-
1
-
-
74049160009
-
Mechanisms maintaining peripheral tolerance
-
Mueller DL, (2010) Mechanisms maintaining peripheral tolerance. Nat Immunol 11: 21-27.
-
(2010)
Nat Immunol
, vol.11
, pp. 21-27
-
-
Mueller, D.L.1
-
2
-
-
70350439671
-
An endogenous peptide positively selects and augments the activation and survival of peripheral CD4+ T cells
-
Lo WL, Felix NJ, Walters JJ, Rohrs H, Gross ML, et al. (2009) An endogenous peptide positively selects and augments the activation and survival of peripheral CD4+ T cells. Nat Immunol 10: 1155-1161.
-
(2009)
Nat Immunol
, vol.10
, pp. 1155-1161
-
-
Lo, W.L.1
Felix, N.J.2
Walters, J.J.3
Rohrs, H.4
Gross, M.L.5
-
3
-
-
0029855347
-
Structure of the complex between human T-cell receptor, viral peptide and HLA-A2
-
Garboczi DN, Ghosh P, Utz U, Fan QR, Biddison WE, et al. (1996) Structure of the complex between human T-cell receptor, viral peptide and HLA-A2. Nature 384: 134-141.
-
(1996)
Nature
, vol.384
, pp. 134-141
-
-
Garboczi, D.N.1
Ghosh, P.2
Utz, U.3
Fan, Q.R.4
Biddison, W.E.5
-
4
-
-
58649114309
-
The molecular basis of TCR germline bias for MHC is surprisingly simple
-
Garcia KC, Adams JJ, Feng D, Ely LK, (2009) The molecular basis of TCR germline bias for MHC is surprisingly simple. Nat Immunol 10: 143-147.
-
(2009)
Nat Immunol
, vol.10
, pp. 143-147
-
-
Garcia, K.C.1
Adams, J.J.2
Feng, D.3
Ely, L.K.4
-
5
-
-
0003958960
-
The T cell receptor FactsBook
-
San Diego, Academic Press
-
Lefranc MP, Lefranc G, (2001) The T cell receptor FactsBook. San Diego Academic Press.
-
(2001)
-
-
Lefranc, M.P.1
Lefranc, G.2
-
6
-
-
21444450056
-
IMGT unique numbering for MHC groove G-DOMAIN and MHC superfamily (MhcSF) G-LIKE-DOMAIN
-
Lefranc MP, Duprat E, Kaas Q, Tranne M, Thiriot A, et al. (2005) IMGT unique numbering for MHC groove G-DOMAIN and MHC superfamily (MhcSF) G-LIKE-DOMAIN. Dev Comp Immunol 29: 917-938.
-
(2005)
Dev Comp Immunol
, vol.29
, pp. 917-938
-
-
Lefranc, M.P.1
Duprat, E.2
Kaas, Q.3
Tranne, M.4
Thiriot, A.5
-
7
-
-
2942740952
-
The somatic generation of immune recognition. 1971
-
Jerne NK, (2004) The somatic generation of immune recognition. 1971. Eur J Immunol 34: 1234-1242.
-
(2004)
Eur J Immunol
, vol.34
, pp. 1234-1242
-
-
Jerne, N.K.1
-
8
-
-
77957258599
-
pDOCK: a new technique for rapid and accurate docking of peptide ligands to Major Histocompatibility Complexes
-
Khan JM, Ranganathan S, (2010) pDOCK: a new technique for rapid and accurate docking of peptide ligands to Major Histocompatibility Complexes. Immunome Res 6 (Suppl 1): S2.
