JPEG2000 for automated quantification of immunohistochemically stained cell nuclei: A comparative study with standard JPEG format

Virchows Archiv

Volumn 458, Issue 2, 2011, Pages 237-245

  Lejeune, Marylène ^a   López, Carlos ^a   Bosch, Ramón ^a   Korzyńska, Anna ^b   Salvadó, Maria Teresa ^a   García Rojo, Marcial ^c   Neuman, Urszula ^b   Witkowski, Łukasz ^b   Baucells, Jordi ^a   Jaén, Joaquín ^a  

^a HOSPITAL VERGE DE LA CINTA   (Spain)

^b INSTITUTE OF BIOCYBERNETICS AND BIOMEDICAL ENGINEERING   (Poland)

^c HOSPITAL GENERAL UNIVERSITARIO DE CIUDAD REAL   (Spain)

Author keywords

Automated image analysis; immunohistochemistry; JPEG; JPEG2000

Indexed keywords

KI 67 ANTIGEN; TRANSCRIPTION FACTOR FOXP3;

ARTICLE; CELL COUNT; CELL NUCLEUS; DIGITAL IMAGING; IMAGE ANALYSIS; IMAGE QUALITY; IMMUNOHISTOCHEMISTRY; INTERMETHOD COMPARISON; JOINT PHOTOGRAPHIC EXPERTS GROUP 2000 FORMAT; JOINT PHOTOGRAPHIC EXPERTS GROUP FORMAT; PRIORITY JOURNAL;

AUTOMATION; CELL NUCLEUS; DATA COMPRESSION; HUMANS; IMAGE INTERPRETATION, COMPUTER-ASSISTED; IMMUNOHISTOCHEMISTRY; STAINING AND LABELING;

EID: 79951720335     PISSN: 09456317     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00428-010-1008-3     Document Type: Article

References (48)

