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more..
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15
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79957836791
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Flexible structural alignment was carried out using the program Surflex Sim provided with SYBYL-X 1.2 (Tripos Int., St. Louis, MO, USA)
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(a) Flexible structural alignment was carried out using the program Surflex Sim provided with SYBYL-X 1.2 (Tripos Int., St. Louis, MO, USA).;
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17
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5544242529
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Structures were optimized prior to alignment using the MMFF94s force field, supplied with SYBYL-X 1.2, see (c)
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Structures were optimized prior to alignment using the MMFF94s force field, supplied with SYBYL-X 1.2, see (c) Halgren, T. J. Comp. Chem. 1999, 20, 720.
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(1999)
J. Comp. Chem.
, vol.20
, pp. 720
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Halgren, T.1
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18
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84870649266
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Rutgers University, New Brunswick, NJ with reference code 1EZF
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Protein Data Bank, Research Collaboratory for Structural Bioinformatics, Rutgers University, New Brunswick, NJ (http://www.rcsb.org) with reference code 1EZF.
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Protein Data Bank
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19
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0034730724
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See
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See: Pandit, J.; Danley, D. E.; Schulte, G. K.; Mazzalupo, S. J. Biol. Chem. 2000, 275, 30610.
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Pandit, J.1
Danley, D.E.2
Schulte, G.K.3
Mazzalupo, S.4
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20
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79957818529
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note
-
Docking studies were carried out employing the Schrödinger suite of programs. The X-ray crystal structure 1EZF was used as a glide receptor grid after protein preparation. The water forming a bridge to ASN 215 was included into the receptor grid. Ligands were optimized before docking via the ligprep routine. Docking was carried out in SP and XP mode with similar results. Figures were prepared with PyMol.;
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21
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84864167487
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version 5.6, Schrödinger, LLC, New York, NY
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(b) Glide, version 5.6, Schrödinger, LLC, New York, NY, 2010.;
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(2010)
Glide
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22
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84864171272
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version 2.4, Schrödinger, LLC, New York, NY
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(c) LigPrep, version 2.4, Schrödinger, LLC, New York, NY, 2010.;
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(2010)
LigPrep
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24
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20444481767
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(a) Moore, J. E.; Davies, M. W.; Goodenough, K. M.; Wybrow, R. A. J.; York, M.; Johnson, C. N.; Harrity, J. P. A. Tetrahedron 2005, 61, 6707;
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(2005)
Tetrahedron
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, pp. 6707
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Moore, J.E.1
Davies, M.W.2
Goodenough, K.M.3
Wybrow, R.A.J.4
York, M.5
Johnson, C.N.6
Harrity, J.P.A.7
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25
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0036458491
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(b) Moore, J. E.; Goodenough, K. M.; Spinks, D.; Harrity, J. P. A. Synlett 2002, 2071.
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(2002)
Synlett
, pp. 2071
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Moore, J.E.1
Goodenough, K.M.2
Spinks, D.3
Harrity, J.P.A.4
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26
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79957871255
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For experimental details and characterization of the compounds see: (a) PCT Int. Appl., WO 2008003424
-
For experimental details and characterization of the compounds see: (a) Griebenow, N.; Buchmueller, A.; Kolkhof, P.; Bischoff, H. PCT Int. Appl., WO 2008003424, 2008.
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(2008)
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Griebenow, N.1
Buchmueller, A.2
Kolkhof, P.3
Bischoff, H.4
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28
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79957858860
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note
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The geometry of the isoxazole 1 was reasoned from the subsequent synthesis steps providing the 4,1-benzoxazepine scaffold. The regioisomeric 3-(dimethoxymethyl)-4-isopropyl-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl) -1,2-oxazole will not yield such a cyclization pruduct.
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29
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36749014055
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Generation of nitrile oxides from N-hydroxyimidoyl chlorides by slow addition of triethylamine, where the stationary concentration of nitrile oxide is kept low to avoid dimerization
-
Generation of nitrile oxides from N-hydroxyimidoyl chlorides by slow addition of triethylamine, where the stationary concentration of nitrile oxide is kept low to avoid dimerization: Huisgen, R. Angew. Chem., Int. Ed. 1963, 2, 565.
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(1963)
Angew. Chem., Int. Ed.
, vol.2
, pp. 565
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Huisgen, R.1
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30
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79957863429
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note
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Yields were low due to dimerization of the formed nitrile oxide and protodeborylation of the product.
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31
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76949099671
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For comprehensive reviews, see: (a)
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For comprehensive reviews, see: (a) Suzuki, A. Pure Appl. Chem. 1994, 66, 213;
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Suzuki, A.1
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7644241634
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(c) Bellina, F.; Carpita, A.; Rossi, R. Synthesis 2004, 15, 2419.
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(2004)
Synthesis
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, pp. 2419
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Bellina, F.1
Carpita, A.2
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35
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84985611368
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Schwesinger, R.; Schlemper, H. Angew. Chem., Int. Ed. 1987, 26, 1167.
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, vol.26
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Schwesinger, R.1
Schlemper, H.2
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36
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79957878786
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note
-
3H]-farnesyl pyrophosphate and incubated for 10 min at 37 °C. Subsequently, 100 μl solution was extracted with 200 μl chloroform, 200 μl methanol and 60 μl 5 N sodium hydroxide and adjusted to 2 mM squalene. An aliquot of the organic phase was mixed with scintillation fluid and measured for β-emission.
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37
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79953288885
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Griebenow, N.; Flessner, T.; Buchmueller, A.; Raabe, M.; Bischoff, H.; Kolkhof, P. Bioorg. Med. Chem. Lett. 2011, 21, 2554.
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Bioorg. Med. Chem. Lett.
, vol.21
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Griebenow, N.1
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Bischoff, H.5
Kolkhof, P.6
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38
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0018379640
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14C]- cholesterol synthesis was determined after sterol extraction by liquid scintillation counting. See also
-
14C]- cholesterol synthesis was determined after sterol extraction by liquid scintillation counting. See also: Duncan, I. W.; Culbreth, P. H.; Burtis, C. A. J. Chromatogr. 1979, 162, 281.
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Duncan, I.W.1
Culbreth, P.H.2
Burtis, C.A.3
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39
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79957830114
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note
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+.
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-
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40
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79957858401
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note
-
Intrument: Micromass Quattro LCZ with HPLC Agilent Series 1100; column: Phenomenex Synergi 2 μ Hydro-RP Mercury, 20 x 4 mm; eluent A: 1 l water + 0.5 ml 50% formic acid; eluent B: 1 l acetonirile + 0.5 ml 50% formic acid; gradient: 0.0 min 90% A→2.5 min 30% A→3.0 min 5% A→4.5 min 5% A; flow rate: 0.0 min 1 ml/min→2.5 min/3.0 min/4.5 min 2 ml/min; oven: 50 °C; UV detection: 208-400 nm.
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