-
(2010)
Immunome Res
, vol.6
, Issue.SUPPL. 1
-
-
Khan, J.M.1
Ranganathan, S.2
-
9
-
-
0033954256
-
The Protein Data Bank
-
Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, et al. (2000) The Protein Data Bank. Nucleic Acids Res 28: 235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
-
10
-
-
0347755625
-
IMGT/3Dstructure-DB and IMGT/StructuralQuery, a database and a tool for immunoglobulin, T cell receptor and MHC structural data
-
Kaas Q, Ruiz M, Lefranc MP, (2004) IMGT/3Dstructure-DB and IMGT/StructuralQuery, a database and a tool for immunoglobulin, T cell receptor and MHC structural data. Nucleic Acids Res 32: D208-210.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Kaas, Q.1
Ruiz, M.2
Lefranc, M.P.3
-
11
-
-
75549091258
-
IMGT/3Dstructure-DB and IMGT/DomainGapAlign: a database and a tool for immunoglobulins or antibodies, T cell receptors, MHC, IgSF and MhcSF
-
Ehrenmann F, Kaas Q, Lefranc MP, (2010) IMGT/3Dstructure-DB and IMGT/DomainGapAlign: a database and a tool for immunoglobulins or antibodies, T cell receptors, MHC, IgSF and MhcSF. Nucleic Acids Res 38: D301-307.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Ehrenmann, F.1
Kaas, Q.2
Lefranc, M.P.3
-
12
-
-
47649130715
-
Thermodynamics of T-cell receptor-peptide/MHC interactions: progress and opportunities
-
Armstrong KM, Insaidoo FK, Baker BM, (2008) Thermodynamics of T-cell receptor-peptide/MHC interactions: progress and opportunities. J Mol Recognit 21: 275-287.
-
(2008)
J Mol Recognit
, vol.21
, pp. 275-287
-
-
Armstrong, K.M.1
Insaidoo, F.K.2
Baker, B.M.3
-
13
-
-
19944430890
-
A major histocompatibility complex-peptide-restricted antibody and t cell receptor molecules recognize their target by distinct binding modes: crystal structure of human leukocyte antigen (HLA)-A1-MAGE-A1 in complex with FAB-HYB3
-
Hulsmeyer M, Chames P, Hillig RC, Stanfield RL, Held G, et al. (2005) A major histocompatibility complex-peptide-restricted antibody and t cell receptor molecules recognize their target by distinct binding modes: crystal structure of human leukocyte antigen (HLA)-A1-MAGE-A1 in complex with FAB-HYB3. J Biol Chem 280: 2972-2980.
-
(2005)
J Biol Chem
, vol.280
, pp. 2972-2980
-
-
Hulsmeyer, M.1
Chames, P.2
Hillig, R.C.3
Stanfield, R.L.4
Held, G.5
-
14
-
-
5944249467
-
Crystal structure of a T cell receptor bound to an allogeneic MHC molecule
-
Reiser JB, Darnault C, Guimezanes A, Gregoire C, Mosser T, et al. (2000) Crystal structure of a T cell receptor bound to an allogeneic MHC molecule. Nat Immunol 1: 291-297.
-
(2000)
Nat Immunol
, vol.1
, pp. 291-297
-
-
Reiser, J.B.1
Darnault, C.2
Guimezanes, A.3
Gregoire, C.4
Mosser, T.5
-
15
-
-
33646181088
-
How TCRs bind MHCs, peptides, and coreceptors
-
Rudolph MG, Stanfield RL, Wilson IA, (2006) How TCRs bind MHCs, peptides, and coreceptors. Annu Rev Immunol 24: 419-466.
-
(2006)
Annu Rev Immunol
, vol.24
, pp. 419-466
-
-
Rudolph, M.G.1
Stanfield, R.L.2
Wilson, I.A.3
-
16
-
-
0034329441
-
Structure of a covalently stabilized complex of a human alphabeta T-cell receptor, influenza HA peptide and MHC class II molecule, HLA-DR1
-
Hennecke J, Carfi A, Wiley DC, (2000) Structure of a covalently stabilized complex of a human alphabeta T-cell receptor, influenza HA peptide and MHC class II molecule, HLA-DR1. EMBO J 19: 5611-5624.
-
(2000)
EMBO J
, vol.19
, pp. 5611-5624
-
-
Hennecke, J.1
Carfi, A.2
Wiley, D.C.3
-
17
-
-
0038300653
-
A structural basis for immunodominant human T cell receptor recognition
-
Stewart-Jones GB, McMichael AJ, Bell JI, Stuart DI, Jones EY, (2003) A structural basis for immunodominant human T cell receptor recognition. Nat Immunol 4: 657-663.
-
(2003)
Nat Immunol
, vol.4
, pp. 657-663
-
-
Stewart-Jones, G.B.1
McMichael, A.J.2
Bell, J.I.3
Stuart, D.I.4
Jones, E.Y.5
-
18
-
-
0033165928
-
Four A6-TCR/peptide/HLA-A2 structures that generate very different T cell signals are nearly identical
-
Ding YH, Baker BM, Garboczi DN, Biddison WE, Wiley DC, (1999) Four A6-TCR/peptide/HLA-A2 structures that generate very different T cell signals are nearly identical. Immunity 11: 45-56.