1. C Cheretis E Angelidou F Dietrich E Politi H Kiaris H Koutselini 2008 Prognostic value of computer-assisted morphological and morphometrical analysis for detecting the recurrence tendency of basal cell carcinoma Med Sci Monit 14 MT13 MT19 18443558
2. DV Makarov C Marlow JI Epstein MC Miller P Landis AW Partin HB Carter RW Veltri 2008 Using nuclear morphometry to predict the need for treatment among men with low grade, low stage prostate cancer enrolled in a program of expectant management with curative intent Prostate 68 183 189 10.1002/pros.20679 18085616 (Pubitemid 351186230)
3. T Alvaro M Lejeune JF Garcia MT Salvado C Lopez R Bosch J Jaen P Escriva LE Pons 2008 Tumor-infiltrated immune response correlates with alterations in the apoptotic and cell cycle pathways in Hodgkin and Reed-Sternberg cells Clin Cancer Res 14 685 691 1:CAS:528:DC%2BD1cXhsFyktr4%3D 10.1158/1078-0432.CCR-07- 1246 18245527 (Pubitemid 351231148)
4. K Zhang JW Prichard S Yoder J De F Lin 2007 Utility of SKP2 and MIB-1 in grading follicular lymphoma using quantitative imaging analysis Hum Pathol 38 878 882 1:CAS:528:DC%2BD2sXlsFKgsrw%3D 10.1016/j.humpath.2006.11.021 17350668 (Pubitemid 46726512)
5. AS Joshi GM Sharangpani K Porter S Keyhani C Morrison AS Basu GA Gholap AS Gholap SH Barsky 2007 Semi-automated imaging system to quantitate Her-2/neu membrane receptor immunoreactivity in human breast cancer Cytom A 71 273 285 10.1002/cyto.a.20374 (Pubitemid 46717324)
6. T Alvaro M Lejeune MT Salvado C Lopez J Jaen R Bosch LE Pons 2006 Immunohistochemical patterns of reactive microenvironment are associated with clinicobiologic behavior in follicular lymphoma patients J Clin Oncol 24 5350 5357 10.1200/JCO.2006.06.4766 17135637 (Pubitemid 46623165)
7. T Markiewicz S Osowski J Patera W Kozlowski 2006 Image processing for accurate cell recognition and count on histologic slides Anal Quant Cytol Histol 28 281 291 17067010 (Pubitemid 44622504)
8. A Johnsson C Olsson H Anderson E Cavallin-Stahl 1994 Evaluation of a method for quantitative immunohistochemical analysis of cisplatin-DNA adducts in tissues from nude mice Cytometry 17 142 150 1:CAS:528:DyaK2cXmvFWrtbY%3D 10.1002/cyto.990170206 7835164 (Pubitemid 24312494)
9. DE Mosedale JC Metcalfe DJ Grainger 1996 Optimization of immunofluorescence methods by quantitative image analysis J Histochem Cytochem 44 1043 1050 1:CAS:528:DyaK28XlsVOisb4%3D 8773570 (Pubitemid 26293376)
10. AC Johansson E Visse B Widegren HO Sjogren P Siesjo 2001 Computerized image analysis as a tool to quantify infiltrating leukocytes: a comparison between high- and low-magnification images J Histochem Cytochem 49 1073 1079 1:CAS:528:DC%2BD3MXmsFylt7k%3D 11511677 (Pubitemid 32800529)
11. M Lejeune J Jaen L Pons C Lopez MT Salvado R Bosch M Garcia P Escriva J Baucells X Cugat T Alvaro 2008 Quantification of diverse subcellular immunohistochemical markers with clinicobiological relevancies: validation of a new computer-assisted image analysis procedure J Anat 212 868 878 10.1111/j.1469-7580.2008.00910.x 18510512 (Pubitemid 351772667)
12. C Lopez M Lejeune MT Salvado P Escriva R Bosch LE Pons T Alvaro J Roig X Cugat J Baucells J Jaen 2008 Automated quantification of nuclear immunohistochemical markers with different complexity Histochem Cell Biol 129 379 387 1:CAS:528:DC%2BD1cXitlKqsLs%3D 10.1007/s00418-007-0368-5 18172664
13. YH Shiao TJ Chen KS Chuang CH Lin CC Chuang 2007 Quality of compressed medical images J Digit Imaging 20 149 159 10.1007/s10278-007-9013-z 17318703 (Pubitemid 46789157)
14. VJ Tuominen J Isola 2007 The application of JPEG2000 in virtual microscopy J Digit Imaging 22 250 258 10.1007/s10278-007-9090-z 17999112
15. M Penedo MJ Lado PG Tahoces M Souto JJ Vidal 2006 Effects of JPEG2000 data compression on an automated system for detecting clustered microcalcifications in digital mammograms IEEE Trans Inf Technol Biomed 10 354 361 10.1109/TITB.2005.864381 16617624
16. ML Belair AK Fansi D Descovich AR Leblanc P Harasymowycz 2005 The effect of compression on clinical diagnosis of glaucoma based on non-analyzed confocal scanning laser ophthalmoscopy images Ophthalmic Surg Lasers Imaging 36 323 326 16156150 (Pubitemid 41073110)
