메뉴 건너뛰기




Volumn 10, Issue 1, 2011, Pages 595-612

A simple mass-action model for the eukaryotic heat shock response and its mathematical validation

Author keywords

Heat shock element; Heat shock factor; Heat shock protein; Heat shock response; Mathematical model; Regulatory network; Validation

Indexed keywords

HEAT SHOCK PROTEIN;

EID: 79952755504     PISSN: 15677818     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11047-010-9216-y     Document Type: Conference Paper
Times cited : (55)

References (38)
  • 1
    • 0025935407 scopus 로고
    • Attenuation of the heat shock response in HeLa cells is mediated by the release of bound heat shock transcription factor and is modulated by changes in growth and in heat shock temperatures
    • K Abravaya B Philips RI Morimoto 1991 Attenuation of the heat-shock response in Hela-cells is mediated by the release of bound heat-shock transcription factor and is modulated by changes in growth and in heat-shock temperatures Genes Dev 5 11 2117 2127 10.1101/gad.5.11.2117 (Pubitemid 21905903)
    • (1991) Genes and Development , vol.5 , Issue.11 , pp. 2117-2127
    • Abravaya, K.1    Phillips, B.2    Morimoto, R.I.3
  • 2
    • 0026665975 scopus 로고
    • Human heat shock protein HSP70 interacts with HSF, the transcription factor that regulates heat shock gene expression
    • 10.1101/gad.6.7.1153
    • K Abravaya M Myers S Murphy RI Morimoto 1992 Human heat shock protein HSP70 interacts with HSF, the transcription factor that regulates heat shock gene expression Genes Dev 6 1153 1164 10.1101/gad.6.7.1153
    • (1992) Genes Dev , vol.6 , pp. 1153-1164
    • Abravaya, K.1    Myers, M.2    Murphy, S.3    Morimoto, R.I.4
  • 3
    • 39349083915 scopus 로고    scopus 로고
    • Adapting proteostasis for disease intervention
    • DOI 10.1126/science.1141448
    • WE Balch RI Morimoto A Dillin JW Kelly 2008 Adapting proteostasis for disease intervention Science 319 916 919 10.1126/science.1141448 (Pubitemid 351263754)
    • (2008) Science , vol.319 , Issue.5865 , pp. 916-919
    • Balch, W.E.1    Morimoto, R.I.2    Dillin, A.3    Kelly, J.W.4
  • 5
    • 34250329955 scopus 로고    scopus 로고
    • Heat stock paradox and a new role of heat shock proteins and their receptors as anti-inflammation targets
    • Y Chen TS Voegli PP Liu EG Noble RW Currie 2007 Heat shock paradox and a new role of heat shock proteins and their receptors as anti-inflammation targets Inflamm Allergy Drug Targets 6 2 91 100 10.2174/187152807780832274 (Pubitemid 46916287)
    • (2007) Inflammation and Allergy - Drug Targets , vol.6 , Issue.2 , pp. 91-100
    • Chen, Y.1    Voegeli, T.S.2    Liu, P.P.3    Noble, E.G.4    Curie, R.W.5
  • 7
    • 21744445069 scopus 로고    scopus 로고
    • Heat shock proteins in cancer: Diagnostic, prognostic, predictive, and treatment implications
    • DOI 10.1379/CSC-99r.1, csac. 2005.CSC-99r
    • DR Ciocca SK Calderwood 2005 Heat shock proteins in cancer: diagnostic, prognostic, predictive, and treatment implications Cell Stress Chaperones 10 2 86 103 10.1379/CSC-99r.1 (Pubitemid 40942470)
    • (2005) Cell Stress and Chaperones , vol.10 , Issue.2 , pp. 86-103
    • Ciocca, D.R.1    Calderwood, S.K.2
  • 8
    • 0025639087 scopus 로고
    • Oxidative injury and the heat shock response
    • 10.1016/0006-2952(90)90573-4
    • YRA Donati DO Slosman BS Polla 1990 Oxidative injury and the heat shock response Biochem Pharmacol 40 2571 2577 10.1016/0006-2952(90)90573-4
