메뉴 건너뛰기




Volumn 23, Issue 1, 2007, Pages 122-124

ECRbase: Database of evolutionary conserved regions, promoters, and transcription factor binding sites in vertebrate genomes

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR;

EID: 33845898164     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btl546     Document Type: Article
Times cited : (83)

References (16)
  • 1
    • 0037397910 scopus 로고    scopus 로고
    • Regulatory roles of conserved intergenic domains in vertebrate Dlx bigene clusters
    • Ghanem,N. et al. (2003) Regulatory roles of conserved intergenic domains in vertebrate Dlx bigene clusters. Genome Res., 13, 533-543.
    • (2003) Genome Res. , vol.13 , pp. 533-543
    • Ghanem, N.1
  • 2
    • 33644874573 scopus 로고    scopus 로고
    • The UCSC Genome Browser Database: Update 2006
    • Hinrichs,A.S. et al. (2006) The UCSC Genome Browser Database: Update 2006. Nucleic Acids Res., 34, D590-D598.
    • (2006) Nucleic Acids Res. , vol.34
    • Hinrichs, A.S.1
  • 3
    • 0141596080 scopus 로고    scopus 로고
    • The dog genome: Survey sequencing and comparative analysis
    • Kirkness,E. et al. (2003) The dog genome: Survey sequencing and comparative analysis. Science, 301, 1898-1903.
    • (2003) Science , vol.301 , pp. 1898-1903
    • Kirkness, E.1
  • 4
    • 0034616398 scopus 로고    scopus 로고
    • Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons
    • Loots,G.G. et al. (2000) Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons. Science, 288, 136-140.
    • (2000) Science , vol.288 , pp. 136-140
    • Loots, G.G.1
  • 5
    • 33644876958 scopus 로고    scopus 로고
    • TRANSFAC and its module TRANSCompel: Transcriptional gene regulation in eukaryotes
    • Matys,V. et al. (2006) TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes. Nucleic Acids Res., 34, D108-D110.
    • (2006) Nucleic Acids Res. , vol.34
    • Matys, V.1
  • 6
    • 0142084743 scopus 로고    scopus 로고
    • Scanning human gene deserts for long-range enhancers
    • Nobrega,M.A. et al. (2003) Scanning human gene deserts for long-range enhancers. Science, 302, 413.
    • (2003) Science , vol.302 , pp. 413
    • Nobrega, M.A.1
  • 7
    • 12744253685 scopus 로고    scopus 로고
    • Mulan: Multiple-sequence local alignment and visualization for studying function and evolution
    • Ovcharenko,I. et al. (2005) Mulan: Multiple-sequence local alignment and visualization for studying function and evolution. Genome Res., 15, 184-194.
    • (2005) Genome Res. , vol.15 , pp. 184-194
    • Ovcharenko, I.1
  • 8
    • 4744356096 scopus 로고    scopus 로고
    • Interpreting mammalian evolution using fugu genome comparisons
    • Ovcharenko,I. et al. (2004) Interpreting mammalian evolution using fugu genome comparisons. Genomics, 84, 890-895.
    • (2004) Genomics , vol.84 , pp. 890-895
    • Ovcharenko, I.1
  • 9
    • 0035812707 scopus 로고    scopus 로고
    • An apolipoprotein influencing triglycerides in humans and mice revealed by comparative sequencing
    • Pennacchio,L.A. et al. (2001) An apolipoprotein influencing triglycerides in humans and mice revealed by comparative sequencing. Science, 294, 169-173.
    • (2001) Science , vol.294 , pp. 169-173
    • Pennacchio, L.A.1
  • 10
    • 33745628791 scopus 로고    scopus 로고
    • Close sequence comparisons are sufficient to identify human cis-regulatory elements
    • Prabhakar,S. et al. (2006) Close sequence comparisons are sufficient to identify human cis-regulatory elements. Genome Res., 16, 855-863.
    • (2006) Genome Res. , vol.16 , pp. 855-863
    • Prabhakar, S.1
  • 11
    • 13444306641 scopus 로고    scopus 로고
    • NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
    • Pruitt,K.D. et al. (2005) NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res., 33, D501-D504.
    • (2005) Nucleic Acids Res. , vol.33
    • Pruitt, K.D.1
  • 12
    • 12244259677 scopus 로고    scopus 로고
    • Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites
    • Qin,Z.S. et al. (2003) Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites. Nat. Biotechnol., 21, 435-439.
    • (2003) Nat. Biotechnol. , vol.21 , pp. 435-439
    • Qin, Z.S.1
  • 13
    • 55449112185 scopus 로고    scopus 로고
    • Genome-wide associations of gene expression variation in humans
    • Stranger,B.E. et al. (2005) Genome-wide associations of gene expression variation in humans. PLoS Genet., 1, e78.
    • (2005) PLoS Genet. , vol.1
    • Stranger, B.E.1
  • 14
    • 33747881750 scopus 로고    scopus 로고
    • The general transcription machinery and general cofactors
    • Thomas,M.C. and Chiang,C.M. (2006) The general transcription machinery and general cofactors. Crit. Rev. Biochem. Mol. Biol., 41, 105-178.
    • (2006) Crit. Rev. Biochem. Mol. Biol. , vol.41 , pp. 105-178
    • Thomas, M.C.1    Chiang, C.M.2
  • 15
    • 1542563409 scopus 로고    scopus 로고
    • Initial sequencing and comparative analysis of the mouse genome
    • Waterston,R. et al. (2002) Initial sequencing and comparative analysis of the mouse genome. Nature, 420, 520-562.
    • (2002) Nature , vol.420 , pp. 520-562
    • Waterston, R.1
  • 16
    • 20044366725 scopus 로고    scopus 로고
    • Highly conserved non-coding sequences are associated with vertebrate development
    • Woolfe,A. et al. (2005) Highly conserved non-coding sequences are associated with vertebrate development. PLoS Biol., 3, e7.
    • (2005) PLoS Biol. , vol.3
    • Woolfe, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.