-
2
-
-
0006304427
-
-
ATSDR Agency for Toxic Substances and Disease Registry, Atlanta, GA, USA: US Public Health Service, US Department of Health and Human Services
-
ATSDR (Agency for Toxic Substances and Disease Registry) (1996) Toxicological Profile for Creosote. Atlanta, GA, USA: US Public Health Service, US Department of Health and Human Services.
-
(1996)
Toxicological Profile for Creosote
-
-
-
3
-
-
0003815886
-
-
ATSDR Agency for Toxic Substances and Disease Registry, Atlanta, GA, USA: US Public Health Service, US Department of Health and Human Services
-
ATSDR (Agency for Toxic Substances and Disease Registry) (2005) Toxicological Profile for Benzene. (Draft for Public Comment). Atlanta, GA, USA: US Public Health Service, US Department of Health and Human Services.
-
(2005)
Toxicological Profile for Benzene. (Draft for Public Comment)
-
-
-
4
-
-
0036690823
-
Geochemical and physiological evidence for mixed aerobic and anaerobic field biodegradation of coal tar waste by subsurface microbial communities
-
Bakermans, C., Hohnstock-Ashe, A.M., Padmanabhan, S., Padmanabhan, P., and Madsen, E.L. (2002) Geochemical and physiological evidence for mixed aerobic and anaerobic field biodegradation of coal tar waste by subsurface microbial communities. Microb Ecol 44: 107-117.
-
(2002)
Microb Ecol
, vol.44
, pp. 107-117
-
-
Bakermans, C.1
Hohnstock-Ashe, A.M.2
Padmanabhan, S.3
Padmanabhan, P.4
Madsen, E.L.5
-
5
-
-
0017030513
-
New approach to the cultivation of methanogenic bacteria: 2- mercaptoethanesulfonic acid (HS-CoM)-dependent growth of Methanobacterium ruminantium in a pressurized atmosphere
-
Balch, W.E., and Wolfe, R.S. (1976) New approach to the cultivation of methanogenic bacteria: 2- mercaptoethanesulfonic acid (HS-CoM)-dependent growth of Methanobacterium ruminantium in a pressurized atmosphere. Appl Environ Microbiol 32: 781-791.
-
(1976)
Appl Environ Microbiol
, vol.32
, pp. 781-791
-
-
Balch, W.E.1
Wolfe, R.S.2
-
6
-
-
34249684326
-
Stable isotope probing achieved by disentangling the effects of genome G+C content and isotope enrichment on DNA density
-
Buckley, D.H., Huangyutitham, V., Hsu, S.-F., and Nelson, T.A. (2006) Stable isotope probing achieved by disentangling the effects of genome G+C content and isotope enrichment on DNA density. Appl Environ Microbiol 73: 3189-3295.
-
(2006)
Appl Environ Microbiol
, vol.73
, pp. 3189-3295
-
-
Buckley, D.H.1
Huangyutitham, V.2
Hsu, S.-F.3
Nelson, T.A.4
-
7
-
-
0033050590
-
Anaerobic benzene biodegradation linked to nitrate reduction
-
Burland, S.B., and Edwards, E.A. (1999) Anaerobic benzene biodegradation linked to nitrate reduction. Appl Environ Microbiol 65: 529-533.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 529-533
-
-
Burland, S.B.1
Edwards, E.A.2
-
8
-
-
33745767937
-
Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, USA
-
Cadillo-Quiroz, H., Brauer, S., Yashiro, E., Sun, C., Yavitt, J., and Zinder, S. (2006) Vertical profiles of methanogenesis and methanogens in two contrasting acidic peatlands in central New York State, USA. Environ Microbiol 8: 1428-1440.
-
(2006)
Environ Microbiol
, vol.8
, pp. 1428-1440
-
-
Cadillo-Quiroz, H.1
Brauer, S.2
Yashiro, E.3
Sun, C.4
Yavitt, J.5
Zinder, S.6
-
9
-
-
0034176389
-
Detection of phenol and benzoate as intermediates of anaerobic benzene bio- degradation under different terminal electron accepting conditions
-
Caldwell, M.E., and Suflita, J.M. (2000) Detection of phenol and benzoate as intermediates of anaerobic benzene bio- degradation under different terminal electron accepting conditions. Environ Sci Technol 34: 1216-1220.
