Ultraviolet resonance Raman study of side chain electrostatic control of poly-l-lysine conformation

Journal of Physical Chemistry B

Volumn 115, Issue 14, 2011, Pages 4251-4258

  Ma, Lu ^a   Ahmed, Zeeshan ^a   Asher, Sanford A ^a  

^a UNIVERSITY OF PITTSBURGH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; ELECTROSTATICS; IONIC STRENGTH; RESONANCE; SODIUM CHLORIDE;

CORRELATION ANALYSIS; CROSS PEAKS; ELECTROSTATIC CONTROL; ELECTROSTATIC INTERACTIONS; ELECTROSTATIC REPULSION; HELIX CONFORMATION; HIGH PH; IONIC STRENGTH DEPENDENCE; MULTIPLE COMPONENTS; NEW STRUCTURES; PEPTIDE BACKBONES; PH DEPENDENCE; POLY-L-LYSINE; RELATIVE FRACTION; SIDE CHAINS; TURN STRUCTURE; TWO-STATE MODEL; ULTRAVIOLET RESONANCE RAMAN; UV-RESONANCE RAMAN SPECTROSCOPY;

CONFORMATIONS;

EID: 79953797106     PISSN: 15206106     EISSN: 15205207     Source Type: Journal    
DOI: 10.1021/jp2005343     Document Type: Article

References (45)

1. Baldwin, R. L.; Rose, G. D. Trends Biochem. Sci. 1999, 24, 26
2. Creighton, T. E. Protein Structure, 2nd ed.; W.H. Freeman: New York, 1997.
3. Dill, K. A. Biochemistry 1985, 24, 1501
4. Dill, K. A. Protein Sci. 1999, 8, 1166
5. Dobson, C. M.; Sali, A.; Karplus, M. Angew. Chem., Int. Ed. 1998, 37, 868
6. Anfinsen, C. B. Science 1973, 181, 223
7. Anfinsen, C. B.; Scheraga, H. A. Adv. Protein Chem. 1975, 29, 205
8. Haber, E.; Anfinsen, C. B. J. Biol. Chem. 1962, 237, 1839
9. Dill, K. A.; Ozkan, S. B.; Shell, M. S.; Weikl, T. R. Annu. Rev. Biophys. 2008, 37, 289
10. Suarez, M.; Jaramillo, A. J. R. Soc. Interface 2009, 6, S477
11. Morra, G.; Meli, M.; Colombo, G. Curr. Protein Pept. Sci. 2008, 9, 181
12. Thirumalai, D.; Ob Brien, E. P.; Morrison, G.; Hyeon, C. Annu. Rev. Biophys. 2010, 39, 159
13. Mikhonin, A. V.; Myshakina, N. S.; Bykov, S. V.; Asher, S. A. J. Am. Chem. Soc. 2005, 127, 7712
14. Shi, Z.; Chen, K.; Liu, Z.; Kallenbach, N. R. Chem. Rev. 2006, 106, 1877
15. Krimm, S.; Mark, J. E. Proc. Nat. Acad. Sci. U. S. 1968, 60, 1122
16. Ma, L.; Ahmed, Z.; Mikhonin, A. V.; Asher, S. A. J. Phys. Chem. B 2007, 111, 7675
17. Davidson, B.; Fasman, G. D. Biochemistry 1967, 6, 1616
18. JiJi, R. D.; Balakrishnan, G.; Hu, Y.; Spiro, T. G. Biochemistry 2006, 45, 34
19. Bykov, S.; Lednev, I.; Ianoul, A.; Mikhonin, A.; Munro, C.; Asher, S. A. Appl. Spectrosc. 2005, 59, 1541
20. Lednev, I. K.; Karnoup, A. S.; Sparrow, M. C.; Asher, S. A. J. Am. Chem. Soc. 1999, 121, 8074
21. Chi, Z.; Chen, X. G.; Holtz, J. S. W.; Asher, S. A. Biochemistry 1998, 37, 2854
22. Noda, I. Appl. Spectrosc. 2000, 54, 994
23. Noda, I.; Ozaki, Y. Two dimensional correlation spectroscopy-applications in vibrational and optical spectroscopy; John Wiley & Sons Ltd: Chichester, UK, 2004.
24. Imahori, K.; Tanaka, J. J. Mol. Biol. 1959, 1, 359
25. Tinoco, I. J.; Halpern, A.; Simpson, W. T. Polyamino Acids, Polypeptides, and Proteins; University of Wisconsin Press: Madison, 1962.
26. Jordan, T.; Spiro, T. G. J. Raman Spectrosc. 1995, 26, 867
27. Mikhonin, A. V.; Ahmed, Z.; Ianoul, A.; Asher, S. A. J. Phys. Chem. B 2004, 108, 19020
28. Myshakina, N. S.; Ahmed, Z.; Asher, S. A. J. Phys. Chem. B 2008, 112, 11873
29. Triggs, N. E.; Valentini, J. J. J. Phys. Chem. 1992, 96, 6922
30. Mikhonin, A. V.; Bykov, S. V.; Myshakina, N. S.; Asher, S. A. J. Phys. Chem. B 2006, 110, 1928
31. Myer, Y. P. Macromolecules 1969, 2, 624
32. Chi, Z.; Chen, X. G.; Holtz, J. S. W.; Asher, S. A. Biochemistry 1998, 37, 2854
33. Noda, I. J. Am. Chem. Soc. 1989, 111, 8116
34. Noda, I. Appl. Spectrosc. 1993, 47, 1329
35. Huang, H. Anal. Chem. 2007, 79, 8281
36. Jia, Q.; Wang, N.-N.; Yu, Z.-W. Appl. Spectrosc. 2009, 63, 344
37. Goto, Y.; Takahashi, N.; Fink, A. L. Biochemistry 1990, 29, 3480
38. Lund, M.; Vacha, R.; Jungwirth, P. Langmuir 2008, 24, 3387
39. Xiong, K.; Asher, S. A. J. Phys. Chem. A 2010, in press.
40. Xiong, K.; Ma, L.; Asher, S. A. in preparation.
41. Lifson, S.; Roig, A. J. Chem. Phys. 1961, 34, 1963
42. Zimm, B. H.; Bragg, J. K. J. Chem. Phys. 1959, 31, 526
43. Dos, A.; Schimming, V.; Tosoni, S.; Limbach, H.-H. J. Phys. Chem. B 2008, 112, 15604
44. Asciutto, E. K.; General, I. J.; Xiong, K.; Asher, S. A.; Madura, J. D. Biophys. J. 2010, 98, 186
45. Shanmugam, G.; Polavarapu, P. L. J. Mol. Struct. 2008, 890, 144