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Volumn 52, Issue 2, 2011, Pages 448-467

AtPolλ, a homolog of mammalian DNA polymerase λ in arabidopsis thaliana, is involved in the repair of UV-B induced DNA damage through the dark repair pathway

Author keywords

AtPol ; DNA damage; DNA polymerase; Nucleotide excision repair; UV B

Indexed keywords

ARABIDOPSIS PROTEIN; DNA DIRECTED DNA POLYMERASE; PLANT DNA; PLANT RNA;

EID: 79951566254     PISSN: 00320781     EISSN: 14719053     Source Type: Journal    
DOI: 10.1093/pcp/pcr002     Document Type: Article
Times cited : (45)

References (48)
  • 2
    • 0034649566 scopus 로고    scopus 로고
    • Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • Arabidopsis Genome Initiative
    • Arabidopsis Genome Initiative. (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
    • (2000) Nature , vol.408 , pp. 796-815
  • 3
    • 0242605710 scopus 로고    scopus 로고
    • Nucleotide excision repair of DNA with recombinant human proteins: Definition of the minimal set of factors, active forms of TFIIH, and modulation by CAK
    • Araujo, S.J., Tirode, F., Coin, F., Pospiech, H., Syvaoja, J.E., Stucki, M. et al. (2000) Nucleotide excision repair of DNA with recombinant human proteins: definition of the minimal set of factors, active forms of TFIIH, and modulation by CAK. Genes Dev. 14: 349-359. (Pubitemid 30106489)
    • (2000) Genes and Development , vol.14 , Issue.3 , pp. 349-359
    • Araujo, S.J.1    Tirode, F.2    Coin, F.3    Pospiech, H.4    Syvaoja, J.E.5    Stucki, M.6    Hubscher, U.7    Egly, J.-M.8    Wood, R.D.9
  • 4
    • 75149174575 scopus 로고    scopus 로고
    • DNA polymerase beta-dependent long patch base excision repair in living cells
    • Asagoshi, K., Liu, Y., Masaoka, A, Lan, L, Prasad, R., Horton, J.K. et al. (2010) DNA polymerase beta-dependent long patch base excision repair in living cells. DNA Repair 4: 109-119.
    • (2010) DNA Repair , vol.4 , pp. 109-119
    • Asagoshi, K.1    Liu, Y.2    Masaoka, A.3    Lan, L.4    Prasad, R.5    Horton, J.K.6
  • 5
    • 0031769635 scopus 로고    scopus 로고
    • α-crystallin does not require temperature activation for its chaperone-like activity
    • Bhattacharya, J. and Das, K.P. (1998) a-Crystallin does not require temperature activation for its function as molecular chaperone. Biochem. Mol. Biol. Int. 48: 249-258. (Pubitemid 28499377)
    • (1998) Biochemistry and Molecular Biology International , vol.46 , Issue.2 , pp. 249-258
    • Bhattacharyya, J.1    Das, K.P.2
  • 6
    • 0001171384 scopus 로고    scopus 로고
    • Ultraviolet radiation as a stress factor and the role of protective pigments
    • Edited by Lumsden, P.J. Cambridge University Press, Cambridge
    • Bornman, J.F., Reuber, S., Cen, Y.P. and Weissenbo, G. (1997) Ultraviolet radiation as a stress factor and the role of protective pigments. In Plants and UVB: Responses to Environmental Change. Edited by Lumsden, P.J. pp. 157-168. Cambridge University Press, Cambridge.
    • (1997) Plants and UVB: Responses to Environmental Change , pp. 157-168
    • Bornman, J.F.1    Reuber, S.2    Cen, Y.P.3    Weissenbo, G.4
  • 7
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M.M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72: 248-254.