-
(1999)
Immunity
, vol.11
, pp. 45-56
-
-
Ding, Y.H.1
Baker, B.M.2
Garboczi, D.N.3
Biddison, W.E.4
Wiley, D.C.5
-
19
-
-
26644468528
-
Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule
-
Li Y, Huang Y, Lue J, Quandt JA, Martin R, et al. (2005) Structure of a human autoimmune TCR bound to a myelin basic protein self-peptide and a multiple sclerosis-associated MHC class II molecule. EMBO J 24: 2968-2979.
-
(2005)
EMBO J
, vol.24
, pp. 2968-2979
-
-
Li, Y.1
Huang, Y.2
Lue, J.3
Quandt, J.A.4
Martin, R.5
-
20
-
-
34248530182
-
Structural basis for the recognition of mutant self by a tumor-specific, MHC class II-restricted T cell receptor
-
Deng L, Langley RJ, Brown PH, Xu G, Teng L, et al. (2007) Structural basis for the recognition of mutant self by a tumor-specific, MHC class II-restricted T cell receptor. Nat Immunol 8: 398-408.
-
(2007)
Nat Immunol
, vol.8
, pp. 398-408
-
-
Deng, L.1
Langley, R.J.2
Brown, P.H.3
Xu, G.4
Teng, L.5
-
21
-
-
0000184631
-
Electrostatic potential molecular surfaces
-
Weiner PK, Langridge R, Blaney JM, Schaefer R, Kollman PA, (1982) Electrostatic potential molecular surfaces. Proc Natl Acad Sci U S A 79: 3754-3758.
-
(1982)
Proc Natl Acad Sci U S A
, vol.79
, pp. 3754-3758
-
-
Weiner, P.K.1
Langridge, R.2
Blaney, J.M.3
Schaefer, R.4
Kollman, P.A.5
-
22
-
-
0035964342
-
Electrostatics of nanosystems: application to microtubules and the ribosome
-
Baker NA, Sept D, Joseph S, Holst MJ, McCammon JA, (2001) Electrostatics of nanosystems: application to microtubules and the ribosome. Proc Natl Acad Sci U S A 98: 10037-10041.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
Sept, D.2
Joseph, S.3
Holst, M.J.4
McCammon, J.A.5
-
23
-
-
34548826509
-
Single MHC mutation eliminates enthalpy associated with T cell receptor binding
-
Miller PJ, Pazy Y, Conti B, Riddle D, Appella E, et al. (2007) Single MHC mutation eliminates enthalpy associated with T cell receptor binding. J Mol Biol 373: 315-327.
-
(2007)
J Mol Biol
, vol.373
, pp. 315-327
-
-
Miller, P.J.1
Pazy, Y.2
Conti, B.3
Riddle, D.4
Appella, E.5
-
24
-
-
71749097993
-
T cell allorecognition via molecular mimicry
-
Macdonald WA, Chen Z, Gras S, Archbold JK, Tynan FE, et al. (2009) T cell allorecognition via molecular mimicry. Immunity 31: 897-908.
-
(2009)
Immunity
, vol.31
, pp. 897-908
-
-
Macdonald, W.A.1
Chen, Z.2
Gras, S.3
Archbold, J.K.4
Tynan, F.E.5
-
25
-
-
27544446623
-
T cell receptor recognition of a 'super-bulged' major histocompatibility complex class I-bound peptide
-
Tynan FE, Burrows SR, Buckle AM, Clements CS, Borg NA, et al. (2005) T cell receptor recognition of a 'super-bulged' major histocompatibility complex class I-bound peptide. Nat Immunol 6: 1114-1122.
-
(2005)
Nat Immunol
, vol.6
, pp. 1114-1122
-
-
Tynan, F.E.1
Burrows, S.R.2
Buckle, A.M.3
Clements, C.S.4
Borg, N.A.5
-
26
-
-
20944450033
-
Structural and kinetic basis for heightened immunogenicity of T cell vaccines
-
Chen JL, Stewart-Jones G, Bossi G, Lissin NM, Wooldridge L, et al. (2005) Structural and kinetic basis for heightened immunogenicity of T cell vaccines. J Exp Med 201: 1243-1255.
