The structure of L-aspartate ammonia-lyase from escherichia coli

Biochemistry

Volumn 36, Issue 30, 1997, Pages 9136-9144

  Shi, Wuxian ^a   Dunbar, Jennifer ^a   Jayasekera, Maithri M K ^b   Viola, Ronald E ^b   Farber, Gregory K ^a  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

^b UNIVERSITY OF AKRON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ASPARTATE AMMONIA LYASE; BACTERIAL ENZYME;

ARTICLE; CRYSTAL STRUCTURE; ENZYME ACTIVE SITE; ENZYME STRUCTURE; ESCHERICHIA COLI; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; SITE DIRECTED MUTAGENESIS;

ASPARTATE AMMONIA-LYASE; BINDING SITES; CATALYSIS; CRYSTALLOGRAPHY, X-RAY; ELECTRONS; ESCHERICHIA COLI; MODELS, MOLECULAR; PEPTIDES; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; STRUCTURE-ACTIVITY RELATIONSHIP;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 0030855248     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi9704515     Document Type: Article

References (30)

1. Banaszak, L. J., & Weaver, T. M. (1996) Biochemistry 35, 13955-13965.
2. Beinert, H., & Kennedy, M. C. (1993) FASEB J. 7, 1442-1449.
3. Blanchard, J. S., & Cleland, W. W. (1980) Biochemistry 19, 4506-4513.
4. Brant, D. A., Barnett, L. B., & Alberty, R. A. (1963) J. Am. Chem. Soc. 85, 2204-2209.
5. Brünger, A. T. (1992) X-PLOR, Version 3.1, A System for X-ray Crystallography and NMR, Yale University Press, New Haven, CT.
6. Chiang, Y., Kresge, A. J., Pruszynski, P., Schepp, N. P., & Wirz, J. (1991) Angew. Chem., Int. Ed. Engl. 30, 1366-1368.
7. Chu, S. S. C., & Jeffrey, G. A. (1968) Acta Crystallogr. B24, 830-838.
8. Collaborative Computational Project, Number 4 (1994) Acta Crystallogr. D50, 760-763.
9. Falzone, C. J., Karsten, W. E., Conley, J. D., & Viola, R. E. (1988) Biochemistry 27, 9089-9093.
10. Gewirth, D. ( 1994) The HKL Manual, Yale University, New Haven, CT.
11. Jayasekera, M. M. K., Shi, W., Farber, G. K., & Viola, R. E. (1997) Biochemistry 36, 9145-9150.
12. Jones, T. A., Zou, J. Y., Cowan, S. W., & Kjeldgaard, M. (1991) Acta Crystallogr. A47, 110-119.
13. Kabsch, W., & Sander, C. (1983) Biopolymers 22, 2577-2637.
14. Karsten, W. E., & Viola, R. E. (1991) Arch. Biochem. Biophys. 287, 60-67.
15. Karsten, W. E., Hunsley, J. R., & Viola, R. E. (1985) Anal. Biochem. 147, 336-341.
16. Kleywegt, G. J., & Jones, T. A. (1993) CCP4 Newsletter 28, 56-59.
17. Kleywegt, G. J., & Brünger, A. T. (1996) Structure 4, 897-904.
18. Kraulis, P. J. (1991) J. Appl. Crystallogr. 24, 946-950.
19. Landro, J. A., Gerlt, J. A., Kozarich, J. W., Koo, C. W., Shah, V. J., Kenyon, G. L., Neidhart, D. J., Fujita, S., & Petsko, G. A. (1994) Biochemistry 33, 635-643.
20. Laskowski, R. A., MacArthur, M. W., Moss, D. S., & Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 238-291.
21. Matthews, B. W. (1968) J. Mol. Biol. 33, 491-497.
22. Navaza, J. (1994) Acta Crystallogr. A50, 157-163.
23. Nuiry, I. I., Hermes, J. D., Weiss, P. M., Chen, C.-Y., & Cook, P. F. (1984) Biochemistry 23, 5168-5175.
24. Porter, D. J. T., & Bright, H. J. (1980) J. Biol. Chem. 255, 4772-4780.
25. Saribas, A. S., Schindler, J. F., & Viola, R. E. (1994) J. Biol. Chem. 269, 6313-6319.
26. Shi, W., Kidd, R., Giorgianni, F., Schindler, J. F., Viola, R. E., & Farber, G. K. (1993) J. Mol. Biol. 234, 1248-1249.
27. Simpson, A., Bateman, O., Driessen, H., Lindley, P., Moss, D., Mylvaganam, S., Narebor, E., & Slingsby, C. (1994) Nat. Struct. Biol. 1, 724-734.
28. Wang B.-C. (1985) in Methods in Enzymology (Wyckoff, H. W., Hirs, C. H. W., & Timasheff, S. N., Ed.) Vol. 115, pp 90-112, Academic Press, Inc., Orlando, FL.
29. Weaver, T. M., Levitt, D. G., Donnelly, M. I., Wilkens-Stevens, P. P., & Banaszak, L. J. (1995) Nat. Struct. Biol. 2, 654-662.
30. Yoon, M.-Y., Thayer-Cook, K. A., Berdis, A. J., Karsten, W. E., Schnackerz, K. D., & Cook, P. F. (1995) Arch. Biochem. Biophys. 320, 115-122.