    • (1990) Biochem Pharmacol , vol.40 , pp. 2571-2577
    • Donati, Y.R.A.1    Slosman, D.O.2    Polla, B.S.3
  • 12
    • 0036080354 scopus 로고    scopus 로고
    • Illustration of sampling-based methods for uncertainty and sensitivity analysis
    • DOI 10.1111/0272-4332.00041
    • JC Helton FJ Davis 2002 Illustration of sampling-based methods for uncertainty and sensitivity analysis Risk Anal 22 3 591 622 10.1111/0272-4332. 00041 (Pubitemid 34657259)
    • (2002) Risk Analysis , vol.22 , Issue.3 , pp. 591-622
    • Helton, J.C.1    Davis, F.J.2
  • 13
    • 0038476492 scopus 로고    scopus 로고
    • Latin hypercube sampling and the propagation of uncertainty in analyses of complex systems
    • 10.1016/S0951-8320(03)00058-9
    • JC Helton FJ Davis 2003 Latin hypercube sampling and the propagation of uncertainty in analyses of complex systems Reliab Eng Syst Saf 81 23 69 10.1016/S0951-8320(03)00058-9
    • (2003) Reliab Eng Syst Saf , vol.81 , pp. 23-69
    • Helton, J.C.1    Davis, F.J.2
  • 14
    • 0036901003 scopus 로고    scopus 로고
    • Multisite phosphorylation provides sophisticated regulation of transcription factors
    • DOI 10.1016/S0968-0004(02)02207-7, PII S0968000402022077
    • CI Holmberg SE Tran JE Eriksson L Sistonen 2002 Multisite phosphorylation provides sophisticated regulation of transcription factors Trends Biochem Sci 27 12 619 627 10.1016/S0968-0004(02)02207-7 (Pubitemid 35435311)
    • (2002) Trends in Biochemical Sciences , vol.27 , Issue.12 , pp. 619-627
    • Holmberg, C.I.1    Tran, S.E.F.2    Eriksson, J.E.3    Sistonen, L.4
  • 17
    • 0030988941 scopus 로고    scopus 로고
    • Repression of the heat shock factor 1 transcriptional activation domain is modulated by constitutive phosphorylation
    • MP Kline RI Morimoto 1997 Repression of the heat shock factor 1 transcriptional activation domain is modulated by constitutive phosphorylation Mol Cell Biol 17 4 2107 2115 (Pubitemid 27133296)
    • (1997) Molecular and Cellular Biology , vol.17 , Issue.4 , pp. 2107-2115
    • Kline, M.P.1    Morimoto, R.I.2
  • 18
    • 0027199872 scopus 로고
    • Protein denaturation in intact hepatocytes and isolated cellular organelles during heat shock
    • JR Lepock HE Frey KP Ritchie 1993 Protein denaturation in intact hepatocytes and isolated cellular organelles during heat shock J Cell Biol 122 6 1267 1276 10.1083/jcb.122.6.1267 (Pubitemid 23277295)
    • (1993) Journal of Cell Biology , vol.122 , Issue.6 , pp. 1267-1276
    • Lepock, J.R.1    Frey, H.E.2    Ritchie, K.P.3
  • 19
    • 35748937332 scopus 로고    scopus 로고
    • Heat shock response in CHO mammalian cells is controlled by a nonlinear stochastic process
    • DOI 10.1371/journal.pcbi.0030187
    • O Lipan J-M Navenot Z Wang L Huang SC Peiper 2007 Heat shock response in CHO mammalian cells is controlled by a nonlinear stochastic process PLoS Comput Biol 3 10 1859 1870 2369324 10.1371/journal.pcbi.0030187 (Pubitemid 350043402)
    • (2007) PLoS Computational Biology , vol.3 , Issue.10 , pp. 1859-1870
    • Lipan, O.1    Navenot, J.-M.2    Wang, Z.3    Huang, L.4    Peiper, S.C.5
  • 20
    • 0018468345 scopus 로고
    • A comparison of three methods for selecting values of input variables in the analysis of output from a computer code
