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Volumn 12, Issue , 2011, Pages

Meta-analysis of muscle transcriptome data using the MADMuscle database reveals biologically relevant gene patterns

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER INTERFACE; DNA MICROARRAY; DUCHENNE MUSCULAR DYSTROPHY; GENE CLUSTER; GENE EXPRESSION; GENETIC CONSERVATION; GENETIC DATABASE; HEART MUSCLE; INFORMATION PROCESSING; INVERTEBRATE; META ANALYSIS (TOPIC); MUSCLE; SKELETAL MUSCLE; TRANSCRIPTOMICS; VERTEBRATE; ANIMAL; BIOLOGY; CLUSTER ANALYSIS; COMPUTER PROGRAM; GENE EXPRESSION PROFILING; GENETICS; GENOMICS; HUMAN; META ANALYSIS; METABOLISM; METHODOLOGY; MOLECULAR GENETICS;

EID: 79951551658     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-12-113     Document Type: Article
Times cited : (19)

References (87)
  • 2
    • 10544256600 scopus 로고    scopus 로고
    • Expression monitoring by hybridization to high-density oligonucleotide arrays
    • 10.1038/nbt1296-1675, 9634850
    • Lockhart DJ, Dong H, Byrne MC, Follettie MT, Gallo MV, Chee MS, et al. Expression monitoring by hybridization to high-density oligonucleotide arrays. Nat Biotechnol 1996, 14:1675-1680. 10.1038/nbt1296-1675, 9634850.
    • (1996) Nat Biotechnol , vol.14 , pp. 1675-1680
    • Lockhart, D.J.1    Dong, H.2    Byrne, M.C.3    Follettie, M.T.4    Gallo, M.V.5    Chee, M.S.6
  • 3
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • 10.1126/science.270.5235.467, 7569999
    • Schena M, Shalon D, Davis RW, Brown PO. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 1995, 270:467-470. 10.1126/science.270.5235.467, 7569999.
    • (1995) Science , vol.270 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 4
    • 70449589689 scopus 로고    scopus 로고
    • Increasing the number of thyroid lesions classes in microarray analysis improves the relevance of diagnostic markers
    • 10.1371/journal.pone.0007632, 2764086, 19893615
    • Fontaine JF, Mirebeau-Prunier D, Raharijaona M, Franc B, Triau S, Rodien P, et al. Increasing the number of thyroid lesions classes in microarray analysis improves the relevance of diagnostic markers. PLoS One 2009, 4:e7632. 10.1371/journal.pone.0007632, 2764086, 19893615.
    • (2009) PLoS One , vol.4
    • Fontaine, J.F.1    Mirebeau-Prunier, D.2    Raharijaona, M.3    Franc, B.4    Triau, S.5    Rodien, P.6
  • 5
    • 77950299507 scopus 로고    scopus 로고
    • Effect of seawater transfer on CYP1A gene expression in rainbow trout gills
    • 10.1016/j.cbpa.2010.02.002, 20167284
    • Leguen I, Odjo N, Le BY, Luthringer B, Baron D, Monod G, et al. Effect of seawater transfer on CYP1A gene expression in rainbow trout gills. Comp Biochem Physiol A Mol Integr Physiol 2010, 156:211-217. 10.1016/j.cbpa.2010.02.002, 20167284.
    • (2010) Comp Biochem Physiol A Mol Integr Physiol , vol.156 , pp. 211-217
    • Leguen, I.1    Odjo, N.2    Le, B.Y.3    Luthringer, B.4    Baron, D.5    Monod, G.6
  • 6
    • 40849139204 scopus 로고    scopus 로고
    • Expression profiling of candidate genes during ovary-to-testis trans-differentiation in rainbow trout masculinized by androgens
    • 10.1016/j.ygcen.2008.01.016, 18299129
    • Baron D, Houlgatte R, Fostier A, Guiguen Y. Expression profiling of candidate genes during ovary-to-testis trans-differentiation in rainbow trout masculinized by androgens. Gen Comp Endocrinol 2008, 156:369-378. 10.1016/j.ygcen.2008.01.016, 18299129.
    • (2008) Gen Comp Endocrinol , vol.156 , pp. 369-378
    • Baron, D.1    Houlgatte, R.2    Fostier, A.3    Guiguen, Y.4
  • 7
    • 12144288425 scopus 로고    scopus 로고
    • Small lymphocytic lymphoma, marginal zone B-cell lymphoma, and mantle cell lymphoma exhibit distinct gene-expression profiles allowing molecular diagnosis
    • 10.1182/blood-2003-06-2160, 14630827
    • Thieblemont C, Nasser V, Felman P, Leroy K, Gazzo S, Callet-Bauchu E, et al. Small lymphocytic lymphoma, marginal zone B-cell lymphoma, and mantle cell lymphoma exhibit distinct gene-expression profiles allowing molecular diagnosis. Blood 2004, 103:2727-2737. 10.1182/blood-2003-06-2160, 14630827.
    • (2004) Blood , vol.103 , pp. 2727-2737
    • Thieblemont, C.1    Nasser, V.2    Felman, P.3    Leroy, K.4    Gazzo, S.5    Callet-Bauchu, E.6
  • 8
    • 0037069368 scopus 로고    scopus 로고
    • Gene expression comparison of biopsies from Duchenne muscular dystrophy (DMD) and normal skeletal muscle
    • 10.1073/pnas.192571199, 137534, 12415109
    • Haslett JN, Sanoudou D, Kho AT, Bennett RR, Greenberg SA, Kohane IS, et al. Gene expression comparison of biopsies from Duchenne muscular dystrophy (DMD) and normal skeletal muscle. Proc Natl Acad Sci USA 2002, 99:15000-15005. 10.1073/pnas.192571199, 137534, 12415109.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 15000-15005
    • Haslett, J.N.1    Sanoudou, D.2    Kho, A.T.3    Bennett, R.R.4    Greenberg, S.A.5    Kohane, I.S.6
  • 10
    • 0035986911 scopus 로고    scopus 로고
    • Microarray analysis of normal and dystrophic skeletal muscle
    • 10.1016/S0736-5748(02)00041-2, 12175874
    • Haslett JN, Kunkel LM. Microarray analysis of normal and dystrophic skeletal muscle. Int J Dev Neurosci 2002, 20:359-365. 10.1016/S0736-5748(02)00041-2, 12175874.
