메뉴 건너뛰기




Volumn 85, Issue 2, 2011, Pages 83-91

The use of nucleic acid based stable isotope probing to identify the microorganisms responsible for anaerobic benzene and toluene biodegradation

Author keywords

Anaerobic biodegradation; Benzene; SIP; Stable isotope probing; Toluene

Indexed keywords

BACTERIAL DNA; BACTERIAL RNA; BENZENE; CARBON 13; GASOLINE; TOLUENE;

EID: 79953221765     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2011.02.011     Document Type: Review
Times cited : (38)

References (84)
  • 3
    • 0028964829 scopus 로고
    • Taxonomic position of aromatic-degrading denitrifying pseudomonad strains K-172 and Kb-740 and their description as new members of the genera Thauera, as Thauera aromatica sp. nov. and Azoarcus, as Azoarcus evansii sp. nov., respectively, members of the beta-subclass of the proteobacteria
    • Anders H.J., Kaetzke A., Kampfer P., Ludwig W., Fuchs G. Taxonomic position of aromatic-degrading denitrifying pseudomonad strains K-172 and Kb-740 and their description as new members of the genera Thauera, as Thauera aromatica sp. nov. and Azoarcus, as Azoarcus evansii sp. nov., respectively, members of the beta-subclass of the proteobacteria. International Journal of Systematic Bacteriology 1995, 327-333.
    • (1995) International Journal of Systematic Bacteriology , pp. 327-333
    • Anders, H.J.1    Kaetzke, A.2    Kampfer, P.3    Ludwig, W.4    Fuchs, G.5
  • 4
    • 0033302932 scopus 로고    scopus 로고
    • Naphthalene and benzene degradation under Fe (III) reducing conditions in petroleum contaminated aquifers
    • Anderson R.T., Lovley D.R. Naphthalene and benzene degradation under Fe (III) reducing conditions in petroleum contaminated aquifers. Bioremediation Journal 1999, 3:121-135.
    • (1999) Bioremediation Journal , vol.3 , pp. 121-135
    • Anderson, R.T.1    Lovley, D.R.2
  • 7
    • 0030036363 scopus 로고    scopus 로고
    • Evidence that anaerobic oxidation of toluene in the denitrifying bacterium Thauera aromatica is initiated by formation of benzylsuccinate from toluene and fumarate
    • Biegert T., Fuchs G., Heider F. Evidence that anaerobic oxidation of toluene in the denitrifying bacterium Thauera aromatica is initiated by formation of benzylsuccinate from toluene and fumarate. European Journal of Biochemistry 1996, 238:661-668.
    • (1996) European Journal of Biochemistry , vol.238 , pp. 661-668
    • Biegert, T.1    Fuchs, G.2    Heider, F.3
  • 8
    • 72949090817 scopus 로고    scopus 로고
    • Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques
    • Bombach P., Chatzinotas A., Neu T.R., Kastner M., Lueders T., Vogt C. Enrichment and characterization of a sulfate-reducing toluene-degrading microbial consortium by combining in situ microcosms and stable isotope probing techniques. FEMS Microbiology Ecology 2010, 71:237-246.
    • (2010) FEMS Microbiology Ecology , vol.71 , pp. 237-246
    • Bombach, P.1    Chatzinotas, A.2    Neu, T.R.3    Kastner, M.4    Lueders, T.5    Vogt, C.6
  • 10
    • 0034176389 scopus 로고    scopus 로고
    • Detection of phenol and benzoate as intermediates of anaerobic benzene biodegradation under different terminal electron-accepting conditions
    • Caldwell M.E., Suflita J.M. Detection of phenol and benzoate as intermediates of anaerobic benzene biodegradation under different terminal electron-accepting conditions. Environmental Science & Technology 2000, 34:1216-1220.
    • (2000) Environmental Science & Technology , vol.34 , pp. 1216-1220
    • Caldwell, M.E.1    Suflita, J.M.2
  • 11
    • 25144513624 scopus 로고    scopus 로고
    • Hydroxylation and carboxylation-two crucial steps of anaerobic benzene degradation by Dechloromonas strain RCB
    • Chakraborty R., Coates J.D. Hydroxylation and carboxylation-two crucial steps of anaerobic benzene degradation by Dechloromonas strain RCB. Applied and Environmental Microbiology 2005, 71:5427-5432.
