-
1
-
-
38549150275
-
MiRBase: tools for microRNA genomics
-
2238936, 17991681
-
Griffiths-Jones S, Saini HK, van Dongen S, Enright AJ. miRBase: tools for microRNA genomics. Nucleic Acids Res 2008, 36(36 Database):D154-158. 2238936, 17991681.
-
(2008)
Nucleic Acids Res
, vol.36
, Issue.36
-
-
Griffiths-Jones, S.1
Saini, H.K.2
van Dongen, S.3
Enright, A.J.4
-
2
-
-
55849135596
-
MicroRNA-directed transcriptional gene silencing in mammalian cells
-
10.1073/pnas.0808830105, 2571020, 18852463
-
Kim DH, Saetrom P, Snove O, Rossi JJ. MicroRNA-directed transcriptional gene silencing in mammalian cells. Proc Natl Acad Sci USA 2008, 105(42):16230-16235. 10.1073/pnas.0808830105, 2571020, 18852463.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, Issue.42
, pp. 16230-16235
-
-
Kim, D.H.1
Saetrom, P.2
Snove, O.3
Rossi, J.J.4
-
3
-
-
8144225486
-
MicroRNA genes are transcribed by RNA polymerase II
-
10.1038/sj.emboj.7600385, 524334, 15372072
-
Lee Y, Kim M, Han J, Yeom KH, Lee S, Baek SH, Kim VN. MicroRNA genes are transcribed by RNA polymerase II. Embo J 2004, 23(20):4051-4060. 10.1038/sj.emboj.7600385, 524334, 15372072.
-
(2004)
Embo J
, vol.23
, Issue.20
, pp. 4051-4060
-
-
Lee, Y.1
Kim, M.2
Han, J.3
Yeom, K.H.4
Lee, S.5
Baek, S.H.6
Kim, V.N.7
-
4
-
-
9344235449
-
Human microRNAs are processed from capped, polyadenylated transcripts that can also function as mRNAs
-
10.1261/rna.7135204, 1370684, 15525708
-
Cai X, Hagedorn CH, Cullen BR. Human microRNAs are processed from capped, polyadenylated transcripts that can also function as mRNAs. Rna 2004, 10(12):1957-1966. 10.1261/rna.7135204, 1370684, 15525708.
-
(2004)
Rna
, vol.10
, Issue.12
, pp. 1957-1966
-
-
Cai, X.1
Hagedorn, C.H.2
Cullen, B.R.3
-
5
-
-
4644227434
-
Trans-splicing and polyadenylation of let-7 microRNA primary transcripts
-
10.1261/rna.7122604, 1370645, 15337850
-
Bracht J, Hunter S, Eachus R, Weeks P, Pasquinelli AE. Trans-splicing and polyadenylation of let-7 microRNA primary transcripts. Rna 2004, 10(10):1586-1594. 10.1261/rna.7122604, 1370645, 15337850.
-
(2004)
Rna
, vol.10
, Issue.10
, pp. 1586-1594
-
-
Bracht, J.1
Hunter, S.2
Eachus, R.3
Weeks, P.4
Pasquinelli, A.E.5
-
6
-
-
23644450595
-
Characterization of a highly variable eutherian microRNA gene
-
10.1261/rna.2890305, 1370808, 15987809
-
Houbaviy HB, Dennis L, Jaenisch R, Sharp PA. Characterization of a highly variable eutherian microRNA gene. Rna 2005, 11(8):1245-1257. 10.1261/rna.2890305, 1370808, 15987809.
-
(2005)
Rna
, vol.11
, Issue.8
, pp. 1245-1257
-
-
Houbaviy, H.B.1
Dennis, L.2
Jaenisch, R.3
Sharp, P.A.4
-
7
-
-
34249817549
-
Transactivation of miR-34a by p53 broadly influences gene expression and promotes apoptosis
-
10.1016/j.molcel.2007.05.010, 1939978, 17540599
-
Chang TC, Wentzel EA, Kent OA, Ramachandran K, Mullendore M, Lee KH, Feldmann G, Yamakuchi M, Ferlito M, Lowenstein CJ, et al. Transactivation of miR-34a by p53 broadly influences gene expression and promotes apoptosis. Mol Cell 2007, 26(5):745-752. 10.1016/j.molcel.2007.05.010, 1939978, 17540599.
-
(2007)
Mol Cell
, vol.26
, Issue.5
, pp. 745-752
-
-
Chang, T.C.1
Wentzel, E.A.2
Kent, O.A.3
Ramachandran, K.4
Mullendore, M.5
Lee, K.H.6
Feldmann, G.7
Yamakuchi, M.8
Ferlito, M.9
Lowenstein, C.J.10
-
8
-
-
34047264639
-
Direct regulation of an oncogenic micro-RNA cluster by E2F transcription factors
-
Woods K, Thomson JM, Hammond SM. Direct regulation of an oncogenic micro-RNA cluster by E2F transcription factors. J Biol Chem 2007, 282(4):2130-2134.
-
(2007)
J Biol Chem
, vol.282
, Issue.4
, pp. 2130-2134
-
-
Woods, K.1
Thomson, J.M.2
Hammond, S.M.3
-
9
-
-
33749543840
-
Primary transcripts and expressions of mammal intergenic microRNAs detected by mapping ESTs to their flanking sequences
-
10.1007/s00335-006-0007-9, 17019647
-
Gu J, He T, Pei Y, Li F, Wang X, Zhang J, Zhang X, Li Y. Primary transcripts and expressions of mammal intergenic microRNAs detected by mapping ESTs to their flanking sequences. Mamm Genome 2006, 17(10):1033-1041. 10.1007/s00335-006-0007-9, 17019647.
-
(2006)
Mamm Genome
, vol.17
, Issue.10
, pp. 1033-1041
-
-
Gu, J.1
He, T.2
Pei, Y.3
Li, F.4
Wang, X.5
Zhang, J.6
Zhang, X.7
Li, Y.8
-
10
-
-
56549129538
-
Chromatin structure analyses identify miRNA promoters
-
10.1101/gad.1706508, 2593607, 19056895
-
Ozsolak F, Poling LL, Wang Z, Liu H, Liu XS, Roeder RG, Zhang X, Song JS, Fisher DE. Chromatin structure analyses identify miRNA promoters. Genes Dev 2008, 22(22):3172-3183. 10.1101/gad.1706508, 2593607, 19056895.
-
(2008)
Genes Dev
, vol.22
, Issue.22
, pp. 3172-3183
-
-
Ozsolak, F.1
Poling, L.L.2
Wang, Z.3
Liu, H.4
Liu, X.S.5
Roeder, R.G.6
Zhang, X.7
Song, J.S.8
Fisher, D.E.9
-
11
-
-
44649141308
-
MicroRNA-encoding long non-coding RNAs
-
10.1186/1471-2164-9-236, 2410135, 18492288
-
He S, Su H, Liu C, Skogerbo G, He H, He D, Zhu X, Liu T, Zhao Y, Chen R. MicroRNA-encoding long non-coding RNAs. BMC Genomics 2008, 9:236. 10.1186/1471-2164-9-236, 2410135, 18492288.
-
(2008)
BMC Genomics
, vol.9
, pp. 236
-
-
He, S.1
Su, H.2
Liu, C.3
Skogerbo, G.4
He, H.5
He, D.6
Zhu, X.7
Liu, T.8
Zhao, Y.9
Chen, R.10
-
12
-
-
36749026287
-
Genomic analysis of human microRNA transcripts
-
10.1073/pnas.0703890104, 2077053, 17965236
-
Saini HK, Griffiths-Jones S, Enright AJ. Genomic analysis of human microRNA transcripts. Proc Natl Acad Sci USA 2007, 104(45):17719-17724. 10.1073/pnas.0703890104, 2077053, 17965236.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.45
, pp. 17719-17724
-
-
Saini, H.K.1
Griffiths-Jones, S.2
Enright, A.J.3
-
13
-
-
34047234690
-
Characterization and identification of microRNA core promoters in four model species
-
10.1371/journal.pcbi.0030037, 1817659, 17352530
-
Zhou X, Ruan J, Wang G, Zhang W. Characterization and identification of microRNA core promoters in four model species. PLoS Comput Biol 2007, 3(3):e37. 10.1371/journal.pcbi.0030037, 1817659, 17352530.
-
(2007)
PLoS Comput Biol
, vol.3
, Issue.3
-
-
Zhou, X.1
Ruan, J.2
Wang, G.3
Zhang, W.4
-
14
-
-
60849112259
-
Annotation of Mammalian Primary microRNAs
-
10.1186/1471-2164-9-564, 2632650, 19038026
-
Saini HK, Enright AJ, Griffiths-Jones S. Annotation of Mammalian Primary microRNAs. BMC Genomics 2008, 9(1):564. 10.1186/1471-2164-9-564, 2632650, 19038026.