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 9
    • 0027427334 scopus 로고
    • A UV-sensitive mutant of Arabidopsis defective in the repair of pyrimidine-pyrimidinone(6-4) dimers
    • Britt, A.B., Chen, J.J., Wykoff, D. and Mitchell, D. (1993) A UV sensitive mutant of Arabulopsis defective in the repair of pyrimidine- pyrimidinone (6, 4) dimers. Science 261: 1571-1574. (Pubitemid 23319598)
    • (1993) Science , vol.261 , Issue.5128 , pp. 1571-1574
    • Britt, A.B.1    Chen, J.-J.2    Wykoff, D.3    Mitchell, D.4
  • 11
    • 0032996559 scopus 로고    scopus 로고
    • Molecular genetics of DNA repair in higher plants
    • DOI 10.1016/S1360-1385(98)01355-7
    • Britt, A.B. (1999) Molecular genetics of DNA repair in higher plants. Trends Plant Sci. 4: 20-25. (Pubitemid 29130800)
    • (1999) Trends in Plant Science , vol.4 , Issue.1 , pp. 20-25
    • Britt, A.B.1
  • 12
    • 0005751718 scopus 로고    scopus 로고
    • Repair of damaged bases
    • doi:10.1199/tab.0005
    • Britt, AB. (2002) Repair of damaged bases. In The Arabidopsis Book. doi:10.1199/tab.0005.
    • (2002) The Arabidopsis Book
    • Britt, A.B.1
  • 13
    • 0031686246 scopus 로고    scopus 로고
    • Eukaryotic DNA polymerases in DNA replication and DNA repair
    • DOI 10.1007/s004120050300
    • Burgers, P.M.J. (1998) Eukaryotic DNA polymerases in DNA replication and DNA repair. Chromosoma 107: 218-227. (Pubitemid 28466460)
    • (1998) Chromosoma , vol.107 , Issue.4 , pp. 218-227
    • Burgers, P.M.J.1
  • 14
    • 0035860767 scopus 로고    scopus 로고
    • Identification of an intrinsic 5'-deoxyribose-5-phosphate lyase activity in human DNA polymerase lambda: A possible role in base excision repair
    • Garcia-Diaz, M., Bebenek, K., Kunkel, T.A and Blanco, L (2001) Identification of an intrinsic 5'-deoxyribose-5-phosphate lyase activity in human DNA polymerase lambda: a possible role in base excision repair. J. Biol. Chem 276: 34659-34663.
    • (2001) J. Biol. Chem , vol.276 , pp. 34659-34663
    • Garcia-Diaz, M.1    Bebenek, K.2    Kunkel, T.A.3    Blanco, L.4
  • 17
    • 56749157389 scopus 로고    scopus 로고
    • Transcription-coupled DNA repair: Two decades of progress and surprises
    • Hanawalt, P.C and Spivak, G. (2008) Transcription-coupled DNA repair: two decades of progress and surprises. Nat. Rev. Mol. Cell Biol. 9: 958-970.
    • (2008) Nat. Rev. Mol. Cell Biol. , vol.9 , pp. 958-970
    • Hanawalt, P.C.1    Spivak, G.2
  • 18
    • 0003448569 scopus 로고
    • Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
    • Harlow, E. and Lane, D. (1988) In Antibodies: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
    • (1988) Antibodies: A Laboratory Manual
    • Harlow, E.1    Lane, D.2
  • 19
    • 33646851561 scopus 로고    scopus 로고
    • A mutation in the uvi4 gene promotes progression of endo-reduplication and confers increased tolerance towards ultraviolet B light
    • DOI 10.1111/j.1365-313X.2006.02696.x
    • Hase, Y., Trung, K.H., Matsunaga, T. and Tanaka, A. (2006) A mutation in the uvi4 gene promotes progression of endo-reduplication and confers increased tolerance towards ultraviolet B light. Plant J. 46: 317-326. (Pubitemid 43773570)
    • (2006) Plant Journal , vol.46 , Issue.2 , pp. 317-326
    • Hase, Y.1    Trung, K.H.2    Matsunaga, T.3    Tanaka, A.4
  • 21
    • 59349118144 scopus 로고    scopus 로고
    • Rapid repair of DNA double strand breaks in Arabidopsis thaliana is dependent on proteins involved in chromosome structure maintenance
    • Kozak, J., West, C.E., White, C, da Costa-Nunes, J.A and Angelis, K.J. (2009) Rapid repair of DNA double strand breaks in Arabidopsis thaliana is dependent on proteins involved in chromosome structure maintenance. DNA Repair 8: 413-419.