    • (2002) Int J Dev Neurosci , vol.20 , pp. 359-365
    • Haslett, J.N.1    Kunkel, L.M.2
  • 11
    • 0038177843 scopus 로고    scopus 로고
    • Expression profiling and pharmacogenomics of muscle and muscle disease
    • 10.1016/S1471-4892(03)00041-9, 12810198
    • Hoffman EP, DuBois DC, Hoffman RI, Almon RR. Expression profiling and pharmacogenomics of muscle and muscle disease. Curr Opin Pharmacol 2003, 3:309-316. 10.1016/S1471-4892(03)00041-9, 12810198.
    • (2003) Curr Opin Pharmacol , vol.3 , pp. 309-316
    • Hoffman, E.P.1    DuBois, D.C.2    Hoffman, R.I.3    Almon, R.R.4
  • 12
    • 0242442735 scopus 로고    scopus 로고
    • The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface
    • 10.1093/nar/gkh003, 308738, 14681485
    • Chen J, Zhao P, Massaro D, Clerch LB, Almon RR, DuBois DC, et al. The PEPR GeneChip data warehouse, and implementation of a dynamic time series query tool (SGQT) with graphical interface. Nucleic Acids Res 2004, 32:D578-D581. 10.1093/nar/gkh003, 308738, 14681485.
    • (2004) Nucleic Acids Res , vol.32
    • Chen, J.1    Zhao, P.2    Massaro, D.3    Clerch, L.B.4    Almon, R.R.5    DuBois, D.C.6
  • 13
    • 0036081355 scopus 로고    scopus 로고
    • Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
    • 10.1093/nar/30.1.207, 99122, 11752295
    • Edgar R, Domrachev M, Lash AE. Gene Expression Omnibus: NCBI gene expression and hybridization array data repository. Nucleic Acids Res 2002, 30:207-210. 10.1093/nar/30.1.207, 99122, 11752295.
    • (2002) Nucleic Acids Res , vol.30 , pp. 207-210
    • Edgar, R.1    Domrachev, M.2    Lash, A.E.3
  • 14
    • 0141450348 scopus 로고    scopus 로고
    • Comparison and meta-analysis of microarray data: from the bench to the computer desk
    • 10.1016/j.tig.2003.08.006, 14550631
    • Moreau Y, Aerts S, De MB, De SB, Dabrowski M. Comparison and meta-analysis of microarray data: from the bench to the computer desk. Trends Genet 2003, 19:570-577. 10.1016/j.tig.2003.08.006, 14550631.
    • (2003) Trends Genet , vol.19 , pp. 570-577
    • Moreau, Y.1    Aerts, S.2    De, M.B.3    De, S.B.4    Dabrowski, M.5
  • 15
    • 0036900267 scopus 로고    scopus 로고
    • Options available--from start to finish--for obtaining data from DNA microarrays II
    • 10.1038/ng1030, 12454642
    • Holloway AJ, van Laar RK, Tothill RW, Bowtell DD. Options available--from start to finish--for obtaining data from DNA microarrays II. Nat Genet 2002, 32(Suppl):481-489. 10.1038/ng1030, 12454642.
    • (2002) Nat Genet , vol.32 , Issue.SUPPL , pp. 481-489
    • Holloway, A.J.1    van Laar, R.K.2    Tothill, R.W.3    Bowtell, D.D.4
  • 16
    • 0036211063 scopus 로고    scopus 로고
    • Analysis of matched mRNA measurements from two different microarray technologies
    • 10.1093/bioinformatics/18.3.405, 11934739
    • Kuo WP, Jenssen TK, Butte AJ, Ohno-Machado L, Kohane IS. Analysis of matched mRNA measurements from two different microarray technologies. Bioinformatics 2002, 18:405-412. 10.1093/bioinformatics/18.3.405, 11934739.
    • (2002) Bioinformatics , vol.18 , pp. 405-412
    • Kuo, W.P.1    Jenssen, T.K.2    Butte, A.J.3    Ohno-Machado, L.4    Kohane, I.S.5
  • 17
    • 0141905890 scopus 로고    scopus 로고
    • Evaluation of gene expression measurements from commercial microarray platforms
    • 10.1093/nar/gkg763, 206463, 14500831
    • Tan PK, Downey TJ, Spitznagel EL, Xu P, Fu D, Dimitrov DS, et al. Evaluation of gene expression measurements from commercial microarray platforms. Nucleic Acids Res 2003, 31:5676-5684. 10.1093/nar/gkg763, 206463, 14500831.
    • (2003) Nucleic Acids Res , vol.31 , pp. 5676-5684
    • Tan, P.K.1    Downey, T.J.2    Spitznagel, E.L.3    Xu, P.4    Fu, D.5    Dimitrov, D.S.6
  • 18
    • 18244384210 scopus 로고    scopus 로고
    • Multiple-laboratory comparison of microarray platforms
    • 10.1038/nmeth756, 15846361
    • Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, Frank BC, et al. Multiple-laboratory comparison of microarray platforms. Nat Methods 2005, 2:345-350. 10.1038/nmeth756, 15846361.
    • (2005) Nat Methods , vol.2 , pp. 345-350
    • Irizarry, R.A.1    Warren, D.2    Spencer, F.3    Kim, I.F.4    Biswal, S.5    Frank, B.C.6
  • 19
    • 18244378238 scopus 로고    scopus 로고
    • Independence and reproducibility across microarray platforms
    • 10.1038/nmeth757, 15846360
    • Larkin JE, Frank BC, Gavras H, Sultana R, Quackenbush J. Independence and reproducibility across microarray platforms. Nat Methods 2005, 2:337-344. 10.1038/nmeth757, 15846360.
    • (2005) Nat Methods , vol.2 , pp. 337-344
    • Larkin, J.E.1    Frank, B.C.2    Gavras, H.3    Sultana, R.4    Quackenbush, J.5
  • 20
    • 0036682376 scopus 로고    scopus 로고
    • Meta-analysis of microarrays: interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer
    • Rhodes DR, Barrette TR, Rubin MA, Ghosh D, Chinnaiyan AM. Meta-analysis of microarrays: interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer. Cancer Res 2002, 62:4427-4433.
