메뉴 건너뛰기




Volumn 114, Issue 2, 2011, Pages 392-400

Hypogymnia phylogeny, including Cavernularia, reveals biogeographic structure

Author keywords

Biogeography; Cavernularia; DNA sequences; GPD1; Hypogymnia; ITS; lichenized Ascomycetes; Parmeliaceae; species pair

Indexed keywords

ASCOMYCOTA; CAVERNULARIA (LICHEN); CAVERNULARIA HULTENII; CAVERNULARIA LOPHYREA; FUNGI; HYPOGYMNIA; HYPOGYMNIA KROGIAE; HYPOGYMNIA MOLLIS; PARMELIACEAE;

EID: 79959545477     PISSN: 00072745     EISSN: None     Source Type: Journal    
DOI: 10.1639/0007-2745-114.2.392     Document Type: Article
Times cited : (30)

References (37)
  • 1
    • 0038145610 scopus 로고
    • New localities for Cavernularia hultenii in eastern and western North America
    • Ahti, T. & A. Henssen. 1965. New localities for Cavernularia hultenii in eastern and western North America. The Bryologist 68: 85-89
    • (1965) The Bryologist , vol.68 , pp. 85-89
    • Ahti, T.1    Henssen, A.2
  • 2
    • 33645010969 scopus 로고    scopus 로고
    • Major clades of parmelioid lichens (Parmeliaceae, Ascomycota) and the evolution of their morphological and chemical diversity
    • Blanco, O., A. Crespo, R. H. Reeb & H. T. Lumbsch. 2006. Major clades of parmelioid lichens (Parmeliaceae, Ascomycota) and the evolution of their morphological and chemical diversity. Molecular Phylogenetics and Evolution 39: 52-69
    • (2006) Molecular Phylogenetics and Evolution , vol.39 , pp. 52-69
    • Blanco, O.1    Crespo, A.2    Reeb, R.H.3    Lumbsch, H.T.4
  • 3
    • 33747348467 scopus 로고    scopus 로고
    • Evolutionary history of vegetative reproduction in Porpidia s.l. (lichen-forming Ascomycota)
    • Buschbom, J. & D. Barker. 2006. Evolutionary history of vegetative reproduction in Porpidia s.l. (lichen-forming Ascomycota). Systematic Biology 55: 471-484
    • (2006) Systematic Biology , vol.55 , pp. 471-484
    • Buschbom, J.1    Barker, D.2
  • 4
    • 34447295941 scopus 로고    scopus 로고
    • Testing morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene
    • DOI 10.1016/j.ympev.2006.11.029, PII S1055790306004854
    • Crespo, A., H. T. Lumbsch, J.-E. Mattsson, O. Blanco, P. K. Divakar, K. Articus, E. Wiklund, P. A. Bawingan & M. Wedin. 2007. Testing morphology-based hypotheses of phylogenetic relationships in Parmeliaceae (Ascomycota) using three ribosomal markers and the nuclear RPB1 gene. Molecular Phylogenetics and Evolution 44: 812-824 (Pubitemid 47053993)
    • (2007) Molecular Phylogenetics and Evolution , vol.44 , Issue.2 , pp. 812-824
    • Crespo, A.1    Lumbsch, H.T.2    Mattsson, J.-E.3    Blanco, O.4    Divakar, P.K.5    Articus, K.6    Wiklund, E.7    Bawingan, P.A.8    Wedin, M.9
  • 8
    • 77952224963 scopus 로고    scopus 로고
    • Hypogymnia recurva and Hypogymnia wilfiana spp. nov., two new lichens from western North America
    • Goward, T., T. Ahti, J. A. Elix & T. Spribille. 2010. Hypogymnia recurva and Hypogymnia wilfiana spp. nov., two new lichens from western North America. Botany 88: 345-361
    • (2010) Botany , vol.88 , pp. 345-361
    • Goward, T.1    Ahti, T.2    Elix, J.A.3    Spribille, T.4
  • 9
    • 78751481764 scopus 로고    scopus 로고
    • Single origin and subsequent diversification of Central Andean endemic Umbilicaria species
    • Hestmark, G., J. Miadlikowska, F. Kauff, E. Fraker, K. Molnar & F. Lutzoni, F. 2011. Single origin and subsequent diversification of Central Andean endemic Umbilicaria species. Mycologia 103: 45-56
    • (2011) Mycologia , vol.103 , pp. 45-56
    • Hestmark, G.1    Miadlikowska, J.2    Kauff, F.3    Fraker, E.4    Molnar, K.5    Lutzoni, F.F.6
  • 10
