-
1
-
-
0026326053
-
Genetic and developmental control of anthocyanin biosynthesis
-
Dooner H.K., Robbins T.P., Jorgensen R.A. Genetic and developmental control of anthocyanin biosynthesis. Annu Rev Genet 1991, 25:173-199.
-
(1991)
Annu Rev Genet
, vol.25
, pp. 173-199
-
-
Dooner, H.K.1
Robbins, T.P.2
Jorgensen, R.A.3
-
2
-
-
3042801584
-
Chromatin conversations: mechanisms and implications of paramutation
-
Chandler V.L., Stam M. Chromatin conversations: mechanisms and implications of paramutation. Nat Rev Genet 2004, 5:532-544.
-
(2004)
Nat Rev Genet
, vol.5
, pp. 532-544
-
-
Chandler, V.L.1
Stam, M.2
-
3
-
-
78049386260
-
Paramutation and development
-
Hollick J.B. Paramutation and development. Annu Rev Cell Dev Biol 2010, 26:557-579.
-
(2010)
Annu Rev Cell Dev Biol
, vol.26
, pp. 557-579
-
-
Hollick, J.B.1
-
4
-
-
33745319337
-
RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse
-
Rassoulzadegan M., Grandjean V., Gounon P., Vincent S., Gillot I., Cuzin F. RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse. Nature 2006, 441:469-474.
-
(2006)
Nature
, vol.441
, pp. 469-474
-
-
Rassoulzadegan, M.1
Grandjean, V.2
Gounon, P.3
Vincent, S.4
Gillot, I.5
Cuzin, F.6
-
5
-
-
72449147366
-
Paramutation: the tip of an epigenetic iceberg?
-
Suter C.M., Martin D.I. Paramutation: the tip of an epigenetic iceberg?. Trends Genet 2010, 26:9-14.
-
(2010)
Trends Genet
, vol.26
, pp. 9-14
-
-
Suter, C.M.1
Martin, D.I.2
-
6
-
-
77953807770
-
Repeat elements and the Arabidopsis DNA methylation landscape
-
Teixeira F.K., Colot V. Repeat elements and the Arabidopsis DNA methylation landscape. Heredity 2010, 105:14-23.
-
(2010)
Heredity
, vol.105
, pp. 14-23
-
-
Teixeira, F.K.1
Colot, V.2
-
7
-
-
58449134534
-
Small silencing RNAs: an expanding universe
-
Ghildiyal M., Zamore P.D. Small silencing RNAs: an expanding universe. Nat Rev Genet 2009, 10:94-108.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 94-108
-
-
Ghildiyal, M.1
Zamore, P.D.2
-
8
-
-
57149104113
-
An epigenetic role for maternally inherited piRNAs in transposon silencing
-
Brennecke J., Malone C.D., Aravin A.A., Sachidanandam R., Stark A., Hannon G.J. An epigenetic role for maternally inherited piRNAs in transposon silencing. Science 2008, 322:1387-1392.
-
(2008)
Science
, vol.322
, pp. 1387-1392
-
-
Brennecke, J.1
Malone, C.D.2
Aravin, A.A.3
Sachidanandam, R.4
Stark, A.5
Hannon, G.J.6
-
9
-
-
59349118366
-
Epigenetic reprogramming and small RNA silencing of transposable elements in pollen
-
Slotkin R.K., Vaughn M.W., Borges F., Tanurdzic M., Becker J.D., Feijó J.A., Martienssen R. Epigenetic reprogramming and small RNA silencing of transposable elements in pollen. Cell 2009, 136:461-472.
-
(2009)
Cell
, vol.136
, pp. 461-472
-
-
Slotkin, R.K.1
Vaughn, M.W.2
Borges, F.3
Tanurdzic, M.4
Becker, J.D.5
Feijó, J.A.6
Martienssen, R.7
-
10
-
-
61349107326
-
RNA polymerase IV functions in paramutation in Zea mays
-
Erhard K.F., Stonaker J.L., Parkinson S.E., Lim J.P., Hale C.J., Hollick J.B. RNA polymerase IV functions in paramutation in Zea mays. Science 2009, 323:1201-1205.