    • (2005) Applied and Environmental Microbiology , vol.71 , pp. 5427-5432
    • Chakraborty, R.1    Coates, J.D.2
  • 12
    • 29144533404 scopus 로고    scopus 로고
    • Anaerobic degradation of benzene, toluene, ethylbenzene, and xylene compounds by Dechloromonas strain RCB
    • Chakraborty R., O'Connor S.M., Chan E., Coates J.D. Anaerobic degradation of benzene, toluene, ethylbenzene, and xylene compounds by Dechloromonas strain RCB. Applied and Environmental Microbiology 2005, 71:8649-8655.
    • (2005) Applied and Environmental Microbiology , vol.71 , pp. 8649-8655
    • Chakraborty, R.1    O'Connor, S.M.2    Chan, E.3    Coates, J.D.4
  • 13
    • 28844446178 scopus 로고    scopus 로고
    • Molecular characterization of anaerobic microbial communities from benzene-degrading sediments under methanogenic conditions
    • Chang W., Um Y., Holoman T.R.P. Molecular characterization of anaerobic microbial communities from benzene-degrading sediments under methanogenic conditions. Biotechnology Progress 2005, 21:1789-1794.
    • (2005) Biotechnology Progress , vol.21 , pp. 1789-1794
    • Chang, W.1    Um, Y.2    Holoman, T.R.P.3
  • 14
    • 0035963322 scopus 로고    scopus 로고
    • Anaerobic benzene oxidation coupled to nitrate reduction in pure culture by two strains of Dechloromonas
    • Coates J.D., Chakraborty R., Lack J.G., O'Connor S.M., Cole K.A., Bender K.S., et al. Anaerobic benzene oxidation coupled to nitrate reduction in pure culture by two strains of Dechloromonas. Nature 2001, 411:1039-1043.
    • (2001) Nature , vol.411 , pp. 1039-1043
    • Coates, J.D.1    Chakraborty, R.2    Lack, J.G.3    O'Connor, S.M.4    Cole, K.A.5    Bender, K.S.6
  • 15
    • 33750941443 scopus 로고    scopus 로고
    • Identification of in situ 2,4-dichlorophenoxyacetic acid-degrading soil microorganisms using DNA-stable isotope probing
    • Cupples A.M., Sims G.K. Identification of in situ 2,4-dichlorophenoxyacetic acid-degrading soil microorganisms using DNA-stable isotope probing. Soil Biology & Biochemistry 2007, 39:232-238.
    • (2007) Soil Biology & Biochemistry , vol.39 , pp. 232-238
    • Cupples, A.M.1    Sims, G.K.2
  • 17
    • 33846096841 scopus 로고    scopus 로고
    • Assessment of anaerobic benzene degradation potential using 16S rRNA gene-targeted real-time PCR
    • Da Silva M.L.B., Alvarez P.J.J. Assessment of anaerobic benzene degradation potential using 16S rRNA gene-targeted real-time PCR. Environmental Microbiology 2007, 9:72-80.
    • (2007) Environmental Microbiology , vol.9 , pp. 72-80
    • Da Silva, M.L.B.1    Alvarez, P.J.J.2
  • 18
    • 29144520930 scopus 로고    scopus 로고
    • Use of field-based stable isotope probing to identify adapted populations and track carbon flow through a phenol-degrading soil microbial community
    • DeRito C.M., Pumphrey G.M., Madsen E.L. Use of field-based stable isotope probing to identify adapted populations and track carbon flow through a phenol-degrading soil microbial community. Appl Environ Microb 2005, 71:7858-7865.
    • (2005) Appl Environ Microb , vol.71 , pp. 7858-7865
    • DeRito, C.M.1    Pumphrey, G.M.2    Madsen, E.L.3
  • 19
    • 0032189023 scopus 로고    scopus 로고
    • Microbial diversity in a hydrocarbon- and chlorinated-solvent-contaminated aquifer undergoing intrinsic bioremediation
    • Dojka M.A., Hugenholtz P., Haack S.K., Pace N.R. Microbial diversity in a hydrocarbon- and chlorinated-solvent-contaminated aquifer undergoing intrinsic bioremediation. Applied and Environmental Microbiology 1998, 64:3869-3877.
    • (1998) Applied and Environmental Microbiology , vol.64 , pp. 3869-3877
    • Dojka, M.A.1    Hugenholtz, P.2    Haack, S.K.3    Pace, N.R.4
  • 20
    • 0025655580 scopus 로고
    • Isolation and characterization of a bacterium that mineralizes toluene in the absence of molecular oxygen
    • Dolfing J., Zeyer J., Bindereicher P., Schwarzenbach R.P. Isolation and characterization of a bacterium that mineralizes toluene in the absence of molecular oxygen. Archives of Microbiology 1990, 154:336-341.