-
(2005)
J Exp Med
, vol.201
, pp. 1243-1255
-
-
Chen, J.L.1
Stewart-Jones, G.2
Bossi, G.3
Lissin, N.M.4
Wooldridge, L.5
-
27
-
-
34247154800
-
A T cell receptor flattens a bulged antigenic peptide presented by a major histocompatibility complex class I molecule
-
Tynan FE, Reid HH, Kjer-Nielsen L, Miles JJ, Wilce MC, et al. (2007) A T cell receptor flattens a bulged antigenic peptide presented by a major histocompatibility complex class I molecule. Nat Immunol 8: 268-276.
-
(2007)
Nat Immunol
, vol.8
, pp. 268-276
-
-
Tynan, F.E.1
Reid, H.H.2
Kjer-Nielsen, L.3
Miles, J.J.4
Wilce, M.C.5
-
28
-
-
34247346627
-
How much can a T-cell antigen receptor adapt to structurally distinct antigenic peptides?
-
Mazza C, Auphan-Anezin N, Gregoire C, Guimezanes A, Kellenberger C, et al. (2007) How much can a T-cell antigen receptor adapt to structurally distinct antigenic peptides? EMBO J 26: 1972-1983.
-
(2007)
EMBO J
, vol.26
, pp. 1972-1983
-
-
Mazza, C.1
Auphan-Anezin, N.2
Gregoire, C.3
Guimezanes, A.4
Kellenberger, C.5
-
29
-
-
77951817966
-
The diabetogenic mouse MHC class II molecule I-Ag7 is endowed with a switch that modulates TCR affinity
-
Yoshida K, Corper AL, Herro R, Jabri B, Wilson IA, et al. (2010) The diabetogenic mouse MHC class II molecule I-Ag7 is endowed with a switch that modulates TCR affinity. J Clin Invest 120: 1578-1590.
-
(2010)
J Clin Invest
, vol.120
, pp. 1578-1590
-
-
Yoshida, K.1
Corper, A.L.2
Herro, R.3
Jabri, B.4
Wilson, I.A.5
-
30
-
-
0033046472
-
Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses
-
Yewdell JW, Bennink JR, (1999) Immunodominance in major histocompatibility complex class I-restricted T lymphocyte responses. Annu Rev Immunol 17: 51-88.
-
(1999)
Annu Rev Immunol
, vol.17
, pp. 51-88
-
-
Yewdell, J.W.1
Bennink, J.R.2
-
31
-
-
32544458887
-
T cell receptor/peptide/MHC molecular characterization and standardized pMHC contact sites in IMGT/3Dstructure-DB
-
Kaas Q, Lefranc MP, (2005) T cell receptor/peptide/MHC molecular characterization and standardized pMHC contact sites in IMGT/3Dstructure-DB. In Silico Biol 5: 505-528.
-
(2005)
In Silico Biol
, vol.5
, pp. 505-528
-
-
Kaas, Q.1
Lefranc, M.P.2
-
32
-
-
46049113012
-
IMGT standardization for molecular characterization of the T cell receptor/peptide/MHC complexes
-
In: Schoenbach C, Ranganathan S, Brusic V, editors, New York, Springer
-
Kaas Q, Duprat E, Tourneur G, Lefranc MP, (2008) IMGT standardization for molecular characterization of the T cell receptor/peptide/MHC complexes. In: Schoenbach C, Ranganathan S, Brusic V, editors. Immunoinformatics, Immunomics Reviews Series New York Springer pp. 19-49.
-
(2008)
Immunoinformatics, Immunomics Reviews Series
, pp. 19-49
-
-
Kaas, Q.1
Duprat, E.2
Tourneur, G.3
Lefranc, M.P.4
-
33
-
-
18344394144
-
A T cell receptor CDR3beta loop undergoes conformational changes of unprecedented magnitude upon binding to a peptide/MHC class I complex
-
Reiser JB, Gregoire C, Darnault C, Mosser T, Guimezanes A, et al. (2002) A T cell receptor CDR3beta loop undergoes conformational changes of unprecedented magnitude upon binding to a peptide/MHC class I complex. Immunity 16: 345-354.
-
(2002)
Immunity
, vol.16
, pp. 345-354
-
-
Reiser, J.B.1
Gregoire, C.2
Darnault, C.3
Mosser, T.4
Guimezanes, A.5
-
34
-
-
0030935007
-
The MHC reactivity of the T cell repertoire prior to positive and negative selection
-
Zerrahn J, Held W, Raulet DH, (1997) The MHC reactivity of the T cell repertoire prior to positive and negative selection. Cell 88: 627-636.
