-
2
-
-
0032925848
-
Positional dependence, cliques, and predictive motifs in the bHLH protein domain
-
DOI 10.1007/PL00006494
-
WR Atchley W Terhalle A Dress 1999 Positional dependence, cliques, and predictive motifs in the bHLH protein domain J Mol Evol 5 501 516 10.1007/PL00006494 (Pubitemid 29211426)
-
(1999)
Journal of Molecular Evolution
, vol.48
, Issue.5
, pp. 501-516
-
-
Atchley, W.R.1
Terhalle, W.2
Dress, A.3
-
3
-
-
0027910469
-
Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain
-
AA Ferre-D'Amare GC Prendergast EB Ziff SK Burley 1993 Recognition by Max of its cognate DNA through a dimeric b/HLH/Z domain Nature 6424 38 45 10.1038/363038a0 (Pubitemid 23144958)
-
(1993)
Nature
, vol.362
, Issue.6424
, pp. 38-45
-
-
Ferre-D'Amare, A.R.1
Prendergast, G.C.2
Ziff, E.B.3
Burley, S.K.4
-
4
-
-
68949204393
-
Mesotocin and nonapeptide receptors promote estrildid flocking behavior
-
10.1126/science.1174929
-
JL Goodson SE Schrock JD Klatt D Kabelik MA Kingsbury 2009 Mesotocin and nonapeptide receptors promote estrildid flocking behavior Science 5942 862 866 10.1126/science.1174929
-
(2009)
Science
, vol.5942
, pp. 862-866
-
-
Goodson, J.L.1
Schrock, S.E.2
Klatt, J.D.3
Kabelik, D.4
Kingsbury, M.A.5
-
5
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
DOI 10.1080/10635150390235520
-
S Guindon O Gascuel 2003 A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood Syst Biol 5 696 704 10.1080/10635150390235520 (Pubitemid 37365050)
-
(2003)
Systematic Biology
, vol.52
, Issue.5
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
6
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
JP Huelsenbeck F Ronquist 2001 MrBayes: Bayesian inference of phylogenetic trees Bioinformatics 8 754 755 10.1093/bioinformatics/17.8.754 (Pubitemid 32851390)
-
(2001)
Bioinformatics
, vol.17
, Issue.8
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
8
-
-
0026691182
-
The rapid generation of mutation data matrices from protein sequences
-
10.1093/bioinformatics/8.3.275
-
DT Jones WR Taylor JM Thornton 1992 The rapid generation of mutation data matrices from protein sequences Bioinformatics 3 275 282 10.1093/ bioinformatics/8.3.275
-
(1992)
Bioinformatics
, vol.3
, pp. 275-282
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
9
-
-
0035001937
-
The basic helix-loop-helix protein family: Comparative genomics and phylogenetic analysis
-
DOI 10.1101/gr.177001
-
V Ledent M Vervoort 2001 The basic helix-loop-helix protein family: comparative genomics and phylogenetic analysis Genome Res 5 754 770 10.1101/gr.177001 (Pubitemid 32447861)
-
(2001)
Genome Research
, vol.11
, Issue.5
, pp. 754-770
-
-
Ledent, V.1
Vervoort, M.2
-
10
-
-
85059925514
-
Phylogenetic analysis of the human basic helix-loop-helix proteins
-
V Ledent O Paquet M Vervoort 2002 Phylogenetic analysis of the human basic helix-loop-helix proteins Genome Biol 6 301 3018
-
(2002)
Genome Biol
, vol.6
, pp. 301-3018
-
-
Ledent, V.1
Paquet, O.2
Vervoort, M.3
-
11
-
-
33749628461
-
Identification and analysis of the mouse basic/Helix-Loop-Helix transcription factor family
-
DOI 10.1016/j.bbrc.2006.09.114, PII S0006291X06021334
-
J Li Q Liu M Qiu Y Pan Y Li T Shi 2006 Identification and analysis of the mouse basic/helix-loop-helix transcription factor family Biochem Bioph Res Co 3 648 656 10.1016/j.bbrc.2006.09.114 (Pubitemid 44547896)
-
(2006)
Biochemical and Biophysical Research Communications
, vol.350
, Issue.3
, pp. 648-656
-
-
Li, J.1
Liu, Q.2
Qiu, M.3