    • (1990) Archives of Microbiology , vol.154 , pp. 336-341
    • Dolfing, J.1    Zeyer, J.2    Bindereicher, P.3    Schwarzenbach, R.P.4
  • 21
    • 0026750967 scopus 로고
    • Complete mineralization of benzene by aquifer microorganisms under strictly anaerobic conditions
    • Edwards E.A., Grbicgalic D. Complete mineralization of benzene by aquifer microorganisms under strictly anaerobic conditions. Applied and Environmental Microbiology 1992, 58:2663-2666.
    • (1992) Applied and Environmental Microbiology , vol.58 , pp. 2663-2666
    • Edwards, E.A.1    Grbicgalic, D.2
  • 23
    • 0028105839 scopus 로고
    • Isolation, characterization, and distribution of denitrifying toluene degraders from a variety of habitats
    • Fries M.R., Zhou J.H., Cheesanford J., Tiedje J.M. Isolation, characterization, and distribution of denitrifying toluene degraders from a variety of habitats. Applied and Environmental Microbiology 1994, 60:2802-2810.
    • (1994) Applied and Environmental Microbiology , vol.60 , pp. 2802-2810
    • Fries, M.R.1    Zhou, J.H.2    Cheesanford, J.3    Tiedje, J.M.4
  • 24
    • 25144508465 scopus 로고    scopus 로고
    • 13C-carrier DNA shortens the incubation time needed to detect benzoate-utilizing denitrifying bacteria by stable-isotope probing
    • Gallagher E., McGuinness L., Phelps C., Young L.Y., Kerkhof L.J. 13C-carrier DNA shortens the incubation time needed to detect benzoate-utilizing denitrifying bacteria by stable-isotope probing. Applied and Environmental Microbiology 2005, 71:5192-5196.
    • (2005) Applied and Environmental Microbiology , vol.71 , pp. 5192-5196
    • Gallagher, E.1    McGuinness, L.2    Phelps, C.3    Young, L.Y.4    Kerkhof, L.J.5
  • 26
    • 0023153032 scopus 로고
    • Transformation of toluene and benzene by mixed methanogenic cultures
    • Grbicgalic D., Vogel T.M. Transformation of toluene and benzene by mixed methanogenic cultures. Applied and Environmental Microbiology 1987, 53:254-260.
    • (1987) Applied and Environmental Microbiology , vol.53 , pp. 254-260
    • Grbicgalic, D.1    Vogel, T.M.2
  • 28
    • 58149354855 scopus 로고    scopus 로고
    • Resolving genetic functions within microbial populations: in situ analyses using rRNA and mRNA stable isotope probing coupled with single-cell Raman-fluorescence in situ hybridization
    • Huang W.E., Ferguson A., Singer A.C., Lawson K., Thompson I.P., Kalin R.M., et al. Resolving genetic functions within microbial populations: in situ analyses using rRNA and mRNA stable isotope probing coupled with single-cell Raman-fluorescence in situ hybridization. Applied and Environmental Microbiology 2009, 75:234-241.
    • (2009) Applied and Environmental Microbiology , vol.75 , pp. 234-241
    • Huang, W.E.1    Ferguson, A.2    Singer, A.C.3    Lawson, K.4    Thompson, I.P.5    Kalin, R.M.6
  • 29
    • 20444393042 scopus 로고    scopus 로고
    • Anaerobic degradation of benzene, toluene, ethylbenzene, and o-xylene in sediment-free iron-reducing enrichment cultures
    • Jahn M.K., Haderlein S.B., Meckenstock R.U. Anaerobic degradation of benzene, toluene, ethylbenzene, and o-xylene in sediment-free iron-reducing enrichment cultures. Applied and Environmental Microbiology 2005, 71:3355-3358.
    • (2005) Applied and Environmental Microbiology , vol.71 , pp. 3355-3358
    • Jahn, M.K.1    Haderlein, S.B.2    Meckenstock, R.U.3
  • 30
    • 0036032907 scopus 로고    scopus 로고
    • Biochemical and genetic evidence of benzylsuccinate synthase in toluene-degrading, ferric iron-reducing Geobacter metallireducens
    • Kane S.R., Beller H.R., Legler T.C., Anderson R.T. Biochemical and genetic evidence of benzylsuccinate synthase in toluene-degrading, ferric iron-reducing Geobacter metallireducens. Biodegradation 2002, 13:149-154.