-
(1997)
Cell
, vol.88
, pp. 627-636
-
-
Zerrahn, J.1
Held, W.2
Raulet, D.H.3
-
35
-
-
0037212339
-
IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains
-
Lefranc MP, Pommie C, Ruiz M, Giudicelli V, Foulquier E, et al. (2003) IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains. Dev Comp Immunol 27: 55-77.
-
(2003)
Dev Comp Immunol
, vol.27
, pp. 55-77
-
-
Lefranc, M.P.1
Pommie, C.2
Ruiz, M.3
Giudicelli, V.4
Foulquier, E.5
-
36
-
-
0033520962
-
The crystal structure of a T cell receptor in complex with peptide and MHC class II
-
Reinherz EL, Tan K, Tang L, Kern P, Liu J, et al. (1999) The crystal structure of a T cell receptor in complex with peptide and MHC class II. Science 286: 1913-1921.
-
(1999)
Science
, vol.286
, pp. 1913-1921
-
-
Reinherz, E.L.1
Tan, K.2
Tang, L.3
Kern, P.4
Liu, J.5
-
37
-
-
18344405559
-
Two human T cell receptors bind in a similar diagonal mode to the HLA-A2/Tax peptide complex using different TCR amino acids
-
Ding YH, Smith KJ, Garboczi DN, Utz U, Biddison WE, et al. (1998) Two human T cell receptors bind in a similar diagonal mode to the HLA-A2/Tax peptide complex using different TCR amino acids. Immunity 8: 403-411.
-
(1998)
Immunity
, vol.8
, pp. 403-411
-
-
Ding, Y.H.1
Smith, K.J.2
Garboczi, D.N.3
Utz, U.4
Biddison, W.E.5
-
38
-
-
0032549142
-
Structural basis of plasticity in T cell receptor recognition of a self peptide-MHC antigen
-
Garcia KC, Degano M, Pease LR, Huang M, Peterson PA, et al. (1998) Structural basis of plasticity in T cell receptor recognition of a self peptide-MHC antigen. Science 279: 1166-1172.
-
(1998)
Science
, vol.279
, pp. 1166-1172
-
-
Garcia, K.C.1
Degano, M.2
Pease, L.R.3
Huang, M.4
Peterson, P.A.5
-
39
-
-
0033520991
-
Perspectives: protein structure. Class-conscious TCR?
-
Wilson IA, (1999) Perspectives: protein structure. Class-conscious TCR? Science 286: 1867-1868.
-
(1999)
Science
, vol.286
, pp. 1867-1868
-
-
Wilson, I.A.1
-
40
-
-
0037240790
-
A structural basis for the selection of dominant alphabeta T cell receptors in antiviral immunity
-
Kjer-Nielsen L, Clements CS, Purcell AW, Brooks AG, Whisstock JC, et al. (2003) A structural basis for the selection of dominant alphabeta T cell receptors in antiviral immunity. Immunity 18: 53-64.
-
(2003)
Immunity
, vol.18
, pp. 53-64
-
-
Kjer-Nielsen, L.1
Clements, C.S.2
Purcell, A.W.3
Brooks, A.G.4
Whisstock, J.C.5
-
41
-
-
0037018102
-
Structure of a complex of the human alpha/beta T cell receptor (TCR) HA1.7, influenza hemagglutinin peptide, and major histocompatibility complex class II molecule, HLA-DR4 (DRA*0101 and DRB1*0401): insight into TCR cross-restriction and alloreactivity
-
Hennecke J, Wiley DC, (2002) Structure of a complex of the human alpha/beta T cell receptor (TCR) HA1.7, influenza hemagglutinin peptide, and major histocompatibility complex class II molecule, HLA-DR4 (DRA*0101 and DRB1*0401): insight into TCR cross-restriction and alloreactivity. J Exp Med 195: 571-581.
-
(2002)
J Exp Med
, vol.195
, pp. 571-581
-
-
Hennecke, J.1
Wiley, D.C.2
-
42
-
-
12344322695
-
High-affinity, peptide-specific T cell receptors can be generated by mutations in CDR1, CDR2 or CDR3
-
Chlewicki LK, Holler PD, Monti BC, Clutter MR, Kranz DM, (2005) High-affinity, peptide-specific T cell receptors can be generated by mutations in CDR1, CDR2 or CDR3. J Mol Biol 346: 223-239.