-
(2000)
Environ Sci Technol
, vol.34
, pp. 1216-1220
-
-
Caldwell, M.E.1
Suflita, J.M.2
-
10
-
-
29144533404
-
Anaerobic degradation of benzene, toluene, ethyl- benzene, and xylene compounds by Dechloromonas strain RCB
-
Chakraborty, R., O'Connor, S.M., Chan, E., and Coates, J.D. (2005) Anaerobic degradation of benzene, toluene, ethyl- benzene, and xylene compounds by Dechloromonas strain RCB. Appl Environ Microbiol 71: 8649-8655.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 8649-8655
-
-
Chakraborty, R.1
O'Connor, S.M.2
Chan, E.3
Coates, J.D.4
-
11
-
-
0033975110
-
Degradation of n-hexadecane and its metabolites by Pseudomonas aeruginosa under microaerobic and anaerobic denitrifying conditions
-
Chayabutra, C., and Ju L.K. (2000) Degradation of n-hexadecane and its metabolites by Pseudomonas aeruginosa under microaerobic and anaerobic denitrifying conditions. Appl Environ Microbiol 66: 493-498.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 493-498
-
-
Chayabutra, C.1
Ju, L.K.2
-
12
-
-
0035963322
-
Anaerobic benzene oxidation coupled to nitrate reduction in pure culture by two strains of Dechloromonas
-
Coates, J.D., Chakraborty, R., Lack, J.G., O'Connor, S.M., Cole, K.A., Bender, K.S., and Achenbach, L.A. (2001) Anaerobic benzene oxidation coupled to nitrate reduction in pure culture by two strains of Dechloromonas. Nature 411: 1039-1043.
-
(2001)
Nature
, vol.411
, pp. 1039-1043
-
-
Coates, J.D.1
Chakraborty, R.2
Lack, J.G.3
O'Connor, S.M.4
Cole, K.A.5
Bender, K.S.6
Achenbach, L.A.7
-
13
-
-
0036899015
-
Anaerobic benzene biodegradation - a new era
-
Coates, J.D., Chakraborty, R., and Mclnerney, M.J. (2002) Anaerobic benzene biodegradation - a new era. Res Microbiol 153: 621-628.
-
(2002)
Res Microbiol
, vol.153
, pp. 621-628
-
-
Coates, J.D.1
Chakraborty, R.2
Mclnerney, M.J.3
-
14
-
-
0037251969
-
The Ribosomal Database Project (RDP-ll): Previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
-
Cole, J.R., Chai, B., Marsh, T.L., Farris, R.J., Wang, Q., Kulam, S.A., et al. (2003) The Ribosomal Database Project (RDP-ll): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucleic Acids Res 31: 442-443.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 442-443
-
-
Cole, J.R.1
Chai, B.2
Marsh, T.L.3
Farris, R.J.4
Wang, Q.5
Kulam, S.A.6
-
15
-
-
33846096841
-
Assessment of anaerobic benzene degradation potential using 16S rRNA gene-targeted real-time PCR
-
Da Silva, M.L.B., and Alvarez, P.J.J. (2007) Assessment of anaerobic benzene degradation potential using 16S rRNA gene-targeted real-time PCR. Environ Microbiol 9: 72-80.
-
(2007)
Environ Microbiol
, vol.9
, pp. 72-80
-
-
Da Silva, M.L.B.1
Alvarez, P.J.J.2
-
16
-
-
29144520930
-
Use of field-based stable isotope probing to identify adapted populations and track carbon flow through a phenol- degrading soil microbial community
-
DeRito, C.M., Pumphrey, G.M., and Madsen, E.L. (2005) Use of field-based stable isotope probing to identify adapted populations and track carbon flow through a phenol- degrading soil microbial community. Appl Environ Microbiol 71: 7858-7865.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 7858-7865
-
-
DeRito, C.M.1
Pumphrey, G.M.2
Madsen, E.L.3
-
17
-
-
19144372182
-
Stable isotope probing-linking microbial identity to function
-
Dumont, M.G., and Murrell, J.C. (2005) Stable isotope probing-linking microbial identity to function. Nat Rev Microbiol 3: 499-504.
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 499-504
-
-
Dumont, M.G.1
Murrell, J.C.2
-
19
-
-
0037224856
-
Degradation of polycyclic aromatic hydrocarbons at low temperature under aerobic and nitrate-reducing conditions in enrichment cultures from northern soils
-
Eriksson, M., and Sodersten, E., Yu, Z., Dalhammar, G., and Mohn, W.W. (2003) Degradation of polycyclic aromatic hydrocarbons at low temperature under aerobic and nitrate-reducing conditions in enrichment cultures from northern soils. Appl Environ Microbiol 69: 275-284.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 275-284
-
-
Eriksson, M.1
Sodersten, E.2
Yu, Z.3
Dalhammar, G.4
Mohn, W.W.5
-
20
-
-
22744433578
-
Effects of long-term benzene pollution on bacterial diversity and community structure in groundwater
-
Fahy, A., Lethbridge, G., Earle, R., Ball, A.S., Timmis, K.N., and McGenity, T.J. (2005) Effects of long-term benzene pollution on bacterial diversity and community structure in groundwater. Environ Microbiol 7: 1192-1199.
-
(2005)
Environ Microbiol
, vol.7
, pp. 1192-1199
-
-
Fahy, A.1
Lethbridge, G.2
Earle, R.3
Ball, A.S.4
Timmis, K.N.5
McGenity, T.J.6
-
21
-
-
33750090667
-
Heterogeneous aerobic benzene-degrading communities in oxygen-depleted groundwaters
-
Fahy, A., McGenity, T.J., Timmis, K.N., and Ball, A.S. (2006) Heterogeneous aerobic benzene-degrading communities in oxygen-depleted groundwaters. FEMS Microbiol Ecol 58: 260-270.