    • (2002) Biodegradation , vol.13 , pp. 149-154
    • Kane, S.R.1    Beller, H.R.2    Legler, T.C.3    Anderson, R.T.4
  • 31
    • 33646584483 scopus 로고    scopus 로고
    • RNA-based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline-contaminated groundwater
    • Kasai Y., Takahata Y., Manefield M., Watanabe K. RNA-based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline-contaminated groundwater. Applied and Environmental Microbiology 2006, 72:3586-3592.
    • (2006) Applied and Environmental Microbiology , vol.72 , pp. 3586-3592
    • Kasai, Y.1    Takahata, Y.2    Manefield, M.3    Watanabe, K.4
  • 33
    • 31644442255 scopus 로고    scopus 로고
    • Phospholipid fatty acid - a bioindicator of environment monitoring and assessment in soil ecosystem
    • Kaur A., Chaudhary A., Kaur A., Choudhary R., Kaushik R. Phospholipid fatty acid - a bioindicator of environment monitoring and assessment in soil ecosystem. Current Science 2005, 89:1103-1112.
    • (2005) Current Science , vol.89 , pp. 1103-1112
    • Kaur, A.1    Chaudhary, A.2    Kaur, A.3    Choudhary, R.4    Kaushik, R.5
  • 35
    • 35948975729 scopus 로고    scopus 로고
    • The use of stable isotope probing to identify key iron-reducing microorganisms involved in anaerobic benzene degradation
    • Kunapuli U., Lueders T., Meckenstock R.U. The use of stable isotope probing to identify key iron-reducing microorganisms involved in anaerobic benzene degradation. ISME Journal 2007, 1:643-653.
    • (2007) ISME Journal , vol.1 , pp. 643-653
    • Kunapuli, U.1    Lueders, T.2    Meckenstock, R.U.3
  • 37
    • 58149226417 scopus 로고    scopus 로고
    • Field-based and laboratory stable isotope probing surveys of the identities of both aerobic and anaerobic benzene-metabolizing microorganisms in freshwater sediment
    • Liou J.S.C., DeRito C.M., Madsen E.L. Field-based and laboratory stable isotope probing surveys of the identities of both aerobic and anaerobic benzene-metabolizing microorganisms in freshwater sediment. Environmental Microbiology 2008, 10:1964-1977.
    • (2008) Environmental Microbiology , vol.10 , pp. 1964-1977
    • Liou, J.S.C.1    DeRito, C.M.2    Madsen, E.L.3
  • 39
    • 0028469073 scopus 로고
    • Stimulated anoxic biodegradation of aromatic hydrocarbons using Fe(III) ligands
    • Lovley D.R., Woodward J.C., Chapelle F.H. Stimulated anoxic biodegradation of aromatic hydrocarbons using Fe(III) ligands. Nature 1994, 370:128-131.
    • (1994) Nature , vol.370 , pp. 128-131
    • Lovley, D.R.1    Woodward, J.C.2    Chapelle, F.H.3
  • 42
    • 8144231103 scopus 로고    scopus 로고
    • Stable-isotope probing of microorganisms thriving at thermodynamic limits: syntrophic propionate oxidation in flooded soil
    • Lueders T., Pommerenke B., Friedrich M.W. Stable-isotope probing of microorganisms thriving at thermodynamic limits: syntrophic propionate oxidation in flooded soil. Appl Environ Microbiol 2004, 70:5778-5786.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 5778-5786
    • Lueders, T.1    Pommerenke, B.2    Friedrich, M.W.3
  • 43
    • 0842266321 scopus 로고    scopus 로고
    • Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic interactions with fungi and protozoa in oxic rice field soil
    • Lueders T., Wagner B., Claus P., Friedrich M.W. Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic interactions with fungi and protozoa in oxic rice field soil. Environ Microbiol 2004, 6:60-72.
    • (2004) Environ Microbiol , vol.6 , pp. 60-72
    • Lueders, T.1    Wagner, B.2    Claus, P.3    Friedrich, M.W.4
  • 44
    • 67649603157 scopus 로고    scopus 로고
    • Identification of a novel toluene-degrading bacterium from the candidate phylum TM7, as determined by DNA stable isotope probing
    • Luo C.L., Xie S.G., Sun W.M., Li X.D., Cupples A.M. Identification of a novel toluene-degrading bacterium from the candidate phylum TM7, as determined by DNA stable isotope probing. Applied and Environmental Microbiology 2009, 75:4644-4647.