    • (2009) DNA Repair , vol.8 , pp. 413-419
    • Kozak, J.1    West, C.E.2    White, C.3    Da Costa-Nunes, J.A.4    Angelis, K.J.5
  • 22
    • 33646793694 scopus 로고    scopus 로고
    • Reliable Comet assay measurements for detecting DNA damage induced by ionising radiation and chemicals
    • DOI 10.1016/j.mrgentox.2006.03.002, PII S1383571806000519
    • Kumaravel, T.S. and Jha, A.N. (2006) Reliable assay measurements for detecting DNA damage induced by ionising radiation and chemicals. Mutat. Res. 605: 7-16. (Pubitemid 43767337)
    • (2006) Mutation Research - Genetic Toxicology and Environmental Mutagenesis , vol.605 , Issue.1-2 , pp. 7-16
    • Kumaravel, T.S.1    Jha, A.N.2
  • 23
    • 0347683431 scopus 로고    scopus 로고
    • Implication of DNA Polymerase λ in Alignment-based Gap Filling for Nonhomologous DNA End Joining in Human Nuclear Extracts
    • DOI 10.1074/jbc.M307913200
    • Lee, J.W., Blanco, L., Zhou, T., Garcia-Diaz, M., Bebenek, K., Kunkel, T.A. et al. (2004) Implication of DNA polymerase lambda in alignment-based gap filling for nonhomologous DNA end joining in human nuclear extracts. J. Biol. Chem. 279: 805-811. (Pubitemid 38044887)
    • (2004) Journal of Biological Chemistry , vol.279 , Issue.1 , pp. 805-811
    • Lee, J.W.1    Blanco, L.2    Zhou, T.3    Garcia-Diaz, M.4    Bebenek, K.5    Kunkel, T.A.6    Wang, Z.7    Povirk, L.F.8
  • 24
    • 0036007926 scopus 로고    scopus 로고
    • Repair of damaged DNA by arabidopsis cell extract
    • DOI 10.1105/tpc.010258
    • Li, A., Schuermann, D., Gallego, F., Kovalchuk, I. and Tinland, B. (2002) Repair of damaged DNA by Arabidopsis cell extract. Plant Cell 14: 263-273. (Pubitemid 34140410)
    • (2002) Plant Cell , vol.14 , Issue.1 , pp. 263-273
    • Li, A.1    Schuermann, D.2    Gallego, F.3    Kovalchuk, I.4    Tinland, B.5
  • 25
    • 0031419403 scopus 로고    scopus 로고
    • Trichome density and its UV-B protective potential are affected by shading and leaf position on the canopy
    • DOI 10.1016/S0098-8472(97)00005-1, PII S0098847297000051
    • Liakoura, V., Stefanoub, M., Manetasb, Y., Cholevasa, C. and Karabourniotis, G. (1997) Trichome density and its UV-B protective potential are affected by shading and leaf position on the canopy. Environ. Exp. Bot. 38: 223-229. (Pubitemid 28069552)
    • (1997) Environmental and Experimental Botany , vol.38 , Issue.3 , pp. 223-229
    • Liakoura, V.1    Stefanou, M.2    Manetas, Y.3    Cholevas, C.4    Karabourniotis, G.5
  • 27
    • 43149102700 scopus 로고    scopus 로고
    • Versatile protection from mutagenic DNA lesions conferred by bipartite recognition in nucleotide excision repair
    • Maillard, O., Camenisch, U., Blagoev, K.B. and Naegeli, H. (2008) Versatile protection from mutagenic DNA lesions conferred by bipartite recognition in nucleotide excision repair. Mutat. Res. 658: 271-286.