-
(2009)
Science
, vol.323
, pp. 1201-1205
-
-
Erhard, K.F.1
Stonaker, J.L.2
Parkinson, S.E.3
Lim, J.P.4
Hale, C.J.5
Hollick, J.B.6
-
11
-
-
73649111706
-
Diversity of Pol IV function is defined by mutations at the maize rmr7 locus
-
Stonaker J.L., Lim J.P., Erhard K.F., Hollick J.B. Diversity of Pol IV function is defined by mutations at the maize rmr7 locus. PLoS Genet 2009, 5:e1000706.
-
(2009)
PLoS Genet
, vol.5
-
-
Stonaker, J.L.1
Lim, J.P.2
Erhard, K.F.3
Hollick, J.B.4
-
12
-
-
73649130942
-
A dominant mutation in mediator of paramutation2, one of three second-largest subunits of a plant-specific RNA polymerase, disrupts multiple siRNA silencing processes
-
Sidorenko L., Dorweiler J.E., Cigan A.M., Arteaga-Vazquez M., Vyas M., Kermicle J., Jurcin D., Brzeski J., Cai Y., Chandler V.L. A dominant mutation in mediator of paramutation2, one of three second-largest subunits of a plant-specific RNA polymerase, disrupts multiple siRNA silencing processes. PLoS Genet 2009, 5:e1000725.
-
(2009)
PLoS Genet
, vol.5
-
-
Sidorenko, L.1
Dorweiler, J.E.2
Cigan, A.M.3
Arteaga-Vazquez, M.4
Vyas, M.5
Kermicle, J.6
Jurcin, D.7
Brzeski, J.8
Cai, Y.9
Chandler, V.L.10
-
13
-
-
31544440125
-
Rmr6 maintains meiotic inheritance of paramutant states in Zea mays
-
Hollick J.B., Kermicle J.L., Parkinson S.E. Rmr6 maintains meiotic inheritance of paramutant states in Zea mays. Genetics 2005, 171:725-740.
-
(2005)
Genetics
, vol.171
, pp. 725-740
-
-
Hollick, J.B.1
Kermicle, J.L.2
Parkinson, S.E.3
-
14
-
-
35648945855
-
A novel Snf2 protein maintains trans-generational regulatory states established by paramutation in maize
-
Hale C.J., Stonaker J.L., Gross S.M., Hollick J.B. A novel Snf2 protein maintains trans-generational regulatory states established by paramutation in maize. PloS Biol 2007, 5:2156-2165.
-
(2007)
PloS Biol
, vol.5
, pp. 2156-2165
-
-
Hale, C.J.1
Stonaker, J.L.2
Gross, S.M.3
Hollick, J.B.4
-
15
-
-
70149109627
-
Production and processing of siRNA precursor transcripts from the highly repetitive maize genome
-
Hale C., Erhard K., Lisch D., Hollick J. Production and processing of siRNA precursor transcripts from the highly repetitive maize genome. PloS Genet 2009, 5:e1000598.
-
(2009)
PloS Genet
, vol.5
-
-
Hale, C.1
Erhard, K.2
Lisch, D.3
Hollick, J.4
-
16
-
-
33746363573
-
An RNA-dependent RNA polymerase is required for paramutation in maize
-
Alleman M., Sidorenko L., McGinnis K., Seshadri V., Dorweiler J.E., White J., Sikkink K., Chandler V.L. An RNA-dependent RNA polymerase is required for paramutation in maize. Nature 2006, 442:295-298.
-
(2006)
Nature
, vol.442
, pp. 295-298
-
-
Alleman, M.1
Sidorenko, L.2
McGinnis, K.3
Seshadri, V.4
Dorweiler, J.E.5
White, J.6
Sikkink, K.7
Chandler, V.L.8
-
17
-
-
77955482238
-
Paramutation in maize: RNA mediated trans-generational gene silencing
-
Arteaga-Vazquez M.A., Chandler V.L. Paramutation in maize: RNA mediated trans-generational gene silencing. Curr Opin Genet Dev 2010, 20:156-163.