    • (2009) Applied and Environmental Microbiology , vol.75 , pp. 4644-4647
    • Luo, C.L.1    Xie, S.G.2    Sun, W.M.3    Li, X.D.4    Cupples, A.M.5
  • 45
    • 23944499102 scopus 로고    scopus 로고
    • Cultivation-independent in situ molecular analysis of bacteria involved in degradation of pentachlorophenol in soil
    • Mahmood S., Paton G.I., Prosser J.I. Cultivation-independent in situ molecular analysis of bacteria involved in degradation of pentachlorophenol in soil. Environ Microbiol 2005, 7:1349-1360.
    • (2005) Environ Microbiol , vol.7 , pp. 1349-1360
    • Mahmood, S.1    Paton, G.I.2    Prosser, J.I.3
  • 47
    • 0036840287 scopus 로고    scopus 로고
    • RNA stable isotope probing, a novel means of linking microbial community function to phylogeny
    • Manefield M., Whiteley A.S., Griffiths R.I., Bailey M.J. RNA stable isotope probing, a novel means of linking microbial community function to phylogeny. Appl Environ Microbiol 2002, 68:5367-5373.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 5367-5373
    • Manefield, M.1    Whiteley, A.S.2    Griffiths, R.I.3    Bailey, M.J.4
  • 48
    • 0032797412 scopus 로고    scopus 로고
    • Fermentative toluene degradation in anaerobic defined syntrophic cocultures
    • Meckenstock R.U. Fermentative toluene degradation in anaerobic defined syntrophic cocultures. FEMS Microbiology Letters 1999, 177:67-73.
    • (1999) FEMS Microbiology Letters , vol.177 , pp. 67-73
    • Meckenstock, R.U.1
  • 49
    • 17544368805 scopus 로고    scopus 로고
    • Degradation of methyl bromide and methyl chloride in soil microcosms: use of stable C isotope fractionation and stable isotope probing to identify reactions and the responsible microorganisms
    • Miller L.G., Warner K.L., Baesman S.M., Oremland R.S., McDonald I.R., Radajewski S., et al. Degradation of methyl bromide and methyl chloride in soil microcosms: use of stable C isotope fractionation and stable isotope probing to identify reactions and the responsible microorganisms. Geochim Cosmochim Ac 2004, 68:3271-3283.
    • (2004) Geochim Cosmochim Ac , vol.68 , pp. 3271-3283
    • Miller, L.G.1    Warner, K.L.2    Baesman, S.M.3    Oremland, R.S.4    McDonald, I.R.5    Radajewski, S.6
  • 50
    • 3142628113 scopus 로고    scopus 로고
    • Degradation of o-xylene and m-xylene by a novel sulfate-reducer belonging to the genus Desulfotomaculum
    • Morasch B., Schink B., Tebbe C.C., Meckenstock R.U. Degradation of o-xylene and m-xylene by a novel sulfate-reducer belonging to the genus Desulfotomaculum. Archives of Microbiology 2004, 181:407-417.
    • (2004) Archives of Microbiology , vol.181 , pp. 407-417
    • Morasch, B.1    Schink, B.2    Tebbe, C.C.3    Meckenstock, R.U.4
  • 51
    • 0036200066 scopus 로고    scopus 로고
    • Identification of the functionally active methanotroph population in a peat soil microcosm by stable-isotope probing
    • Morris S.A., Radajewski S., Willison T.W., Murrell J.C. Identification of the functionally active methanotroph population in a peat soil microcosm by stable-isotope probing. Appl Environ Microbiol 2002, 68:1446-1453.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 1446-1453
    • Morris, S.A.1    Radajewski, S.2    Willison, T.W.3    Murrell, J.C.4
  • 52
    • 38149026187 scopus 로고    scopus 로고
    • Anaerobic degradation of benzene by a marine sulfate-reducing enrichment culture, and cell hybridization of the dominant phylotype
    • Musat F., Widdel F. Anaerobic degradation of benzene by a marine sulfate-reducing enrichment culture, and cell hybridization of the dominant phylotype. Environmental Microbiology 2008, 10:10-19.