    • (2008) Mutat. Res. , vol.658 , pp. 271-286
    • Maillard, O.1    Camenisch, U.2    Blagoev, K.B.3    Naegeli, H.4
  • 28
    • 34447302016 scopus 로고    scopus 로고
    • Sealing of Chromosomal DNA Nicks during Nucleotide Excision Repair Requires XRCC1 and DNA Ligase IIIα in a Cell-Cycle-Specific Manner
    • DOI 10.1016/j.molcel.2007.06.014, PII S1097276507004042
    • Moser, J., Kool, H., Giakzidis, I., Caldecott, K., Mullenders, L.H. and Fousteri, M.I. (2007) Sealing of chromosomal DNA nicks during nucleotide excision repair requires XRCC1 and DNA ligase III alpha in a cell-cycle-specific manner. Mol. Cell 27: 311-323. (Pubitemid 47058307)
    • (2007) Molecular Cell , vol.27 , Issue.2 , pp. 311-323
    • Moser, J.1    Kool, H.2    Giakzidis, I.3    Caldecott, K.4    Mullenders, L.H.F.5    Fousteri, M.I.6
  • 29
    • 33744789415 scopus 로고    scopus 로고
    • The Y-family DNA polymerase κ (pol κ) functions in mammalian nucleotide-excision repair
    • DOI 10.1038/ncb1417, PII N1417
    • Ogi, T. and Lehmann, A.R. (2006) The Y-family DNA polymerase kappa (pol kappa) functions in mammalian nucleotide-excision repair. Nat. Cell Biol. 8: 640-642. (Pubitemid 43827358)
    • (2006) Nature Cell Biology , vol.8 , Issue.6 , pp. 640-642
    • Ogi, T.1    Lehmann, A.R.2
  • 30
    • 77649242633 scopus 로고    scopus 로고
    • Three DNA polymerases, recruited by different mechanisms, carry out NER repair synthesis in human cells
    • Ogi, T., Limsirichaikul, S., Overmeer, R.M., Volker, M., Takenaka, K., Cloney, R. et al. (2010) Three DNA polymerases, recruited by different mechanisms, carry out NER repair synthesis in human cells. Mol. Cell 37: 714-727.
    • (2010) Mol. Cell , vol.37 , pp. 714-727
    • Ogi, T.1    Limsirichaikul, S.2    Overmeer, R.M.3    Volker, M.4    Takenaka, K.5    Cloney, R.6
  • 31
    • 34250634070 scopus 로고    scopus 로고
    • Immunocytochemical technique for protein localization in sections of plant tissues
    • Paciorek, T., Sauer, M., Balla, J., Wisniewska, J. and Friml, J. (2006) Immunocytochemical technique for protein localization in sections of plant tissues. Nat. Protoc. 1: 104-107.