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck, J. P. & F. Ronquist. 2001. MrBayes: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755. (Pubitemid 32851390)
    • (2001) Bioinformatics , vol.17 , Issue.8 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 11
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • DOI 10.1007/BF01731581
    • Kimura, M. 1980. A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16: 111-120 (Pubitemid 11166431)
    • (1980) Journal of Molecular Evolution , vol.16 , Issue.2 , pp. 111-120
    • Kimura, M.1
  • 14
    • 2342455571 scopus 로고
    • Nomenclature of Japanese taxa of Hypogymnia and Menegazzia
    • Kurokawa, S. 1971. Nomenclature of Japanese taxa of Hypogymnia and Menegazzia. Miscellanea Bryologica et Lichenologica 5: 129-130
    • (1971) Miscellanea Bryologica et Lichenologica , vol.5 , pp. 129-130
    • Kurokawa, S.1
  • 17
    • 0030311441 scopus 로고    scopus 로고
    • Testing for phylogenetic conflict among molecular datasets in the tribe Triticeae (Gramineae)
    • Mason-Gamer, R. & E. Kellogg. 1996. Testing for phylogenetic conflict among molecular datasets in the tribe Triticeae (Gramineae). Systematic Biology 45: 524-545
    • (1996) Systematic Biology , vol.45 , pp. 524-545
    • Mason-Gamer, R.1    Kellogg, E.2
  • 18
    • 0000702751 scopus 로고
    • The use of the species pair concept in lichen taxonomy
    • Mattson, J.-E. & H. T. Lumbsch. 1989. The use of the species pair concept in lichen taxonomy. Taxon 38: 238-241
    • (1989) Taxon , vol.38 , pp. 238-241
    • Mattson, J.-E.1    Lumbsch, H.T.2
  • 19
    • 33845763605 scopus 로고    scopus 로고
    • Hypogymnia
    • Pages 228-238. In T. H. Nash, III, B. D. Ryan, C. Gries & F. Bungartz (eds.) Lichens Unlimited, Tempe, Arizona
    • McCune, B. 2002. Hypogymnia. Pages 228-238. In T. H. Nash, III, B. D. Ryan, C. Gries & F. Bungartz (eds.), Lichen Flora of the Greater Sonoran Desert Region. Lichens Unlimited, Tempe, Arizona
    • (2002) Lichen Flora of the Greater Sonoran Desert Region
    • McCune, B.1
  • 20
    • 0142060802 scopus 로고    scopus 로고
    • Five New Species of Hypogymnia with Rimmed Holes from the Chinese Himalayas
    • -, E. Martin & L. S. Wang. 2002. Five new species of Hypogymnia with rimmed holes, from the Chinese Himalayas. The Bryologist 106: 226-234 (Pubitemid 37283692)
    • (2003) Bryologist , vol.106 , Issue.2 , pp. 226-234
    • McCune, B.1    Martin, E.P.2    Wang, L.-S.3
  • 21
    • 61849155712 scopus 로고    scopus 로고
    • Hypogymnia minilobata (Parmeliaceae), a new lichen from coastal California
    • - & C. Schoch. 2009. Hypogymnia minilobata (Parmeliaceae), a new lichen from coastal California. The Bryologist 112: 94-100
    • (2009) The Bryologist , vol.112 , pp. 94-100
    • McCune, B.1    Martin, E.2    Wang, L.S.3    Schoch, C.4
  • 22
  • 23
    • 0242508906 scopus 로고    scopus 로고
    • New genes for phylogenetic studies of lichenized fungi: Glyceraldehyde-3-phosphate dehydrogenase and beta-tubulin genes
    • DOI 10.1006/lich.2002.0390
    • Myllys, L., S. Stenroos & A. Thell. 2002. New genes for phylogenetic studies of lichenized fungi: glyceraldehyde-3- phosphate dehydrogenase and beta-tubulin genes. Lichenologist 34: 237-246 (Pubitemid 38271962)
    • (2002) Lichenologist , vol.34 , Issue.3 , pp. 237-246
    • Myllys, L.1    Stenroos, S.2    Thell, A.3
  • 24
    • 39149141072 scopus 로고    scopus 로고
    • AWTY (are we there yet?): A system for graphical exploration of MCMC convergence in Bayesian phylogenetics
    • DOI 10.1093/bioinformatics/btm388