-
(2008)
BMC Genomics
, vol.9
, Issue.1
, pp. 564
-
-
Saini, H.K.1
Enright, A.J.2
Griffiths-Jones, S.3
-
15
-
-
60749093749
-
High-resolution human core-promoter prediction with CoreBoost_HM
-
Wang X, Xuan Z, Zhao X, Li Y, Zhang MQ. High-resolution human core-promoter prediction with CoreBoost_HM. Genome Res 2008,
-
(2008)
Genome Res
-
-
Wang, X.1
Xuan, Z.2
Zhao, X.3
Li, Y.4
Zhang, M.Q.5
-
16
-
-
52449115337
-
MicroRNAs in development and disease
-
10.1111/j.1399-0004.2008.01076.x, 18713256
-
Erson AE, Petty EM. MicroRNAs in development and disease. Clin Genet 2008, 74(4):296-306. 10.1111/j.1399-0004.2008.01076.x, 18713256.
-
(2008)
Clin Genet
, vol.74
, Issue.4
, pp. 296-306
-
-
Erson, A.E.1
Petty, E.M.2
-
17
-
-
34248153777
-
Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates
-
10.1101/gr.6086307, 1855176, 17387144
-
Kikuta H, Laplante M, Navratilova P, Komisarczuk AZ, Engstrom PG, Fredman D, Akalin A, Caccamo M, Sealy I, Howe K, et al. Genomic regulatory blocks encompass multiple neighboring genes and maintain conserved synteny in vertebrates. Genome Res 2007, 17(5):545-555. 10.1101/gr.6086307, 1855176, 17387144.
-
(2007)
Genome Res
, vol.17
, Issue.5
, pp. 545-555
-
-
Kikuta, H.1
Laplante, M.2
Navratilova, P.3
Komisarczuk, A.Z.4
Engstrom, P.G.5
Fredman, D.6
Akalin, A.7
Caccamo, M.8
Sealy, I.9
Howe, K.10
-
18
-
-
23744502709
-
A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts
-
10.1101/gr.4004805, 1182218, 16024824
-
de la Calle-Mustienes E, Feijoo CG, Manzanares M, Tena JJ, Rodriguez-Seguel E, Letizia A, Allende ML, Gomez-Skarmeta JL. A functional survey of the enhancer activity of conserved non-coding sequences from vertebrate Iroquois cluster gene deserts. Genome Res 2005, 15(8):1061-1072. 10.1101/gr.4004805, 1182218, 16024824.
-
(2005)
Genome Res
, vol.15
, Issue.8
, pp. 1061-1072
-
-
de la Calle-Mustienes, E.1
Feijoo, C.G.2
Manzanares, M.3
Tena, J.J.4
Rodriguez-Seguel, E.5
Letizia, A.6
Allende, M.L.7
Gomez-Skarmeta, J.L.8
-
19
-
-
22244474640
-
Genomic deletion of a long-range bone enhancer misregulates sclerostin in Van Buchem disease
-
10.1101/gr.3437105, 1172036, 15965026
-
Loots GG, Kneissel M, Keller H, Baptist M, Chang J, Collette NM, Ovcharenko D, Plajzer-Frick I, Rubin EM. Genomic deletion of a long-range bone enhancer misregulates sclerostin in Van Buchem disease. Genome Res 2005, 15(7):928-935. 10.1101/gr.3437105, 1172036, 15965026.
-
(2005)
Genome Res
, vol.15
, Issue.7
, pp. 928-935
-
-
Loots, G.G.1
Kneissel, M.2
Keller, H.3
Baptist, M.4
Chang, J.5
Collette, N.M.6
Ovcharenko, D.7
Plajzer-Frick, I.8
Rubin, E.M.9
-
20
-
-
20044366725
-
Highly conserved non-coding sequences are associated with vertebrate development
-
10.1371/journal.pbio.0030007, 526512, 15630479
-
Woolfe A, Goodson M, Goode DK, Snell P, McEwen GK, Vavouri T, Smith SF, North P, Callaway H, Kelly K, et al. Highly conserved non-coding sequences are associated with vertebrate development. PLoS Biol 2005, 3(1):e7. 10.1371/journal.pbio.0030007, 526512, 15630479.
-
(2005)
PLoS Biol
, vol.3
, Issue.1
-
-
Woolfe, A.1
Goodson, M.2
Goode, D.K.3
Snell, P.4
McEwen, G.K.5
Vavouri, T.6
Smith, S.F.7
North, P.8
Callaway, H.9
Kelly, K.10
-
21
-
-
33645073400
-
A functional screen for sonic hedgehog regulatory elements across a 1 Mb interval identifies long-range ventral forebrain enhancers
-
10.1242/dev.02239, 16407397
-
Jeong Y, El-Jaick K, Roessler E, Muenke M, Epstein DJ. A functional screen for sonic hedgehog regulatory elements across a 1 Mb interval identifies long-range ventral forebrain enhancers. Development 2006, 133(4):761-772. 10.1242/dev.02239, 16407397.
-
(2006)
Development
, vol.133
, Issue.4
, pp. 761-772
-
-
Jeong, Y.1
El-Jaick, K.2
Roessler, E.3
Muenke, M.4
Epstein, D.J.5
-
22
-
-
22144473057
-
Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes
-
10.1186/1471-2164-5-99, 544600, 15613238
-
Sandelin A, Bailey P, Bruce S, Engstrom PG, Klos JM, Wasserman WW, Ericson J, Lenhard B. Arrays of ultraconserved non-coding regions span the loci of key developmental genes in vertebrate genomes. BMC Genomics 2004, 5(1):99. 10.1186/1471-2164-5-99, 544600, 15613238.
-
(2004)
BMC Genomics
, vol.5
, Issue.1
, pp. 99
-
-
Sandelin, A.1
Bailey, P.2
Bruce, S.3
Engstrom, P.G.4
Klos, J.M.5
Wasserman, W.W.6
Ericson, J.7
Lenhard, B.8
-
23
-
-
33751316959
-
In vivo enhancer analysis of human conserved non-coding sequences
-
10.1038/nature05295, 17086198
-
Pennacchio LA, Ahituv N, Moses AM, Prabhakar S, Nobrega MA, Shoukry M, Minovitsky S, Dubchak I, Holt A, Lewis KD, et al. In vivo enhancer analysis of human conserved non-coding sequences. Nature 2006, 444(7118):499-502. 10.1038/nature05295, 17086198.
-
(2006)
Nature
, vol.444
, Issue.7118
, pp. 499-502
-
-
Pennacchio, L.A.1
Ahituv, N.2
Moses, A.M.3
Prabhakar, S.4
Nobrega, M.A.5
Shoukry, M.6
Minovitsky, S.7
Dubchak, I.8
Holt, A.9
Lewis, K.D.10
-
24
-
-
72649101692
-
A systematic approach to identify functional motifs within vertebrate developmental enhancers
-
10.1016/j.ydbio.2009.10.019, 19850031
-
Li Q, Ritter D, Yang N, Dong Z, Li H, Chuang JH, Guo S. A systematic approach to identify functional motifs within vertebrate developmental enhancers. Dev Biol 2010, 337(2):484-495. 10.1016/j.ydbio.2009.10.019, 19850031.
-
(2010)
Dev Biol
, vol.337
, Issue.2
, pp. 484-495
-
-
Li, Q.1
Ritter, D.2
Yang, N.3
Dong, Z.4
Li, H.5
Chuang, J.H.6
Guo, S.7
-
25
-
-
65149092197
-
Transcriptional features of genomic regulatory blocks
-
10.1186/gb-2009-10-4-r38, 2688929, 19374772
-
Akalin A, Fredman D, Arner E, Dong X, Bryne JC, Suzuki H, Daub CO, Hayashizaki Y, Lenhard B. Transcriptional features of genomic regulatory blocks. Genome Biol 2009, 10(4):R38. 10.1186/gb-2009-10-4-r38, 2688929, 19374772.
-
(2009)
Genome Biol
, vol.10
, Issue.4
-
-
Akalin, A.1
Fredman, D.2
Arner, E.3
Dong, X.4
Bryne, J.C.5
Suzuki, H.6
Daub, C.O.7
Hayashizaki, Y.8
Lenhard, B.9
-
26
-
-
34248358308
-
Hyperconserved CpG domains underlie Polycomb-binding sites
-
10.1073/pnas.0609746104, 1838490, 17376869
-
Tanay A, O'Donnell AH, Damelin M, Bestor TH. Hyperconserved CpG domains underlie Polycomb-binding sites. Proc Natl Acad Sci USA 2007, 104(13):5521-5526. 10.1073/pnas.0609746104, 1838490, 17376869.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, Issue.13
, pp. 5521-5526
-
-
Tanay, A.1
O'Donnell, A.H.2
Damelin, M.3
Bestor, T.H.4
-
27
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
10.1016/j.cell.2006.02.041, 16630819
-
Bernstein BE, Mikkelsen TS, Xie X, Kamal M, Huebert DJ, Cuff J, Fry B, Meissner A, Wernig M, Plath K, et al. A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 2006, 125(2):315-326. 10.1016/j.cell.2006.02.041, 16630819.
-
(2006)
Cell
, vol.125
, Issue.2
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.3
Kamal, M.4
Huebert, D.J.5
Cuff, J.6
Fry, B.7
Meissner, A.8
Wernig, M.9
Plath, K.10
-
28
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
10.1038/nature06008, 2921165, 17603471
-
Mikkelsen TS, Ku M, Jaffe DB, Issac B, Lieberman E, Giannoukos G, Alvarez P, Brockman W, Kim TK, Koche RP, et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 2007, 448(7153):553-560. 10.1038/nature06008, 2921165, 17603471.
