메뉴 건너뛰기




Volumn 64, Issue 10, 1998, Pages 3869-3877

Microbial diversity in a hydrocarbon- and chlorinated-solvent- contaminated aquifer undergoing intrinsic bioremediation

Author keywords

[No Author keywords available]

Indexed keywords

AQUIFERS; BACTERIA; BIOREMEDIATION; CLONING; CONTAMINATION; ECOSYSTEMS; GENES; HYDROCARBONS; RNA; SOLVENTS;

EID: 0032189023     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.64.10.3869-3877.1998     Document Type: Article
Times cited : (622)

References (48)
  • 2
    • 0028946084 scopus 로고
    • Phylogenetic identification and in situ detection of individual microbial cells without cultivation
    • Amann, R. I., W. Ludwig, and K. H. Schleifer. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
    • (1995) Microbiol. Rev. , vol.59 , pp. 143-169
    • Amann, R.I.1    Ludwig, W.2    Schleifer, K.H.3
  • 3
    • 85005512152 scopus 로고
    • Organic acid derivatization techniques applied to petroleum hydrocarbon transformation in surface environments
    • Barcelona, M. J., J. Lu, and D. M. Tomczak. 1995. Organic acid derivatization techniques applied to petroleum hydrocarbon transformation in surface environments. Ground Water Monit. Remed. 15:114-124.
    • (1995) Ground Water Monit. Remed. , vol.15 , pp. 114-124
    • Barcelona, M.J.1    Lu, J.2    Tomczak, D.M.3
  • 4
    • 0028343555 scopus 로고
    • Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment
    • Barns, S. M., R. E. Fundyga, M. W. Jeffries, and N. R. Pace. 1994. Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment. Proc. Natl. Acad. Sci. USA 91:1609-1613.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 1609-1613
    • Barns, S.M.1    Fundyga, R.E.2    Jeffries, M.W.3    Pace, N.R.4
  • 5
    • 85052903888 scopus 로고
    • Natural bioremediation of hydrocarbon-contaminated ground water
    • R. D. Norris et al. (ed.), CRC Press, Inc., Boca Raton, Fla.
    • Borden, R. C. 1994. Natural bioremediation of hydrocarbon-contaminated ground water, p. 177-199. In R. D. Norris et al. (ed.), Handbook of bioremediation. CRC Press, Inc., Boca Raton, Fla.
    • (1994) Handbook of Bioremediation , pp. 177-199
    • Borden, R.C.1
  • 7
    • 0030860238 scopus 로고    scopus 로고
    • Molecular microbial diversity in soils from eastern Amazonia: Evidence for unusual microorganisms and microbial population shifts associated with deforestation
    • Borneman, J., and E. W. Triplett. 1997. Molecular microbial diversity in soils from eastern Amazonia: evidence for unusual microorganisms and microbial population shifts associated with deforestation. Appl. Environ. Microbiol. 63:2647-2653.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 2647-2653
    • Borneman, J.1    Triplett, E.W.2
  • 8
    • 0029935208 scopus 로고
    • Comparative analysis of ribonuclease P RNA using gene sequences from natural microbial populations reveals tertiary structural elements
    • Brown, J. W., J. M. Nolan, E. S. Haas, M. A. T. Rubio, F. Major, and N. R. Pace. 1995. Comparative analysis of ribonuclease P RNA using gene sequences from natural microbial populations reveals tertiary structural elements. Proc. Natl. Acad. Sci. USA 93:3001-3006.
    • (1995) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 3001-3006
    • Brown, J.W.1    Nolan, J.M.2    Haas, E.S.3    Rubio, M.A.T.4    Major, F.5    Pace, N.R.6
  • 9
    • 0024904092 scopus 로고
    • Hydrogen turnover by psychrotrophic homoacetogenic and mesophilic methanogenic bacteria in anoxic paddy soil and lake sediments
    • Conrad, R., F. Bak, H. J. Seitz, B. Thebrath, H. P. Mayer, and H. Schultz. 1989. Hydrogen turnover by psychrotrophic homoacetogenic and mesophilic methanogenic bacteria in anoxic paddy soil and lake sediments. FEMS Microbiol. Ecol. 62:285-294.
    • (1989) FEMS Microbiol. Ecol. , vol.62 , pp. 285-294
    • Conrad, R.1    Bak, F.2    Seitz, H.J.3    Thebrath, B.4    Mayer, H.P.5    Schultz, H.6
  • 10
    • 0029032318 scopus 로고
    • Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species
