Advanced glycation end product recognition by the receptor for AGEs

Structure

Volumn 19, Issue 5, 2011, Pages 722-732

  Xue, Jing ^a   Rai, Vivek ^b   Singer, David ^c   Chabierski, Stefan ^c   Xie, Jingjing ^d   Reverdatto, Sergey ^a   Burz, David S ^a   Schmidt, Ann Marie ^b   Hoffmann, Ralf ^c   Shekhtman, Alexander ^a  

^a STATE UNIVERSITY OF NEW YORK   (United States)

^b NEW YORK UNIVERSITY MEDICAL CENTER   (United States)

^c UNIVERSITY OF LEIPZIG   (Germany)

^d NANJING TECH UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

6 N CARBOXYMETHYLLYSINE; ADVANCED GLYCATION END PRODUCT; ADVANCED GLYCATION END PRODUCT RECEPTOR; DICARBOXYLIC AMINO ACID; N EPSILON CARBOXYETHYLLYSINE; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ANIMAL CELL; ARTICLE; BINDING AFFINITY; COMPLEX FORMATION; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN GLYCOSYLATION; PROTEIN MODIFICATION; PROTEIN STRUCTURE; RAT;

ALZHEIMER DISEASE; AMINO ACID SEQUENCE; BINDING SITES; BLOOD PROTEINS; CLONING, MOLECULAR; DIABETES MELLITUS; DIPEPTIDES; ESCHERICHIA COLI; GLYCOSYLATION; GLYCOSYLATION END PRODUCTS, ADVANCED; INFLAMMATION; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NEOPLASMS; PROTEIN CONFORMATION; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, IMMUNOLOGIC; RECOMBINANT PROTEINS;

EID: 79955825348     PISSN: 09692126     EISSN: 18784186     Source Type: Journal    
DOI: 10.1016/j.str.2011.02.013     Document Type: Article

References (51)