-
(2006)
FEMS Microbiol Ecol
, vol.58
, pp. 260-270
-
-
Fahy, A.1
McGenity, T.J.2
Timmis, K.N.3
Ball, A.S.4
-
22
-
-
0003833145
-
-
Washington, DC, USA: American Society for Microbiology
-
Galli, E., Silver, S., and Witholt, B. (1992) Pseudomonas: Molecular Biology and Biotechnology. Washington, DC, USA: American Society for Microbiology.
-
(1992)
Pseudomonas: Molecular Biology and Biotechnology
-
-
Galli, E.1
Silver, S.2
Witholt, B.3
-
24
-
-
0029147966
-
Natural selection of PAH-degrading bacterial guilds at coal-tar disposal sites
-
Ghiorse, W.C., Herrick, J.B., Sandoli, R.L., and Madsen, E.L. (1995) Natural selection of PAH-degrading bacterial guilds at coal-tar disposal sites. Environ Health Perspect 103: 107-111.
-
(1995)
Environ Health Perspect
, vol.103
, pp. 107-111
-
-
Ghiorse, W.C.1
Herrick, J.B.2
Sandoli, R.L.3
Madsen, E.L.4
-
25
-
-
0014314575
-
Oxidative degradation of aromatic hydrocarbons by microorganisms. I. Enzymatic formation of catechol from benzene
-
Gibson, D.T., Koch, J.R., and Kallio, R.E. (1968) Oxidative degradation of aromatic hydrocarbons by microorganisms. I. Enzymatic formation of catechol from benzene. Biochemistry 7: 2653-2658.
-
(1968)
Biochemistry
, vol.7
, pp. 2653-2658
-
-
Gibson, D.T.1
Koch, J.R.2
Kallio, R.E.3
-
26
-
-
0023153032
-
Transformation of toluene and benzene by mixed methanogenic cultures
-
Grbic-Galic, D., and Vogel, T.M. (1987) Transformation of toluene and benzene by mixed methanogenic cultures. Appl Environ Microbiol 53: 254-260.
-
(1987)
Appl Environ Microbiol
, vol.53
, pp. 254-260
-
-
Grbic-Galic, D.1
Vogel, T.M.2
-
27
-
-
0042052049
-
Diversity and correlation of specific aromatic hydrocarbon biodegradation capabilities
-
Gulensoy, N., and Alvarez, P.J.J. (1999) Diversity and correlation of specific aromatic hydrocarbon biodegradation capabilities. Biodegradation 10: 331-340
-
(1999)
Biodegradation
, vol.10
, pp. 331-340
-
-
Gulensoy, N.1
Alvarez, P.J.J.2
-
28
-
-
0029795374
-
The p-ketoadipate pathway and the biology of self-identity
-
Harwood, C.S., and Parales, R.E. (1996) The p-ketoadipate pathway and the biology of self-identity. Ann Rev Microbiol 50: 553-590.
-
(1996)
Ann Rev Microbiol
, vol.50
, pp. 553-590
-
-
Harwood, C.S.1
Parales, R.E.2
-
29
-
-
64849098664
-
-
Hoefs, J. (2004) Stable Isotope Geochemistry, 5th edn. New York, USA: Springer. Huber, T., Faulkner, G., and Hugenholtz, P. (2004) Bellero- phon; a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20: 2317-2319.
-
Hoefs, J. (2004) Stable Isotope Geochemistry, 5th edn. New York, USA: Springer. Huber, T., Faulkner, G., and Hugenholtz, P. (2004) Bellero- phon; a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20: 2317-2319.
