메뉴 건너뛰기




Volumn 12, Issue 7, 2011, Pages

Genome sequence and global sequence variation map with 5.5 million SNPs in Chinese rhesus macaque

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA;

EID: 79959912920     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2011-12-7-r63     Document Type: Article
Times cited : (35)

References (37)
  • 4
    • 0035953606 scopus 로고    scopus 로고
    • Polio vaccines exonerated.
    • 10.1038/35074222, 11323649
    • Weiss RA. Polio vaccines exonerated. Nature 2001, 410:1035-1036. 10.1038/35074222, 11323649.
    • (2001) Nature , vol.410 , pp. 1035-1036
    • Weiss, R.A.1
  • 6
    • 68949097487 scopus 로고    scopus 로고
    • Generation of transgenic monkeys with human inherited genetic disease.
    • 10.1016/j.ymeth.2009.05.007, 2752705, 19467335
    • Chan AW, Yang SH. Generation of transgenic monkeys with human inherited genetic disease. Methods 2009, 49:78-84. 10.1016/j.ymeth.2009.05.007, 2752705, 19467335.
    • (2009) Methods , vol.49 , pp. 78-84
    • Chan, A.W.1    Yang, S.H.2
  • 7
    • 44049088106 scopus 로고    scopus 로고
    • The monkey's perspective.
    • 10.1186/gb-2007-8-9-226, 2375013, 17903312
    • Disotell TR, Tosi AJ. The monkey's perspective. Genome Biol 2007, 8:226. 10.1186/gb-2007-8-9-226, 2375013, 17903312.
    • (2007) Genome Biol , vol.8 , pp. 226
    • Disotell, T.R.1    Tosi, A.J.2
  • 9
    • 0036693662 scopus 로고    scopus 로고
    • Species-specific variation in SIV disease progression between Chinese and Indian subspecies of rhesus macaque.
    • 10.1034/j.1600-0684.2002.02003.x, 12390539
    • Trichel AM, Rajakumar PA, Murphey-Corb M. Species-specific variation in SIV disease progression between Chinese and Indian subspecies of rhesus macaque. J Med Primatol 2002, 31:171-178. 10.1034/j.1600-0684.2002.02003.x, 12390539.
    • (2002) J Med Primatol , vol.31 , pp. 171-178
    • Trichel, A.M.1    Rajakumar, P.A.2    Murphey-Corb, M.3
  • 10
    • 0037178321 scopus 로고    scopus 로고
    • SIV(mac) pathogenesis in rhesus macaques of Chinese and Indian origin compared with primary HIV infections in humans.
    • 10.1097/00002030-200207260-00005, 12131186
    • Ling B, Veazey RS, Luckay A, Penedo C, Xu K, Lifson JD, Marx PA. SIV(mac) pathogenesis in rhesus macaques of Chinese and Indian origin compared with primary HIV infections in humans. Aids 2002, 16:1489-1496. 10.1097/00002030-200207260-00005, 12131186.
    • (2002) Aids , vol.16 , pp. 1489-1496
    • Ling, B.1    Veazey, R.S.2    Luckay, A.3    Penedo, C.4    Xu, K.5    Lifson, J.D.6    Marx, P.A.7
  • 11
    • 46949092589 scopus 로고    scopus 로고
    • Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta).
    • 10.1186/1471-2164-9-256, 2443142, 18510772
    • Satkoski J, Malhi RS, Kanthaswamy S, Tito RY, Malladi VS, Smith DG. Pyrosequencing as a method for SNP identification in the rhesus macaque (Macaca mulatta). BMC Genomics 2008, 9:256. 10.1186/1471-2164-9-256, 2443142, 18510772.
    • (2008) BMC Genomics , vol.9 , pp. 256
    • Satkoski, J.1    Malhi, R.S.2    Kanthaswamy, S.3    Tito, R.Y.4    Malladi, V.S.5    Smith, D.G.6
  • 14
    • 33750942708 scopus 로고    scopus 로고
    • Designing new microsatellite markers for linkage and population genetic analyses in rhesus macaques and other nonhuman primates.
    • 10.1016/j.ygeno.2006.08.009, 17010566
    • Raveendran M, Harris RA, Milosavljevic A, Johnson Z, Shelledy W, Cameron J, Rogers J. Designing new microsatellite markers for linkage and population genetic analyses in rhesus macaques and other nonhuman primates. Genomics 2006, 88:706-710. 10.1016/j.ygeno.2006.08.009, 17010566.
    • (2006) Genomics , vol.88 , pp. 706-710
    • Raveendran, M.1    Harris, R.A.2    Milosavljevic, A.3    Johnson, Z.4    Shelledy, W.5    Cameron, J.6    Rogers, J.7
  • 15
  • 16
    • 55749086861 scopus 로고    scopus 로고
    • MonkeySNP: a web portal for non-human primate single nucleotide polymorphisms.