1. E. Atherton, H. Fox, D. Harkiss, and R.C. Sheppard J. Chem. Soc. Chem. Commun. 1978 537 539
2. P. Bork, L. Holm, and C. Sander The immunoglobulin fold. Structural classification, sequence patterns and common core J. Mol. Biol. 242 1994 309 320
3. J. Brett, A.M. Schmidt, Y.S. Zou, S.D. Yan, E. Weidman, D. Pinsky, M. Neeper, M. Przysiecki, A. shaw, A. Migheli, and D. Stern Tissue distribution of the receptor for advanced glycation end products (RAGE): expression in smooth muscle, cardiac myocyte, and neural tissue in addition to vasculature Am. J. Pathol. 143 1993 1699 1712
4. M. Brownlee Advanced protein glycosylation in diabetes and aging Annu. Rev. Med. 46 1995 223 234
5. M. Brownlee, H. Vlassara, and A. Cerami Nonenzymatic glycosylation and the pathogenesis of diabetic complications Ann. Intern. Med. 101 1984 527 537 (Pubitemid 14018054)
6. J. Cavanagh, W.J. Fairbrother, A.G. Palmer, and N.J. Skelton Protein NMR Spectroscopy: Principles and Practice 1996 Academic Press San Diego
7. T. Chavakis, A. Bierhaus, N. Al-Fakhri, D. Schneider, S. Witte, T. Linn, M. Nagashima, J. Morser, B. Arnold, K.T. Preissner, and P.P. Nawroth The pattern recognition receptor (RAGE) is a counterreceptor for leukocyte integrins: a novel pathway for inflammatory cell recruitment J. Exp. Med. 198 2003 1507 1515 (Pubitemid 37467165)
8. C. Chothia, and E.Y. Jones The molecular structure of cell adhesion molecules Annu. Rev. Biochem. 66 1997 823 862 (Pubitemid 27274676)
9. G. Cornilescu, F. Delaglio, and A. Bax Protein backbone angle restraints from searching a database for chemical shift and sequence homology J. Biomol. NMR 13 1999 289 302 (Pubitemid 29143535)
10. B.M. Dattilo, G. Fritz, E. Leclerc, C.W. Kooi, C.W. Heizmann, and W.J. Chazin The extracellular region of the receptor for advanced glycation end products is composed of two independent structural units Biochemistry 46 2007 6957 6970 (Pubitemid 46906424)
11. M.R. Eftink Fluorescence methods for studying equilibrium macromolecule-ligand interactions Methods Enzymol. 278 1997 221 257 (Pubitemid 27229922)
12. F. Ferrage, M. Zoonens, D.E. Warschawski, J.L. Popot, and G. Bodenhausen Slow diffusion of macromolecular assemblies by a new pulsed field gradient NMR method J. Am. Chem. Soc. 125 2003 2541 2545 (Pubitemid 36512241)
13. R. Fogh, J. Ionides, E. Ulrich, W. Boucher, W. Vranken, J.P. Linge, M. Habeck, W. Rieping, T.N. Bhat, and J. Westbrook The CCPN project: an interim report on a data model for the NMR community Nat. Struct. Biol. 9 2002 416 418 (Pubitemid 34568784)
14. N. Guex, and M.C. Peitsch SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling Electrophoresis 18 1997 2714 2723 (Pubitemid 28059943)
15. P. Guntert Automated NMR structure calculation with CYANA Methods Mol. Biol. 278 2004 353 378
16. A.F. Habeeb Determination of free amino groups in proteins by trinitrobenzenesulfonic acid Anal. Biochem. 14 1966 328 336
17. M.A. Hofmann, S. Drury, C. Fu, W. Qu, A. Taguchi, Y. Lu, C. Avila, N. Kambham, A. Bierhaus, and P. Nawroth RAGE mediates a novel proinflammatory axis: a central cell surface receptor for S100/calgranulin polypeptides Cell 97 1999 889 901 (Pubitemid 29375048)
18. O. Hori, J. Brett, T. Slattery, R. Cao, J. Zhang, J.X. Chen, M. Nagashima, E.R. Lundh, S. Vijay, and D. Nitecki The receptor for advanced glycation end products (RAGE) is a cellular binding site for amphoterin. Mediation of neurite outgrowth and co-expression of rage and amphoterin in the developing nervous system J. Biol. Chem. 270 1995 25752 25761
19. H. Ishiguro, N. Nakaigawa, Y. Miyoshi, K. Fujinami, Y. Kubota, and H. Uemura Receptor for advanced glycation end products (RAGE) and its ligand, amphoterin are overexpressed and associated with prostate cancer development Prostate 64 2005 92 100 (Pubitemid 40734743)