    • (2002) Cancer Res , vol.62 , pp. 4427-4433
    • Rhodes, D.R.1    Barrette, T.R.2    Rubin, M.A.3    Ghosh, D.4    Chinnaiyan, A.M.5
  • 21
    • 4944232237 scopus 로고    scopus 로고
    • Combining multiple microarray studies and modeling interstudy variation
    • 10.1093/bioinformatics/btg1010, 12855442
    • Choi JK, Yu U, Kim S, Yoo OJ. Combining multiple microarray studies and modeling interstudy variation. Bioinformatics 2003, 19(Suppl 1):i84-i90. 10.1093/bioinformatics/btg1010, 12855442.
    • (2003) Bioinformatics , vol.19 , Issue.SUPPL. 1
    • Choi, J.K.1    Yu, U.2    Kim, S.3    Yoo, O.J.4
  • 22
    • 3042514191 scopus 로고    scopus 로고
    • Coexpression analysis of human genes across many microarray data sets
    • 10.1101/gr.1910904, 419787, 15173114
    • Lee HK, Hsu AK, Sajdak J, Qin J, Pavlidis P. Coexpression analysis of human genes across many microarray data sets. Genome Res 2004, 14:1085-1094. 10.1101/gr.1910904, 419787, 15173114.
    • (2004) Genome Res , vol.14 , pp. 1085-1094
    • Lee, H.K.1    Hsu, A.K.2    Sajdak, J.3    Qin, J.4    Pavlidis, P.5
  • 23
    • 3042694117 scopus 로고    scopus 로고
    • Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression
    • 10.1073/pnas.0401994101, 438973, 15184677
    • Rhodes DR, Yu J, Shanker K, Deshpande N, Varambally R, Ghosh D, et al. Large-scale meta-analysis of cancer microarray data identifies common transcriptional profiles of neoplastic transformation and progression. Proc Natl Acad Sci USA 2004, 101:9309-9314. 10.1073/pnas.0401994101, 438973, 15184677.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 9309-9314
    • Rhodes, D.R.1    Yu, J.2    Shanker, K.3    Deshpande, N.4    Varambally, R.5    Ghosh, D.6
  • 24
    • 20844437991 scopus 로고    scopus 로고
    • Functional annotation and network reconstruction through cross-platform integration of microarray data
    • 10.1038/nbt1058, 15654329
    • Zhou XJ, Kao MC, Huang H, Wong A, Nunez-Iglesias J, Primig M, et al. Functional annotation and network reconstruction through cross-platform integration of microarray data. Nat Biotechnol 2005, 23:238-243. 10.1038/nbt1058, 15654329.
    • (2005) Nat Biotechnol , vol.23 , pp. 238-243
    • Zhou, X.J.1    Kao, M.C.2    Huang, H.3    Wong, A.4    Nunez-Iglesias, J.5    Primig, M.6
  • 25
    • 2342547678 scopus 로고    scopus 로고
    • Integrative analysis of multiple gene expression profiles applied to liver cancer study
    • 10.1016/j.febslet.2004.03.081, 15135059
    • Choi JK, Choi JY, Kim DG, Choi DW, Kim BY, Lee KH, et al. Integrative analysis of multiple gene expression profiles applied to liver cancer study. FEBS Lett 2004, 565:93-100. 10.1016/j.febslet.2004.03.081, 15135059.
    • (2004) FEBS Lett , vol.565 , pp. 93-100
    • Choi, J.K.1    Choi, J.Y.2    Kim, D.G.3    Choi, D.W.4    Kim, B.Y.5    Lee, K.H.6
  • 26
    • 33750475218 scopus 로고    scopus 로고
    • Human fetal neuroblast and neuroblastoma transcriptome analysis confirms neuroblast origin and highlights neuroblastoma candidate genes
    • 10.1186/gb-2006-7-9-r84, 1794547, 16989664
    • De Preter K, Vandesompele J, Heimann P, Yigit N, Beckman S, Schramm A, et al. Human fetal neuroblast and neuroblastoma transcriptome analysis confirms neuroblast origin and highlights neuroblastoma candidate genes. Genome Biol 2006, 7:R84. 10.1186/gb-2006-7-9-r84, 1794547, 16989664.
    • (2006) Genome Biol , vol.7
    • De Preter, K.1    Vandesompele, J.2    Heimann, P.3    Yigit, N.4    Beckman, S.5    Schramm, A.6
  • 27
    • 1542309545 scopus 로고    scopus 로고
    • Statistical issues and methods for meta-analysis of microarray data: a case study in prostate cancer
    • 10.1007/s10142-003-0087-5, 12884057
    • Ghosh D, Barette TR, Rhodes D, Chinnaiyan AM. Statistical issues and methods for meta-analysis of microarray data: a case study in prostate cancer. Funct Integr Genomics 2003, 3:180-188. 10.1007/s10142-003-0087-5, 12884057.
    • (2003) Funct Integr Genomics , vol.3 , pp. 180-188
    • Ghosh, D.1    Barette, T.R.2    Rhodes, D.3    Chinnaiyan, A.M.4
  • 28
    • 10244224128 scopus 로고    scopus 로고
    • Differences in gene expression between B-cell chronic lymphocytic leukemia and normal B cells: a meta-analysis of three microarray studies
    • 10.1093/bioinformatics/bth381, 15231529
    • Wang J, Coombes KR, Highsmith WE, Keating MJ, Abruzzo LV. Differences in gene expression between B-cell chronic lymphocytic leukemia and normal B cells: a meta-analysis of three microarray studies. Bioinformatics 2004, 20:3166-3178. 10.1093/bioinformatics/bth381, 15231529.
    • (2004) Bioinformatics , vol.20 , pp. 3166-3178
    • Wang, J.1    Coombes, K.R.2    Highsmith, W.E.3    Keating, M.J.4    Abruzzo, L.V.5
  • 29
    • 0037862042 scopus 로고    scopus 로고
    • Integration and cross-validation of high-throughput gene expression data: comparing heterogeneous data sets
    • 10.1016/S0014-5793(03)00522-2, 12829243
    • Detours V, Dumont JE, Bersini H, Maenhaut C. Integration and cross-validation of high-throughput gene expression data: comparing heterogeneous data sets. FEBS Lett 2003, 546:98-102. 10.1016/S0014-5793(03)00522-2, 12829243.