    • 10.1093/bioinformatics/btn493, 2579713, 18796476
    • Khouangsathiene S, Pearson C, Street S, Ferguson B, Dubay C. MonkeySNP: a web portal for non-human primate single nucleotide polymorphisms. Bioinformatics 2008, 24:2645-2646. 10.1093/bioinformatics/btn493, 2579713, 18796476.
    • (2008) Bioinformatics , vol.24 , pp. 2645-2646
    • Khouangsathiene, S.1    Pearson, C.2    Street, S.3    Ferguson, B.4    Dubay, C.5
  • 17
    • 40049104732 scopus 로고    scopus 로고
    • SOAP: short oligonucleotide alignment program.
    • 10.1093/bioinformatics/btn025, 18227114
    • Li R, Li Y, Kristiansen K, Wang J. SOAP: short oligonucleotide alignment program. Bioinformatics 2008, 24:713-714. 10.1093/bioinformatics/btn025, 18227114.
    • (2008) Bioinformatics , vol.24 , pp. 713-714
    • Li, R.1    Li, Y.2    Kristiansen, K.3    Wang, J.4
  • 22
    • 72849144434 scopus 로고    scopus 로고
    • Sequencing technologies - the next generation.
    • 10.1038/nrg2626, 19997069
    • Metzker ML. Sequencing technologies - the next generation. Nat Rev Genet 2010, 11:31-46. 10.1038/nrg2626, 19997069.
    • (2010) Nat Rev Genet , vol.11 , pp. 31-46
    • Metzker, M.L.1
  • 24
    • 69749122314 scopus 로고    scopus 로고
    • Identification of deleterious mutations within three human genomes.
    • 10.1101/gr.092619.109, 2752137, 19602639
    • Chun S, Fay JC. Identification of deleterious mutations within three human genomes. Genome Res 2009, 19:1553-1561. 10.1101/gr.092619.109, 2752137, 19602639.
    • (2009) Genome Res , vol.19 , pp. 1553-1561
    • Chun, S.1    Fay, J.C.2
  • 28
    • 33846071416 scopus 로고    scopus 로고
    • PolyDoms: a whole genome database for the identification of non-synonymous coding SNPs with the potential to impact disease.
    • 10.1093/nar/gkl826, 1669724, 17142238
    • Jegga AG, Gowrisankar S, Chen J, Aronow BJ. PolyDoms: a whole genome database for the identification of non-synonymous coding SNPs with the potential to impact disease. Nucleic Acids Res 2007, 35:D700-706. 10.1093/nar/gkl826, 1669724, 17142238.
    • (2007) Nucleic Acids Res , vol.35
    • Jegga, A.G.1    Gowrisankar, S.2    Chen, J.3    Aronow, B.J.4
  • 29
    • 80052342859 scopus 로고    scopus 로고
    • CMSNP.
    • CMSNP. , http://monkey.genomics.org.cn/
  • 32
    • 33845898164 scopus 로고    scopus 로고
    • ECRbase: database of evolutionary conserved regions, promoters, and transcription factor binding sites in vertebrate genomes.
    • 10.1093/bioinformatics/btl546, 17090579
    • Loots G, Ovcharenko I. ECRbase: database of evolutionary conserved regions, promoters, and transcription factor binding sites in vertebrate genomes. Bioinformatics 2007, 23:122-124. 10.1093/bioinformatics/btl546, 17090579.
    • (2007) Bioinformatics , vol.23 , pp. 122-124
    • Loots, G.1    Ovcharenko, I.2
  • 33
    • 13444266370 scopus 로고    scopus 로고
    • Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders.
    • 539987, 15608251
    • Hamosh A, Scott AF, Amberger JS, Bocchini CA, McKusick VA. Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders. Nucleic Acids Res 2005, 33:D514-517. 539987, 15608251.
    • (2005) Nucleic Acids Res , vol.33
    • Hamosh, A.1    Scott, A.F.2    Amberger, J.S.3    Bocchini, C.A.4    McKusick, V.A.5
  • 35
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput.
    • 10.1093/nar/gkh340, 390337, 15034147
    • Edgar RC. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 2004, 32:1792-1797. 10.1093/nar/gkh340, 390337, 15034147.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 36
    • 80052345132 scopus 로고    scopus 로고
    • Gbrowse.
    • Gbrowse. , http://gmod.org/wiki/Gbrowse
  • 37
    • 84872663439 scopus 로고    scopus 로고
    • Sequence Read Archive.
    • Sequence Read Archive. , http://trace.ncbi.nlm.nih.gov/Traces/sra/sra.cgi


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.