-
(2007)
Nature
, vol.448
, Issue.7153
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.K.9
Koche, R.P.10
-
29
-
-
43549106605
-
Ancora: a web resource for exploring highly conserved noncoding elements and their association with developmental regulatory genes
-
10.1186/gb-2008-9-2-r34, 2374709, 18279518
-
Engstrom PG, Fredman D, Lenhard B. Ancora: a web resource for exploring highly conserved noncoding elements and their association with developmental regulatory genes. Genome Biol 2008, 9(2):R34. 10.1186/gb-2008-9-2-r34, 2374709, 18279518.
-
(2008)
Genome Biol
, vol.9
, Issue.2
-
-
Engstrom, P.G.1
Fredman, D.2
Lenhard, B.3
-
30
-
-
33845370280
-
RNA polymerase III transcribes human microRNAs
-
10.1038/nsmb1167, 17099701
-
Borchert GM, Lanier W, Davidson BL. RNA polymerase III transcribes human microRNAs. Nat Struct Mol Biol 2006, 13(12):1097-1101. 10.1038/nsmb1167, 17099701.
-
(2006)
Nat Struct Mol Biol
, vol.13
, Issue.12
, pp. 1097-1101
-
-
Borchert, G.M.1
Lanier, W.2
Davidson, B.L.3
-
31
-
-
33750352462
-
Transcriptional regulatory elements in the human genome
-
10.1146/annurev.genom.7.080505.115623, 16719718
-
Maston GA, Evans SK, Green MR. Transcriptional regulatory elements in the human genome. Annu Rev Genomics Hum Genet 2006, 7:29-59. 10.1146/annurev.genom.7.080505.115623, 16719718.
-
(2006)
Annu Rev Genomics Hum Genet
, vol.7
, pp. 29-59
-
-
Maston, G.A.1
Evans, S.K.2
Green, M.R.3
-
32
-
-
0028296414
-
Molecular cloning and functional analysis of the adenovirus E1A-associated 300-kD protein (p300) reveals a protein with properties of a transcriptional adaptor
-
10.1101/gad.8.8.869, 7523245
-
Eckner R, Ewen ME, Newsome D, Gerdes M, DeCaprio JA, Lawrence JB, Livingston DM. Molecular cloning and functional analysis of the adenovirus E1A-associated 300-kD protein (p300) reveals a protein with properties of a transcriptional adaptor. Genes Dev 1994, 8(8):869-884. 10.1101/gad.8.8.869, 7523245.
-
(1994)
Genes Dev
, vol.8
, Issue.8
, pp. 869-884
-
-
Eckner, R.1
Ewen, M.E.2
Newsome, D.3
Gerdes, M.4
DeCaprio, J.A.5
Lawrence, J.B.6
Livingston, D.M.7
-
33
-
-
0029825698
-
Interaction and functional collaboration of p300/CBP and bHLH proteins in muscle and B-cell differentiation
-
10.1101/gad.10.19.2478, 8843199
-
Eckner R, Yao TP, Oldread E, Livingston DM. Interaction and functional collaboration of p300/CBP and bHLH proteins in muscle and B-cell differentiation. Genes Dev 1996, 10(19):2478-2490. 10.1101/gad.10.19.2478, 8843199.
-
(1996)
Genes Dev
, vol.10
, Issue.19
, pp. 2478-2490
-
-
Eckner, R.1
Yao, T.P.2
Oldread, E.3
Livingston, D.M.4
-
34
-
-
17644445419
-
Gene dosage-dependent embryonic development and proliferation defects in mice lacking the transcriptional integrator p300
-
10.1016/S0092-8674(00)81165-4, 9590171
-
Yao TP, Oh SP, Fuchs M, Zhou ND, Ch'ng LE, Newsome D, Bronson RT, Li E, Livingston DM, Eckner R. Gene dosage-dependent embryonic development and proliferation defects in mice lacking the transcriptional integrator p300. Cell 1998, 93(3):361-372. 10.1016/S0092-8674(00)81165-4, 9590171.
-
(1998)
Cell
, vol.93
, Issue.3
, pp. 361-372
-
-
Yao, T.P.1
Oh, S.P.2
Fuchs, M.3
Zhou, N.D.4
Ch'ng, L.E.5
Newsome, D.6
Bronson, R.T.7
Li, E.8
Livingston, D.M.9
Eckner, R.10
-
35
-
-
0031604766
-
Recruitment of CBP/p300 by the IFN beta enhanceosome is required for synergistic activation of transcription
-
10.1016/S1097-2765(00)80028-3, 9659924
-
Merika M, Williams AJ, Chen G, Collins T, Thanos D. Recruitment of CBP/p300 by the IFN beta enhanceosome is required for synergistic activation of transcription. Mol Cell 1998, 1(2):277-287. 10.1016/S1097-2765(00)80028-3, 9659924.
-
(1998)
Mol Cell
, vol.1
, Issue.2
, pp. 277-287
-
-
Merika, M.1
Williams, A.J.2
Chen, G.3
Collins, T.4
Thanos, D.5
-
36
-
-
60149091656
-
ChIP-seq accurately predicts tissue-specific activity of enhancers
-
10.1038/nature07730, 2745234, 19212405
-
Visel A, Blow MJ, Li Z, Zhang T, Akiyama JA, Holt A, Plajzer-Frick I, Shoukry M, Wright C, Chen F, et al. ChIP-seq accurately predicts tissue-specific activity of enhancers. Nature 2009, 457(7231):854-858. 10.1038/nature07730, 2745234, 19212405.
-
(2009)
Nature
, vol.457
, Issue.7231
, pp. 854-858
-
-
Visel, A.1
Blow, M.J.2
Li, Z.3
Zhang, T.4
Akiyama, J.A.5
Holt, A.6
Plajzer-Frick, I.7
Shoukry, M.8
Wright, C.9
Chen, F.10
-
37
-
-
34548434716
-
Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells
-
10.1016/j.stem.2007.08.003, 18371364
-
Pan G, Tian S, Nie J, Yang C, Ruotti V, Wei H, Jonsdottir GA, Stewart R, Thomson JA. Whole-genome analysis of histone H3 lysine 4 and lysine 27 methylation in human embryonic stem cells. Cell Stem Cell 2007, 1(3):299-312. 10.1016/j.stem.2007.08.003, 18371364.
-
(2007)
Cell Stem Cell
, vol.1
, Issue.3
, pp. 299-312
-
-
Pan, G.1
Tian, S.2
Nie, J.3
Yang, C.4
Ruotti, V.5
Wei, H.6
Jonsdottir, G.A.7
Stewart, R.8
Thomson, J.A.9
-
38
-
-
33847334699
-
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
-
10.1038/ng1966, 17277777
-
Heintzman ND, Stuart RK, Hon G, Fu Y, Ching CW, Hawkins RD, Barrera LO, Van Calcar S, Qu C, Ching KA, et al. Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. Nat Genet 2007, 39(3):311-318. 10.1038/ng1966, 17277777.
-
(2007)
Nat Genet
, vol.39
, Issue.3
, pp. 311-318
-
-
Heintzman, N.D.1
Stuart, R.K.2
Hon, G.3
Fu, Y.4
Ching, C.W.5
Hawkins, R.D.6
Barrera, L.O.7
Van Calcar, S.8
Qu, C.9
Ching, K.A.10
-
39
-
-
70349764482
-
Mir-214-dependent regulation of the polycomb protein Ezh2 in skeletal muscle and embryonic stem cells
-
10.1016/j.molcel.2009.08.008, 2761245, 19818710
-
Juan AH, Kumar RM, Marx JG, Young RA, Sartorelli V. Mir-214-dependent regulation of the polycomb protein Ezh2 in skeletal muscle and embryonic stem cells. Mol Cell 2009, 36(1):61-74. 10.1016/j.molcel.2009.08.008, 2761245, 19818710.
-
(2009)
Mol Cell
, vol.36
, Issue.1
, pp. 61-74
-
-
Juan, A.H.1
Kumar, R.M.2
Marx, J.G.3
Young, R.A.4
Sartorelli, V.5
-
40
-
-
54549119169
-
NF-kappaB-YY1-miR-29 regulatory circuitry in skeletal myogenesis and rhabdomyosarcoma
-
10.1016/j.ccr.2008.10.006, 18977326
-
Wang H, Garzon R, Sun H, Ladner KJ, Singh R, Dahlman J, Cheng A, Hall BM, Qualman SJ, Chandler DS, et al. NF-kappaB-YY1-miR-29 regulatory circuitry in skeletal myogenesis and rhabdomyosarcoma. Cancer Cell 2008, 14(5):369-381. 10.1016/j.ccr.2008.10.006, 18977326.