    • (2003) FEBS Lett , vol.546 , pp. 98-102
    • Detours, V.1    Dumont, J.E.2    Bersini, H.3    Maenhaut, C.4
  • 30
    • 20044396570 scopus 로고    scopus 로고
    • Integrative analysis of the cancer transcriptome
    • 10.1038/ng1570, 15920528
    • Rhodes DR, Chinnaiyan AM. Integrative analysis of the cancer transcriptome. Nat Genet 2005, 37(Suppl):S31-S37. 10.1038/ng1570, 15920528.
    • (2005) Nat Genet , vol.37 , Issue.SUPPL
    • Rhodes, D.R.1    Chinnaiyan, A.M.2
  • 31
    • 20044388557 scopus 로고    scopus 로고
    • From signatures to models: understanding cancer using microarrays
    • 10.1038/ng1561, 15920529
    • Segal E, Friedman N, Kaminski N, Regev A, Koller D. From signatures to models: understanding cancer using microarrays. Nat Genet 2005, 37(Suppl):S38-S45. 10.1038/ng1561, 15920529.
    • (2005) Nat Genet , vol.37 , Issue.SUPPL
    • Segal, E.1    Friedman, N.2    Kaminski, N.3    Regev, A.4    Koller, D.5
  • 32
    • 29244481995 scopus 로고    scopus 로고
    • Identification of GATA3 as a breast cancer prognostic marker by global gene expression meta-analysis
    • 10.1158/0008-5472.CAN-05-2495, 16357129
    • Mehra R, Varambally S, Ding L, Shen R, Sabel MS, Ghosh D, et al. Identification of GATA3 as a breast cancer prognostic marker by global gene expression meta-analysis. Cancer Res 2005, 65:11259-11264. 10.1158/0008-5472.CAN-05-2495, 16357129.
    • (2005) Cancer Res , vol.65 , pp. 11259-11264
    • Mehra, R.1    Varambally, S.2    Ding, L.3    Shen, R.4    Sabel, M.S.5    Ghosh, D.6
  • 33
    • 0037226593 scopus 로고    scopus 로고
    • A molecular signature of metastasis in primary solid tumors
    • 10.1038/ng1060, 12469122
    • Ramaswamy S, Ross KN, Lander ES, Golub TR. A molecular signature of metastasis in primary solid tumors. Nat Genet 2003, 33:49-54. 10.1038/ng1060, 12469122.
    • (2003) Nat Genet , vol.33 , pp. 49-54
    • Ramaswamy, S.1    Ross, K.N.2    Lander, E.S.3    Golub, T.R.4
  • 34
    • 15944395145 scopus 로고    scopus 로고
    • Insights into host responses against pathogens from transcriptional profiling
    • 10.1038/nrmicro1126, 15806094
    • Jenner RG, Young RA. Insights into host responses against pathogens from transcriptional profiling. Nat Rev Microbiol 2005, 3:281-294. 10.1038/nrmicro1126, 15806094.
    • (2005) Nat Rev Microbiol , vol.3 , pp. 281-294
    • Jenner, R.G.1    Young, R.A.2
  • 35
    • 27644577325 scopus 로고    scopus 로고
    • Bioinformatics approaches for cross-species liver cancer analysis based on microarray gene expression profiling
    • 10.1186/1471-2105-6-S2-S6, 1637037, 16026603
    • Fang H, Tong W, Perkins R, Shi L, Hong H, Cao X, et al. Bioinformatics approaches for cross-species liver cancer analysis based on microarray gene expression profiling. BMC Bioinformatics 2005, 6(Suppl 2):S6. 10.1186/1471-2105-6-S2-S6, 1637037, 16026603.
    • (2005) BMC Bioinformatics , vol.6 , Issue.SUPPL. 2
    • Fang, H.1    Tong, W.2    Perkins, R.3    Shi, L.4    Hong, H.5    Cao, X.6
  • 36
    • 0842267618 scopus 로고    scopus 로고
    • Comparing genomic expression patterns across species identifies shared transcriptional profile in aging
    • 10.1038/ng1291, 14730301
    • McCarroll SA, Murphy CT, Zou S, Pletcher SD, Chin CS, Jan YN, et al. Comparing genomic expression patterns across species identifies shared transcriptional profile in aging. Nat Genet 2004, 36:197-204. 10.1038/ng1291, 14730301.
    • (2004) Nat Genet , vol.36 , pp. 197-204
    • McCarroll, S.A.1    Murphy, C.T.2    Zou, S.3    Pletcher, S.D.4    Chin, C.S.5    Jan, Y.N.6
  • 37
    • 28244499333 scopus 로고    scopus 로고
    • Analysis of orthologous gene expression between human pulmonary adenocarcinoma and a carcinogen-induced murine model
    • 10.1016/S0002-9440(10)61257-6, 1613183, 16314486
    • Stearman RS, Dwyer-Nield L, Zerbe L, Blaine SA, Chan Z, Bunn PA, et al. Analysis of orthologous gene expression between human pulmonary adenocarcinoma and a carcinogen-induced murine model. Am J Pathol 2005, 167:1763-1775. 10.1016/S0002-9440(10)61257-6, 1613183, 16314486.
    • (2005) Am J Pathol , vol.167 , pp. 1763-1775
    • Stearman, R.S.1    Dwyer-Nield, L.2    Zerbe, L.3    Blaine, S.A.4    Chan, Z.5    Bunn, P.A.6
  • 38
    • 33745075898 scopus 로고    scopus 로고
    • The expression signature of in vitro senescence resembles mouse but not human aging
    • 10.1186/gb-2005-6-13-r109, 1414108, 16420669
    • Wennmalm K, Wahlestedt C, Larsson O. The expression signature of in vitro senescence resembles mouse but not human aging. Genome Biol 2005, 6:R109. 10.1186/gb-2005-6-13-r109, 1414108, 16420669.
    • (2005) Genome Biol , vol.6
    • Wennmalm, K.1    Wahlestedt, C.2    Larsson, O.3
  • 40
    • 0141993704 scopus 로고    scopus 로고
    • A gene-coexpression network for global discovery of conserved genetic modules
    • 10.1126/science.1087447, 12934013
    • Stuart JM, Segal E, Koller D, Kim SK. A gene-coexpression network for global discovery of conserved genetic modules. Science 2003, 302:249-255. 10.1126/science.1087447, 12934013.