    • (2006) Nat. Protoc. , vol.1 , pp. 104-107
    • Paciorek, T.1    Sauer, M.2    Balla, J.3    Wisniewska, J.4    Friml, J.5
  • 32
    • 0000366414 scopus 로고
    • UV-B-inducible and temperature-sensitive photoreactivation of cyclobutane pyrimidine dimers in Arabidopsis thaliana
    • Pang, Q. and Hays, J.B. (1991) UV-B inducible and temperature-sensitive photoreactivation of cyclobutane pyrimidine dimers in Arabidopsis thaliana. Plant Physiol. 95: 536-543. (Pubitemid 21913846)
    • (1991) Plant Physiology , vol.95 , Issue.2 , pp. 536-543
    • Pang, Q.1    Hays, J.B.2
  • 33
    • 0028321197 scopus 로고
    • DNA damage levels determine cyclobutyl pyrimidine dimer repair mechanisms in alfalfa seedlings
    • Quaite, F.E., Takayanagi, S., Ruffini, J., Sutherland, J.C. and Sutherland, B.M. (1994) DNA damage levels determine cyclobutyl pyrimidine dimer repair mechanisms in alfalfa seedlings. Plant Cell 6: 1635-1641. (Pubitemid 24986216)
    • (1994) Plant Cell , vol.6 , Issue.11 , pp. 1635-1641
    • Quaite, F.E.1    Takayanagi, S.2    Ruffini, J.3    Sutherland, J.C.4    Sutherland, B.M.5
  • 34
    • 34247138406 scopus 로고    scopus 로고
    • A dideoxynucleotide-sensitive DNA polymerase activity characterized from endoreduplicating cells of mungbean (Vigna radiata L.) during ontogeny of cotyledons
    • DOI 10.1111/j.1742-4658.2007.05744.x
    • Roy, S., Sarkar, S.N., Singh, S.K. and Sengupta, D.N. (2007) A dideoxynucleotide-sensitive DNA polymerase activity characterized from endoreduplicating cells of mungbean (Vigna radiata L) during ontogeny of cotyledons. FEBS J. 274: 2005-2023. (Pubitemid 46588000)
    • (2007) FEBS Journal , vol.274 , Issue.8 , pp. 2005-2023
    • Roy, S.1    Sarkar, S.N.2    Singh, S.K.3    Sengupta, D.N.4
  • 35
    • 67650876218 scopus 로고    scopus 로고
    • An insight into the biological functions of family X-DNA polymerase in DNA replication and repair of plant genome
    • Roy, S., Singh, S.K., Roy Choudhury, S. and Sengupta, D.N. (2009) An insight into the biological functions of family X-DNA polymerase in DNA replication and repair of plant genome. Plant Signal. Behav. 4: 1-4.
    • (2009) Plant Signal. Behav. , vol.4 , pp. 1-4
    • Roy, S.1    Singh, S.K.2    Roy Choudhury, S.3    Sengupta, D.N.4
  • 37
    • 0038305458 scopus 로고    scopus 로고
    • Structure and function of DNA photolyase and cryptochrome blue-light photoreceptors
    • Sancar, A. (2003) Structure and function of DNA photolyase and cryptochrome blue-light photoreceptors. Chem. Rev. 103: 2203-2237.
    • (2003) Chem. Rev. , vol.103 , pp. 2203-2237
    • Sancar, A.1
  • 39
    • 0028966181 scopus 로고
    • DNA polymerase beta conducts the gap-filling step in uracil-initiated base excision repair in a bovine testis nuclear extract
    • Singhal, R.K, Prasad, R. and Wilson, S.H. (1995) DNA polymerase beta conducts the gap-filling step in uracil-initiated base excision repair in a bovine testis nuclear extract.J. Biol. Chem. 270: 949-957.
    • (1995) J. Biol. Chem. , vol.270 , pp. 949-957
    • Singhal, R.K.1    Prasad, R.2    Wilson, S.H.3
  • 40
    • 0030903529 scopus 로고    scopus 로고
    • UV-B component of sunlight causes measurable damage in field-grown maize (Zea mays L.): Developmental and cellular heterogeneity of damage and repair
    • Stapleton, A.E., Thorner, C.S. and Walbot, V. (1997) UV-B component of sunlight causes measurable damage in field-grown maize (Zea mays L); developmental and cellular heterogeneity of damage and repair. Plant Cell Environ. 20: 279-290. (Pubitemid 27134237)
    • (1997) Plant, Cell and Environment , vol.20 , Issue.3 , pp. 279-290
    • Stapleton, A.E.1    Thornber, C.S.2    Walbot, V.3
  • 42
    • 0033486110 scopus 로고    scopus 로고
    • Light and dark in chromatin repair: Repair of UV-induced DNA lesions by photolyases and nucleotide excision repair
    • Thoma, F. (1999) Light and dark in chromatin repair: repair of UV-induced DNA lesions by photolyases and nucleotide excision repair. EMBO J. 18: 6585-6598.