-
(2008)
Cancer Cell
, vol.14
, Issue.5
, pp. 369-381
-
-
Wang, H.1
Garzon, R.2
Sun, H.3
Ladner, K.J.4
Singh, R.5
Dahlman, J.6
Cheng, A.7
Hall, B.M.8
Qualman, S.J.9
Chandler, D.S.10
-
41
-
-
33745480963
-
Specific microRNAs modulate embryonic stem cell-derived neurogenesis
-
10.1634/stemcells.2005-0441, 2605651, 16357340
-
Krichevsky AM, Sonntag KC, Isacson O, Kosik KS. Specific microRNAs modulate embryonic stem cell-derived neurogenesis. Stem Cells 2006, 24(4):857-864. 10.1634/stemcells.2005-0441, 2605651, 16357340.
-
(2006)
Stem Cells
, vol.24
, Issue.4
, pp. 857-864
-
-
Krichevsky, A.M.1
Sonntag, K.C.2
Isacson, O.3
Kosik, K.S.4
-
42
-
-
70450196816
-
MicroRNAs in brain development and physiology
-
10.1016/j.conb.2009.09.006, 19846291
-
Coolen M, Bally-Cuif L. MicroRNAs in brain development and physiology. Curr Opin Neurobiol 2009, 19(5):461-470. 10.1016/j.conb.2009.09.006, 19846291.
-
(2009)
Curr Opin Neurobiol
, vol.19
, Issue.5
, pp. 461-470
-
-
Coolen, M.1
Bally-Cuif, L.2
-
43
-
-
53349180220
-
The evolution and functional diversification of animal microRNA genes
-
10.1038/cr.2008.278, 2712117, 18711447
-
Liu N, Okamura K, Tyler DM, Phillips MD, Chung WJ, Lai EC. The evolution and functional diversification of animal microRNA genes. Cell Res 2008, 18(10):985-996. 10.1038/cr.2008.278, 2712117, 18711447.
-
(2008)
Cell Res
, vol.18
, Issue.10
, pp. 985-996
-
-
Liu, N.1
Okamura, K.2
Tyler, D.M.3
Phillips, M.D.4
Chung, W.J.5
Lai, E.C.6
-
44
-
-
26244444380
-
From 2R to 3R: evidence for a fish-specific genome duplication (FSGD)
-
10.1002/bies.20293, 16108068
-
Meyer A, Van de Peer Y. From 2R to 3R: evidence for a fish-specific genome duplication (FSGD). Bioessays 2005, 27(9):937-945. 10.1002/bies.20293, 16108068.
-
(2005)
Bioessays
, vol.27
, Issue.9
, pp. 937-945
-
-
Meyer, A.1
Van de Peer, Y.2
-
45
-
-
33644772270
-
The expansion of the metazoan microRNA repertoire
-
10.1186/1471-2164-7-25, 1388199, 16480513
-
Hertel J, Lindemeyer M, Missal K, Fried C, Tanzer A, Flamm C, Hofacker IL, Stadler PF. The expansion of the metazoan microRNA repertoire. BMC Genomics 2006, 7:25. 10.1186/1471-2164-7-25, 1388199, 16480513.
-
(2006)
BMC Genomics
, vol.7
, pp. 25
-
-
Hertel, J.1
Lindemeyer, M.2
Missal, K.3
Fried, C.4
Tanzer, A.5
Flamm, C.6
Hofacker, I.L.7
Stadler, P.F.8
-
46
-
-
60549097668
-
Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes
-
10.1016/j.ydbio.2008.10.044, 19073165
-
Navratilova P, Fredman D, Hawkins TA, Turner K, Lenhard B, Becker TS. Systematic human/zebrafish comparative identification of cis-regulatory activity around vertebrate developmental transcription factor genes. Dev Biol 2009, 327(2):526-540. 10.1016/j.ydbio.2008.10.044, 19073165.
-
(2009)
Dev Biol
, vol.327
, Issue.2
, pp. 526-540
-
-
Navratilova, P.1
Fredman, D.2
Hawkins, T.A.3
Turner, K.4
Lenhard, B.5
Becker, T.S.6
-
47
-
-
58149178565
-
The UCSC Genome Browser Database: update 2009
-
Kuhn RM, Karolchik D, Zweig AS, Wang T, Smith KE, Rosenbloom KR, Rhead B, Raney BJ, Pohl A, Pheasant M, et al. The UCSC Genome Browser Database: update 2009. Nucleic Acids Res 2009, (37 Database):D755-761.
-
(2009)
Nucleic Acids Res
, Issue.37
-
-
Kuhn, R.M.1
Karolchik, D.2
Zweig, A.S.3
Wang, T.4
Smith, K.E.5
Rosenbloom, K.R.6
Rhead, B.7
Raney, B.J.8
Pohl, A.9
Pheasant, M.10
-
48
-
-
75549089335
-
Ensembl's 10th year
-
Flicek P, Aken BL, Ballester B, Beal K, Bragin E, Brent S, Chen Y, Clapham P, Coates G, Fairley S, et al. Ensembl's 10th year. Nucleic Acids Res 2010, (38 Database):D557-562.
-
(2010)
Nucleic Acids Res
, Issue.38
-
-
Flicek, P.1
Aken, B.L.2
Ballester, B.3
Beal, K.4
Bragin, E.5
Brent, S.6
Chen, Y.7
Clapham, P.8
Coates, G.9
Fairley, S.10
-
49
-
-
38549170427
-
Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database
-
Cochrane G, Akhtar R, Aldebert P, Althorpe N, Baldwin A, Bates K, Bhattacharyya S, Bonfield J, Bower L, Browne P, et al. Priorities for nucleotide trace, sequence and annotation data capture at the Ensembl Trace Archive and the EMBL Nucleotide Sequence Database. Nucleic Acids Res 2008, (36 Database):D5-12.
-
(2008)
Nucleic Acids Res
, Issue.36
-
-
Cochrane, G.1
Akhtar, R.2
Aldebert, P.3
Althorpe, N.4
Baldwin, A.5
Bates, K.6
Bhattacharyya, S.7
Bonfield, J.8
Bower, L.9
Browne, P.10
-
50
-
-
70350029560
-
Synorth: exploring the evolution of synteny and long-range regulatory interactions in vertebrate genomes
-
10.1186/gb-2009-10-8-r86, 2745767, 19698106
-
Dong X, Fredman D, Lenhard B. Synorth: exploring the evolution of synteny and long-range regulatory interactions in vertebrate genomes. Genome Biol 2009, 10(8):R86. 10.1186/gb-2009-10-8-r86, 2745767, 19698106.
-
(2009)
Genome Biol
, vol.10
, Issue.8
-
-
Dong, X.1
Fredman, D.2
Lenhard, B.3
-
51
-
-
33646367650
-
"Mir"acles in hox gene regulation
-
10.1002/bies.20401, 16615131
-
Chopra VS, Mishra RK. "Mir"acles in hox gene regulation. Bioessays 2006, 28(5):445-448. 10.1002/bies.20401, 16615131.
-
(2006)
Bioessays
, vol.28
, Issue.5
, pp. 445-448
-
-
Chopra, V.S.1
Mishra, R.K.2
-
52
-
-
73249137975
-
In ovo application of antagomiRs indicates a role for miR-196 in patterning the chick axial skeleton through Hox gene regulation
-
10.1073/pnas.0910374106, 2773993, 19846767
-
McGlinn E, Yekta S, Mansfield JH, Soutschek J, Bartel DP, Tabin CJ. In ovo application of antagomiRs indicates a role for miR-196 in patterning the chick axial skeleton through Hox gene regulation. Proc Natl Acad Sci USA 2009, 106(44):18610-18615. 10.1073/pnas.0910374106, 2773993, 19846767.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.44
, pp. 18610-18615
-
-
McGlinn, E.1
Yekta, S.2
Mansfield, J.H.3
Soutschek, J.4
Bartel, D.P.5
Tabin, C.J.6
-
53
-
-
70349269037
-
MiR-196 is an essential early-stage regulator of tail regeneration, upstream of key spinal cord patterning events
-
10.1016/j.ydbio.2009.08.008, 19682983
-
Sehm T, Sachse C, Frenzel C, Echeverri K. miR-196 is an essential early-stage regulator of tail regeneration, upstream of key spinal cord patterning events. Dev Biol 2009, 334(2):468-480. 10.1016/j.ydbio.2009.08.008, 19682983.
-
(2009)
Dev Biol
, vol.334
, Issue.2
, pp. 468-480
-
-
Sehm, T.1
Sachse, C.2
Frenzel, C.3
Echeverri, K.4
-
54
-
-
77957131271
-
MicroRNA-196 represses Bach1 protein and hepatitis C virus gene expression in human hepatoma cells expressing hepatitis C viral proteins
-
Hou W, Tian Q, Zheng J, Bonkovsky HL. MicroRNA-196 represses Bach1 protein and hepatitis C virus gene expression in human hepatoma cells expressing hepatitis C viral proteins. Hepatology 2009,
-
(2009)
Hepatology
-
-
Hou, W.1
Tian, Q.2
Zheng, J.3
Bonkovsky, H.L.4
-
55
-
-
75949101467
-
Regulation of synaptic structure and function by FMRP-associated microRNAs miR-125b and miR-132
-
10.1016/j.neuron.2010.01.005, 20159450
-
Edbauer D, Neilson JR, Foster KA, Wang CF, Seeburg DP, Batterton MN, Tada T, Dolan BM, Sharp PA, Sheng M. Regulation of synaptic structure and function by FMRP-associated microRNAs miR-125b and miR-132. Neuron 2010, 65(3):373-384. 10.1016/j.neuron.2010.01.005, 20159450.
