96, 545-552
-
(1984)
J. Biochem.
, vol.96
, pp. 545-552
-
-
Takagi, J.S.1
Fukunaga, R.2
Tokushige, M.3
Katsuki, H.4
-
18
-
-
0029073757
-
Acid-base chemical mechanism of aspartase from Hafnia alvei
-
Yoon, M. Y., Thayer-Cook, K. A., Berdis, A. J., Karsten, W. E., Schnackerz, K. D., and Cook, P. F. (1995) Acid-base chemical mechanism of aspartase from Hafnia alvei Arch. Biochem. Biophys. 320, 115-122
-
(1995)
Arch. Biochem. Biophys.
, vol.320
, pp. 115-122
-
-
Yoon, M.Y.1
Thayer-Cook, K.A.2
Berdis, A.J.3
Karsten, W.E.4
Schnackerz, K.D.5
Cook, P.F.6
-
19
-
-
0030855248
-
The structure of L-aspartate ammonia-lyase from escherichia coli
-
DOI 10.1021/bi9704515
-
Shi, W., Dunbar, J., Jayasekera, M. M., Viola, R. E., and Farber, G. K. (1997) The structure of l -aspartate ammonia-lyase from Escherichia coli Biochemistry 36, 9136-9144 (Pubitemid 27329497)
-
(1997)
Biochemistry
, vol.36
, Issue.30
, pp. 9136-9144
-
-
Shi, W.1
Dunbar, J.2
Jayasekera, M.M.K.3
Viola, R.E.4
Farber, G.K.5
-
20
-
-
0033658180
-
L -Aspartase: New tricks from an old enzyme
-
Viola, R. E. (2000) l -Aspartase: New tricks from an old enzyme Adv. Enzymol. Relat. Areas Mol. Biol. 74, 295-341
-
(2000)
Adv. Enzymol. Relat. Areas Mol. Biol.
, vol.74
, pp. 295-341
-
-
Viola, R.E.1
-
21
-
-
0037414436
-
Crystal structure of thermostable aspartase from Bacillus sp. YM55-1: Structure-based exploration of functional sites in the aspartase family
-
DOI 10.1016/S0022-2836(03)00310-3
-
Fujii, T., Sakai, H., Kawata, Y., and Hata, Y. (2003) Crystal structure of thermostable aspartase from Bacillus sp. YM55-1: Structure-based exploration of functional sites in the aspartase family J. Mol. Biol. 328, 635-654 (Pubitemid 36438578)
-
(2003)
Journal of Molecular Biology
, vol.328
, Issue.3
, pp. 635-654
-
-
Fujii, T.1
Sakai, H.2
Kawata, Y.3
Hata, Y.4
-
22
-
-
55449102555
-
Biocatalytic enantioselective synthesis of N -substituted aspartic acids by aspartate ammonia lyase
-
Weiner, B., Poelarends, G. J., Janssen, D. B., and Feringa, B. L. (2008) Biocatalytic enantioselective synthesis of N -substituted aspartic acids by aspartate ammonia lyase Chem. - Eur. J. 14, 10094-10100
-
(2008)
Chem. - Eur. J.
, vol.14
, pp. 10094-10100
-
-
Weiner, B.1
Poelarends, G.J.2
Janssen, D.B.3
Feringa, B.L.4
-
23
-
-
65549156987
-
Site-directed mutagenesis, kinetic and inhibition studies of aspartate ammonia lyase from Bacillus sp. YM55-1
-
Puthan Veetil, V., Raj, H., Quax, W. J., Janssen, D. B., and Poelarends, G. J. (2009) Site-directed mutagenesis, kinetic and inhibition studies of aspartate ammonia lyase from Bacillus sp. YM55-1 FEBS J. 276, 2994-3007
-
(2009)
FEBS J.