    • Farrelly, V., F. A. Rainey, and E. Stackebrandt. 1995. Effect of genome size and rrn gene copy number on PCR amplification of 16S rRNA genes from a mixture of bacterial species. Appl. Environ. Microbiol. 61:2798-2801.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 2798-2801
    • Farrelly, V.1    Rainey, F.A.2    Stackebrandt, E.3
  • 11
    • 0029798513 scopus 로고    scopus 로고
    • 16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the green non-sulfur bacteria
    • Giovannoni, S. J., M. S. Rappe, K. L. Vergin, and N. L. Adair. 1996. 16S rRNA genes reveal stratified open ocean bacterioplankton populations related to the green non-sulfur bacteria. Proc. Natl. Acad. Sci. USA 93:7979-7984.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 7979-7984
    • Giovannoni, S.J.1    Rappe, M.S.2    Vergin, K.L.3    Adair, N.L.4
  • 12
    • 0029667158 scopus 로고    scopus 로고
    • Detection of stratified microbial populations related to Chlorobium and Fibrobacter in the Atlantic and Pacific oceans
    • Gordon, D. A., and S. J. Giovannoni. 1996. Detection of stratified microbial populations related to Chlorobium and Fibrobacter in the Atlantic and Pacific oceans. Appl. Environ. Microbiol. 62:1171-1177.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 1171-1177
    • Gordon, D.A.1    Giovannoni, S.J.2
  • 13
    • 0028261409 scopus 로고
    • Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective
    • Gutell, R. R., N. Larsen, and C. R. Woese. 1994. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol. Rev. 58:10-26.
    • (1994) Microbiol. Rev. , vol.58 , pp. 10-26
    • Gutell, R.R.1    Larsen, N.2    Woese, C.R.3
  • 16
    • 0031662188 scopus 로고    scopus 로고
    • Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
    • Hugenholtz, P., B. M. Goebel, and N. R. Pace. 1998. Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity. J. Bacteriol. 180:4765-4774.
    • (1998) J. Bacteriol. , vol.180 , pp. 4765-4774
    • Hugenholtz, P.1    Goebel, B.M.2    Pace, N.R.3
  • 18
    • 0031912606 scopus 로고    scopus 로고
    • Novel division level bacterial diversity in a Yellowstone hot spring
    • Hugenholtz, P., C. Pitulle, K. L. Hershberger, and N. R. Pace. 1998. Novel division level bacterial diversity in a Yellowstone hot spring. J. Bacteriol. 180: 366-376.
    • (1998) J. Bacteriol. , vol.180 , pp. 366-376
    • Hugenholtz, P.1    Pitulle, C.2    Hershberger, K.L.3    Pace, N.R.4
  • 19
    • 0030201292 scopus 로고    scopus 로고
    • Intrinsic bioremediation of fuel contamination in ground water at a field site
    • Kampbell, D. H., T. H. Widemeier, and J. E. Hanses. 1996. Intrinsic bioremediation of fuel contamination in ground water at a field site. J. Hazard. Mater. 49:197-204.
    • (1996) J. Hazard. Mater. , vol.49 , pp. 197-204
    • Kampbell, D.H.1    Widemeier, T.H.2    Hanses, J.E.3
  • 20
    • 0030868433 scopus 로고    scopus 로고
    • Diverse uncultivated bacterial groups from soils of the arid southwestern United States that are present in many geographic regions
    • Kuske, C. R., S. M. Barns, and J. D. Busch. 1997. Diverse uncultivated bacterial groups from soils of the arid southwestern United States that are present in many geographic regions. Appl. Environ. Microbiol. 63:3614-3621.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 3614-3621
    • Kuske, C.R.1    Barns, S.M.2    Busch, J.D.3
  • 21
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • E. Stackebrandt and M. Goodfellow (ed.), John Wiley & Sons, Inc., New York, N.Y.
    • Lane, D. J. 1991. 16S/23S rRNA sequencing, p. 115-175. In E. Stackebrandt and M. Goodfellow (ed.), Nucleic acid techniques in bacterial systematics. John Wiley & Sons, Inc., New York, N.Y.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics , pp. 115-175
    • Lane, D.J.1
  • 23
    • 0026764237 scopus 로고
    • Occurrence of novel groups of the domain Bacteria as revealed by analysis of genetic material isolated from an Australian terrestrial environment