-
(2010)
Neuron
, vol.65
, Issue.3
, pp. 373-384
-
-
Edbauer, D.1
Neilson, J.R.2
Foster, K.A.3
Wang, C.F.4
Seeburg, D.P.5
Batterton, M.N.6
Tada, T.7
Dolan, B.M.8
Sharp, P.A.9
Sheng, M.10
-
56
-
-
79959561974
-
Ischemic preconditioning regulates expression of microRNAs and a predicted target, MeCP2, in mouse cortex
-
Lusardi TA, Farr CD, Faulkner CL, Pignataro G, Yang T, Lan J, Simon RP, Saugstad JA. Ischemic preconditioning regulates expression of microRNAs and a predicted target, MeCP2, in mouse cortex. J Cereb Blood Flow Metab 2009,
-
(2009)
J Cereb Blood Flow Metab
-
-
Lusardi, T.A.1
Farr, C.D.2
Faulkner, C.L.3
Pignataro, G.4
Yang, T.5
Lan, J.6
Simon, R.P.7
Saugstad, J.A.8
-
57
-
-
71749084011
-
MicroRNA-132 potentiates cholinergic anti-inflammatory signaling by targeting acetylcholinesterase
-
10.1016/j.immuni.2009.09.019, 20005135
-
Shaked I, Meerson A, Wolf Y, Avni R, Greenberg D, Gilboa-Geffen A, Soreq H. MicroRNA-132 potentiates cholinergic anti-inflammatory signaling by targeting acetylcholinesterase. Immunity 2009, 31(6):965-973. 10.1016/j.immuni.2009.09.019, 20005135.
-
(2009)
Immunity
, vol.31
, Issue.6
, pp. 965-973
-
-
Shaked, I.1
Meerson, A.2
Wolf, Y.3
Avni, R.4
Greenberg, D.5
Gilboa-Geffen, A.6
Soreq, H.7
-
58
-
-
77952885566
-
Neuronal activity rapidly induces transcription of the CREB-regulated microRNA-132, in vivo
-
Nudelman AS, Dirocco DP, Lambert TJ, Garelick MG, Le J, Nathanson NM, Storm DR. Neuronal activity rapidly induces transcription of the CREB-regulated microRNA-132, in vivo. Hippocampus 2009,
-
(2009)
Hippocampus
-
-
Nudelman, A.S.1
Dirocco, D.P.2
Lambert, T.J.3
Garelick, M.G.4
Le, J.5
Nathanson, N.M.6
Storm, D.R.7
-
59
-
-
60549117656
-
Microtranscriptome regulation by gonadotropin-releasing hormone
-
10.1016/j.mce.2008.12.013, 2683625, 19356622
-
Yuen T, Ruf F, Chu T, Sealfon SC. Microtranscriptome regulation by gonadotropin-releasing hormone. Mol Cell Endocrinol 2009, 302(1):12-17. 10.1016/j.mce.2008.12.013, 2683625, 19356622.
-
(2009)
Mol Cell Endocrinol
, vol.302
, Issue.1
, pp. 12-17
-
-
Yuen, T.1
Ruf, F.2
Chu, T.3
Sealfon, S.C.4
-
60
-
-
34249713720
-
MicroRNA modulation of circadian-clock period and entrainment
-
10.1016/j.neuron.2007.05.017, 2590749, 17553428
-
Cheng HY, Papp JW, Varlamova O, Dziema H, Russell B, Curfman JP, Nakazawa T, Shimizu K, Okamura H, Impey S, et al. microRNA modulation of circadian-clock period and entrainment. Neuron 2007, 54(5):813-829. 10.1016/j.neuron.2007.05.017, 2590749, 17553428.
-
(2007)
Neuron
, vol.54
, Issue.5
, pp. 813-829
-
-
Cheng, H.Y.1
Papp, J.W.2
Varlamova, O.3
Dziema, H.4
Russell, B.5
Curfman, J.P.6
Nakazawa, T.7
Shimizu, K.8
Okamura, H.9
Impey, S.10
-
61
-
-
33847203593
-
Micro-RNA speciation in fetal, adult and Alzheimer's disease hippocampus
-
10.1097/WNR.0b013e3280148e8b, 17314675
-
Lukiw WJ. Micro-RNA speciation in fetal, adult and Alzheimer's disease hippocampus. Neuroreport 2007, 18(3):297-300. 10.1097/WNR.0b013e3280148e8b, 17314675.
-
(2007)
Neuroreport
, vol.18
, Issue.3
, pp. 297-300
-
-
Lukiw, W.J.1
-
62
-
-
73649145183
-
Localization- and mutation-dependent microRNA (miRNA) expression signatures in gastrointestinal stromal tumours (GISTs), with a cluster of co-expressed miRNAs located at 14q32.31
-
10.1002/path.2610, 19768731
-
Haller F, von Heydebreck A, Zhang JD, Gunawan B, Langer C, Ramadori G, Wiemann S, Sahin O. Localization- and mutation-dependent microRNA (miRNA) expression signatures in gastrointestinal stromal tumours (GISTs), with a cluster of co-expressed miRNAs located at 14q32.31. J Pathol 2010, 220(1):71-86. 10.1002/path.2610, 19768731.
-
(2010)
J Pathol
, vol.220
, Issue.1
, pp. 71-86
-
-
Haller, F.1
von Heydebreck, A.2
Zhang, J.D.3
Gunawan, B.4
Langer, C.5
Ramadori, G.6
Wiemann, S.7
Sahin, O.8
-
63
-
-
74249095917
-
MiR-10 in development and cancer
-
10.1038/cdd.2009.58, 19461655
-
Lund AH. miR-10 in development and cancer. Cell Death Differ 2010, 17(2):209-214. 10.1038/cdd.2009.58, 19461655.
-
(2010)
Cell Death Differ
, vol.17
, Issue.2
, pp. 209-214
-
-
Lund, A.H.1
-
64
-
-
33947286842
-
MicroRNA expression profiling during human cord blood-derived CD34 cell erythropoiesis
-
10.1016/j.exphem.2006.12.002, 17379065
-
Choong ML, Yang HH, McNiece I. MicroRNA expression profiling during human cord blood-derived CD34 cell erythropoiesis. Exp Hematol 2007, 35(4):551-564. 10.1016/j.exphem.2006.12.002, 17379065.
-
(2007)
Exp Hematol
, vol.35
, Issue.4
, pp. 551-564
-
-
Choong, M.L.1
Yang, H.H.2
McNiece, I.3
-
65
-
-
68149160861
-
MicroRNA expression profile in non-cancerous colonic tissue associated with lymph node metastasis of colon cancer
-
10.1111/j.1751-2980.2009.00384.x, 19659786
-
Huang ZM, Yang J, Shen XY, Zhang XY, Meng FS, Xu JT, Zhang BF, Gao HJ. MicroRNA expression profile in non-cancerous colonic tissue associated with lymph node metastasis of colon cancer. J Dig Dis 2009, 10(3):188-194. 10.1111/j.1751-2980.2009.00384.x, 19659786.
-
(2009)
J Dig Dis
, vol.10
, Issue.3
, pp. 188-194
-
-
Huang, Z.M.1
Yang, J.2
Shen, X.Y.3
Zhang, X.Y.4
Meng, F.S.5
Xu, J.T.6
Zhang, B.F.7
Gao, H.J.8
-
66
-
-
48949116262
-
MiR-124 and miR-137 inhibit proliferation of glioblastoma multiforme cells and induce differentiation of brain tumor stem cells
-
10.1186/1741-7015-6-14, 2443372, 18577219
-
Silber J, Lim DA, Petritsch C, Persson AI, Maunakea AK, Yu M, Vandenberg SR, Ginzinger DG, James CD, Costello JF, et al. miR-124 and miR-137 inhibit proliferation of glioblastoma multiforme cells and induce differentiation of brain tumor stem cells. BMC Med 2008, 6:14. 10.1186/1741-7015-6-14, 2443372, 18577219.
-
(2008)
BMC Med
, vol.6
, pp. 14
-
-
Silber, J.1
Lim, D.A.2
Petritsch, C.3
Persson, A.I.4
Maunakea, A.K.5
Yu, M.6
Vandenberg, S.R.7
Ginzinger, D.G.8
James, C.D.9
Costello, J.F.10
-
67
-
-
40449094344
-
MicroRNA-137 targets microphthalmia-associated transcription factor in melanoma cell lines
-
10.1158/0008-5472.CAN-07-2912, 18316599
-
Bemis LT, Chen R, Amato CM, Classen EH, Robinson SE, Coffey DG, Erickson PF, Shellman YG, Robinson WA. MicroRNA-137 targets microphthalmia-associated transcription factor in melanoma cell lines. Cancer Res 2008, 68(5):1362-1368. 10.1158/0008-5472.CAN-07-2912, 18316599.