Pan, Y.4
Li, Y.5
Shi, T.6
-
12
-
-
0033980393
-
Helix-loop-helix proteins: Regulators of transcription in eucaryotic organisms
-
DOI 10.1128/MCB.20.2.429-440.2000
-
ME Massari C Murre 2000 Helix-loop-helix proteins: regulators of transcription in eucaryotic organisms Mol Cell Biol 2 429 440 10.1128/MCB.20.2.429-440.2000 (Pubitemid 30023084)
-
(2000)
Molecular and Cellular Biology
, vol.20
, Issue.2
, pp. 429-440
-
-
Massari, M.E.1
Murre, C.2
-
13
-
-
0024554495
-
A new DNA binding and dimerization motif in immunoglobulin enhancer binding, daughterless, MyoD, and myc proteins
-
DOI 10.1016/0092-8674(89)90682-X
-
C Murre PS McCaw D Baltimore 1989 A new DNA binding and dimerization motif in immunoglobulin enhancer binding, daughterless, MyoD, and Myc proteins Cell 5 777 783 10.1016/0092-8674(89)90682-X (Pubitemid 19082513)
-
(1989)
Cell
, vol.56
, Issue.5
, pp. 777-783
-
-
Murre, C.1
Schonleber McCaw, P.2
Baltimore, D.3
-
16
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
DOI 10.1093/bioinformatics/btg180
-
F Ronquist JP Huelsenbeck 2003 MrBayes 3: Bayesian phylogenetic inference under mixed models Bioinformatics 12 1572 1574 10.1093/bioinformatics/btg180 (Pubitemid 37038874)
-
(2003)
Bioinformatics
, vol.19
, Issue.12
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
17
-
-
33947252158
-
Origin and diversification of the basic helix-loop-helix gene family in metazoans: Insights from comparative genomics
-
DOI 10.1186/1471-2148-7-33
-
E Simionato V Ledent G Richards M Thomas-Chollier P Kerner D Coornaert BM Degnan M Vervoort 2007 Origin and diversification of the basic helix-loop-helix gene family in metazoans: insights from comparative genomics BMC Evol Biol 7 33 17335570 10.1186/1471-2148-7-33 (Pubitemid 46434556)
-
(2007)
BMC Evolutionary Biology
, vol.7
, pp. 33
-
-
Simionato, E.1
Ledent, V.2
Richards, G.3
Thomas-Chollier, M.4
Kerner, P.5
Coornaert, D.6
Degnan, B.M.7
Vervoort, M.8
-
18
-
-
51849143838
-
A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution
-
18493078 10.1534/genetics.107.086264 1:STN:280:DC%2BD1czivFynug%3D%3D
-
J Stapley TR Birkhead T Burke J Slate 2008 A linkage map of the zebra finch Taeniopygia guttata provides new insights into avian genome evolution Genetics 179 651 667 18493078 10.1534/genetics.107.086264 1:STN:280: DC%2BD1czivFynug%3D%3D
-
(2008)
Genetics
, vol.179
, pp. 651-667
-
-
Stapley, J.1
Birkhead, T.R.2
Burke, T.3
Slate, J.4
-
19
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
DOI 10.1093/molbev/msm092
-
K Tamura J Dudley M Nei S Kumar 2007 Mega 4: Molecular evolutionary genetics analysis software version 4.0 Mol Biol Evol 8 1596 1599 10.1093/molbev/msm092 (Pubitemid 47236692)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.8
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
20
-
-
0031574072
-
The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
DOI 10.1093/nar/25.24.4876
-
JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The ClustalX Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res 24 4876 4882 10.1093/nar/25.24.4876 (Pubitemid 28022245)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
21
-
-
0042421751
-
The Arabidopsis basic/helix-loop-helix transcription factor family
-
DOI 10.1105/tpc.013839
-
G Toledo-Ortiz E Huq PH Quail 2003 The Arabidopsis basic/helix-loop-helix transcription factor family Plant Cell 8 1749 1770 10.1105/tpc.013839 (Pubitemid 37078332)
-
(2003)
Plant Cell
, vol.15
, Issue.8
, pp. 1749-1770
-
-
Toledo-Ortiz, G.1