    • Liesack, W., and E. Stackebrandt. 1992. Occurrence of novel groups of the domain Bacteria as revealed by analysis of genetic material isolated from an Australian terrestrial environment. J. Bacteriol. 174:5072-5078.
    • (1992) J. Bacteriol. , vol.174 , pp. 5072-5078
    • Liesack, W.1    Stackebrandt, E.2
  • 26
    • 0030620440 scopus 로고    scopus 로고
    • Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara channel
    • Massana, R., A. E. Murray, C. M. Preston, and E. F. DeLong. 1997. Vertical distribution and phylogenetic characterization of marine planktonic Archaea in the Santa Barbara channel. Appl. Environ. Microbiol. 63:50-56.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 50-56
    • Massana, R.1    Murray, A.E.2    Preston, C.M.3    DeLong, E.F.4
  • 28
    • 0002097673 scopus 로고
    • Acetogenesis at low temperature
    • H. L. Drake (ed.), Chapman & Hall, Ltd., London, England
    • Nozhevnikova, A. N., O. R. Kotsyurbenko, and M. V. Simankova. 1994. Acetogenesis at low temperature, p. 416-431. In H. L. Drake (ed.), Acetogenesis. Chapman & Hall, Ltd., London, England.
    • (1994) Acetogenesis , pp. 416-431
    • Nozhevnikova, A.N.1    Kotsyurbenko, O.R.2    Simankova, M.V.3
  • 29
    • 0030031972 scopus 로고    scopus 로고
    • Phylogenetic diversity of the intestinal bacterial community in the termite Reticulitermes speratus
    • Ohkuma, M., and T. Kudo. 1996. Phylogenetic diversity of the intestinal bacterial community in the termite Reticulitermes speratus. Appl. Environ. Microbiol. 62:461-468.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 461-468
    • Ohkuma, M.1    Kudo, T.2
  • 30
    • 0030982247 scopus 로고    scopus 로고
    • A molecular view of microbial diversity and the biosphere
    • Pace, N. R. 1997. A molecular view of microbial diversity and the biosphere. Science 276:734-740.
    • (1997) Science , vol.276 , pp. 734-740
    • Pace, N.R.1
  • 31
    • 0002861821 scopus 로고
    • Analyzing natural microbial populations by rRNA sequences
    • Pace, N. R., D. A. Stahl, D. J. Lane, and G. J. Olsen. 1985. Analyzing natural microbial populations by rRNA sequences. ASM News 51:4-12.
    • (1985) ASM News , vol.51 , pp. 4-12
    • Pace, N.R.1    Stahl, D.A.2    Lane, D.J.3    Olsen, G.J.4
  • 32
    • 0029660705 scopus 로고    scopus 로고
    • Competition and coexistence of sulfate-reducing and methanogenic populations in anaerobic biofilms
    • Raskin, L., B. E. Rittman, and D. A. Stahl. 1996. Competition and coexistence of sulfate-reducing and methanogenic populations in anaerobic biofilms. Appl. Environ. Microbiol. 62:3847-3857.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 3847-3857
    • Raskin, L.1    Rittman, B.E.2    Stahl, D.A.3
  • 34
    • 0030871461 scopus 로고    scopus 로고
    • Energetics of syntrophic cooperation in methanogenic degradation
    • Schink, B. 1997. Energetics of syntrophic cooperation in methanogenic degradation. Microbiol. Mol. Biol. Rev. 61:262-280.
    • (1997) Microbiol. Mol. Biol. Rev. , vol.61 , pp. 262-280
    • Schink, B.1
  • 35
    • 1842330944 scopus 로고    scopus 로고
    • Energetics of methanogenic benzoate degradation by Syntrophus gentianae in syntrophic coculture
    • Schocke, L., and B. Schink. 1997. Energetics of methanogenic benzoate degradation by Syntrophus gentianae in syntrophic coculture. Microbiology 143:2345-2351.
    • (1997) Microbiology , vol.143 , pp. 2345-2351
    • Schocke, L.1    Schink, B.2
  • 36
    • 0029659727 scopus 로고    scopus 로고
    • Influence of temperature on pathways to methane production in the permanently cold profundal sediment of Lake Constance
    • Schulz, S., and R. Conrad. 1996. Influence of temperature on pathways to methane production in the permanently cold profundal sediment of Lake Constance. FEMS Microb. Ecol. 20:1-14.
    • (1996) FEMS Microb. Ecol. , vol.20 , pp. 1-14
    • Schulz, S.1    Conrad, R.2
  • 37
    • 0031105939 scopus 로고    scopus 로고