17. Y Ohgiya T Gokan H Nobusawa M Hirose N Seino H Fujisawa M Baba K Nagai K Tanno N Takeyama H Munechika 2003 Acute cerebral infarction: effect of JPEG compression on detection at CT Radiology 227 124 127 10.1148/radiol.2271020067 12601191 (Pubitemid 36384189)
18. EF CM S Winkler 2004 JPEG vs. JPEG2000: an objective comparison of image encoding quality Proc SPIE Appl Digit Image Proc 5558 300 308 (Pubitemid 40371366)
19. BJ Erickson 2002 Irreversible compression of medical images J Digit Imaging 15 5 14 10.1007/s10278-002-0001-z 12134209 (Pubitemid 41448809)
20. A Janhom PF van der Stelt GC Sanderink 2002 A comparison of two compression algorithms and the detection of caries Dentomaxillofac Radiol 31 257 263 1:STN:280:DC%2BD38zksVWktQ%3D%3D 10.1038/sj.dmfr.4600704 12087443 (Pubitemid 38988366)
21. RM Slone DH Foos BR Whiting E Muka DA Rubin TK Pilgram KS Kohm SS Young P Ho DD Hendrickson 2000 Assessment of visually lossless irreversible image compression: comparison of three methods by using an image-comparison workstation Radiology 215 543 553 1:STN:280:DC%2BD3c3lslSjtg%3D%3D 10796938 (Pubitemid 30237858)
22. KA Matkowskyj R Cox RT Jensen RV Benya 2003 Quantitative immunohistochemistry by measuring cumulative signal strength accurately measures receptor number J Histochem Cytochem 51 205 214 1:CAS:528: DC%2BD3sXptVKitQ%3D%3D 12533529 (Pubitemid 36160047)
23. GM Sharangpani AS Joshi K Porter AS Deshpande S Keyhani GA Naik AS Gholap SH Barsky 2007 Semi-automated imaging system to quantitate estrogen and progesterone receptor immunoreactivity in human breast cancer J Microsc 226 244 255 1:STN:280:DC%2BD2szitlaqug%3D%3D 10.1111/j.1365-2818.2007.01772.x 17535263 (Pubitemid 47024246)
24. C Lopez M Lejeune P Escria R Bosch MT Salvadoacute LE Pons J Baucells X Cugat T Alvaro J Jaen 2008 Effects of image compression on automatic count of immunohistochemically stained nuclei in digital images J Am Med Inform Assoc 15 794 798 10.1197/jamia.M2747 18755997
25. T Alvaro-Naranjo M Lejeune MT Salvado-Usach R Bosch-Princep G Reverter-Branchat J Jaen-Martinez LE Pons-Ferre 2005 Tumor-infiltrating cells as a prognostic factor in Hodgkin's lymphoma: a quantitative tissue microarray study in a large retrospective cohort of 267 patients Leuk Lymphoma 46 1581 1591 10.1080/10428190500220654 16236613 (Pubitemid 41700991)
26. RJ Bryant PM Banks DP O'Malley 2006 Ki67 staining pattern as a diagnostic tool in the evaluation of lymphoproliferative disorders Histopathology 48 505 515 1:STN:280:DC%2BD283hslCltA%3D%3D 10.1111/j.1365-2559.2006.02378.x 16623776
27. R Yerushalmi R Woods PM Ravdin MM Hayes KA Gelmon 2010 Ki67 in breast cancer: prognostic and predictive potential Lancet Oncol 11 174 183 1:CAS:528:DC%2BC3cXhtlGgtbc%3D 10.1016/S1470-2045(09)70262-1 20152769
28. L Montebugnoli G Badiali C Marchetti F Cervellati A Farnedi MP Foschini 2009 Prognostic value of Ki67 from clinically and histologically 'normal' distant mucosa in patients surgically treated for oral squamous cell carcinoma: a prospective study Int J Oral Maxillofac Surg 38 1165 1172 1:STN:280: DC%2BD1MjhtV2lsA%3D%3D 10.1016/j.ijom.2009.06.011 19615859
29. SM Ooi JB Vivian RJ Cohen 2009 The use of the Ki-67 marker in the pathological diagnosis of the epithelioid variant of renal angiomyolipoma Int Urol Nephrol 41 559 565 1:CAS:528:DC%2BD1MXns1CgurY%3D 10.1007/s11255-008-9473-1 18839327
30. DL Aslan HE Gulbahce SE Pambuccian JC Manivel J Jessurun 2005 Ki-67 immunoreactivity in the differential diagnosis of pulmonary neuroendocrine neoplasms in specimens with extensive crush artifact Am J Clin Pathol 123 874 878 1:CAS:528:DC%2BD2MXlsFSks74%3D 10.1309/QYV05VGEGKUL2RTT 15899778 (Pubitemid 40740685)
31. N Rioux-Leclercq E Leray JJ Patard B Lobel F Guille F Jouan P Bellaud JI Epstein 2005 The utility of Ki-67 expression in the differential diagnosis of prostatic intraepithelial neoplasia and ductal adenocarcinoma Hum Pathol 36 531 535 1:CAS:528:DC%2BD2MXltVKjtrc%3D 10.1016/j.humpath.2005.01.021 15948120 (Pubitemid 40776006)
32. J Carreras A Lopez-Guillermo BC Fox L Colomo A Martinez G Roncador E Montserrat E Campo AH Banham 2006 High numbers of tumor-infiltrating FOXP3-positive regulatory T cells are associated with improved overall survival in follicular lymphoma Blood 108 2957 2964 1:CAS:528:DC%2BD28XhtFygtrvK 10.1182/blood-2006-04-018218 16825494