    • McKay MD, Beckman RJ, Conover WJ (1979) A comparison of three methods for selecting values of input variables in the analysis of output from a computer code. Technometrics 21(2):239-245 (Pubitemid 9452235)
    • (1979) Technometrics , vol.21 , Issue.2 , pp. 239-245
    • McKay, M.D.1    Beckman, R.J.2    Conover, W.J.3
  • 21
    • 0032535245 scopus 로고    scopus 로고
    • Regulation of the heat shock transcriptional response: Cross talk between a family of heat shock factors, molecular chaperones, and negative regulators
    • RI Morimoto 1998 Regulation of the heat shock transcriptional response: cross talk between a family of heat shock factors, molecular chaperones, and negative regulators Genes Dev 12 3788 3796 10.1101/gad.12.24.3788 (Pubitemid 29024840)
    • (1998) Genes and Development , vol.12 , Issue.24 , pp. 3788-3796
    • Morimoto, R.I.1
  • 22
    • 44849094781 scopus 로고    scopus 로고
    • Proteotoxic stress and inducible chaperone networks in neurodegenerative disease and aging
    • DOI 10.1101/gad.1657108
    • RI Morimoto 2008 Proteotoxic stress and inducible chaperone networks in neurodegenerative disease and aging Genes Dev 22 1427 1438 10.1101/gad.1657108 (Pubitemid 351793077)
    • (2008) Genes and Development , vol.22 , Issue.11 , pp. 1427-1438
    • Morimoto, R.I.1
  • 23
    • 0000452950 scopus 로고
    • Regulation of heat shock gene transcription by a family of heat shock factors
    • Morimoto RI, Tissières A, Georgopoulos C (eds) Cold Spring Harbor Laboratory, New York
    • Morimoto RI, Jurivich DA, Kroger PE, Mathur SK, Murphy SP, et al (1994) Regulation of heat shock gene transcription by a family of heat shock factors. In: Morimoto RI, Tissières A, Georgopoulos C (eds) The biology of the heat shock proteins and molecular chaperones. Cold Spring Harbor Laboratory, New York, pp. 417-455
    • (1994) The Biology of the Heat Shock Proteins and Molecular Chaperones , pp. 417-455
    • Morimoto, R.I.1    Jurivich, D.A.2    Kroger, P.E.3    Mathur, S.K.4    Murphy, S.P.5
  • 24
    • 62949120472 scopus 로고    scopus 로고
    • Classical and imprecise probability methods for sensitivity analysis in engineering: A case study
    • 10.1016/j.ijar.2008.09.004
    • M Oberguggenberger J King B Schmelzer 2009 Classical and imprecise probability methods for sensitivity analysis in engineering: a case study Int J Approx Reason 50 680 693 10.1016/j.ijar.2008.09.004
    • (2009) Int J Approx Reason , vol.50 , pp. 680-693
    • Oberguggenberger, M.1    King, J.2    Schmelzer, B.3
  • 25
    • 0027135501 scopus 로고
    • The function of heat-shock proteins in stress tolerance: Degradation and reactivation of damaged proteins
    • DA Parsell S Lindquist 1993 The function of heat-shock proteins in stress tolerance: degradation and reactivation of damaged proteins Ann Rev Genetics 27 437 496 10.1146/annurev.ge.27.120193.002253 (Pubitemid 24011359)
    • (1993) Annual Review of Genetics , vol.27 , pp. 437-496
    • Parsell, D.A.1    Lindquist, S.2
  • 28
    • 0042235547 scopus 로고    scopus 로고
    • Heat shock proteins as regulators of the immune response
    • DOI 10.1016/S0140-6736(03)14075-5
    • AG Pockley 2003 Heat shock proteins as regulators of the immune response The Lancet 362 9382 469 476 10.1016/S0140-6736(03)14075-5 (Pubitemid 36999714)
    • (2003) Lancet , vol.362 , Issue.9382 , pp. 469-476
    • Pockley, A.G.1
  • 29
    • 34447507818 scopus 로고    scopus 로고