    • (2008) Environmental Microbiology , vol.10 , pp. 10-19
    • Musat, F.1    Widdel, F.2
  • 54
    • 0037337335 scopus 로고    scopus 로고
    • Respiration of 13C-labeled substrates added to soil in the field and subsequent 16S rRNA gene analysis of 13C-labeled soil DNA
    • Padmanabhan P., Padmanabhan S., DeRito C., Gray A., Gannon D., Snape J.R., et al. Respiration of 13C-labeled substrates added to soil in the field and subsequent 16S rRNA gene analysis of 13C-labeled soil DNA. Appl Environ Microbiol 2003, 69:1614-1622.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 1614-1622
    • Padmanabhan, P.1    Padmanabhan, S.2    DeRito, C.3    Gray, A.4    Gannon, D.5    Snape, J.R.6
  • 55
    • 0033082550 scopus 로고    scopus 로고
    • Anaerobic biodegradation of BTEX and gasoline in various aquatic sediments
    • Phelps C.D., Young L.Y. Anaerobic biodegradation of BTEX and gasoline in various aquatic sediments. Biodegradation 1999, 10:15-25.
    • (1999) Biodegradation , vol.10 , pp. 15-25
    • Phelps, C.D.1    Young, L.Y.2
  • 56
    • 0030589673 scopus 로고    scopus 로고
    • Anaerobic degradation of benzene in BTX mixtures dependent on sulfate reduction
    • Phelps C.D., Kazumi J., Young L.Y. Anaerobic degradation of benzene in BTX mixtures dependent on sulfate reduction. Fems Microbiology Letters 1996, 145:433-437.
    • (1996) Fems Microbiology Letters , vol.145 , pp. 433-437
    • Phelps, C.D.1    Kazumi, J.2    Young, L.Y.3
  • 57
    • 0031732243 scopus 로고    scopus 로고
    • Molecular characterization of a sulfate-reducing consortium which mineralizes benzene
    • Phelps C.D., Kerkhof L.J., Young L.Y. Molecular characterization of a sulfate-reducing consortium which mineralizes benzene. FEMS Microbiology Ecology 1998, 27:269-279.
    • (1998) FEMS Microbiology Ecology , vol.27 , pp. 269-279
    • Phelps, C.D.1    Kerkhof, L.J.2    Young, L.Y.3
  • 58
    • 0028920232 scopus 로고
    • Anaerobic degradation of ethylbenzene and other aromatic hydrocarbons by new denitrifying bacteria
    • Rabus R., Widdel F. Anaerobic degradation of ethylbenzene and other aromatic hydrocarbons by new denitrifying bacteria. Archives of Microbiology 1995, 163:96-103.
    • (1995) Archives of Microbiology , vol.163 , pp. 96-103
    • Rabus, R.1    Widdel, F.2
  • 59
    • 0034628432 scopus 로고    scopus 로고
    • Stable-isotope probing as a tool in microbial ecology
    • Radajewski S., Ineson P., Parekh N.R., Murrell J.C. Stable-isotope probing as a tool in microbial ecology. Nature 2000, 403:646-649.
    • (2000) Nature , vol.403 , pp. 646-649
    • Radajewski, S.1    Ineson, P.2    Parekh, N.R.3    Murrell, J.C.4
  • 64
    • 15444374754 scopus 로고    scopus 로고
    • Stable-isotope probing of bacteria capable of degrading salicylate, naphthalene, or phenanthrene in a bioreactor treating contaminated soil
    • Singleton D.R., Powell S.N., Sangaiah R., Gold A., Ball L.M., Aitken M.D. Stable-isotope probing of bacteria capable of degrading salicylate, naphthalene, or phenanthrene in a bioreactor treating contaminated soil. Applied and Environmental Microbiology 2005, 71:1202-1209.
    • (2005) Applied and Environmental Microbiology , vol.71 , pp. 1202-1209
    • Singleton, D.R.1    Powell, S.N.2    Sangaiah, R.3    Gold, A.4    Ball, L.M.5    Aitken, M.D.6
  • 67
    • 75749123080 scopus 로고    scopus 로고
    • Direct link between toluene degradation in contaminated-site microcosms and a Polaromonas strain
    • Sun W.M., Xie S.G., Luo C.L., Cupples A.M. Direct link between toluene degradation in contaminated-site microcosms and a Polaromonas strain. Applied and Environmental Microbiology 2010, 76:956-959.