-
-
-
-
30
-
-
0035487318
-
Counting the uncountable: Statistical approaches to estimating microbial diversity
-
Hughes, J.B., Hellmann, J.J., Ricketts, T.H., and Bohannan, B.J.M. (2001) Counting the uncountable: statistical approaches to estimating microbial diversity. Appl Environ Microbiol 67: 4399-4406.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 4399-4406
-
-
Hughes, J.B.1
Hellmann, J.J.2
Ricketts, T.H.3
Bohannan, B.J.M.4
-
31
-
-
64849099231
-
-
IARC (Interagency Research on Cancer) (2004) Overall Evaluations of Carcinogenicity to Humans: As Evaluated in IARC Monographs 1-82 (A Total of 900 Agents, Mixtures and Exposures). Lyon, France: International Agency for Research on Cancer. [WWW document, accessed 15 February 2005.] URL http://www-cie.iarc.fr/ monoeval/crthall.html
-
IARC (Interagency Research on Cancer) (2004) Overall Evaluations of Carcinogenicity to Humans: As Evaluated in IARC Monographs Volumes 1-82 (A Total of 900 Agents, Mixtures and Exposures). Lyon, France: International Agency for Research on Cancer. [WWW document, accessed 15 February 2005.] URL http://www-cie.iarc.fr/ monoeval/crthall.html
-
-
-
-
32
-
-
20444393042
-
Anaerobic degradation of benzene, toluene, ethylbenzene, and o-xylene in sediment-free iron-reducing enrichment cultures
-
Jahn, M.K., Haderlein, S.B., and Meckenstock, R.U. (2005) Anaerobic degradation of benzene, toluene, ethylbenzene, and o-xylene in sediment-free iron-reducing enrichment cultures. Appl Environ Microbiol 71: 3355-3358.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 3355-3358
-
-
Jahn, M.K.1
Haderlein, S.B.2
Meckenstock, R.U.3
-
33
-
-
0345686678
-
Discovery of a bacterium, with distinctive dioxygenase, that is responsible for in situ biodegradation in contaminated sediment
-
Jeon, C.O., Park, W., Padmanabhan, P., DeRito, C., Snape, J.R., and Madsen, E.L. (2003) Discovery of a bacterium, with distinctive dioxygenase, that is responsible for in situ biodegradation in contaminated sediment. Proc Natl Acad Sci USA 100: 13591-13596.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 13591-13596
-
-
Jeon, C.O.1
Park, W.2
Padmanabhan, P.3
DeRito, C.4
Snape, J.R.5
Madsen, E.L.6
-
34
-
-
33646584483
-
RNA-based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline- contaminated groundwater
-
Kasai, Y., Takahata, Y., Manefield, M., and Watanabe, K. (2006) RNA-based stable isotope probing and isolation of anaerobic benzene-degrading bacteria from gasoline- contaminated groundwater. Appl Environ Microbiol 72: 3586-3592.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 3586-3592
-
-
Kasai, Y.1
Takahata, Y.2
Manefield, M.3
Watanabe, K.4
-
35
-
-
33746133574
-
Assessment of microbial in situ activity in contaminated aquifers
-
Kastner, M., Fischer, A., Nijenhuis, I., Geyer, R., Stelzer, N., Bombach, P., et al. (2006) Assessment of microbial in situ activity in contaminated aquifers. Eng Life Sci 6: 234-251.
-
(2006)
Eng Life Sci
, vol.6
, pp. 234-251
-
-
Kastner, M.1
Fischer, A.2
Nijenhuis, I.3
Geyer, R.4
Stelzer, N.5
Bombach, P.6
-
36
-
-
0031052334
-
Anaerobic degradation of benzene in diverse anoxic environments
-
Kazumi, J., Caldwell, M.E., Suflita, J.M., Lovley, D.R., and Young, L.Y. (1997) Anaerobic degradation of benzene in diverse anoxic environments. Environ Sci Technol 31: 813-818.
-
(1997)
Environ Sci Technol
, vol.31
, pp. 813-818
-
-
Kazumi, J.1
Caldwell, M.E.2
Suflita, J.M.3
Lovley, D.R.4
Young, L.Y.5
-
37
-
-
35948975729
-
The use of stable isotope probing to identify key iron- reducing microorganisms involved in anaerobic benzene degradation
-
Kunapuli, U., Lueders, T., and Meckenstock, R. (2007) The use of stable isotope probing to identify key iron- reducing microorganisms involved in anaerobic benzene degradation. ISME J1 : 643-653.
-
(2007)
ISME J
, vol.1
, pp. 643-653
-
-
Kunapuli, U.1
Lueders, T.2
Meckenstock, R.3
-
38
-
-
34249939326
-
Biphenyl-utilizing bacteria and their functional genes in a pine root zone contaminated with polychlorinated biphenyls (PCBs)
-
Leigh, M.B., Pellizari, V.H., UhIAk, O., Sutka, R., Rodrigues, J., Ostrom, N.E., et al. (2007) Biphenyl-utilizing bacteria and their functional genes in a pine root zone contaminated with polychlorinated biphenyls (PCBs). ISME J1 : 134-148.
-
(2007)
ISME J
, vol.1
, pp. 134-148
-
-
Leigh, M.B.1
Pellizari, V.H.2
UhIAk, O.3
Sutka, R.4
Rodrigues, J.5
Ostrom, N.E.6
-
39
-
-
0028909388
-
Benzene oxidation coupled to sulfate reduction
-
Lovley, D.R., Coates, J.D., Woodward, J.C., and Phillips, E.J.P. (1995) Benzene oxidation coupled to sulfate reduction. Appl Environ Microbiol 61: 953-958.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 953-958
-
-
Lovley, D.R.1
Coates, J.D.2
Woodward, J.C.3
Phillips, E.J.P.4
-
40
-
-
0030022401
-
Rapid anaerobic benzene degradation with a variety of chelated Fe(III) forms
-
Lovley, D.R., Woodward, J.C., and Chapelle, F.H. (1996) Rapid anaerobic benzene degradation with a variety of chelated Fe(III) forms. Appl Environ Microbiol 62: 288-291.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 288-291
-
-
Lovley, D.R.1
Woodward, J.C.2
Chapelle, F.H.3
-
41
-
-
0842266321
-
Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic inter-actions with fungi and protozoa in oxic rice field soil
-
Lueders, T., Wagner, B., Claus, P., and Friedrich, M.W. (2004) Stable isotope probing of rRNA and DNA reveals a dynamic methylotroph community and trophic inter-actions with fungi and protozoa in oxic rice field soil. Environ Microbiol 6: 60.
