Development of a lab-on-a-chip device for diagnosis of plant pathogens

Biosensors and Bioelectronics

Volumn 26, Issue 10, 2011, Pages 4070-4075

  Julich, Sandra ^a   Riedel, Marko ^b   Kielpinski, Mark ^a   Urban, Matthias ^a   Kretschmer, Robert ^a,c   Wagner, Stefan ^b   Fritzsche, Wolfgang ^a   Henkel, Thomas ^a   Möller, Robert ^a,c   Werres, Sabine ^b  

^a LEIBNIZ INSTITUTE OF PHOTONIC TECHNOLOGY   (Germany)

^b INSTITUTE FOR EPIDEMIOLOGY AND PATHOGEN DIAGNOSTICS   (Germany)

^c FRIEDRICH SCHILLER UNIVERSITY JENA   (Germany)

Author keywords

Detection; Diagnosis; Lab on a chip system; Microarray; PCR; Phytophthora

Indexed keywords

CATALYZATION; CONTROL METHODS; DETECTION; ELECTRICAL DETECTION; ELECTRICAL MEASUREMENT; GREY SCALE; LAB-ON-A-CHIP DEVICES; LAB-ON-A-CHIP SYSTEMS; MICRO-CHAMBERS; PCR; PELTIER ELEMENTS; PHYTOPHTHORA; PLANT PATHOGEN; PLANT PATHOLOGY; PORTABLE SYSTEM; POWER SUPPLY; PYTHIUM; SILVER DEPOSITION; SINGLE CHIPS; TWO-COMPONENT;

ELECTRIC POWER SYSTEMS; LABORATORIES;

POLYMERASE CHAIN REACTION;

SILVER;

ARTICLE; CONTROLLED STUDY; ENZYME MECHANISM; HYBRIDIZATION; LAB ON A CHIP; MICROARRAY ANALYSIS; NONHUMAN; NUCLEIC ACID ANALYSIS; PHYTOPHTHORA; PHYTOPHTHORA CINNAMOMI; PHYTOPHTHORA KERNOVIAE; PHYTOPHTHORA LATERALIS; PHYTOPHTHORA OLIGANDRUM; PHYTOPHTHORA PLURIVORA; PHYTOPHTHORA RAMORUM; PHYTOPHTHORA ULTIMUM; PLANT DISEASE; POLYMERASE CHAIN REACTION; POWER SUPPLY; SENSITIVITY AND SPECIFICITY; SIGNAL PROCESSING; SPECIES DIFFERENCE; TEMPERATURE;

BASE SEQUENCE; DNA PRIMERS; EQUIPMENT DESIGN; LAB-ON-A-CHIP DEVICES; PHYTOPHTHORA; PLANT DISEASES; PLANTS; POLYMERASE CHAIN REACTION; SPECIES SPECIFICITY;

PHYTOPHTHORA; PYTHIUM;

EID: 79956366441     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2011.03.035     Document Type: Article

References (44)