33. AM Glas L Knoops L Delahaye MJ Kersten RE Kibbelaar LA Wessels R van Laar JH van Krieken JW Baars J Raemaekers PM Kluin LJ van't Veer D de Jong 2007 Gene-expression and immunohistochemical study of specific T-cell subsets and accessory cell types in the transformation and prognosis of follicular lymphoma J Clin Oncol 25 390 398 1:CAS:528:DC%2BD2sXisFykurw%3D 10.1200/JCO.2006.06.1648 17200149 (Pubitemid 350002987)
34. AM Lee AJ Clear M Calaminici AJ Davies S Jordan F MacDougall J Matthews AJ Norton JG Gribben TA Lister LK Goff 2006 Number of CD4+ cells and location of forkhead box protein P3-positive cells in diagnostic follicular lymphoma tissue microarrays correlates with outcome J Clin Oncol 24 5052 5059 1:CAS:528:DC%2BD28Xht1Gnur3N 10.1200/JCO.2006.06.4642 17033038 (Pubitemid 46631409)
35. T Alvaro M Lejeune MT Salvado R Bosch JF Garcia J Jaen AH Banham G Roncador C Montalban MA Piris 2005 Outcome in Hodgkin's lymphoma can be predicted from the presence of accompanying cytotoxic and regulatory T cells Clin Cancer Res 11 1467 1473 10.1158/1078-0432.CCR-04-1869 15746048 (Pubitemid 40315228)
36. TJ Curiel 2007 Tregs and rethinking cancer immunotherapy J Clin Invest 117 1167 1174 1:CAS:528:DC%2BD2sXlt1Omtrg%3D 10.1172/JCI31202 17476346 (Pubitemid 46718401)
37. D de Jong A Koster A Hagenbeek J Raemaekers D Veldhuizen S Heisterkamp JP de Boer M van Glabbeke 2009 Impact of the tumor microenvironment on prognosis in follicular lymphoma is dependent on specific treatment protocols Haematologica 94 70 77 10.3324/haematol.13574 19059937
38. R Brennecke U Burgel G Rippin F Post HJ Rupprecht J Meyer 2001 Comparison of image compression viability for lossy and lossless JPEG and wavelet data reduction in coronary angiography Int J Cardiovasc Imaging 17 1 12 1:STN:280:DC%2BD3MvkvFGlsg%3D%3D 10.1023/A:1010644318298 11495503
39. RH Eikelboom K Yogesan CJ Barry IJ Constable ML Tay-Kearney L Jitskaia PH House 2000 Methods and limits of digital image compression of retinal images for telemedicine Investig Ophthalmol Vis Sci 41 1916 1924 1:STN:280: DC%2BD3czgt1ansg%3D%3D (Pubitemid 30354368)
40. OBR Hui 2002 Medical image compression using JPEG2000 and JPEG: a comparison study J Mech Med Biol 2 313 328 10.1142/S021951940200054X
41. TA Iyriboz MJ Zukoski KD Hopper PL Stagg 1999 A comparison of wavelet and joint photographic experts group lossy compression methods applied to medical images J Digit Imaging 12 14 17 1:STN:280:DyaK1M3ntlOjsA%3D%3D 10.1007/BF03168745 10342156
42. J Ricke P Maass E Lopez Hanninen T Liebig H Amthauer C Stroszczynski W Schauer T Boskamp M Wolf 1998 Wavelet versus JPEG (Joint Photographic Expert Group) and fractal compression. Impact on the detection of low-contrast details in computed radiographs Investig Radiol 33 456 463 1:STN:280: DyaK1czmvF2jug%3D%3D 10.1097/00004424-199808000-00006 (Pubitemid 30253675)
43. F Li S Sone S Takashima K Kiyono ZG Yang M Hasegawa S Kawakami A Saito K Hanamura K Asakura 2001 Effects of JPEG and wavelet compression of spiral low-dose CT images on detection of small lung cancers Acta Radiol 42 156 160 1:STN:280:DC%2BD3M7mvVGlsw%3D%3D 10.1080/028418501127346657 11259942 (Pubitemid 33655039)
44. A Kalyanpur VP Neklesa CR Taylor AR Daftary JA Brink 2000 Evaluation of JPEG and wavelet compression of body CT images for direct digital teleradiologic transmission Radiology 217 772 779 1:STN:280:DC%2BD3M%2FotVOntA%3D%3D 11110942
45. KM Siddiqui JP Johnson BI Reiner S EL 2005 Discrete cosine transform JPEG compression vs. 2D JPEG2000 compression: JNDmetrix visual discrimination model image quality analysis Proc. SPIE 5748 202 207 10.1117/12.596146 (Pubitemid 41146438)
46. KA Matkowskyj D Schonfeld RV Benya 2000 Quantitative immunohistochemistry by measuring cumulative signal strength using commercially available software Photoshop and MATLAB J Histochem Cytochem 48 303 312 1:CAS:528: DC%2BD3cXhsVGnu7w%3D 10639497
47. SS Singh D Kim JL Mohler 2005 Java Web start based software for automated quantitative nuclear analysis of prostate cancer and benign prostate hyperplasia Biomed Eng Online 4 31 10.1186/1475-925X-4-31 15888205 (Pubitemid 41613896)
48. K Atalag M Sincan B Celasun E Karaagaoglu 2004 Effects of lossy image compression on quantitative image analysis of cell nuclei Anal Quant Cytol Histol 26 22 27 15032077 (Pubitemid 38252631)