    • (2003) Science , vol.302 , pp. 249-255
    • Stuart, J.M.1    Segal, E.2    Koller, D.3    Kim, S.K.4
  • 41
    • 0037007048 scopus 로고    scopus 로고
    • Large-scale analysis of the human and mouse transcriptomes
    • 10.1073/pnas.012025199, 123671, 11904358
    • Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, Wiltshire T, et al. Large-scale analysis of the human and mouse transcriptomes. Proc Natl Acad Sci USA 2002, 99:4465-4470. 10.1073/pnas.012025199, 123671, 11904358.
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 4465-4470
    • Su, A.I.1    Cooke, M.P.2    Ching, K.A.3    Hakak, Y.4    Walker, J.R.5    Wiltshire, T.6
  • 42
    • 34547839797 scopus 로고    scopus 로고
    • Mutant huntingtin's effects on striatal gene expression in mice recapitulate changes observed in human Huntington's disease brain and do not differ with mutant huntingtin length or wild-type huntingtin dosage
    • 10.1093/hmg/ddm133, 17519223
    • Kuhn A, Goldstein DR, Hodges A, Strand AD, Sengstag T, Kooperberg C, et al. Mutant huntingtin's effects on striatal gene expression in mice recapitulate changes observed in human Huntington's disease brain and do not differ with mutant huntingtin length or wild-type huntingtin dosage. Hum Mol Genet 2007, 16:1845-1861. 10.1093/hmg/ddm133, 17519223.
    • (2007) Hum Mol Genet , vol.16 , pp. 1845-1861
    • Kuhn, A.1    Goldstein, D.R.2    Hodges, A.3    Strand, A.D.4    Sengstag, T.5    Kooperberg, C.6
  • 43
    • 4644262045 scopus 로고    scopus 로고
    • Orthologous gene-expression profiling in multi-species models: search for candidate genes
    • 10.1186/gb-2004-5-5-r34, 416470, 15128448
    • Grigoryev DN, Ma SF, Irizarry RA, Ye SQ, Quackenbush J, Garcia JG. Orthologous gene-expression profiling in multi-species models: search for candidate genes. Genome Biol 2004, 5:R34. 10.1186/gb-2004-5-5-r34, 416470, 15128448.
    • (2004) Genome Biol , vol.5
    • Grigoryev, D.N.1    Ma, S.F.2    Irizarry, R.A.3    Ye, S.Q.4    Quackenbush, J.5    Garcia, J.G.6
  • 44
    • 60549085643 scopus 로고    scopus 로고
    • Meta-analysis of expression signatures of muscle atrophy: gene interaction networks in early and late stages
    • 10.1186/1471-2164-9-630, 2642825, 19108710
    • Calura E, Cagnin S, Raffaello A, Laveder P, Lanfranchi G, Romualdi C. Meta-analysis of expression signatures of muscle atrophy: gene interaction networks in early and late stages. BMC Genomics 2008, 9:630. 10.1186/1471-2164-9-630, 2642825, 19108710.
    • (2008) BMC Genomics , vol.9 , pp. 630
    • Calura, E.1    Cagnin, S.2    Raffaello, A.3    Laveder, P.4    Lanfranchi, G.5    Romualdi, C.6
  • 45
    • 47249122659 scopus 로고    scopus 로고
    • Literature-aided meta-analysis of microarray data: a compendium study on muscle development and disease
    • 10.1186/1471-2105-9-291, 2459190, 18577208
    • Jelier R, 't Hoen PA, Sterrenburg E, den Dunnen JT, van Ommen GJ, Kors JA, et al. Literature-aided meta-analysis of microarray data: a compendium study on muscle development and disease. BMC Bioinformatics 2008, 9:291. 10.1186/1471-2105-9-291, 2459190, 18577208.
    • (2008) BMC Bioinformatics , vol.9 , pp. 291
    • Jelier, R.1    't Hoen, P.A.2    Sterrenburg, E.3    den Dunnen, J.T.4    van Ommen, G.J.5    Kors, J.A.6
  • 46
    • 33745460647 scopus 로고    scopus 로고
    • Cockayne syndrome group B protein (CSB) plays a general role in chromatin maintenance and remodeling
    • 10.1073/pnas.0510909103, 1480455, 16772382
    • Newman JC, Bailey AD, Weiner AM. Cockayne syndrome group B protein (CSB) plays a general role in chromatin maintenance and remodeling. Proc Natl Acad Sci USA 2006, 103:9613-9618. 10.1073/pnas.0510909103, 1480455, 16772382.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 9613-9618
    • Newman, J.C.1    Bailey, A.D.2    Weiner, A.M.3
  • 47
    • 26444563353 scopus 로고    scopus 로고
    • List of lists-annotated (LOLA): a database for annotation and comparison of published microarray gene lists
    • 10.1016/j.gene.2005.07.008, 16140476
    • Cahan P, Ahmad AM, Burke H, Fu S, Lai Y, Florea L, et al. List of lists-annotated (LOLA): a database for annotation and comparison of published microarray gene lists. Gene 2005, 360:78-82. 10.1016/j.gene.2005.07.008, 16140476.
    • (2005) Gene , vol.360 , pp. 78-82
    • Cahan, P.1    Ahmad, A.M.2    Burke, H.3    Fu, S.4    Lai, Y.5    Florea, L.6
  • 48
    • 33744975264 scopus 로고    scopus 로고
    • L2L: a simple tool for discovering the hidden significance in microarray expression data
    • 10.1186/gb-2005-6-9-r81, 1242216, 16168088
    • Newman JC, Weiner AM. L2L: a simple tool for discovering the hidden significance in microarray expression data. Genome Biol 2005, 6:R81. 10.1186/gb-2005-6-9-r81, 1242216, 16168088.
    • (2005) Genome Biol , vol.6
    • Newman, J.C.1    Weiner, A.M.2
  • 49
    • 33750965890 scopus 로고    scopus 로고
    • Comparative microarray analysis
    • 10.1089/omi.2006.10.381, 17069515
    • Larsson O, Wennmalm K, Sandberg R. Comparative microarray analysis. OMICS 2006, 10:381-397. 10.1089/omi.2006.10.381, 17069515.
    • (2006) OMICS , vol.10 , pp. 381-397
    • Larsson, O.1    Wennmalm, K.2    Sandberg, R.3
  • 50
    • 33750879597 scopus 로고    scopus 로고
    • Lack of correct data format and comparability limits future integrative microarray research
    • 10.1038/nbt1106-1322, 17093466
    • Larsson O, Sandberg R. Lack of correct data format and comparability limits future integrative microarray research. Nat Biotechnol 2006, 24:1322-1323. 10.1038/nbt1106-1322, 17093466.