-
(2004)
Environ Microbiol
, vol.6
, pp. 60
-
-
Lueders, T.1
Wagner, B.2
Claus, P.3
Friedrich, M.W.4
-
42
-
-
17844366280
-
Identifying microorganisms responsible for ecologically significant biogeochemical processes
-
Madsen, E.L. (2005) Identifying microorganisms responsible for ecologically significant biogeochemical processes. Nat Rev Microbiol 3: 439-446.
-
(2005)
Nat Rev Microbiol
, vol.3
, pp. 439-446
-
-
Madsen, E.L.1
-
43
-
-
31944439463
-
The use of stable isotope probing techniques in bioreactor and field studies on bioremediation
-
Madsen, E.L. (2006) The use of stable isotope probing techniques in bioreactor and field studies on bioremediation. Curr Opin Biotechnol 17: 92-97.
-
(2006)
Curr Opin Biotechnol
, vol.17
, pp. 92-97
-
-
Madsen, E.L.1
-
44
-
-
0025918927
-
In situ biodegradation: Microbiological patterns in a contaminated aquifer
-
Madsen, E.L., Sinclair, J.L., and Ghiorse, W.C. (1991) In situ biodegradation: microbiological patterns in a contaminated aquifer. Science 252: 830-833.
-
(1991)
Science
, vol.252
, pp. 830-833
-
-
Madsen, E.L.1
Sinclair, J.L.2
Ghiorse, W.C.3
-
45
-
-
0029852588
-
Oxygen limitations and aging as explanation for the persistence of naphthalene in coal-tar contaminated surface sediments
-
Madsen, E.L., Mann, C.L., and Bilotta, S. (1996) Oxygen limitations and aging as explanation for the persistence of naphthalene in coal-tar contaminated surface sediments. Environ Toxicol Chem 15: 1876-1882.
-
(1996)
Environ Toxicol Chem
, vol.15
, pp. 1876-1882
-
-
Madsen, E.L.1
Mann, C.L.2
Bilotta, S.3
-
46
-
-
33745514006
-
Effect of dissolved oxygen regime on growth dynamics of Pseudomonas spp. during benzene degradation
-
Mahendran, B., Choi, N.-C., Choi, J.-W., and Kim, D.-J. (2006) Effect of dissolved oxygen regime on growth dynamics of Pseudomonas spp. during benzene degradation. Appl Microbiol Biotechnol 71: 350-354.
-
(2006)
Appl Microbiol Biotechnol
, vol.71
, pp. 350-354
-
-
Mahendran, B.1
Choi, N.-C.2
Choi, J.-W.3
Kim, D.-J.4
-
47
-
-
0036452120
-
Technical considerations for RNA- based stable isotope probing: An approach to associating microbial diversity with microbial community function
-
Manefield, M., Whiteley, A.S., Ostle, N., Ineson, P., and Bailey, M.J. (2002a) Technical considerations for RNA- based stable isotope probing: an approach to associating microbial diversity with microbial community function. Rapid Commun Mass Spectrom 16: 2179-2183.
-
(2002)
Rapid Commun Mass Spectrom
, vol.16
, pp. 2179-2183
-
-
Manefield, M.1
Whiteley, A.S.2
Ostle, N.3
Ineson, P.4
Bailey, M.J.5
-
48
-
-
0036840287
-
RNA stable isotope probing, a novel means of linking microbial community function to phylogeny
-
Manefield, M., Whiteley, A.S., Griffiths, R.I., and Bailey, M.J. (2002b) RNA stable isotope probing, a novel means of linking microbial community function to phylogeny. Appl Environ Microbiol 68: 5367-5373.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 5367-5373
-
-
Manefield, M.1
Whiteley, A.S.2
Griffiths, R.I.3
Bailey, M.J.4
-
49
-
-
0002448761
-
Energetics and bacterial growth
-
Faust, S.D, and Hunter, J.V, eds, New York, USA: Marcel Dekker
-
McCarty, P.L. (1971) Energetics and bacterial growth. In Organic Compounds in Aquatic Environments. Faust, S.D., and Hunter, J.V. (eds). New York, USA: Marcel Dekker.
-
(1971)
Organic Compounds in Aquatic Environments
-
-
McCarty, P.L.1
-
50
-
-
0000959014
-
Anaerobic benzene Biodegradation: A microcosm survey
-
Nales, M., Butler, B.J., and Edwards, E.A. (1998) Anaerobic benzene Biodegradation: a microcosm survey. J Biore- mediation 2: 125-144.