    • (1999) EMBO J. , vol.18 , pp. 6585-6598
    • Thoma, F.1
  • 43
    • 0032997614 scopus 로고    scopus 로고
    • Functional diversity of the DNA photolyase/blue light receptor family
    • DOI 10.1016/S0921-8777(99)00013-0, PII S0921877799000130
    • Todo, T. (1999) Functional diversity of the DNA photolyase/blue light receptor family. Mutat. Res. 434: 89-97. (Pubitemid 29287114)
    • (1999) Mutation Research - DNA Repair , vol.434 , Issue.2 , pp. 89-97
    • Todo, T.1
  • 44
    • 59349103130 scopus 로고    scopus 로고
    • Genotoxic stress in plants: Shedding light on DNA damage, repair and DNA repair helicases
    • Tuteja, N., Ahmad, P., Panda, B. and Tuteja, R. (2009) Genotoxic stress in plants: shedding light on DNA damage, repair and DNA repair helicases. Mutat. Res. 681: 134-149.
    • (2009) Mutat. Res. , vol.681 , pp. 134-149
    • Tuteja, N.1    Ahmad, P.2    Panda, B.3    Tuteja, R.4
  • 45
    • 3042725526 scopus 로고    scopus 로고
    • Plant DNA polymerase λ, a DNA repair enzyme that functions in plant meristematic and meiotic tissues
    • DOI 10.1111/j.1432-1033.2004.04214.x
    • Uchiyama, Y., Kimura, S., Yamamoto, T., Ishibashi, T. and Sakaguchi, K. (2004) Plant DNA polymerase X, a DNA repair enzyme that functions in plant meristematic and meiotic tissues. Eur. J. Biochem. 271: 2799-2807. (Pubitemid 38869981)
    • (2004) European Journal of Biochemistry , vol.271 , Issue.13 , pp. 2799-2807
    • Uchiyama, Y.1    Kimura, S.2    Yamamoto, T.3    Ishibashi, T.4    Sakaguchi, K.5
  • 46
    • 0029088318 scopus 로고
    • Detection and measurement of nucleotide excision repair synthesis by mammalian cell extracts in vitro
    • Wood, R.D., Biggerstaff, M. and Shivji, M.K.K. (1995) Detection and measurement of nucleotide excision repair synthesis by mammalian cell extracts in vitro. Methods Enzymol. 7: 163-175.
    • (1995) Methods Enzymol. , vol.7 , pp. 163-175
    • Wood, R.D.1    Biggerstaff, M.2    Shivji, M.K.K.3
  • 47
    • 0031416756 scopus 로고    scopus 로고
    • Which DNA polymerases are used for DNA-repair in eukaryotes?
    • DOI 10.1093/carcin/18.4.605
    • Wood, R.D. and Shivji, M.K. (1997) Which DNA polymerases are used for DNA-repair in eukaryotes?. Carcinogenesis 18: 605-610. (Pubitemid 28132442)
    • (1997) Carcinogenesis , vol.18 , Issue.4 , pp. 605-610
    • Wood, R.D.1    Shivji, M.K.K.2
  • 48
    • 0003115680 scopus 로고    scopus 로고
    • DNA photolyases
    • Edited by Nickoloff, J.A. and Hoekstra, M.F. Humana Press, Totowa, NJ
    • Yasui, A. and Eker, AP.M. (1998) DNA photolyases. In DNA Damage and Repair, Vol. II. Edited by Nickoloff, J.A. and Hoekstra, M.F. pp. 9-32. Humana Press, Totowa, NJ.
    • (1998) DNA Damage and Repair , vol.2 , pp. 9-32
    • Yasui, A.1    Eker, A.P.M.2


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