-
(2010)
Curr Opin Genet Dev
, vol.20
, pp. 156-163
-
-
Arteaga-Vazquez, M.A.1
Chandler, V.L.2
-
18
-
-
77955601269
-
RNA-mediated trans-communication can establish paramutation at the b1 locus in maize
-
Arteaga-Vazquez M.A., Sidorenko L., Rabanal F.A., Shrivistava R., Nobuta K., Green P.J., Meyers B.C., Chandler V.L. RNA-mediated trans-communication can establish paramutation at the b1 locus in maize. Proc Natl Acad Sci USA 2010, 107:12986-12991.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 12986-12991
-
-
Arteaga-Vazquez, M.A.1
Sidorenko, L.2
Rabanal, F.A.3
Shrivistava, R.4
Nobuta, K.5
Green, P.J.6
Meyers, B.C.7
Chandler, V.L.8
-
19
-
-
0034353111
-
Mediator of paramutation1 is required for establishment and maintenance of paramutation at multiple maize loci
-
Dorweiler J.E., Carey C.C., Kubo K.M., Hollick J.B., Kermicle J.L., Chandler V.L. mediator of paramutation1 is required for establishment and maintenance of paramutation at multiple maize loci. Plant Cell 2000, 12:2101-2118.
-
(2000)
Plant Cell
, vol.12
, pp. 2101-2118
-
-
Dorweiler, J.E.1
Carey, C.C.2
Kubo, K.M.3
Hollick, J.B.4
Kermicle, J.L.5
Chandler, V.L.6
-
20
-
-
50049120478
-
Study of an RNA helicase implicates small RNA-noncoding RNA interactions in programmed DNA elimination in Tetrahymena
-
Aronica L., Bednenko J., Noto T., DeSouza L.V., Siu K.W., Loidl J., Pearlman R.E., Gorovsky M.A., Mochizuki K. Study of an RNA helicase implicates small RNA-noncoding RNA interactions in programmed DNA elimination in Tetrahymena. Genes Dev 2008, 22:2228-2241.
-
(2008)
Genes Dev
, vol.22
, pp. 2228-2241
-
-
Aronica, L.1
Bednenko, J.2
Noto, T.3
DeSouza, L.V.4
Siu, K.W.5
Loidl, J.6
Pearlman, R.E.7
Gorovsky, M.A.8
Mochizuki, K.9
-
21
-
-
77952379691
-
Small RNA duplexes function as mobile silencing signals between plant cells
-
Dunoyer P., Schott G., Himber C., Meyer D., Takeda A., Carrington J.C., Voinnet O. Small RNA duplexes function as mobile silencing signals between plant cells. Science 2010, 328:912-916.
-
(2010)
Science
, vol.328
, pp. 912-916
-
-
Dunoyer, P.1
Schott, G.2
Himber, C.3
Meyer, D.4
Takeda, A.5
Carrington, J.C.6
Voinnet, O.7
-
22
-
-
77952403409
-
Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells
-
Molnar A., Melnyk C.W., Bassett A., Hardcastle T.J., Dunn R., Baulcombe D.C. Small silencing RNAs in plants are mobile and direct epigenetic modification in recipient cells. Science 2010, 328:872-875.
-
(2010)
Science
, vol.328
, pp. 872-875
-
-
Molnar, A.1
Melnyk, C.W.2
Bassett, A.3
Hardcastle, T.J.4
Dunn, R.5
Baulcombe, D.C.6
-
23
-
-
77950086568
-
Control of female gamete formation by a small RNA pathway in Arabidopsis
-
Olmedo-Monfil V., Durán-Figueroa N., Arteaga-Vázquez M., Demesa-Arévalo E., Autran D., Grimanelli D., Slotkin R.K., Martienssen R.A., Vielle-Calzada J. Control of female gamete formation by a small RNA pathway in Arabidopsis. Nature 2010, 464:628-632.
-
(2010)
Nature
, vol.464
, pp. 628-632
-
-
Olmedo-Monfil, V.1
Durán-Figueroa, N.2
Arteaga-Vázquez, M.3
Demesa-Arévalo, E.4
Autran, D.5
Grimanelli, D.6
Slotkin, R.K.7
Martienssen, R.A.8
Vielle-Calzada, J.9
-
24
-
-
0031660782
-
Epigenetic allelic states of a maize transcriptional regulatory locus exhibit overdominant gene action
-
Hollick J.B., Chandler V.L. Epigenetic allelic states of a maize transcriptional regulatory locus exhibit overdominant gene action. Genetics 1998, 150:891-897.
-
(1998)
Genetics
, vol.150
, pp. 891-897
-
-
Hollick, J.B.1
Chandler, V.L.2
-
25
-
-
34547660559
-
Maize sex determination and abaxial leaf fates are canalized by a factor that maintains repressed epigenetic states
-
Parkinson S.E., Gross S.M., Hollick J.B. Maize sex determination and abaxial leaf fates are canalized by a factor that maintains repressed epigenetic states. Dev Biol 2007, 308:462-473.