-
(1998)
J Biore- mediation
, vol.2
, pp. 125-144
-
-
Nales, M.1
Butler, B.J.2
Edwards, E.A.3
-
51
-
-
34248137874
-
Methodological considerations for the use of stable isotope probing in microbial ecology
-
Neufeld, J.D., Dumont, M.G., Vohra, J., and Murrell, J.C. (2007a) Methodological considerations for the use of stable isotope probing in microbial ecology. Microb Ecol 53: 435-442.
-
(2007)
Microb Ecol
, vol.53
, pp. 435-442
-
-
Neufeld, J.D.1
Dumont, M.G.2
Vohra, J.3
Murrell, J.C.4
-
52
-
-
34248577608
-
DNA stable-isotope probing
-
Neufeld, J.D., Vohra, J., Dumont, M.G., Lueders, T., Man- efield, M., Friedrich, M.W., and Murrell, J.C. (2007b) DNA stable-isotope probing. Nature Protocols 2: 860-866.
-
(2007)
Nature Protocols
, vol.2
, pp. 860-866
-
-
Neufeld, J.D.1
Vohra, J.2
Dumont, M.G.3
Lueders, T.4
Man- efield, M.5
Friedrich, M.W.6
Murrell, J.C.7
-
53
-
-
17144388923
-
Aerobic biodeg- radation of benzene and toluene under hypersaline conditions at the Great Salt Plains, Oklahoma
-
Nicholson, C.A., and Fathepure, B.Z. (2005) Aerobic biodeg- radation of benzene and toluene under hypersaline conditions at the Great Salt Plains, Oklahoma. FEMS Microbiol Lett 245: 257-262.
-
(2005)
FEMS Microbiol Lett
, vol.245
, pp. 257-262
-
-
Nicholson, C.A.1
Fathepure, B.Z.2
-
54
-
-
0037337335
-
Respiration of 13C- labeled substrates added to soil in the field and subsequent 16S rRNA gene analysis of 13C-labeled soil DNA
-
Padmanabhan, P., Padmanabhan, S., DeRito, C., Gray, A., Gannon, D., Snape, J.R., et al. (2003) Respiration of 13C- labeled substrates added to soil in the field and subsequent 16S rRNA gene analysis of 13C-labeled soil DNA. Appl Environ Microbiol 69: 1614-1622.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 1614-1622
-
-
Padmanabhan, P.1
Padmanabhan, S.2
DeRito, C.3
Gray, A.4
Gannon, D.5
Snape, J.R.6
-
55
-
-
0027728946
-
Coal tar dissolution in water-miscible solvents: Experimental evaluation
-
Peters, C.A., and Luthy, R.W. (1993) Coal tar dissolution in water-miscible solvents: experimental evaluation. Environ Sci Technol 27: 2831-2843.
-
(1993)
Environ Sci Technol
, vol.27
, pp. 2831-2843
-
-
Peters, C.A.1
Luthy, R.W.2
-
56
-
-
0031732243
-
Molecular characterization of a sulfate-reducing consortium which mineralizes benzene
-
Phelps, C.D., Kerkhof, L.J., and Young, L.Y. (1998) Molecular characterization of a sulfate-reducing consortium which mineralizes benzene. FEMS Microbiol Ecol 27: 269-279.
-
(1998)
FEMS Microbiol Ecol
, vol.27
, pp. 269-279
-
-
Phelps, C.D.1
Kerkhof, L.J.2
Young, L.Y.3
-
57
-
-
0025197555
-
Identification and catabolic activity of well-derived gasoline-degrading bacteria and a contaminated aquifer
-
Ridgway, H.F., Safarik, J., Phipps, D., Carl, P., and Clark, D. (1990) Identification and catabolic activity of well-derived gasoline-degrading bacteria and a contaminated aquifer. Appl Environ Microbiol 56: 3565-3575.
-
(1990)
Appl Environ Microbiol
, vol.56
, pp. 3565-3575
-
-
Ridgway, H.F.1
Safarik, J.2
Phipps, D.3
Carl, P.4
Clark, D.5
-
58
-
-
0032976385
-
Microbial communities associated with anaerobic benzene degradation in a petroleum- contaminated aquifer
-
Rooney-Varga, J.N., Anderson, R.T., Fraga, J.L., Ringelberg, D., and Lovley, D.R. (1999) Microbial communities associated with anaerobic benzene degradation in a petroleum- contaminated aquifer. Appl Environ Microbiol 65: 356-3063.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 356-3063
-
-
Rooney-Varga, J.N.1
Anderson, R.T.2
Fraga, J.L.3
Ringelberg, D.4
Lovley, D.R.5
-
59
-
-
0027139553
-
The role of bioattenuation in the management of aromatic hydrocarbon plumes in aquifers
-
Salanitro, J.P. (1993) The role of bioattenuation in the management of aromatic hydrocarbon plumes in aquifers. Ground Water Monitoring and Remediation 13: 150-161.