    • Inhibitors of the heat shock response: Biology and pharmacology
    • DOI 10.1016/j.febslet.2007.05.040, PII S0014579307005686, Cellular Stress
    • MV Powers P Workman 2007 Inhibitors of the heat shock response: biology and pharmacology FEBS Lett 581 19 3758 3769 10.1016/j.febslet.2007.05.040 (Pubitemid 47081010)
    • (2007) FEBS Letters , vol.581 , Issue.19 , pp. 3758-3769
    • Powers, M.V.1    Workman, P.2
  • 31
    • 21244495733 scopus 로고    scopus 로고
    • Mathematical modeling of the eukaryotic heat-shock response: Dynamics of the hsp70 promoter
    • DOI 10.1529/biophysj.104.055301
    • TR Rieger RI Morimoto V Hatzimanikatis 2005 Mathematical modeling of the eukaryotic heat shock response: dynamics of the Hsp70 promoter Biophys J 88 1646 1658 10.1529/biophysj.104.055301 (Pubitemid 40976181)
    • (2005) Biophysical Journal , vol.88 , Issue.3 , pp. 1646-1658
    • Rieger, T.R.1    Morimoto, R.I.2    Hatzimanikatis, V.3
  • 32
    • 0032031725 scopus 로고    scopus 로고
    • Molecular chaperones as HSF1-specific transcriptional repressors
    • Y Shi D Mosser RI Morimoto 1998 Molecular chaperones as HSF1 specific transcriptional repressors Genes Dev 12 654 666 10.1101/gad.12.5.654 (Pubitemid 28134298)
    • (1998) Genes and Development , vol.12 , Issue.5 , pp. 654-666
    • Shi, Y.1    Mosser, D.D.2    Morimoto, R.I.3
  • 34
    • 67649986042 scopus 로고    scopus 로고
    • Mathematical modeling of heat shock protein synthesis in response to temperature change
    • 10.1016/j.jtbi.2009.03.021
    • Z Szymańska M Zylicz 2009 Mathematical modeling of heat shock protein synthesis in response to temperature change J Theoret Biol 259 562 569 10.1016/j.jtbi.2009.03.021
    • (2009) J Theoret Biol , vol.259 , pp. 562-569
    • Szymańska, Z.1    Zylicz, M.2
  • 35
    • 0000481011 scopus 로고
    • Sensitivity analysis of complex kinetic systems-tools and applications
    • 1079660 10.1007/BF01166355
    • T Turanyi 1990 Sensitivity analysis of complex kinetic systems-tools and applications J Math Chem 5 3 203 248 1079660 10.1007/BF01166355
    • (1990) J Math Chem , vol.5 , Issue.3 , pp. 203-248
    • Turanyi, T.1
  • 36
    • 34547192041 scopus 로고    scopus 로고
    • HSP-90 inhibitors promise to complement cancer therapies
    • 10.1038/nbt1106-1307
    • B Vastag 2006 HSP-90 inhibitors promise to complement cancer therapies Nat Biotechnol 24 11 1307 10.1038/nbt1106-1307
    • (2006) Nat Biotechnol , vol.24 , Issue.11 , pp. 1307
    • Vastag, B.1
  • 37
    • 0028966256 scopus 로고
    • Transduction of the stress signal and mechanisms of transcriptional regulation of heat shock/stress protein gene expression in higher eukaryotes
    • R Voellmy 1994 Transduction of the stress signal and mechanisms of transcriptional regulation of heat shock/stress protein gene expression in higher eukaryotes Crit Rev Eukaryot Gene Expr 4 357 401
    • (1994) Crit Rev Eukaryot Gene Expr , vol.4 , pp. 357-401
    • Voellmy, R.1
  • 38
    • 84934440933 scopus 로고    scopus 로고
    • Chaperone regulation of the heat shock protein response
    • 10.1007/978-0-387-39975-1-9
    • R Voellmy F Boellmann 2007 Chaperone regulation of the heat shock protein response Adv Exp Med Biol 594 89 99 10.1007/978-0-387-39975-1-9
    • (2007) Adv Exp Med Biol , vol.594 , pp. 89-99
    • Voellmy, R.1    Boellmann, F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.