-
(2005)
J Mol Biol
, vol.346
, pp. 223-239
-
-
Chlewicki, L.K.1
Holler, P.D.2
Monti, B.C.3
Clutter, M.R.4
Kranz, D.M.5
-
43
-
-
0031547966
-
Electrostatic complementarity at protein/protein interfaces
-
McCoy AJ, Chandana Epa V, Colman PM, (1997) Electrostatic complementarity at protein/protein interfaces. J Mol Biol 268: 570-584.
-
(1997)
J Mol Biol
, vol.268
, pp. 570-584
-
-
McCoy, A.J.1
Chandana Epa, V.2
Colman, P.M.3
-
44
-
-
18244392426
-
Unconventional topology of self peptide-major histocompatibility complex binding by a human autoimmune T cell receptor
-
Hahn M, Nicholson MJ, Pyrdol J, Wucherpfennig KW, (2005) Unconventional topology of self peptide-major histocompatibility complex binding by a human autoimmune T cell receptor. Nat Immunol 6: 490-496.
-
(2005)
Nat Immunol
, vol.6
, pp. 490-496
-
-
Hahn, M.1
Nicholson, M.J.2
Pyrdol, J.3
Wucherpfennig, K.W.4
-
45
-
-
65249176824
-
Rational development of high-affinity T-cell receptor-like antibodies
-
Stewart-Jones G, Wadle A, Hombach A, Shenderov E, Held G, et al. (2009) Rational development of high-affinity T-cell receptor-like antibodies. Proc Natl Acad Sci U S A 106: 5784-5788.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 5784-5788
-
-
Stewart-Jones, G.1
Wadle, A.2
Hombach, A.3
Shenderov, E.4
Held, G.5
-
46
-
-
0142219443
-
A correlation between TCR Valpha docking on MHC and CD8 dependence: implications for T cell selection
-
Buslepp J, Wang H, Biddison WE, Appella E, Collins EJ, (2003) A correlation between TCR Valpha docking on MHC and CD8 dependence: implications for T cell selection. Immunity 19: 595-606.
-
(2003)
Immunity
, vol.19
, pp. 595-606
-
-
Buslepp, J.1
Wang, H.2
Biddison, W.E.3
Appella, E.4
Collins, E.J.5
-
47
-
-
48449097801
-
webPIPSA: a web server for the comparison of protein interaction properties
-
Richter S, Wenzel A, Stein M, Gabdoulline RR, Wade RC, (2008) webPIPSA: a web server for the comparison of protein interaction properties. Nucleic Acids Res 36: W276-280.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Richter, S.1
Wenzel, A.2
Stein, M.3
Gabdoulline, R.R.4
Wade, R.C.5
-
48
-
-
0031574072
-
The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG, (1997) The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
49
-
-
0030305457
-
R: A language for data analysis and graphics
-
Ihaka R, Gentleman R, (1996) R: A language for data analysis and graphics. J Comput and Graph Stat 5: 299-314.
-
(1996)
J Comput and Graph Stat
, vol.5
, pp. 299-314
-
-
Ihaka, R.1
Gentleman, R.2
-
50
-
-
33645498495
-
Directed evolution of human T cell receptor CDR2 residues by phage display dramatically enhances affinity for cognate peptide-MHC without increasing apparent cross-reactivity
-
Dunn SM, Rizkallah PJ, Baston E, Mahon T, Cameron B, et al. (2006) Directed evolution of human T cell receptor CDR2 residues by phage display dramatically enhances affinity for cognate peptide-MHC without increasing apparent cross-reactivity. Protein Sci 15: 710-721.
-
(2006)
Protein Sci
, vol.15
, pp. 710-721
-
-
Dunn, S.M.1
Rizkallah, P.J.2
Baston, E.3
Mahon, T.4
Cameron, B.5
-
51
-
-
38949100462
-
The structural dynamics and energetics of an immunodominant T cell receptor are programmed by its Vbeta domain
-
Ishizuka J, Stewart-Jones GB, van der Merwe A, Bell JI, McMichael AJ, et al. (2008) The structural dynamics and energetics of an immunodominant T cell receptor are programmed by its Vbeta domain. Immunity 28: 171-182.