1. Bhattacharya S., Gao Y.F., Korampally V., Othman M.T., Grant S.A., Kleiboeker S.B., Gangopadhyay K., Gangopadhyay S. J. Microelectromech. Syst. 2007, 16(2):401-410.
2. Blair J.E., Coffey M.D., Park S.Y., Geiser D.M., Kang S. Fungal Genet. Biol. 2008, 45(3):266-277.
3. Britten R.J Science 1963, 142:963-965.
4. Cady N.C., Stelick S., Kunnavakkam M.V., Batt C.A. Sens. Actuators B 2005, 107(1):332-341.
5. El-Ali J., Perch-Nielsen I.R., Poulsen C.R., Bang D.D., Telleman P., Wolff A. Sens. Actuators A 2004, 110(1-3):3-10.
6. Erwin D.C., Ribeiro O.K. Phytophthora Diseases Worldwide 1996, APS Press, The American Phytopathological Society, St. Paul, Minnesota, USA, ISBN 0-89054-212-0.
7. Felbel J., Reichert A., Kielpinski M., Urban M., Haefner N., Duerst M., Koehler J.M., Weber J., Henkel T. Eng. Life Sci. 2008, 8(1):68-72.
8. Figeys D., Pinto D. Anal. Chem. 2000, 72(9):330A-335A.
9. Guttenberg Z., Mueller H., Habermueller H., Geisbauer A., Pipper J., Felbel J., Kielpinski M., Scriba J., Wixforth A. Lab Chip 2005, 5(3):308-317.
10. Haeberle S., Zengerle R. Lab Chip 2007, 7(9):1094-1110.
11. Hayden K.J., Rizzo D., Tse J., Garbelotto M. Phytopathology 2004, 94(10):1075-1083.
12. Heid C.A., Stevens J., Livak K.J., Williams P.M. Genome Res. 1996, 6(10):986-994.
13. Hughes K.J.D., Tomlinson J.A., Griffin R.L., Boonham N., Inman A.J., Lane C.R. Phytopathology 2006, 96(9):975-981.
14. Kirchner S., Kramer K.M., Schulze M., Pauly D., Jacob D., Gessler F., Nitsche A., Dorner B.G., Dorner M.B. Appl. Environ. Microbiol. 2010, 76(13):4387-4395.
15. Kopp M.U., de Mello A.J., Manz A. Science 1998, 280(5366):1046-1048.
16. Kricka L.J. Clin. Chim. Acta 2001, 307(1-2):219-223.
17. Lee D.S., Park S.H., Yang H.S., Chung K.H., Yoon T.H., Kim S.J., Kim K., Kim Y.T. Lab Chip 2004, 4(4):401-407.
18. Liu R.H., Yang J.N., Lenigk R., Bonanno J., Grodzinski P. Anal. Chem. 2004, 76(7):1824-1831.
19. Lund-Olesen T., Dufva M., Dahl J.A., Collas P., Hansen M.F. Biomed. Microdevices 2008, 10(6):769-776.
20. Martin F.N., Coffey M.D., Zeller K., Hamelin R.C., Tooley P., Garbelotto M., Hughes K.J.D., Kubisiak T., Bilodeau G.J., Levy L., Blomquist C., Berger P.H. Phytopathology 2009, 99(4):390-403.
21. Mark D., Haeberle S., Roth G., von Stetten F., Zengerle R. Chem. Soc. Rev. 2010, 39(3):1153-1182.
22. Matsubara Y., Kerman K., Kobayashi M., Yamamura S., Morita Y., Tamiya E. Biosens. Bioelectron. 2005, 20(8):1482-1490.
23. Möller R., Schüler T., Gunther S., Carlsohn M.R., Munder T., Fritzsche W. Appl. Microbiol. Biotechnol. 2008, 77(5):1181-1188.
24. Mullis K.B., Faloona F.A. Methods Enzymol 1987, 155:335-350.
25. Nagai H., Murakami Y., Morita Y., Yokoyama K., Tamiya E. Anal. Chem. 2001, 73(5):1043-1047.
26. Nagl S., Schaeferling M., Wolfbeis O.S. Microchim. Acta 2005, 151(1-2):1-21.
27. Nicklas J.A., Buel E. J. Forensic Sci. 2008, 53(6):1316-1324.
28. Pipper J., Inoue M., Ng L.F.P., Neuzil P., Zhang Y., Novak L. Nat. Med. 2007, 13(10):1259-1263.
29. Pjescic I., Tranter C., Hindmarsh P.L., Crews N.D. Biomed. Microdevices 2010, 12(2):333-343.
30. Reichert A., Felbel J., Kielpinski M., Urban M., Steinbrecht B., Henkel T. J. Bionic Eng. 2008, 5(4):291-298.
31. Saiki R.K., Bugawan T.L., Horn G.T., Mullis K.B., Erlich H.A. Nature 1986, 324(6093):163-166.
32. Schena M., Heller R.A., Theriault T.P., Konrad K., Lachenmeier E., Davis R.W. Trends Biotechnol. 1998, 16(7):301-306.
33. Schena M., Shalon D., Davis R.W., Brown P.O. Science 1995, 270(5235):467-470.
34. Schena L., Hughes K.J.D., Cooke D.E.L. Mol. Plant Pathol. 2006, 7(5):365-379.
35. Schneegaß I., Brautigam R., Köhler J.M. Lab Chip 2001, 1(1):42-49.
36. Schüler T., Kretschmer R., Jessing S., Urban M., Fritzsche W., Möller R., Popp J. Biosens. Bioelectron. 2009, 25(1):15-21.
37. Takahashi M., Ogino T., Baba K. Biochim. Biophys. Acta 1969, 174(1):183-187.
38. Ueda M., Nakanishi H., Tabata O., Baba Y. Mater. Sci. Eng.: C 2000, 12(1-2):33-36.
39. Waters L.C., Jacobson S.C., Kroutchinina N., Khandurina J., Foote R.S., Ramsey J.M. Anal. Chem. 1998, 70(24):5172-5176.
40. Werres S., Marwitz R., Man Inót Veld W.A., De Cock A.W.A.M., Bonants P.J.M., De Weerdt M., Themann K., Ilieva E., Baayen R.P. Mycol. Res. 2001, 105:1155-1165.
41. West J., Karamata B., Lillis B., Gleeson J.P., Alderman J., Collins J.K., Lane W., Mathewson A., Berney H. Lab Chip 2002, 2(4):224-230.
42. White T.J., Bruns T., Lee S., Taylor J. PCR Protocols: a Guide to Methods and Applications 1999, 315-322. New York Academic press. M.A. Innis, D.H. Gelfand, J.J. Sninsky, T.J. White (Eds.).
43. Wilding P., Shoffner M.A., Kricka L.J. Clin. Chem. 1994, 40(9):1815-1818.
44. Xiang Q., Xu B., Li D. Biomed. Microdevices 2007, 9(4):443-449.