    • (2006) Nat Biotechnol , vol.24 , pp. 1322-1323
    • Larsson, O.1    Sandberg, R.2
  • 51
    • 1642377561 scopus 로고    scopus 로고
    • ONCOMINE: a cancer microarray database and integrated data-mining platform
    • 1635162, 15068665
    • Rhodes DR, Yu J, Shanker K, Deshpande N, Varambally R, Ghosh D, et al. ONCOMINE: a cancer microarray database and integrated data-mining platform. Neoplasia 2004, 6:1-6. 1635162, 15068665.
    • (2004) Neoplasia , vol.6 , pp. 1-6
    • Rhodes, D.R.1    Yu, J.2    Shanker, K.3    Deshpande, N.4    Varambally, R.5    Ghosh, D.6
  • 52
    • 62349088493 scopus 로고    scopus 로고
    • GeneChaser: identifying all biological and clinical conditions in which genes of interest are differentially expressed
    • 10.1186/1471-2105-9-548, 2629779, 19094235
    • Chen R, Mallelwar R, Thosar A, Venkatasubrahmanyam S, Butte AJ. GeneChaser: identifying all biological and clinical conditions in which genes of interest are differentially expressed. BMC Bioinformatics 2008, 9:548. 10.1186/1471-2105-9-548, 2629779, 19094235.
    • (2008) BMC Bioinformatics , vol.9 , pp. 548
    • Chen, R.1    Mallelwar, R.2    Thosar, A.3    Venkatasubrahmanyam, S.4    Butte, A.J.5
  • 53
    • 33749335282 scopus 로고    scopus 로고
    • The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease
    • 10.1126/science.1132939, 17008526
    • Lamb J, Crawford ED, Peck D, Modell JW, Blat IC, Wrobel MJ, et al. The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease. Science 2006, 313:1929-1935. 10.1126/science.1132939, 17008526.
    • (2006) Science , vol.313 , pp. 1929-1935
    • Lamb, J.1    Crawford, E.D.2    Peck, D.3    Modell, J.W.4    Blat, I.C.5    Wrobel, M.J.6
  • 54
    • 39749096174 scopus 로고    scopus 로고
    • Strategy for encoding and comparison of gene expression signatures
    • 10.1186/gb-2007-8-7-r133, 2323223, 17612401
    • Yi Y, Li C, Miller C, George AL. Strategy for encoding and comparison of gene expression signatures. Genome Biol 2007, 8:R133. 10.1186/gb-2007-8-7-r133, 2323223, 17612401.
    • (2007) Genome Biol , vol.8
    • Yi, Y.1    Li, C.2    Miller, C.3    George, A.L.4
  • 55
    • 0032441150 scopus 로고    scopus 로고
    • Cluster analysis and display of genome-wide expression patterns
    • 10.1073/pnas.95.25.14863, 24541, 9843981
    • Eisen MB, Spellman PT, Brown PO, Botstein D. Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci USA 1998, 95:14863-14868. 10.1073/pnas.95.25.14863, 24541, 9843981.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 14863-14868
    • Eisen, M.B.1    Spellman, P.T.2    Brown, P.O.3    Botstein, D.4
  • 56
    • 0034616930 scopus 로고    scopus 로고
    • Functional discovery via a compendium of expression profiles
    • 10.1016/S0092-8674(00)00015-5, 10929718
    • Hughes TR, Marton MJ, Jones AR, Roberts CJ, Stoughton R, Armour CD, et al. Functional discovery via a compendium of expression profiles. Cell 2000, 102:109-126. 10.1016/S0092-8674(00)00015-5, 10929718.
    • (2000) Cell , vol.102 , pp. 109-126
    • Hughes, T.R.1    Marton, M.J.2    Jones, A.R.3    Roberts, C.J.4    Stoughton, R.5    Armour, C.D.6
  • 57
    • 6944244084 scopus 로고    scopus 로고
    • A module map showing conditional activity of expression modules in cancer
    • 10.1038/ng1434, 15448693
    • Segal E, Friedman N, Koller D, Regev A. A module map showing conditional activity of expression modules in cancer. Nat Genet 2004, 36:1090-1098. 10.1038/ng1434, 15448693.
    • (2004) Nat Genet , vol.36 , pp. 1090-1098
    • Segal, E.1    Friedman, N.2    Koller, D.3    Regev, A.4
  • 58
    • 33846112971 scopus 로고    scopus 로고
    • Gene Aging Nexus: a web database and data mining platform for microarray data on aging
    • 10.1093/nar/gkl798, 1669755, 17090592
    • Pan F, Chiu CH, Pulapura S, Mehan MR, Nunez-Iglesias J, Zhang K, et al. Gene Aging Nexus: a web database and data mining platform for microarray data on aging. Nucleic Acids Res 2007, 35:D756-D759. 10.1093/nar/gkl798, 1669755, 17090592.
    • (2007) Nucleic Acids Res , vol.35
    • Pan, F.1    Chiu, C.H.2    Pulapura, S.3    Mehan, M.R.4    Nunez-Iglesias, J.5    Zhang, K.6
  • 59
    • 0034960264 scopus 로고    scopus 로고
    • Missing value estimation methods for DNA microarrays
    • 10.1093/bioinformatics/17.6.520, 11395428
    • Troyanskaya O, Cantor M, Sherlock G, Brown P, Hastie T, Tibshirani R, et al. Missing value estimation methods for DNA microarrays. Bioinformatics 2001, 17:520-525. 10.1093/bioinformatics/17.6.520, 11395428.
    • (2001) Bioinformatics , vol.17 , pp. 520-525
    • Troyanskaya, O.1    Cantor, M.2    Sherlock, G.3    Brown, P.4    Hastie, T.5    Tibshirani, R.6
  • 60
    • 1342294092 scopus 로고    scopus 로고
    • Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation
    • 10.1093/nar/30.4.e15, 100354, 11842121
    • Yang YH, Dudoit S, Luu P, Lin DM, Peng V, Ngai J, et al. Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res 2002, 30:e15. 10.1093/nar/30.4.e15, 100354, 11842121.