-
(2008)
Immunity
, vol.28
, pp. 171-182
-
-
Ishizuka, J.1
Stewart-Jones, G.B.2
van der Merwe, A.3
Bell, J.I.4
McMichael, A.J.5
-
52
-
-
60549093248
-
Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition
-
Archbold JK, Macdonald WA, Gras S, Ely LK, Miles JJ, et al. (2009) Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition. J Exp Med 206: 209-219.
-
(2009)
J Exp Med
, vol.206
, pp. 209-219
-
-
Archbold, J.K.1
Macdonald, W.A.2
Gras, S.3
Ely, L.K.4
Miles, J.J.5
-
53
-
-
0035937526
-
Glycosylation and the immune system
-
Rudd PM, Elliott T, Cresswell P, Wilson IA, Dwek RA, (2001) Glycosylation and the immune system. Science 291: 2370-2376.
-
(2001)
Science
, vol.291
, pp. 2370-2376
-
-
Rudd, P.M.1
Elliott, T.2
Cresswell, P.3
Wilson, I.A.4
Dwek, R.A.5
-
54
-
-
33846977011
-
Crystal structure of a complete ternary complex of TCR, superantigen and peptide-MHC
-
Wang L, Zhao Y, Li Z, Guo Y, Jones LL, et al. (2007) Crystal structure of a complete ternary complex of TCR, superantigen and peptide-MHC. Nat Struct Mol Biol 14: 169-171.
-
(2007)
Nat Struct Mol Biol
, vol.14
, pp. 169-171
-
-
Wang, L.1
Zhao, Y.2
Li, Z.3
Guo, Y.4
Jones, L.L.5
-
55
-
-
10644239910
-
T cell cross-reactivity and conformational changes during TCR engagement
-
Lee JK, Stewart-Jones G, Dong T, Harlos K, Di Gleria K, et al. (2004) T cell cross-reactivity and conformational changes during TCR engagement. J Exp Med 200: 1455-1466.
-
(2004)
J Exp Med
, vol.200
, pp. 1455-1466
-
-
Lee, J.K.1
Stewart-Jones, G.2
Dong, T.3
Harlos, K.4
Di Gleria, K.5
-
56
-
-
54049111388
-
Conformational changes and flexibility in T-cell receptor recognition of peptide-MHC complexes
-
Armstrong KM, Piepenbrink KH, Baker BM, (2008) Conformational changes and flexibility in T-cell receptor recognition of peptide-MHC complexes. Biochem J 415: 183-196.
-
(2008)
Biochem J
, vol.415
, pp. 183-196
-
-
Armstrong, K.M.1
Piepenbrink, K.H.2
Baker, B.M.3
-
57
-
-
2642524483
-
A physical reference state unifies the structure-derived potential of mean force for protein folding and binding
-
Liu S, Zhang C, Zhou H, Zhou Y, (2004) A physical reference state unifies the structure-derived potential of mean force for protein folding and binding. Proteins 56: 93-101.
-
(2004)
Proteins
, vol.56
, pp. 93-101
-
-
Liu, S.1
Zhang, C.2
Zhou, H.3
Zhou, Y.4
-
58
-
-
0036838311
-
Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction
-
Zhou H, Zhou Y, (2002) Distance-scaled, finite ideal-gas reference state improves structure-derived potentials of mean force for structure selection and stability prediction. Protein Sci 11: 2714-2726.
-
(2002)
Protein Sci
, vol.11
, pp. 2714-2726
-
-
Zhou, H.1
Zhou, Y.2
-
59
-
-
84986522918
-
ICM: A new method for protein modeling and design: applications to docking and structure prediction from the distorted native conformation
-
Abagyan RA, Totrov MM, Kuznetsov DA, (1994) ICM: A new method for protein modeling and design: applications to docking and structure prediction from the distorted native conformation. J Comp Chem 15: 488-506.
-
(1994)
J Comp Chem
, vol.15
, pp. 488-506
-
-
Abagyan, R.A.1
Totrov, M.M.2
Kuznetsov, D.A.3
-
60
-
-
0027955787
-
Biased probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins
-
Abagyan RA, Totrov MM, (1994) Biased probability Monte Carlo conformational searches and electrostatic calculations for peptides and proteins. J Mol Biol 235: 983-1002.
-
(1994)
J Mol Biol
, vol.235
, pp. 983-1002
-
-
Abagyan, R.A.1
Totrov, M.M.2
|