-
(2008)
Cancer Res
, vol.68
, Issue.5
, pp. 1362-1368
-
-
Bemis, L.T.1
Chen, R.2
Amato, C.M.3
Classen, E.H.4
Robinson, S.E.5
Coffey, D.G.6
Erickson, P.F.7
Shellman, Y.G.8
Robinson, W.A.9
-
68
-
-
70350433377
-
Function of microRNA-375 and microRNA-124a in pancreas and brain
-
10.1111/j.1742-4658.2009.07353.x, 20102393
-
Baroukh NN, Van Obberghen E. Function of microRNA-375 and microRNA-124a in pancreas and brain. Febs J 2009, 276(22):6509-6521. 10.1111/j.1742-4658.2009.07353.x, 20102393.
-
(2009)
Febs J
, vol.276
, Issue.22
, pp. 6509-6521
-
-
Baroukh, N.N.1
Van Obberghen, E.2
-
69
-
-
65249186738
-
MicroRNA expression ratio is predictive of head and neck squamous cell carcinoma
-
10.1158/1078-0432.CCR-08-3131, 2669849, 19351747
-
Avissar M, Christensen BC, Kelsey KT, Marsit CJ. MicroRNA expression ratio is predictive of head and neck squamous cell carcinoma. Clin Cancer Res 2009, 15(8):2850-2855. 10.1158/1078-0432.CCR-08-3131, 2669849, 19351747.
-
(2009)
Clin Cancer Res
, vol.15
, Issue.8
, pp. 2850-2855
-
-
Avissar, M.1
Christensen, B.C.2
Kelsey, K.T.3
Marsit, C.J.4
-
70
-
-
70349662168
-
MicroRNA expression in squamous cell carcinoma and adenocarcinoma of the esophagus: associations with survival
-
10.1158/1078-0432.CCR-09-1467, 2933109, 19789312
-
Mathe EA, Nguyen GH, Bowman ED, Zhao Y, Budhu A, Schetter AJ, Braun R, Reimers M, Kumamoto K, Hughes D, et al. MicroRNA expression in squamous cell carcinoma and adenocarcinoma of the esophagus: associations with survival. Clin Cancer Res 2009, 15(19):6192-6200. 10.1158/1078-0432.CCR-09-1467, 2933109, 19789312.
-
(2009)
Clin Cancer Res
, vol.15
, Issue.19
, pp. 6192-6200
-
-
Mathe, E.A.1
Nguyen, G.H.2
Bowman, E.D.3
Zhao, Y.4
Budhu, A.5
Schetter, A.J.6
Braun, R.7
Reimers, M.8
Kumamoto, K.9
Hughes, D.10
-
71
-
-
73949123790
-
MicroRNA expression in head and neck cancer associates with alcohol consumption and survival
-
10.1093/carcin/bgp277, 2792323, 19901002
-
Avissar M, McClean MD, Kelsey KT, Marsit CJ. MicroRNA expression in head and neck cancer associates with alcohol consumption and survival. Carcinogenesis 2009, 30(12):2059-2063. 10.1093/carcin/bgp277, 2792323, 19901002.
-
(2009)
Carcinogenesis
, vol.30
, Issue.12
, pp. 2059-2063
-
-
Avissar, M.1
McClean, M.D.2
Kelsey, K.T.3
Marsit, C.J.4
-
72
-
-
76749160835
-
Comprehensive MicroRNA profiling for head and neck squamous cell carcinomas
-
10.1158/1078-0432.CCR-09-2166, 20145181
-
Hui AB, Lenarduzzi M, Krushel T, Waldron L, Pintilie M, Shi W, Perez-Ordonez B, Jurisica I, O'Sullivan B, Waldron J, et al. Comprehensive MicroRNA profiling for head and neck squamous cell carcinomas. Clin Cancer Res 2010, 16(4):1129-1139. 10.1158/1078-0432.CCR-09-2166, 20145181.
-
(2010)
Clin Cancer Res
, vol.16
, Issue.4
, pp. 1129-1139
-
-
Hui, A.B.1
Lenarduzzi, M.2
Krushel, T.3
Waldron, L.4
Pintilie, M.5
Shi, W.6
Perez-Ordonez, B.7
Jurisica, I.8
O'Sullivan, B.9
Waldron, J.10
-
73
-
-
46249083024
-
MicroRNA profiling in hepatocellular tumors is associated with clinical features and oncogene/tumor suppressor gene mutations
-
10.1002/hep.22256, 18433021
-
Ladeiro Y, Couchy G, Balabaud C, Bioulac-Sage P, Pelletier L, Rebouissou S, Zucman-Rossi J. MicroRNA profiling in hepatocellular tumors is associated with clinical features and oncogene/tumor suppressor gene mutations. Hepatology 2008, 47(6):1955-1963. 10.1002/hep.22256, 18433021.
-
(2008)
Hepatology
, vol.47
, Issue.6
, pp. 1955-1963
-
-
Ladeiro, Y.1
Couchy, G.2
Balabaud, C.3
Bioulac-Sage, P.4
Pelletier, L.5
Rebouissou, S.6
Zucman-Rossi, J.7
-
74
-
-
64549163250
-
The promoter of the pri-miR-375 gene directs expression selectively to the endocrine pancreas
-
10.1371/journal.pone.0005033, 2660411, 19343226
-
Avnit-Sagi T, Kantorovich L, Kredo-Russo S, Hornstein E, Walker MD. The promoter of the pri-miR-375 gene directs expression selectively to the endocrine pancreas. PLoS One 2009, 4(4):e5033. 10.1371/journal.pone.0005033, 2660411, 19343226.
-
(2009)
PLoS One
, vol.4
, Issue.4
-
-
Avnit-Sagi, T.1
Kantorovich, L.2
Kredo-Russo, S.3
Hornstein, E.4
Walker, M.D.5
-
75
-
-
34147157651
-
The microRNA miR-124 antagonizes the anti-neural REST/SCP1 pathway during embryonic CNS development
-
10.1101/gad.1519107, 1838526, 17403776
-
Visvanathan J, Lee S, Lee B, Lee JW, Lee SK. The microRNA miR-124 antagonizes the anti-neural REST/SCP1 pathway during embryonic CNS development. Genes Dev 2007, 21(7):744-749. 10.1101/gad.1519107, 1838526, 17403776.
-
(2007)
Genes Dev
, vol.21
, Issue.7
, pp. 744-749
-
-
Visvanathan, J.1
Lee, S.2
Lee, B.3
Lee, J.W.4
Lee, S.K.5
-
76
-
-
55049097738
-
Role of microRNAs in diabetes
-
2643014, 18655850
-
Tang X, Tang G, Ozcan S. Role of microRNAs in diabetes. Biochim Biophys Acta 2008, 1779(11):697-701. 2643014, 18655850.
-
(2008)
Biochim Biophys Acta
, vol.1779
, Issue.11
, pp. 697-701
-
-
Tang, X.1
Tang, G.2
Ozcan, S.3
-
77
-
-
57849113260
-
The expression and ovarian steroid regulation of endometrial micro-RNAs
-
10.1177/1933719108324132, 2729333, 19088369
-
Toloubeydokhti T, Pan Q, Luo X, Bukulmez O, Chegini N. The expression and ovarian steroid regulation of endometrial micro-RNAs. Reprod Sci 2008, 15(10):993-1001. 10.1177/1933719108324132, 2729333, 19088369.
-
(2008)
Reprod Sci
, vol.15
, Issue.10
, pp. 993-1001
-
-
Toloubeydokhti, T.1
Pan, Q.2
Luo, X.3
Bukulmez, O.4
Chegini, N.5
-
78
-
-
62249200634
-
[Knockdown and overexpression of miR-219 lead to embryonic defects in zebrafish development]
-
Zhang MC, Lv Y, Qi YT, Zhang Z, Fu XN, Yuan CG, Lai LH. [Knockdown and overexpression of miR-219 lead to embryonic defects in zebrafish development]. Fen Zi Xi Bao Sheng Wu Xue Bao 2008, 41(5):341-348.
-
(2008)
Fen Zi Xi Bao Sheng Wu Xue Bao
, vol.41
, Issue.5
, pp. 341-348
-
-
Zhang, M.C.1
Lv, Y.2
Qi, Y.T.3
Zhang, Z.4
Fu, X.N.5
Yuan, C.G.6
Lai, L.H.7
-
79
-
-
60149100762
-
Identification of new microRNA genes and aberrant microRNA profiles in childhood acute lymphoblastic leukemia
-
10.1038/leu.2008.286, 18923441
-
Schotte D, Chau JC, Sylvester G, Liu G, Chen C, van der Velden VH, Broekhuis MJ, Peters TC, Pieters R, den Boer ML. Identification of new microRNA genes and aberrant microRNA profiles in childhood acute lymphoblastic leukemia. Leukemia 2009, 23(2):313-322. 10.1038/leu.2008.286, 18923441.
-
(2009)
Leukemia
, vol.23
, Issue.2
, pp. 313-322
-
-
Schotte, D.1
Chau, J.C.2
Sylvester, G.3
Liu, G.4
Chen, C.5
van der Velden, V.H.6
Broekhuis, M.J.7
Peters, T.C.8
Pieters, R.9
den Boer, M.L.10
-
80
-
-
58849106024
-
MicroRNA-regulated pathways associated with endometriosis
-
Ohlsson Teague EM, Van der Hoek KH, Van der Hoek MB, Perry N, Wagaarachchi P, Robertson SA, Print CG, Hull LM. MicroRNA-regulated pathways associated with endometriosis. Mol Endocrinol 2009, 23(2):265-275.