20. J. Iwahara, J.M. Wojciak, and R.T. Clubb Improved NMR spectra of a protein-DNA complex through rational mutagenesis and the application of a sensitivity optimized isotope-filtered NOESY experiment J. Biomol. NMR 19 2001 231 241 (Pubitemid 32288262)
21. T. Kislinger, C. Fu, B. Huber, W. Qu, A. Taguchi, S. Du Yan, M. Hofmann, S.F. Yan, M. Pischetsrieder, D. Stern, and A.M. Schmidt N(epsilon)- (carboxymethyl)lysine adducts of proteins are ligands for receptor for advanced glycation end products that activate cell signaling pathways and modulate gene expression J. Biol. Chem. 274 1999 31740 31749
22. M. Koch, S. Chitayat, B.M. Datillo, A. Schiefner, J. Diez, W. Chazin, and G. Fritz Structural Basis for Ligand recognition and activation of RAGE Structure 18 2010 1342 1352
23. R. Koradi, M. Billeter, and K. Wuthrich MOLMOL: a program for display and analysis of macromolecular structures J. Mol. Graph. 14 1996 51 55 (Pubitemid 26152976)
24. R.A. Laskowski, J.A. Rullmannn, M.W. MacArthur, R. Kaptein, and J.M. Thornton AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR J. Biomol. NMR 8 1996 477 486 (Pubitemid 126706801)
25. E. Leclerc, G. Fritz, M. Weibel, C.W. Heizmann, and A. Galichet S100B and S100A6 differentially modulate cell survival by interacting with distinct RAGE (receptor for advanced glycation end products) immunoglobulin domains J. Biol. Chem. 282 2007 31317 31331 (Pubitemid 350044892)
26. J.E. Masse, and R. Keller AutoLink: automated sequential resonance assignment of biopolymers from NMR data by relative-hypothesis-prioritization- based simulated logic J. Magn. Reson. 174 2005 133 151 (Pubitemid 40423617)
27. S. Matsumoto, T. Yoshida, H. Murata, S. Harada, N. Fujita, S. Nakamura, Y. Yamamoto, T. Watanabe, H. Yonekura, and H. Yamamoto Solution structure of the variable-type domain of the receptor for advanced glycation end products: new insight into AGE-RAGE interaction Biochemistry 47 2008 12299 12311
28. M. Neeper, A.M. Schmidt, J. Brett, S.D. Yan, F. Wang, Y.C. Pan, K. Elliston, D. Stern, and A. Shaw Cloning and expression of a cell surface receptor for advanced glycosylation end products of proteins J. Biol. Chem. 267 1992 14998 15004
29. T. Nogi, T. Sangawa, S. Tabata, M. Nagae, K. Tamura-Kawakami, A. Beppu, M. Hattori, N. Yasui, and J. Takagi Novel affinity tag system using structurally defined antibody-tag interaction: application to single-step protein purification Protein Sci. 17 2008 2120 2126
30. T. Ostendorp, E. Leclerc, A. Galichet, M. Koch, N. Demling, B. Weigle, C.W. Heizmann, P.M. Kroneck, and G. Fritz Structural and functional insights into RAGE activation by multimeric S100B EMBO J. 26 2007 3868 3878 (Pubitemid 47295872)
31. S.J. Perkins, and K. Wuthrich Ring current effects in the conformation-dependent NMR chemical shifts of aliphatic protons in the basic pancreatic trypsin inhibitor Biochim. Biophys. Acta 576 1979 409 423
32. J.F. Povey, M.J. Howard, R.A. Williamson, and C.M. Smales The effect of peptide glycation on local secondary structure J. Struct. Biol. 161 2008 151 161
33. R. Ramasamy, S.J. Vannucci, S.S. Yan, K. Herold, S.F. Yan, and A.M. Schmidt Advanced glycation end products and RAGE: a common thread in aging, diabetes, neurodegeneration, and inflammation Glycobiology 15 2005 16R 28R (Pubitemid 41417992)
34. R. Ramasamy, S.F. Yan, and A.M. Schmidt The RAGE axis and endothelial dysfunction: maladaptive roles in the diabetic vasculature and beyond Trends Cardiovasc. Med. 15 2005 237 243 (Pubitemid 41437905)
35. P.R. Schimmel, and C.R. Cantor Biophysical Chemistry: PartII; techniques for the Study of Biologycal Structure and Function 1980 W.H. Freeman New York