-
(1993)
Ground Water Monitoring and Remediation
, vol.13
, pp. 150-161
-
-
Salanitro, J.P.1
-
60
-
-
0030871461
-
Energetics of syntrophc cooperation in methanogenic degradation
-
Schink, B. (1997) Energetics of syntrophc cooperation in methanogenic degradation. Microbiol Molec Biol Rev 61: 262-280.
-
(1997)
Microbiol Molec Biol Rev
, vol.61
, pp. 262-280
-
-
Schink, B.1
-
61
-
-
33750078701
-
Introducing SONS, a tool for operational taxonomic unit-based comparisons of microbial community memberships and structures
-
Schloss, P.D., and Handelsman, J. (2006) Introducing SONS, a tool for operational taxonomic unit-based comparisons of microbial community memberships and structures. Appl Environ Microbiol 72: 6773-6779.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 6773-6779
-
-
Schloss, P.D.1
Handelsman, J.2
-
62
-
-
4644275463
-
Integration of microbial ecology and statistics: A test to compare gene libraries
-
Schloss, P.D., Larget, B.R., and Handelsman, J. (2004) Integration of microbial ecology and statistics: a test to compare gene libraries. Appl Environ Microbiol 70: 5485-5492.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 5485-5492
-
-
Schloss, P.D.1
Larget, B.R.2
Handelsman, J.3
-
63
-
-
63349090831
-
The anaerobic way of life
-
3rd edn. Dworkin, M.W, Falkow, S, Rosenberg, E, Schleifer, K.-H, and Stackebrandt, E, eds, New York, USA: Springer Verlag, pp
-
Schmitz, R.A., Daniel, R., Deppenmeir, U., and Gottschalk, G. (2006) The anaerobic way of life. In The Prokaryotes, Vol. 2, 3rd edn. Dworkin, M.W., Falkow, S., Rosenberg, E., Schleifer, K.-H., and Stackebrandt, E. (eds). New York, USA: Springer Verlag, pp. 86-101.
-
(2006)
The Prokaryotes
, vol.2
, pp. 86-101
-
-
Schmitz, R.A.1
Daniel, R.2
Deppenmeir, U.3
Gottschalk, G.4
-
64
-
-
33746155887
-
In situ microcosms to evaluate natural attenuation potentials in contaminated aquifers
-
Stelzer, N., Buning, C., Pfeifer, F., Dohrmann, A.B., Tebbe, C.C., Nijenhuis, I., et al. (2006) In situ microcosms to evaluate natural attenuation potentials in contaminated aquifers. Org Geochem 37: 1394-1410.
-
(2006)
Org Geochem
, vol.37
, pp. 1394-1410
-
-
Stelzer, N.1
Buning, C.2
Pfeifer, F.3
Dohrmann, A.B.4
Tebbe, C.C.5
Nijenhuis, I.6
-
65
-
-
0030067991
-
Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
-
Suzuki, M.T., and Giovannoni, S.J. (1996) Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl Environ Microbiol 62: 625-630.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 625-630
-
-
Suzuki, M.T.1
Giovannoni, S.J.2
-
66
-
-
33750983332
-
Rapid intrinsic biodegradation of benzene, toluene, and xylenes at the boundary of a gasoline-contaminated plume under natural attenuation
-
Takahata, Y., Kasai, Y., Hoaki, T., and Watanabe, K. (2006) Rapid intrinsic biodegradation of benzene, toluene, and xylenes at the boundary of a gasoline-contaminated plume under natural attenuation. Appl Microbiol Biotechnol 73: 713-722.
-
(2006)
Appl Microbiol Biotechnol
, vol.73
, pp. 713-722
-
-
Takahata, Y.1
Kasai, Y.2
Hoaki, T.3
Watanabe, K.4
-
67
-
-
33645318142
-
Benzene degradation coupled with chlorate reduction in a soil column study
-
Tan, N.C.G., Doesburg, W., Langenhoff, A.A.M., and Stams, A.J.M. (2006) Benzene degradation coupled with chlorate reduction in a soil column study. Biodegradation 17: 113-119.
-
(2006)
Biodegradation
, vol.17
, pp. 113-119
-
-
Tan, N.C.G.1
Doesburg, W.2
Langenhoff, A.A.M.3
Stams, A.J.M.4
-
68
-
-
0002828747
-
Monitoring sulfate-reducing bacteria: Comparison of enumeration media
-
Tanner, R.S. (1989) Monitoring sulfate-reducing bacteria: comparison of enumeration media. J Microbiol Methods 10: 83-90.
-
(1989)
J Microbiol Methods
, vol.10
, pp. 83-90
-
-
Tanner, R.S.1
-
69
-
-
3042564411
-
Cultivation of bacteria and fungi
-
2nd edn. Hurst, C.J, Crawford, R.L, Knudsen, G.R, McInerney, M.J, and Stetzenbach, L.D, eds, Washington, DC, USA: American Society for Microbiology, pp
-
Tanner, R.S. (2002) Cultivation of bacteria and fungi. In Manual of Environmental Microbiology, 2nd edn. Hurst, C.J., Crawford, R.L., Knudsen, G.R., McInerney, M.J., and Stetzenbach, L.D. (eds). Washington, DC, USA: American Society for Microbiology, pp. 62-70.