    • (2002) Nucleic Acids Res , vol.30
    • Yang, Y.H.1    Dudoit, S.2    Luu, P.3    Lin, D.M.4    Peng, V.5    Ngai, J.6
  • 61
    • 36849062259 scopus 로고    scopus 로고
    • Androgen-induced masculinization in rainbow trout results in a marked dysregulation of early gonadal gene expression profiles
    • 10.1186/1471-2164-8-357, 2099445, 17916255
    • Baron D, Montfort J, Houlgatte R, Fostier A, Guiguen Y. Androgen-induced masculinization in rainbow trout results in a marked dysregulation of early gonadal gene expression profiles. BMC Genomics 2007, 8:357. 10.1186/1471-2164-8-357, 2099445, 17916255.
    • (2007) BMC Genomics , vol.8 , pp. 357
    • Baron, D.1    Montfort, J.2    Houlgatte, R.3    Fostier, A.4    Guiguen, Y.5
  • 62
    • 77955141459 scopus 로고    scopus 로고
    • Molecular risk stratification in advanced heart failure patients
    • 10.1111/j.1582-4934.2009.00913.x, 19793385
    • Lamirault G, Le MN, Roussel JC, Le Cunff MF, Baron D, Bihouee A, et al. Molecular risk stratification in advanced heart failure patients. J Cell Mol Med 2010, 14(6B):1443-52. 10.1111/j.1582-4934.2009.00913.x, 19793385.
    • (2010) J Cell Mol Med , vol.14 , Issue.6 , pp. 1443-1452
    • Lamirault, G.1    Le, M.N.2    Roussel, J.C.3    Le Cunff, M.F.4    Baron, D.5    Bihouee, A.6
  • 63
    • 0037200201 scopus 로고    scopus 로고
    • A new non-linear normalization method for reducing variability in DNA microarray experiments
    • 10.1186/gb-2002-3-9-research0048, 126873, 12225587
    • Workman C, Jensen LJ, Jarmer H, Berka R, Gautier L, Nielser HB, et al. A new non-linear normalization method for reducing variability in DNA microarray experiments. Genome Biol 2002, 3:research0048. 10.1186/gb-2002-3-9-research0048, 126873, 12225587.
    • (2002) Genome Biol , vol.3
    • Workman, C.1    Jensen, L.J.2    Jarmer, H.3    Berka, R.4    Gautier, L.5    Nielser, H.B.6
  • 64
    • 3142756502 scopus 로고    scopus 로고
    • Open source clustering software
    • 10.1093/bioinformatics/bth078, 14871861
    • de Hoon MJ, Imoto S, Nolan J, Miyano S. Open source clustering software. Bioinformatics 2004, 20:1453-1454. 10.1093/bioinformatics/bth078, 14871861.
    • (2004) Bioinformatics , vol.20 , pp. 1453-1454
    • de Hoon, M.J.1    Imoto, S.2    Nolan, J.3    Miyano, S.4
  • 65
    • 25144458094 scopus 로고    scopus 로고
    • Large-scale temporal gene expression profiling during gonadal differentiation and early gametogenesis in rainbow trout
    • 10.1095/biolreprod.105.041830, 16014816
    • Baron D, Houlgatte R, Fostier A, Guiguen Y. Large-scale temporal gene expression profiling during gonadal differentiation and early gametogenesis in rainbow trout. Biol Reprod 2005, 73:959-966. 10.1095/biolreprod.105.041830, 16014816.
    • (2005) Biol Reprod , vol.73 , pp. 959-966
    • Baron, D.1    Houlgatte, R.2    Fostier, A.3    Guiguen, Y.4
  • 66
    • 0033028596 scopus 로고    scopus 로고
    • Systematic determination of genetic network architecture
    • 10.1038/10343, 10391217
    • Tavazoie S, Hughes JD, Campbell MJ, Cho RJ, Church GM. Systematic determination of genetic network architecture. Nat Genet 1999, 22:281-285. 10.1038/10343, 10391217.
    • (1999) Nat Genet , vol.22 , pp. 281-285
    • Tavazoie, S.1    Hughes, J.D.2    Campbell, M.J.3    Cho, R.J.4    Church, G.M.5
  • 67
    • 0000014486 scopus 로고
    • Cluster Analysis of Multivariate Data: Efficiency vs. Interpretability of Classification
    • Forgy EW. Cluster Analysis of Multivariate Data: Efficiency vs. Interpretability of Classification. Biometrics 1965, 21:768-780.
    • (1965) Biometrics , vol.21 , pp. 768-780
    • Forgy, E.W.1
  • 70
    • 79951975636 scopus 로고    scopus 로고
    • MADGene: retrieval and processing of gene identifier lists for the analysis of heterogeneous microarray datasets
    • Baron D, Bihouee A, Teusan R, Dubois E, Savagner F, Steenman M, et al. MADGene: retrieval and processing of gene identifier lists for the analysis of heterogeneous microarray datasets. Bioinformatics 2011,
    • (2011) Bioinformatics
    • Baron, D.1    Bihouee, A.2    Teusan, R.3    Dubois, E.4    Savagner, F.5    Steenman, M.6
  • 71
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
    • 10.1038/75556, 3037419, 10802651
    • Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, et al. Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 2000, 25:25-29. 10.1038/75556, 3037419, 10802651.
    • (2000) Nat Genet , vol.25 , pp. 25-29
    • Ashburner, M.1    Ball, C.A.2    Blake, J.A.3    Botstein, D.4    Butler, H.5    Cherry, J.M.6
  • 72
    • 0038175144 scopus 로고    scopus 로고
    • GoMiner: a resource for biological interpretation of genomic and proteomic data
    • 10.1186/gb-2003-4-4-r28, 154579, 12702209
    • Zeeberg BR, Feng W, Wang G, Wang MD, Fojo AT, Sunshine M, et al. GoMiner: a resource for biological interpretation of genomic and proteomic data. Genome Biol 2003, 4:R28. 10.1186/gb-2003-4-4-r28, 154579, 12702209.
    • (2003) Genome Biol , vol.4
    • Zeeberg, B.R.1    Feng, W.2    Wang, G.3    Wang, M.D.4    Fojo, A.T.5    Sunshine, M.6
  • 73
    • 2442545413 scopus 로고    scopus 로고
    • A cross-study comparison of gene expression studies for the molecular classification of lung cancer
    • 10.1158/1078-0432.CCR-03-0490, 15131026
    • Parmigiani G, Garrett-Mayer ES, Anbazhagan R, Gabrielson E. A cross-study comparison of gene expression studies for the molecular classification of lung cancer. Clin Cancer Res 2004, 10:2922-2927. 10.1158/1078-0432.CCR-03-0490, 15131026.