    • (2010) Applied and Environmental Microbiology , vol.76 , pp. 956-959
    • Sun, W.M.1    Xie, S.G.2    Luo, C.L.3    Cupples, A.M.4
  • 68
    • 33646597546 scopus 로고    scopus 로고
    • Assessment of chemical and microbiological signatures during natural attenuation of gasoline-contaminated groundwater
    • A. A. Balkema Publishers, London, England
    • Takahata Y., Kasai Y., Watanabe K. Assessment of chemical and microbiological signatures during natural attenuation of gasoline-contaminated groundwater. Proceedings of the European Symposium on Environmental Biotechnology 2004, 827-831. A. A. Balkema Publishers, London, England.
    • (2004) Proceedings of the European Symposium on Environmental Biotechnology , pp. 827-831
    • Takahata, Y.1    Kasai, Y.2    Watanabe, K.3
  • 69
    • 33750983332 scopus 로고    scopus 로고
    • Rapid intrinsic biodegradation of benzene, toluene, and xylenes at the boundary of a gasoline-contaminated plume under natural attenuation
    • Takahata Y., Kasai Y., Hoaki T., Watanabe K. Rapid intrinsic biodegradation of benzene, toluene, and xylenes at the boundary of a gasoline-contaminated plume under natural attenuation. Applied Microbiology and Biotechnology 2006, 73:713-722.
    • (2006) Applied Microbiology and Biotechnology , vol.73 , pp. 713-722
    • Takahata, Y.1    Kasai, Y.2    Hoaki, T.3    Watanabe, K.4
  • 72
    • 0037297033 scopus 로고    scopus 로고
    • Physiological and molecular characterization of anaerobic benzene-degrading mixed cultures
    • Ulrich A.C., Edwards E.A. Physiological and molecular characterization of anaerobic benzene-degrading mixed cultures. Environmental Microbiology 2003, 5:92-102.
    • (2003) Environmental Microbiology , vol.5 , pp. 92-102
    • Ulrich, A.C.1    Edwards, E.A.2
  • 73
    • 24644489076 scopus 로고    scopus 로고
    • Metabolites detected during biodegradation of 13C6-benzene in nitrate-reducing and methanogenic enrichment cultures
    • Ulrich A.C., Beller H.R., Edwards E.A. Metabolites detected during biodegradation of 13C6-benzene in nitrate-reducing and methanogenic enrichment cultures. Environmental Science & Technology 2005, 39:6681-6691.
    • (2005) Environmental Science & Technology , vol.39 , pp. 6681-6691
    • Ulrich, A.C.1    Beller, H.R.2    Edwards, E.A.3
  • 74
    • 34249809594 scopus 로고    scopus 로고
    • Benzene oxidation under sulfate-reducing conditions in columns simulating in situ conditions
    • Vogt C., Godeke S., Treutler H.C., Weiss H., Schirmer M., Richnow H.H. Benzene oxidation under sulfate-reducing conditions in columns simulating in situ conditions. Biodegradation 2007, 18:625-636.
    • (2007) Biodegradation , vol.18 , pp. 625-636
    • Vogt, C.1    Godeke, S.2    Treutler, H.C.3    Weiss, H.4    Schirmer, M.5    Richnow, H.H.6
  • 76
    • 70449105231 scopus 로고    scopus 로고
    • A strictly anaerobic betaproteobacterium Georgfuchsia toluolica gen. nov., sp nov degrades aromatic compounds with Fe(III), Mn(IV) or nitrate as an electron acceptor
    • Weelink S.A.B., van Doesburg W., Saia F.T., Rijpstra W.I.C., Roling W.F.M., Smidt H., et al. A strictly anaerobic betaproteobacterium Georgfuchsia toluolica gen. nov., sp nov degrades aromatic compounds with Fe(III), Mn(IV) or nitrate as an electron acceptor. Fems Microbiology Ecology 2009, 70:575-585.
    • (2009) Fems Microbiology Ecology , vol.70 , pp. 575-585
    • Weelink, S.A.B.1    van Doesburg, W.2    Saia, F.T.3    Rijpstra, W.I.C.4    Roling, W.F.M.5    Smidt, H.6
  • 77
    • 0032078793 scopus 로고    scopus 로고
    • Rapid benzene degradation in methanogenic sediments from a petroleum-contaminated aquifer
    • Weiner J.M., Lovley D.R. Rapid benzene degradation in methanogenic sediments from a petroleum-contaminated aquifer. Applied and Environmental Microbiology 1998, 64:1937-1939.