-
(2002)
Manual of Environmental Microbiology
, pp. 62-70
-
-
Tanner, R.S.1
-
70
-
-
20244376755
-
Comparative metage- nomics of microbial communities
-
Tringe, S.G., von Mering, C., Kobayashi, A., Salamov, A.A., Chen, K., Chang, H.W., et al. (2005) Comparative metage- nomics of microbial communities. Science 308: 554-557.
-
(2005)
Science
, vol.308
, pp. 554-557
-
-
Tringe, S.G.1
von Mering, C.2
Kobayashi, A.3
Salamov, A.A.4
Chen, K.5
Chang, H.W.6
-
71
-
-
0037297033
-
Physiological and molecular characterization of anaerobic benzene- degrading mixed cultures
-
Ulrich, A.C., and Edwards, E.A. (2003) Physiological and molecular characterization of anaerobic benzene- degrading mixed cultures. Environ Microbiol 5: 92-102.
-
(2003)
Environ Microbiol
, vol.5
, pp. 92-102
-
-
Ulrich, A.C.1
Edwards, E.A.2
-
73
-
-
0022468192
-
Incorporation of oxygen from water into toluene and benzene during anaerobic fermentative transformation
-
Vogel, T.M., and Grbic-Galic, D. (1986) Incorporation of oxygen from water into toluene and benzene during anaerobic fermentative transformation. Appl Environ Microbiol 52: 200-202.
-
(1986)
Appl Environ Microbiol
, vol.52
, pp. 200-202
-
-
Vogel, T.M.1
Grbic-Galic, D.2
-
74
-
-
34247139831
-
Physiological and phylogenetic characterization of a stable benzene-degrading, chlorate-reducing microbial community
-
Weelink, S.A.B., Tan, N.C.G., Broeke, H., Doesburg, W., Langenhoff, A.A.M., Gerritse, J., and Stams, A.J.M. (2007) Physiological and phylogenetic characterization of a stable benzene-degrading, chlorate-reducing microbial community. FEMS Microbiol Ecol 60: 312-321.
-
(2007)
FEMS Microbiol Ecol
, vol.60
, pp. 312-321
-
-
Weelink, S.A.B.1
Tan, N.C.G.2
Broeke, H.3
Doesburg, W.4
Langenhoff, A.A.M.5
Gerritse, J.6
Stams, A.J.M.7
-
75
-
-
0032078793
-
Rapid benzene degradation in methanogenic sediments from a petroleum- contaminated aquifer
-
Weiner, J., and Lovley, D.R. (1998) Rapid benzene degradation in methanogenic sediments from a petroleum- contaminated aquifer. Appl Environ Microbiol 64: 1937-1939.
-
(1998)
Appl Environ Microbiol
, vol.64
, pp. 1937-1939
-
-
Weiner, J.1
Lovley, D.R.2
-
76
-
-
0345195995
-
Determination of microbial diversity in environmental samples: Pitfalls of PCR-based rRNA analysis
-
von Wintzingerode, F.V., Goebel, J.B., and Stackebrandt, E. (1997) Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis. FEMS Microbiol Rev 21: 213-229.
-
(1997)
FEMS Microbiol Rev
, vol.21
, pp. 213-229
-
-
von Wintzingerode, F.V.1
Goebel, J.B.2
Stackebrandt, E.3
-
77
-
-
33646573004
-
Assessment of toluene/biphenyl dioxygenase gene diversity in benzene-polluted soils: Links between benzene biodegradation and genes similar to those encoding iso- propylbenzene dioxygenases
-
Witzig, R., Junca, H., Hecht, H.J., and Pieper, D.H. (2006) Assessment of toluene/biphenyl dioxygenase gene diversity in benzene-polluted soils: links between benzene biodegradation and genes similar to those encoding iso- propylbenzene dioxygenases. Appl Environ Microbiol 72: 3504-3514.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 3504-3514
-
-
Witzig, R.1
Junca, H.2
Hecht, H.J.3
Pieper, D.H.4
-
78
-
-
27844565255
-
-
T and IAM 12664 and Pseudomonas saccharophila as Azohydromonas lata gen. nov., comb. nov., Azohydromonas australica sp. nov. and Pelomonas saccharophila gen. nov., comb. nov., respectively. Int J Syst Evol Microbiol 55: 2419-2425.
-
T and IAM 12664 and Pseudomonas saccharophila as Azohydromonas lata gen. nov., comb. nov., Azohydromonas australica sp. nov. and Pelomonas saccharophila gen. nov., comb. nov., respectively. Int J Syst Evol Microbiol 55: 2419-2425.
-
-
-
|