-
(2007)
Dev Biol
, vol.308
, pp. 462-473
-
-
Parkinson, S.E.1
Gross, S.M.2
Hollick, J.B.3
-
26
-
-
0029157760
-
Organization of paramutagenicity in R-stippled maize
-
Kermicle J.L., Eggleston W.B., Alleman M. Organization of paramutagenicity in R-stippled maize. Genetics 1995, 141:361-372.
-
(1995)
Genetics
, vol.141
, pp. 361-372
-
-
Kermicle, J.L.1
Eggleston, W.B.2
Alleman, M.3
-
27
-
-
0031916244
-
Paramutation of the r1 locus of maize is associated with increased cytosine methylation
-
Walker E.L. Paramutation of the r1 locus of maize is associated with increased cytosine methylation. Genetics 1998, 148:1973-1981.
-
(1998)
Genetics
, vol.148
, pp. 1973-1981
-
-
Walker, E.L.1
-
28
-
-
0032869706
-
The structure and paramutagenicity of the R-marbled haplotype of Zea mays
-
Panavas T., Weir J., Walker E.L. The structure and paramutagenicity of the R-marbled haplotype of Zea mays. Genetics 1999, 153:979-991.
-
(1999)
Genetics
, vol.153
, pp. 979-991
-
-
Panavas, T.1
Weir, J.2
Walker, E.L.3
-
29
-
-
0036682518
-
Differential chromatin structure within a tandem array 100kb upstream of the maize b1 locus is associated with paramutation
-
Stam M., Belele C., Dorweiler J.E., Chandler V.L. Differential chromatin structure within a tandem array 100kb upstream of the maize b1 locus is associated with paramutation. Genes Dev 2002, 16:1906-1918.
-
(2002)
Genes Dev
, vol.16
, pp. 1906-1918
-
-
Stam, M.1
Belele, C.2
Dorweiler, J.E.3
Chandler, V.L.4
-
30
-
-
0035093607
-
Transgene-induced silencing identifies sequences involved in the establishment of paramutation of the maize p1 gene
-
Sidorenko L.V., Peterson T. Transgene-induced silencing identifies sequences involved in the establishment of paramutation of the maize p1 gene. Plant Cell 2001, 13:319-335.
-
(2001)
Plant Cell
, vol.13
, pp. 319-335
-
-
Sidorenko, L.V.1
Peterson, T.2
-
31
-
-
55449131096
-
Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes
-
Wierzbicki A.T., Haag J.R., Pikaard C.S. Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes. Cell 2008, 135:635-648.
-
(2008)
Cell
, vol.135
, pp. 635-648
-
-
Wierzbicki, A.T.1
Haag, J.R.2
Pikaard, C.S.3
-
32
-
-
72849124237
-
Intergenic transcription by RNA polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis
-
Zheng B., Wang Z., Li S., Yu B., Liu J.Y., Chen X. Intergenic transcription by RNA polymerase II coordinates Pol IV and Pol V in siRNA-directed transcriptional gene silencing in Arabidopsis. Genes Dev 2009, 23:2850-2860.
-
(2009)
Genes Dev
, vol.23
, pp. 2850-2860
-
-
Zheng, B.1
Wang, Z.2
Li, S.3
Yu, B.4
Liu, J.Y.5
Chen, X.6
-
33
-
-
77950417414
-
Transgenic expression of CBBP, a CXC domain protein, establishes paramutation in maize
-
Brzeska K., Brzeski J., Smith J., Chandler V.L. Transgenic expression of CBBP, a CXC domain protein, establishes paramutation in maize. Proc Natl Acad Sci USA 2010, 107:5516-5521.
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 5516-5521
-
-
Brzeska, K.1
Brzeski, J.2
Smith, J.3
Chandler, V.L.4
-
34
-
-
77954891466
-
The role of DNA methylation, nucleosome occupancy and histone modifications in paramutation
-
Haring M., Bader R., Louwers M., Schwabe A., Van Driel R., Stam M. The role of DNA methylation, nucleosome occupancy and histone modifications in paramutation. Plant J 2010, 63:366-378.