-
(2009)
Mol Endocrinol
, vol.23
, Issue.2
, pp. 265-275
-
-
Ohlsson Teague, E.M.1
Van der Hoek, K.H.2
Van der Hoek, M.B.3
Perry, N.4
Wagaarachchi, P.5
Robertson, S.A.6
Print, C.G.7
Hull, L.M.8
-
81
-
-
75849155488
-
MicroRNAs couple cell fate and developmental timing in retina
-
10.1073/pnas.0909167106, 2781736, 19965369
-
Decembrini S, Bressan D, Vignali R, Pitto L, Mariotti S, Rainaldi G, Wang X, Evangelista M, Barsacchi G, Cremisi F. MicroRNAs couple cell fate and developmental timing in retina. Proc Natl Acad Sci USA 2009, 106(50):21179-21184. 10.1073/pnas.0909167106, 2781736, 19965369.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.50
, pp. 21179-21184
-
-
Decembrini, S.1
Bressan, D.2
Vignali, R.3
Pitto, L.4
Mariotti, S.5
Rainaldi, G.6
Wang, X.7
Evangelista, M.8
Barsacchi, G.9
Cremisi, F.10
-
82
-
-
73749084778
-
MicroRNAs regulation modulated self-renewal and lineage differentiation of stem cells
-
10.3727/096368909X471224, 19523330
-
Liu SP, Fu RH, Yu HH, Li KW, Tsai CH, Shyu WC, Lin SZ. MicroRNAs regulation modulated self-renewal and lineage differentiation of stem cells. Cell Transplant 2009, 18(9):1039-1045. 10.3727/096368909X471224, 19523330.
-
(2009)
Cell Transplant
, vol.18
, Issue.9
, pp. 1039-1045
-
-
Liu, S.P.1
Fu, R.H.2
Yu, H.H.3
Li, K.W.4
Tsai, C.H.5
Shyu, W.C.6
Lin, S.Z.7
-
83
-
-
64549124430
-
MicroRNA expression profile in undifferentiated gastric cancer
-
Katada T, Ishiguro H, Kuwabara Y, Kimura M, Mitui A, Mori Y, Ogawa R, Harata K, Fujii Y. microRNA expression profile in undifferentiated gastric cancer. Int J Oncol 2009, 34(2):537-542.
-
(2009)
Int J Oncol
, vol.34
, Issue.2
, pp. 537-542
-
-
Katada, T.1
Ishiguro, H.2
Kuwabara, Y.3
Kimura, M.4
Mitui, A.5
Mori, Y.6
Ogawa, R.7
Harata, K.8
Fujii, Y.9
-
84
-
-
66349104794
-
Genomic profiling of microRNAs in bladder cancer: miR-129 is associated with poor outcome and promotes cell death in vitro
-
10.1158/0008-5472.CAN-08-4043, 19487295
-
Dyrskjot L, Ostenfeld MS, Bramsen JB, Silahtaroglu AN, Lamy P, Ramanathan R, Fristrup N, Jensen JL, Andersen CL, Zieger K, et al. Genomic profiling of microRNAs in bladder cancer: miR-129 is associated with poor outcome and promotes cell death in vitro. Cancer Res 2009, 69(11):4851-4860. 10.1158/0008-5472.CAN-08-4043, 19487295.
-
(2009)
Cancer Res
, vol.69
, Issue.11
, pp. 4851-4860
-
-
Dyrskjot, L.1
Ostenfeld, M.S.2
Bramsen, J.B.3
Silahtaroglu, A.N.4
Lamy, P.5
Ramanathan, R.6
Fristrup, N.7
Jensen, J.L.8
Andersen, C.L.9
Zieger, K.10
-
85
-
-
70350731129
-
Epigenetic regulation of microRNA expression in colorectal cancer
-
10.1002/ijc.24638, 19521961
-
Bandres E, Agirre X, Bitarte N, Ramirez N, Zarate R, Roman-Gomez J, Prosper F, Garcia-Foncillas J. Epigenetic regulation of microRNA expression in colorectal cancer. Int J Cancer 2009, 125(11):2737-2743. 10.1002/ijc.24638, 19521961.
-
(2009)
Int J Cancer
, vol.125
, Issue.11
, pp. 2737-2743
-
-
Bandres, E.1
Agirre, X.2
Bitarte, N.3
Ramirez, N.4
Zarate, R.5
Roman-Gomez, J.6
Prosper, F.7
Garcia-Foncillas, J.8
-
86
-
-
67650664984
-
Expression profiling of micro-RNAs in human esophageal squamous cell carcinoma using RT-PCR
-
10.1007/s00795-009-0443-1, 19536617
-
Ogawa R, Ishiguro H, Kuwabara Y, Kimura M, Mitsui A, Katada T, Harata K, Tanaka T, Fujii Y. Expression profiling of micro-RNAs in human esophageal squamous cell carcinoma using RT-PCR. Med Mol Morphol 2009, 42(2):102-109. 10.1007/s00795-009-0443-1, 19536617.
-
(2009)
Med Mol Morphol
, vol.42
, Issue.2
, pp. 102-109
-
-
Ogawa, R.1
Ishiguro, H.2
Kuwabara, Y.3
Kimura, M.4
Mitsui, A.5
Katada, T.6
Harata, K.7
Tanaka, T.8
Fujii, Y.9
-
87
-
-
75749085462
-
MicroRNA expression profiles in umbilical cord blood cell lineages
-
10.1089/scd.2009.0071, 19435428
-
Merkerova M, Vasikova A, Belickova M, Bruchova H. MicroRNA expression profiles in umbilical cord blood cell lineages. Stem Cells Dev 2010, 19(1):17-26. 10.1089/scd.2009.0071, 19435428.
-
(2010)
Stem Cells Dev
, vol.19
, Issue.1
, pp. 17-26
-
-
Merkerova, M.1
Vasikova, A.2
Belickova, M.3
Bruchova, H.4
-
88
-
-
60549094934
-
In vivo profile of the human leukocyte microRNA response to endotoxemia
-
10.1016/j.bbrc.2008.12.190, 19284987
-
Schmidt WM, Spiel AO, Jilma B, Wolzt M, Muller M. In vivo profile of the human leukocyte microRNA response to endotoxemia. Biochem Biophys Res Commun 2009, 380(3):437-441. 10.1016/j.bbrc.2008.12.190, 19284987.
-
(2009)
Biochem Biophys Res Commun
, vol.380
, Issue.3
, pp. 437-441
-
-
Schmidt, W.M.1
Spiel, A.O.2
Jilma, B.3
Wolzt, M.4
Muller, M.5
-
89
-
-
33747608638
-
NF-kappaB-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses
-
10.1073/pnas.0605298103, 1567904, 16885212
-
Taganov KD, Boldin MP, Chang KJ, Baltimore D. NF-kappaB-dependent induction of microRNA miR-146, an inhibitor targeted to signaling proteins of innate immune responses. Proc Natl Acad Sci USA 2006, 103(33):12481-12486. 10.1073/pnas.0605298103, 1567904, 16885212.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, Issue.33
, pp. 12481-12486
-
-
Taganov, K.D.1
Boldin, M.P.2
Chang, K.J.3
Baltimore, D.4
-
90
-
-
75149130928
-
Evaluation of microRNA expression profiles that may predict recurrence of localized stage I non-small cell lung cancer after surgical resection
-
10.1158/0008-5472.CAN-09-3153, 20028859
-
Patnaik SK, Kannisto E, Knudsen S, Yendamuri S. Evaluation of microRNA expression profiles that may predict recurrence of localized stage I non-small cell lung cancer after surgical resection. Cancer Res 2010, 70(1):36-45. 10.1158/0008-5472.CAN-09-3153, 20028859.
-
(2010)
Cancer Res
, vol.70
, Issue.1
, pp. 36-45
-
-
Patnaik, S.K.1
Kannisto, E.2
Knudsen, S.3
Yendamuri, S.4
-
91
-
-
77953648970
-
MicroRNA expression profiling of megakaryocytes in primary myelofibrosis and essential thrombocythemia
-
10.1080/09537100903114537, 19811223
-
Hussein K, Theophile K, Dralle W, Wiese B, Kreipe H, Bock O. MicroRNA expression profiling of megakaryocytes in primary myelofibrosis and essential thrombocythemia. Platelets 2009, 20(6):391-400. 10.1080/09537100903114537, 19811223.
-
(2009)
Platelets
, vol.20
, Issue.6
, pp. 391-400
-
-
Hussein, K.1
Theophile, K.2
Dralle, W.3
Wiese, B.4
Kreipe, H.5
Bock, O.6
-
92
-
-
77649196575
-
Alteration of microRNA expression in vinyl carbamate-induced mouse lung tumors and modulation by the chemopreventive agent indole-3-carbinol
-
10.1093/carcin/bgp208, 19748927
-
Melkamu T, Zhang X, Tan J, Zeng Y, Kassie F. Alteration of microRNA expression in vinyl carbamate-induced mouse lung tumors and modulation by the chemopreventive agent indole-3-carbinol. Carcinogenesis 2010, 31(2):252-258. 10.1093/carcin/bgp208, 19748927.