Huq, E.2
Quail, P.H.3
-
22
-
-
35148836132
-
The basic helix-loop-helix transcription factor family in Bombyx mori
-
DOI 10.1007/s00427-007-0184-x
-
Y Wang KP Chen Q Yao WB Wang Z Zhu 2007 The basic helix-loop-helix transcription factor family in Bombyx mori Dev Genes Evol 217 715 723 17899178 10.1007/s00427-007-0184-x 1:CAS:528:DC%2BD2sXhtFejtbbI (Pubitemid 47543361)
-
(2007)
Development Genes and Evolution
, vol.217
, Issue.10
, pp. 715-723
-
-
Wang, Y.1
Chen, K.2
Yao, Q.3
Wang, W.4
Zhu, Z.5
-
23
-
-
67349144743
-
Phylogenetic analysis of zebrafish basic helix-loop-helix transcription factors
-
10.1007/s00239-009-9232-7
-
Y Wang K Chen Q Yao X Zheng Z Yang 2009 Phylogenetic analysis of zebrafish basic helix-loop-helix transcription factors J Mol Evol 6 629 640 10.1007/s00239-009-9232-7
-
(2009)
J Mol Evol
, vol.6
, pp. 629-640
-
-
Wang, Y.1
Chen, K.2
Yao, Q.3
Zheng, X.4
Yang, Z.5
-
24
-
-
77950376512
-
The genome of a songbird
-
20360741 10.1038/nature08819 1:CAS:528:DC%2BC3cXktVyhu7c%3D
-
WC Warren DF Clayton H Ellegren AP Arnold LW Hillier A Künstner S Searle S White AJ Vilella S Fairley A Heger L Kong CP Ponting ED Jarvis CV Mello P Minx P Lovell TA Velho M Ferris CN Balakrishnan S Sinha C Blatti SE London Y Li YC Lin J George J Sweedler B Southey P Gunaratne M Watson K Nam N Backström L Smeds B Nabholz Y Itoh O Whitney AR Pfenning J Howard M Völker BM Skinner DK Griffin L Ye WM McLaren P Flicek V Quesada G Velasco C Lopez-Otin XS Puente T Olender D Lancet AF Smit R Hubley MK Konkel JA Walker MA Batzer W Gu DD Pollock L Chen Z Cheng EE Eichler J Stapley J Slate R Ekblom T Birkhead T Burke D Burt C Scharff I Adam H Richard M Sultan A Soldatov H Lehrach SV Edwards SP Yang X Li T Graves L Fulton J Nelson A Chinwalla S Hou ER Mardis RK Wilson 2010 The genome of a songbird Nature 464 7289 757 762 20360741 10.1038/nature08819 1:CAS:528:DC%2BC3cXktVyhu7c%3D
-
(2010)
Nature
, vol.464
, Issue.7289
, pp. 757-762
-
-
Warren, W.C.1
Clayton, D.F.2
Ellegren, H.3
Arnold, A.P.4
Hillier, L.W.5
Künstner, A.6
Searle, S.7
White, S.8
Vilella, A.J.9
Fairley, S.10
Heger, A.11
Kong, L.12
Ponting, C.P.13
Jarvis, E.D.14
Mello, C.V.15
Minx, P.16
Lovell, P.17
Velho, T.A.18
Ferris, M.19
Balakrishnan, C.N.20
Sinha, S.21
Blatti, C.22
London, S.E.23
Li, Y.24
Lin, Y.C.25
George, J.26
Sweedler, J.27
Southey, B.28
Gunaratne, P.29
Watson, M.30
Nam, K.31
Backström, N.32
Smeds, L.33
Nabholz, B.34
Itoh, Y.35
Whitney, O.36
Pfenning, A.R.37
Howard, J.38
Völker, M.39
Skinner, B.M.40
Griffin, D.K.41
Ye, L.42
McLaren, W.M.43
Flicek, P.44
Quesada, V.45
Velasco, G.46
Lopez-Otin, C.47
Puente, X.S.48
Olender, T.49
Lancet, D.50
Smit, A.F.51
Hubley, R.52
Konkel, M.K.53
Walker, J.A.54
Batzer, M.A.55
Gu, W.56
Pollock, D.D.57
Chen, L.58
Cheng, Z.59
Eichler, E.E.60
Stapley, J.61
Slate, J.62
Ekblom, R.63
Birkhead, T.64
Burke, T.65
Burt, D.66
Scharff, C.67
Adam, I.68
Richard, H.69
Sultan, M.70
Soldatov, A.71
Lehrach, H.72
Edwards, S.V.73
Yang, S.P.74
Li, X.75
Graves, T.76
Fulton, L.77
Nelson, J.78
Chinwalla, A.79
Hou, S.80
Mardis, E.R.81
Wilson, R.K.82
more..
-
25
-
-
67651154108
-
A genomewide survey on basic helix-loop-helix transcription factors in rat and mouse
-
10.1007/s00335-009-9196-3
-
X Zheng Y Wang Q Yao Z Yang K Chen 2009 A genomewide survey on basic helix-loop-helix transcription factors in rat and mouse Mamm Genome 6 393 10.1007/s00335-009-9196-3
-
(2009)
Mamm Genome
, vol.6
, pp. 393
-
-
Zheng, X.1
Wang, Y.2
Yao, Q.3
Yang, Z.4
Chen, K.5
|