    • (1998) Applied and Environmental Microbiology , vol.64 , pp. 1937-1939
    • Weiner, J.M.1    Lovley, D.R.2
  • 78
    • 33947128111 scopus 로고    scopus 로고
    • Detection of anaerobic toluene and hydrocarbon degraders in contaminated aquifers using benzylsuccinate synthase (bssA) genes as a functional marker
    • Winderl C., Schaefer S., Lueders T. Detection of anaerobic toluene and hydrocarbon degraders in contaminated aquifers using benzylsuccinate synthase (bssA) genes as a functional marker. Environmental Microbiology 2007, 9:1035-1046.
    • (2007) Environmental Microbiology , vol.9 , pp. 1035-1046
    • Winderl, C.1    Schaefer, S.2    Lueders, T.3
  • 79
    • 77957008912 scopus 로고    scopus 로고
    • DNA-SIP identifies sulfate-reducing Clostridia as important toluene degraders in tar-oil-contaminated aquifer sediment
    • Winderl C., Penning H., von Netzer F., Meckenstock R.U., Lueders T. DNA-SIP identifies sulfate-reducing Clostridia as important toluene degraders in tar-oil-contaminated aquifer sediment. Isme Journal 2010, 4:1314-1325.
    • (2010) Isme Journal , vol.4 , pp. 1314-1325
    • Winderl, C.1    Penning, H.2    von Netzer, F.3    Meckenstock, R.U.4    Lueders, T.5
  • 80
    • 77957606853 scopus 로고    scopus 로고
    • Stable isotope probing identifies novel m-xylene degraders in soil microcosms from contaminated and uncontaminated sites
    • Xie S.G., Sun W.M., Luo C.L., Cupples A.M. Stable isotope probing identifies novel m-xylene degraders in soil microcosms from contaminated and uncontaminated sites. Water Air and Soil Pollution 2010, 212:113-122.
    • (2010) Water Air and Soil Pollution , vol.212 , pp. 113-122
    • Xie, S.G.1    Sun, W.M.2    Luo, C.L.3    Cupples, A.M.4
  • 81
    • 78650524504 scopus 로고    scopus 로고
    • Novel aerobic benzene degrading microorganisms identified in three soils by stable isotope probing
    • Xie S., Sun W., Luo W., Cupples A.M. Novel aerobic benzene degrading microorganisms identified in three soils by stable isotope probing. Biodegradation 2011, 22:71-81.
    • (2011) Biodegradation , vol.22 , pp. 71-81
    • Xie, S.1    Sun, W.2    Luo, W.3    Cupples, A.M.4
  • 82
    • 29244477525 scopus 로고    scopus 로고
    • A quantitative assay for linking microbial community function and structure of a naphthalene-degrading microbial consortium
    • Yu C.P., Chu K.H. A quantitative assay for linking microbial community function and structure of a naphthalene-degrading microbial consortium. Environmental Science & Technology 2005, 39:9611-9619.
    • (2005) Environmental Science & Technology , vol.39 , pp. 9611-9619
    • Yu, C.P.1    Chu, K.H.2
  • 83
    • 33846158515 scopus 로고    scopus 로고
    • Thermincola ferriacetica sp nov., a new anaerobic, thermophilic, facultatively chemolithoautotrophic bacterium capable of dissimilatory Fe(III) reduction
    • Zavarzina D.G., Sokolova T.G., Tourova T.P., Chernyh N.A., Kostrikina N.A., Bonch-Osmolovskaya E.A. Thermincola ferriacetica sp nov., a new anaerobic, thermophilic, facultatively chemolithoautotrophic bacterium capable of dissimilatory Fe(III) reduction. Extremophiles 2007, 11:1-7.
    • (2007) Extremophiles , vol.11 , pp. 1-7
    • Zavarzina, D.G.1    Sokolova, T.G.2    Tourova, T.P.3    Chernyh, N.A.4    Kostrikina, N.A.5    Bonch-Osmolovskaya, E.A.6
  • 84
    • 0029031784 scopus 로고
    • Phylogenetic analyses of a new group of denitrifiers capable of anaerobic growth on toluene and description of Azoarcus tolulyticus sp. nov
    • Zhou J.Z., Fries M.R., Cheesanford J.C., Tiedje J.M. Phylogenetic analyses of a new group of denitrifiers capable of anaerobic growth on toluene and description of Azoarcus tolulyticus sp. nov. International Journal of Systematic Bacteriology 1995, 45:500-506.
    • (1995) International Journal of Systematic Bacteriology , vol.45 , pp. 500-506
    • Zhou, J.Z.1    Fries, M.R.2    Cheesanford, J.C.3    Tiedje, J.M.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.