-
(2010)
Carcinogenesis
, vol.31
, Issue.2
, pp. 252-258
-
-
Melkamu, T.1
Zhang, X.2
Tan, J.3
Zeng, Y.4
Kassie, F.5
-
93
-
-
67651002796
-
MicroRNA classifiers for predicting prognosis of squamous cell lung cancer
-
10.1158/0008-5472.CAN-09-0587, 19584273
-
Raponi M, Dossey L, Jatkoe T, Wu X, Chen G, Fan H, Beer DG. MicroRNA classifiers for predicting prognosis of squamous cell lung cancer. Cancer Res 2009, 69(14):5776-5783. 10.1158/0008-5472.CAN-09-0587, 19584273.
-
(2009)
Cancer Res
, vol.69
, Issue.14
, pp. 5776-5783
-
-
Raponi, M.1
Dossey, L.2
Jatkoe, T.3
Wu, X.4
Chen, G.5
Fan, H.6
Beer, D.G.7
-
94
-
-
77952707662
-
MicroRNA-370 controls the expression of microRNA-122 and Cpt1{alpha} and affects lipid metabolism
-
Iliopoulos D, Drosatos K, Hiyama Y, Goldberg IJ, Zannis VI. MicroRNA-370 controls the expression of microRNA-122 and Cpt1{alpha} and affects lipid metabolism. J Lipid Res 2010,
-
(2010)
J Lipid Res
-
-
Iliopoulos, D.1
Drosatos, K.2
Hiyama, Y.3
Goldberg, I.J.4
Zannis, V.I.5
-
95
-
-
73149089909
-
Regulation of hepatic MicroRNA expression in response to ischemic preconditioning following ischemia/reperfusion injury in mice
-
10.1089/omi.2009.0035, 19780683
-
Xu CF, Yu CH, Li YM. Regulation of hepatic MicroRNA expression in response to ischemic preconditioning following ischemia/reperfusion injury in mice. Omics 2009, 13(6):513-520. 10.1089/omi.2009.0035, 19780683.
-
(2009)
Omics
, vol.13
, Issue.6
, pp. 513-520
-
-
Xu, C.F.1
Yu, C.H.2
Li, Y.M.3
-
96
-
-
47749117212
-
Distinctive patterns of microRNA expression associated with karyotype in acute myeloid leukaemia
-
10.1371/journal.pone.0002141, 2373886, 18478077
-
Dixon-McIver A, East P, Mein CA, Cazier JB, Molloy G, Chaplin T, Andrew Lister T, Young BD, Debernardi S. Distinctive patterns of microRNA expression associated with karyotype in acute myeloid leukaemia. PLoS One 2008, 3(5):e2141. 10.1371/journal.pone.0002141, 2373886, 18478077.
-
(2008)
PLoS One
, vol.3
, Issue.5
-
-
Dixon-McIver, A.1
East, P.2
Mein, C.A.3
Cazier, J.B.4
Molloy, G.5
Chaplin, T.6
Andrew Lister, T.7
Young, B.D.8
Debernardi, S.9
-
97
-
-
38049152791
-
Epigenetic regulation of microRNA-370 by interleukin-6 in malignant human cholangiocytes
-
10.1038/sj.onc.1210648, 17621267
-
Meng F, Wehbe-Janek H, Henson R, Smith H, Patel T. Epigenetic regulation of microRNA-370 by interleukin-6 in malignant human cholangiocytes. Oncogene 2008, 27(3):378-386. 10.1038/sj.onc.1210648, 17621267.
-
(2008)
Oncogene
, vol.27
, Issue.3
, pp. 378-386
-
-
Meng, F.1
Wehbe-Janek, H.2
Henson, R.3
Smith, H.4
Patel, T.5
-
98
-
-
77951841445
-
Reprogramming of miRNA networks in cancer and leukemia
-
10.1101/gr.098046.109, 2860161, 20439436
-
Volinia S, Galasso M, Costinean S, Tagliavini L, Gamberoni G, Drusco A, Marchesini J, Mascellani N, Sana ME, Abu Jarour R, et al. Reprogramming of miRNA networks in cancer and leukemia. Genome Res 2010, 20(5):589-599. 10.1101/gr.098046.109, 2860161, 20439436.
-
(2010)
Genome Res
, vol.20
, Issue.5
, pp. 589-599
-
-
Volinia, S.1
Galasso, M.2
Costinean, S.3
Tagliavini, L.4
Gamberoni, G.5
Drusco, A.6
Marchesini, J.7
Mascellani, N.8
Sana, M.E.9
Abu Jarour, R.10
-
99
-
-
77952879648
-
Hsa-mir-182 suppresses lung tumorigenesis through down regulation of RGS17 expression in vitro
-
Sun Y, Fang R, Li C, Li L, Li F, Ye X, Chen H. Hsa-mir-182 suppresses lung tumorigenesis through down regulation of RGS17 expression in vitro. Biochem Biophys Res Commun 2010,
-
(2010)
Biochem Biophys Res Commun
-
-
Sun, Y.1
Fang, R.2
Li, C.3
Li, L.4
Li, F.5
Ye, X.6
Chen, H.7
-
100
-
-
39749140336
-
MicroRNA regulation of cell lineages in mouse and human embryonic stem cells
-
10.1016/j.stem.2008.01.016, 2293325, 18371447
-
Ivey KN, Muth A, Arnold J, King FW, Yeh RF, Fish JE, Hsiao EC, Schwartz RJ, Conklin BR, Bernstein HS, et al. MicroRNA regulation of cell lineages in mouse and human embryonic stem cells. Cell Stem Cell 2008, 2(3):219-229. 10.1016/j.stem.2008.01.016, 2293325, 18371447.
-
(2008)
Cell Stem Cell
, vol.2
, Issue.3
, pp. 219-229
-
-
Ivey, K.N.1
Muth, A.2
Arnold, J.3
King, F.W.4
Yeh, R.F.5
Fish, J.E.6
Hsiao, E.C.7
Schwartz, R.J.8
Conklin, B.R.9
Bernstein, H.S.10
-
101
-
-
40749111551
-
A skin microRNA promotes differentiation by repressing 'stemness'
-
10.1038/nature06642, 18311128
-
Yi R, Poy MN, Stoffel M, Fuchs E. A skin microRNA promotes differentiation by repressing 'stemness'. Nature 2008, 452(7184):225-229. 10.1038/nature06642, 18311128.
-
(2008)
Nature
, vol.452
, Issue.7184
, pp. 225-229
-
-
Yi, R.1
Poy, M.N.2
Stoffel, M.3
Fuchs, E.4
-
102
-
-
18744396337
-
Frequent deletions and down-regulation of micro-RNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia
-
10.1073/pnas.242606799, 137750, 12434020
-
Calin GA, Dumitru CD, Shimizu M, Bichi R, Zupo S, Noch E, Aldler H, Rattan S, Keating M, Rai K, et al. Frequent deletions and down-regulation of micro-RNA genes miR15 and miR16 at 13q14 in chronic lymphocytic leukemia. Proc Natl Acad Sci USA 2002, 99(24):15524-15529. 10.1073/pnas.242606799, 137750, 12434020.
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, Issue.24
, pp. 15524-15529
-
-
Calin, G.A.1
Dumitru, C.D.2
Shimizu, M.3
Bichi, R.4
Zupo, S.5
Noch, E.6
Aldler, H.7
Rattan, S.8
Keating, M.9
Rai, K.10
-
103
-
-
35449003175
-
MicroRNA let-7a down-regulates MYC and reverts MYC-induced growth in Burkitt lymphoma cells
-
10.1158/0008-5472.CAN-07-2462, 17942906
-
Sampson VB, Rong NH, Han J, Yang Q, Aris V, Soteropoulos P, Petrelli NJ, Dunn SP, Krueger LJ. MicroRNA let-7a down-regulates MYC and reverts MYC-induced growth in Burkitt lymphoma cells. Cancer Res 2007, 67(20):9762-9770. 10.1158/0008-5472.CAN-07-2462, 17942906.
-
(2007)
Cancer Res
, vol.67
, Issue.20
, pp. 9762-9770
-
-
Sampson, V.B.1
Rong, N.H.2
Han, J.3
Yang, Q.4
Aris, V.5
Soteropoulos, P.6
Petrelli, N.J.7
Dunn, S.P.8
Krueger, L.J.9
-
104
-
-
43049133807
-
MicroRNA let-7b targets important cell cycle molecules in malignant melanoma cells and interferes with anchorage-independent growth
-
10.1038/cr.2008.45, 18379589
-
Schultz J, Lorenz P, Gross G, Ibrahim S, Kunz M. MicroRNA let-7b targets important cell cycle molecules in malignant melanoma cells and interferes with anchorage-independent growth. Cell Res 2008, 18(5):549-557. 10.1038/cr.2008.45, 18379589.
-
(2008)
Cell Res
, vol.18
, Issue.5
, pp. 549-557
-
-
Schultz, J.1
Lorenz, P.2
Gross, G.3
Ibrahim, S.4
Kunz, M.5
|