    • Nylander, J. A. A., J. C. Wilgenbusch, D. L. Warren & D. L. Swofford. 2008. AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 24: 581-583 (Pubitemid 351256305)
    • (2008) Bioinformatics , vol.24 , Issue.4 , pp. 581-583
    • Nylander, J.A.A.1    Wilgenbusch, J.C.2    Warren, D.L.3    Swofford, D.L.4
  • 26
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: Testing the model of DNA substitution
    • Posada, D. & K. A. Crandall. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14: 817-818 (Pubitemid 28552116)
    • (1998) Bioinformatics , vol.14 , Issue.9 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 27
    • 85010112756 scopus 로고    scopus 로고
    • Genetic variability and its geographical distribution in the widely disjunct Cavernularia hultenii
    • Printzen, C. & S. Ekman. 2002. Genetic variability and its geographical distribution in the widely disjunct Cavernularia hultenii. Lichenologist 34: 101-111.
    • (2002) Lichenologist , vol.34 , pp. 101-111
    • Printzen, C.1    Ekman, S.2
  • 28
    • 0038717231 scopus 로고    scopus 로고
    • Phylogeography of Cavernularia hultenii: Evidence of slow genetic drift in a widely disjunct lichen
    • Printzen, C., S. Ekman & T. Tønsberg. 2003. Phylogeography of Cavernularia hultenii: evidence of slow genetic drift in a widely disjunct lichen. Molecular Ecology 12: 1473-1486
    • (2003) Molecular Ecology , vol.12 , pp. 1473-1486
    • Printzen, C.1    Ekman, S.2    Tønsberg, T.3
  • 30
    • 3843090640 scopus 로고    scopus 로고
    • Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory
    • DOI 10.1016/j.ympev.2004.04.012, PII S105579030400140X
    • Reeb, V., F. Lutzoni & C. Roux. 2004. Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory. Molecular Phylogenetics and Evolution 32: 1036-1060 (Pubitemid 39033555)
    • (2004) Molecular Phylogenetics and Evolution , vol.32 , Issue.3 , pp. 1036-1060
    • Reeb, V.1    Lutzoni, F.2    Roux, C.3
  • 33
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • DOI 10.1093/bioinformatics/btl446
    • -. 2006b. Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690 (Pubitemid 44642609)
    • (2006) Bioinformatics , vol.22 , Issue.21 , pp. 2688-2690
    • Stamatakis, A.1
  • 34
    • 20444408975 scopus 로고    scopus 로고
    • Monophyletic groups within the Parmeliaceae identified by ITS rDNA, b-tubulin and GAPDH sequences
    • Thell, A., T. Feuerer, I. Kärnefelt, L. Myllys & S. Stenroos. 2004. Monophyletic groups within the Parmeliaceae identified by ITS rDNA, b-tubulin and GAPDH sequences. Mycological Progress 3: 297-314
    • (2004) Mycological Progress , vol.3 , pp. 297-314
    • Thell, A.1    Feuerer, T.2    Kärnefelt, I.3    Myllys, L.4    Stenroos, S.5
  • 35
    • 0002057976 scopus 로고
    • The sorediate and isidiate, corticolous, crustose lichens in Norway
    • Tønsberg, T. 1992. The sorediate and isidiate, corticolous, crustose lichens in Norway. Sommerfeltia 14: 1-331
    • (1992) Sommerfeltia , vol.14 , pp. 1-331
    • Tønsberg, T.1
  • 36
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal DNA genes for phylogenetics. Pages 315-322
    • M. A. Innis, D. H., J. J. Sninsky & T. J. White (eds.) Academic Press, San Diego, California
    • White, T. J., T. Bruns, S. H. Lee & J. Taylor. 1990. Amplification and direct sequencing of fungal ribosomal DNA genes for phylogenetics. Pages 315-322. In M. A. Innis, D. H., J. J. Sninsky & T. J. White (eds.), PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego, California
    • (1990) PCR Protocols: A Guide to Methods and Applications
    • White, T.J.1    Bruns, T.2    Lee, S.H.3    Taylor, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.