36. A.M. Schmidt, and D.M. Stern Receptor for age (RAGE) is a gene within the major histocompatibility class III region: implications for host response mechanisms in homeostasis and chronic disease Front. Biosci. 6 2001 D1151 D1160
37. A.M. Schmidt, O. Hori, J.X. Chen, J.F. Li, J. Crandall, J. Zhang, R. Cao, S.D. Yan, J. Brett, and D. Stern Advanced glycation endproducts interacting with their endothelial receptor induce expression of vascular cell adhesion molecule-1 (VCAM-1) in cultured human endothelial cells and in mice. A potential mechanism for the accelerated vasculopathy of diabetes J. Clin. Invest. 96 1995 1395 1403
38. A.M. Schmidt, O. Hori, R. Cao, S.D. Yan, J. Brett, J.L. Wautier, S. Ogawa, K. Kuwabara, M. Matsumoto, and D. Stern RAGE: a novel cellular receptor for advanced glycation end products Diabetes 45 Suppl 3 1996 S77 S80
39. A.M. Schmidt, M. Hofmann, A. Taguchi, S.D. Yan, and D.M. Stern RAGE: a multiligand receptor contributing to the cellular response in diabetic vasculopathy and inflammation Semin. Thromb. Hemost. 26 2000 485 493
40. A.W. Schuttelkopf, and D.M. van Aalten PRODRG: a tool for high-throughput crystallography of protein-ligand complexes Acta Crystallogr. D Biol. Crystallogr. 60 2004 1355 1363 (Pubitemid 41079731)
41. K. Sugaya, T. Fukagawa, K. Matsumoto, K. Mita, E. Takahashi, A. Ando, H. Inoko, and T. Ikemura Three genes in the human MHC class III region near the junction with the class II: gene for receptor of advanced glycosylation end products, PBX2 homeobox gene and a notch homolog, human counterpart of mouse mammary tumor gene int-3 Genomics 23 1994 408 419 (Pubitemid 24308262)
42. A. Taguchi, D.C. Blood, G. del Toro, A. Canet, D.C. Lee, W. Qu, N. Tanji, Y. Lu, E. Lalla, and C. Fu Blockade of RAGE-amphoterin signalling suppresses tumour growth and metastases Nature 405 2000 354 360 (Pubitemid 30337069)
43. P.J. Thornalley Cell activation by glycated proteins. AGE receptors, receptor recognition factors and functional classification of AGEs Cell. Mol. Biol. (Noisy-le-grand) 44 1998 1013 1023
44. P.J. Thornalley Clinical significance of glycation Clin. Lab. 45 1999 263 273
45. P.J. Thornalley, S. Battah, N. Ahmed, N. Karachalias, S. Agalou, R. Babaei-Jadidi, and A. Dawnay Quantitative screening of advanced glycation endproducts in cellular and extracellular proteins by tandem mass spectrometry Biochem. J. 375 2003 581 592 (Pubitemid 37433506)
46. T. Valente, A. Gella, X. Fernandez-Busquets, M. Unzeta, and N. Durany Immunohistochemical analysis of human brain suggests pathological synergism of Alzheimer's disease and diabetes mellitus Neurobiol. Dis. 37 2010 67 76
47. C. Wa, R.L. Cerny, W.A. Clarke, and D.S. Hage Characterization of glycation adducts on human serum albumin by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry Clin. Chim. Acta 385 2007 48 60 (Pubitemid 47374666)
48. J. Xie, D.S. Burz, W. He, I.B. Bronstein, I. Lednev, and A. Shekhtman Hexameric calgranulin C (S100A12) binds to the receptor for advanced glycated end products (RAGE) using symmetric hydrophobic target-binding patches J. Biol. Chem. 282 2007 4218 4231 (Pubitemid 47084493)
49. J. Xie, S. Reverdatto, A. Frolov, R. Hoffmann, D.S. Burz, and A. Shekhtman Structural basis for pattern recognition by the receptor for advanced glycation end products (RAGE) J. Biol. Chem. 283 2008 27255 27269
50. H. Zong, A. Madden, M. Ward, M.H. Mooney, C.T. Elliott, and A.W. Stitt Homodimerization is essential for the receptor for advanced glycation end products (RAGE)-mediated signal transduction J. Biol. Chem. 285 2010 23137 23146
51. C. Zwahlen, P. Legault, S.J.F. Vincent, J. Greenblatt, R. Konrat, and L.E. Kay Methods for measurement of intermolecular NOEs by multinuclear NMR spectroscopy: application to a bacteriophage λ N-peptide/boxB RNA complex J. Am. Chem. Soc. 119 1997 6711 6721 (Pubitemid 27343493)