-
(2010)
Plant J
, vol.63
, pp. 366-378
-
-
Haring, M.1
Bader, R.2
Louwers, M.3
Schwabe, A.4
Van Driel, R.5
Stam, M.6
-
35
-
-
0035678317
-
Structural features and methylation patterns associated with paramutation at the r1 locus of Zea mays
-
Walker E.L., Panavas T. Structural features and methylation patterns associated with paramutation at the r1 locus of Zea mays. Genetics 2001, 159:1201-1215.
-
(2001)
Genetics
, vol.159
, pp. 1201-1215
-
-
Walker, E.L.1
Panavas, T.2
-
36
-
-
0001402506
-
The properties, origin, and mechanism of conversion-type inheritance at the B locus in maize
-
Coe E.H. The properties, origin, and mechanism of conversion-type inheritance at the B locus in maize. Genetics 1966, 53:1035-1063.
-
(1966)
Genetics
, vol.53
, pp. 1035-1063
-
-
Coe, E.H.1
-
37
-
-
31344435650
-
DNA methylation and epigenetic inheritance during plant gametogenesis
-
Takeda S., Paszkowski J. DNA methylation and epigenetic inheritance during plant gametogenesis. Chromosoma 2006, 115:27-35.
-
(2006)
Chromosoma
, vol.115
, pp. 27-35
-
-
Takeda, S.1
Paszkowski, J.2
-
38
-
-
33947303168
-
Transposable elements and the epigenetic regulation of the genome
-
Slotkin R.K., Martienssen R. Transposable elements and the epigenetic regulation of the genome. Nat Rev Genet 2007, 8:272-285.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 272-285
-
-
Slotkin, R.K.1
Martienssen, R.2
-
39
-
-
73649140264
-
Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome
-
Baucom R.S., Estill J.C., Chaparro C., Upshaw N., Jogi A., Deragon J.M., Westerman R.P., Sanmiguel P.J., Bennetzen J.L. Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome. PLoS Genet 2009, 5:e1000732.
-
(2009)
PLoS Genet
, vol.5
-
-
Baucom, R.S.1
Estill, J.C.2
Chaparro, C.3
Upshaw, N.4
Jogi, A.5
Deragon, J.M.6
Westerman, R.P.7
Sanmiguel, P.J.8
Bennetzen, J.L.9
-
40
-
-
0029056232
-
Environmental programming of heritable epigenetic changes in paramutant r-gene expression using temperature and light at a specific stage of early development in maize seedlings
-
Mikula B.C. Environmental programming of heritable epigenetic changes in paramutant r-gene expression using temperature and light at a specific stage of early development in maize seedlings. Genetics 1995, 140:1379-1387.
-
(1995)
Genetics
, vol.140
, pp. 1379-1387
-
-
Mikula, B.C.1
-
41
-
-
29244490062
-
Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulates salt tolerance in Arabidopsis
-
Borsani O., Zhu J., Verslues P.E., Sunkar R., Zhu J.K. Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulates salt tolerance in Arabidopsis. Cell 2005, 123:1279-1291.
-
(2005)
Cell
, vol.123
, pp. 1279-1291
-
-
Borsani, O.1
Zhu, J.2
Verslues, P.E.3
Sunkar, R.4
Zhu, J.K.5
-
42
-
-
33845202133
-
A pathogen-inducible endogenous siRNA in plant immunity
-
Katiyar-Agarwal S., Morgan R., Dahlbeck D., Borsani O., Villegas A., Zhu J.K., Staskawicz B.J., Jin H. A pathogen-inducible endogenous siRNA in plant immunity. Proc Natl Acad Sci USA 2006, 103:18002-18007.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 18002-18007
-
-
Katiyar-Agarwal, S.1
Morgan, R.2
Dahlbeck, D.3
Borsani, O.4
Villegas, A.5
Zhu, J.K.6
Staskawicz, B.J.7
Jin, H.8
-
43
-
-
66449105851
-
Tissue- and expression level-specific chromatin looping at maize b1 epialleles
-
Louwers M., Bader R., Haring M., Van Driel R., De Laat W., Stam M. Tissue- and expression level-specific chromatin looping at maize b1 epialleles. Plant Cell 2009, 21:832-842.
-
(2009)
Plant Cell
, vol.21
, pp. 832-842
-
-
Louwers, M.1
Bader, R.2
Haring, M.3
Van Driel, R.4
De Laat, W.5
Stam, M.6
|