, vol.276
, pp. 2994-3007
-
-
Puthan Veetil, V.1
Raj, H.2
Quax, W.J.3
Janssen, D.B.4
Poelarends, G.J.5
-
24
-
-
0034021294
-
Cloning and over-expression of thermostable Bacillus sp. YM55-1 aspartase and site-directed mutagenesis for probing a catalytic residue
-
DOI 10.1046/j.1432-1327.2000.01190.x
-
Kawata, Y., Tamura, K., Kawamura, M., Ikei, K., Mizobata, T., Nagai, J., Fujita, M., Yano, S., Tokushige, M., and Yumoto, N. (2000) Cloning and over-expression of thermostable Bacillus sp. YM55-1 aspartase and site-directed mutagenesis for probing a catalytic residue Eur. J. Biochem. 267, 1847-1857 (Pubitemid 30165540)
-
(2000)
European Journal of Biochemistry
, vol.267
, Issue.6
, pp. 1847-1857
-
-
Kawata, Y.1
Tamura, K.2
Kawamura, M.3
Ikei, K.4
Mizobata, T.5
Nagai, J.6
Fujita, M.7
Yano, S.8
Tokushige, M.9
Yumoto, N.10
-
25
-
-
0024520745
-
Site-directed mutagenesis by overlap extension using the polymerase chain reaction
-
DOI 10.1016/0378-1119(89)90358-2
-
Ho, S. N., Hunt, H. D., Horton, R. M., Pullen, J. K., and Pease, L. R. (1989) Site-directed mutagenesis by overlap extension using the polymerase chain reaction Gene 77, 51-59 (Pubitemid 19125653)
-
(1989)
Gene
, vol.77
, Issue.1
, pp. 51-59
-
-
Ho, S.N.1
Hunt, H.D.2
Horton, R.M.3
Pullen, J.K.4
Pease, L.R.5
-
26
-
-
0027879008
-
Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
-
Kabsch, W. (1993) Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants J. Appl. Crystallogr. 26, 795-800
-
(1993)
J. Appl. Crystallogr.
, vol.26
, pp. 795-800
-
-
Kabsch, W.1
-
27
-
-
33644875355
-
Scaling and assessment of data quality
-
Evans, P. (2006) Scaling and assessment of data quality Acta Crystallogr. D62, 72-82
-
(2006)
Acta Crystallogr.
, vol.62
, pp. 72-82
-
-
Evans, P.1
-
28
-
-
0000560808
-
MOLREP: An Automated Program for Molecular Replacement
-
Vagin, A. and Teplyakov, A. (1997) MOLREP: An automated program for molecular replacement J. Appl. Crystallogr. 30, 1022-1025 (Pubitemid 127485985)
-
(1997)
Journal of Applied Crystallography
, vol.30
, Issue.6
, pp. 1022-1025
-
-
Vagin, A.1
Teplyakov, A.2
-
29
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
DOI 10.1107/S0907444996012255
-
Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Refinement of macromolecular structures by the maximum-likelihood method Acta Crystallogr. D53, 240-255 (Pubitemid 27235885)
-
(1997)
Acta Crystallographica Section D: Biological Crystallography
, vol.53
, Issue.3
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
30
-
-
77949535720
-
Features and development of Coot
-
Emsley, P., Lohkamp, B., Scott, W. G., and Cowtan, K. (2010) Features and development of Coot Acta Crystallogr. D66, 486-501
-
(2010)
Acta Crystallogr.
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
31
-
-
33644874235
-
The integration of macromolecular diffraction data
-
Leslie, A. G. (2006) The integration of macromolecular diffraction data Acta Crystallogr. D62, 48-57
-
(2006)
Acta Crystallogr.
, vol.62
, pp. 48-57
-
-
Leslie, A.G.1
-
32
-
-
34547592557
-
MolProbity: All-atom contacts and structure validation for proteins and nucleic acids
-
Davis, I. W., Leaver-Fay, A., Chen, V. B., Block, J. N., Kapral, G. J., Wang, X., Murray, L. W., Arendall, W. B., III, Snoeyink, J., Richardson, J. S., and Richardson, D. C. (2007) MolProbity: All-atom contacts and structure validation for proteins and nucleic acids Nucleic Acids Res. 35, W375-W383
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Davis, I.W.1
Leaver-Fay, A.2
Chen, V.B.3
Block, J.N.4
Kapral, G.J.5
Wang, X.6
Murray, L.W.7
Arendall III, W.B.8
Snoeyink, J.9
Richardson, J.S.10
Richardson, D.C.11
-
33
-
-
13444307044
-
Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
-
DOI 10.1107/S0907444904026460
-
Krissinel, E. and Henrick, K. (2004) Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions Acta Crystallogr. D60, 2256-2268 (Pubitemid 41742778)
-
(2004)
Acta Crystallographica Section D: Biological Crystallography
, vol.60
, Issue.12
, pp. 2256-2268
-
-
Krissinel, E.1
Henrick, K.2
-
34
-
-
61649117504
-
Elucidation of the substrate specificity, kinetic and catalytic mechanism of adenylosuccinate lyase from Plasmodium falciparum
-
Bulusu, V., Srinivasan, B., Bopanna, M. P., and Balaram, H. (2009) Elucidation of the substrate specificity, kinetic and catalytic mechanism of adenylosuccinate lyase from Plasmodium falciparum Biochim. Biophys. Acta 1794, 642-654
-
(2009)
Biochim. Biophys. Acta
, vol.1794
, pp. 642-654
-
-
Bulusu, V.1
Srinivasan, B.2
Bopanna, M.P.3
Balaram, H.4
|