    • Temperature dependence of methane production from different precursors in a profundal sediment (Lake Constance)
    • Schulz, S., H. Matsuyama, and R. Conrad. 1997. Temperature dependence of methane production from different precursors in a profundal sediment (Lake Constance). FEMS Microbiol. Ecol. 22:207-213.
    • (1997) FEMS Microbiol. Ecol. , vol.22 , pp. 207-213
    • Schulz, S.1    Matsuyama, H.2    Conrad, R.3
  • 38
    • 0030741576 scopus 로고    scopus 로고
    • Phylogenetic analysis and in situ identification of bacteria in activated sludge
    • Snaidr, J., R. Amann, I. Huber, W. Ludwig, and K.-H. Schleifer. 1997. Phylogenetic analysis and in situ identification of bacteria in activated sludge. Appl. Environ. Microbiol. 63:2884-2896.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 2884-2896
    • Snaidr, J.1    Amann, R.2    Huber, I.3    Ludwig, W.4    Schleifer, K.-H.5
  • 39
    • 0027441283 scopus 로고
    • Bacterial diversity in a soil sample from a subtropical Australian environment as determined by 16S rDNA analysis
    • Stackebrandt, E., W. Liesack, and B. M. Goebel. 1993. Bacterial diversity in a soil sample from a subtropical Australian environment as determined by 16S rDNA analysis. FASEB J. 7:232-236.
    • (1993) FASEB J. , vol.7 , pp. 232-236
    • Stackebrandt, E.1    Liesack, W.2    Goebel, B.M.3
  • 41
    • 0030067991 scopus 로고    scopus 로고
    • Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR
    • Suzuki, M. T., and S. J. Giovannoni. 1996. Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR. Appl. Environ. Microbiol. 62:625-630.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 625-630
    • Suzuki, M.T.1    Giovannoni, S.J.2
  • 42
    • 0031904685 scopus 로고    scopus 로고
    • Specific ribosomal DNA sequences from diverse environmental settings correlate with experimental contaminants
    • Tanner, M., B. M. Goebel, M. A. Dojka, and N. R. Pace. 1998. Specific ribosomal DNA sequences from diverse environmental settings correlate with experimental contaminants. Appl. Environ. Microbiol. 64:3110-3113.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3110-3113
    • Tanner, M.1    Goebel, B.M.2    Dojka, M.A.3    Pace, N.R.4
  • 43
    • 0008884734 scopus 로고    scopus 로고
    • U.S. Environmental Protection Agency, Washington, D.C.
    • Tulis, D. S. 1997. Issues associated with natural attenuation. U.S. Environmental Protection Agency, Washington, D.C. http://www.epa.gov/OUST/ rbdm/issues.htm.
    • (1997) Issues Associated with Natural Attenuation
    • Tulis, D.S.1
  • 46
    • 0029015057 scopus 로고
    • Pure culture of Syntrophus buswellii, definition of its phylogenetic status, and description of Syntrophic gentianae sp. nov.
    • Wallrabenstein, C., N. Gorny, N. Springer, W. Ludwig, and B. Schink. 1995. Pure culture of Syntrophus buswellii, definition of its phylogenetic status, and description of Syntrophic gentianae sp. nov. Syst. Appl. Microbiol. 18:62-66.
    • (1995) Syst. Appl. Microbiol. , vol.18 , pp. 62-66
    • Wallrabenstein, C.1    Gorny, N.2    Springer, N.3    Ludwig, W.4    Schink, B.5
  • 47
    • 0001543470 scopus 로고
    • The methanogenic bacteria
    • A. Balows, H. G. Truper, M. Dworkin, W. Harder, and K. H. Schleifer (ed.), Springer-Verlag, New York, N.Y.
    • Whitman, W. B., T. L. Bowen, and D. R. Bonne. 1992. The methanogenic bacteria, p. 739-745. In A. Balows, H. G. Truper, M. Dworkin, W. Harder, and K. H. Schleifer (ed.), The prokaryotes, vol. 1. Springer-Verlag, New York, N.Y.
    • (1992) The Prokaryotes , vol.1 , pp. 739-745
    • Whitman, W.B.1    Bowen, T.L.2    Bonne, D.R.3
  • 48
    • 0001183188 scopus 로고
    • Ecology of methane formation
    • R. Mitchell (ed.), John Wiley & Sons, London, England
    • Zehnder, A. J. B. 1978. Ecology of methane formation, p. 349-376. In R. Mitchell (ed.), Water pollution microbiology. John Wiley & Sons, London, England.
    • (1978) Water Pollution Microbiology , pp. 349-376
    • Zehnder, A.J.B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.