    • (2004) Clin Cancer Res , vol.10 , pp. 2922-2927
    • Parmigiani, G.1    Garrett-Mayer, E.S.2    Anbazhagan, R.3    Gabrielson, E.4
  • 74
    • 0346494934 scopus 로고    scopus 로고
    • Genew: the Human Gene Nomenclature Database, 2004 updates
    • 10.1093/nar/gkh072, 308806, 14681406
    • Wain HM, Lush MJ, Ducluzeau F, Khodiyar VK, Povey S. Genew: the Human Gene Nomenclature Database, 2004 updates. Nucleic Acids Res 2004, 32:D255-D257. 10.1093/nar/gkh072, 308806, 14681406.
    • (2004) Nucleic Acids Res , vol.32
    • Wain, H.M.1    Lush, M.J.2    Ducluzeau, F.3    Khodiyar, V.K.4    Povey, S.5
  • 75
    • 11244338157 scopus 로고    scopus 로고
    • An evolutionary and functional analysis of FoxL2 in rainbow trout gonad differentiation
    • 10.1677/jme.1.01566, 15591029
    • Baron D, Cocquet J, Xia X, Fellous M, Guiguen Y, Veitia RA. An evolutionary and functional analysis of FoxL2 in rainbow trout gonad differentiation. J Mol Endocrinol 2004, 33:705-715. 10.1677/jme.1.01566, 15591029.
    • (2004) J Mol Endocrinol , vol.33 , pp. 705-715
    • Baron, D.1    Cocquet, J.2    Xia, X.3    Fellous, M.4    Guiguen, Y.5    Veitia, R.A.6
  • 76
    • 75149134754 scopus 로고    scopus 로고
    • Estrogen-related receptor alpha and PGC-1-related coactivator constitute a novel complex mediating the biogenesis of functional mitochondria
    • 10.1111/j.1742-4658.2009.07516.x, 20067526
    • Mirebeau-Prunier D, Le PS, Jacques C, Gueguen N, Poirier J, Malthiery Y, et al. Estrogen-related receptor alpha and PGC-1-related coactivator constitute a novel complex mediating the biogenesis of functional mitochondria. FEBS J 2010, 277:713-725. 10.1111/j.1742-4658.2009.07516.x, 20067526.
    • (2010) FEBS J , vol.277 , pp. 713-725
    • Mirebeau-Prunier, D.1    Le, P.S.2    Jacques, C.3    Gueguen, N.4    Poirier, J.5    Malthiery, Y.6
  • 78
    • 0034638834 scopus 로고    scopus 로고
    • Expression profiling in the muscular dystrophies: identification of novel aspects of molecular pathophysiology
    • 10.1083/jcb.151.6.1321, 2190600, 11121445
    • Chen YW, Zhao P, Borup R, Hoffman EP. Expression profiling in the muscular dystrophies: identification of novel aspects of molecular pathophysiology. J Cell Biol 2000, 151:1321-1336. 10.1083/jcb.151.6.1321, 2190600, 11121445.
    • (2000) J Cell Biol , vol.151 , pp. 1321-1336
    • Chen, Y.W.1    Zhao, P.2    Borup, R.3    Hoffman, E.P.4
  • 79
    • 0141568971 scopus 로고    scopus 로고
    • Gene expression profiling of Duchenne muscular dystrophy skeletal muscle
    • 10.1007/s10048-003-0148-x, 12698323
    • Haslett JN, Sanoudou D, Kho AT, Han M, Bennett RR, Kohane IS, et al. Gene expression profiling of Duchenne muscular dystrophy skeletal muscle. Neurogenetics 2003, 4:163-171. 10.1007/s10048-003-0148-x, 12698323.
    • (2003) Neurogenetics , vol.4 , pp. 163-171
    • Haslett, J.N.1    Sanoudou, D.2    Kho, A.T.3    Han, M.4    Bennett, R.R.5    Kohane, I.S.6
  • 80
    • 32644441628 scopus 로고    scopus 로고
    • Nuclear envelope dystrophies show a transcriptional fingerprint suggesting disruption of Rb-MyoD pathways in muscle regeneration
    • 10.1093/brain/awl023, 16478798
    • Bakay M, Wang Z, Melcon G, Schiltz L, Xuan J, Zhao P, et al. Nuclear envelope dystrophies show a transcriptional fingerprint suggesting disruption of Rb-MyoD pathways in muscle regeneration. Brain 2006, 129:996-1013. 10.1093/brain/awl023, 16478798.
    • (2006) Brain , vol.129 , pp. 996-1013
    • Bakay, M.1    Wang, Z.2    Melcon, G.3    Schiltz, L.4    Xuan, J.5    Zhao, P.6
  • 81
    • 33947655852 scopus 로고    scopus 로고
    • Gene expression profiling in the early phases of DMD: a constant molecular signature characterizes DMD muscle from early postnatal life throughout disease progression
    • 10.1096/fj.06-7285com, 17264171
    • Pescatori M, Broccolini A, Minetti C, Bertini E, Bruno C, D'amico A, et al. Gene expression profiling in the early phases of DMD: a constant molecular signature characterizes DMD muscle from early postnatal life throughout disease progression. FASEB J 2007, 21:1210-1226. 10.1096/fj.06-7285com, 17264171.
    • (2007) FASEB J , vol.21 , pp. 1210-1226
    • Pescatori, M.1    Broccolini, A.2    Minetti, C.3    Bertini, E.4    Bruno, C.5    D'amico, A.6
  • 82
    • 33751183096 scopus 로고    scopus 로고
    • Defining the gene expression signature of rhabdomyosarcoma by meta-analysis
    • 10.1186/1471-2164-7-287, 1636648, 17090319
    • Romualdi C, De PC, Tombolan L, Bortoluzzi S, Sartori F, Rosolen A, et al. Defining the gene expression signature of rhabdomyosarcoma by meta-analysis. BMC Genomics 2006, 7:287. 10.1186/1471-2164-7-287, 1636648, 17090319.
    • (2006) BMC Genomics , vol.7 , pp. 287
    • Romualdi, C.1    De, P.C.2    Tombolan, L.3    Bortoluzzi, S.4    Sartori, F.5    Rosolen, A.6
  • 83
    • 0011422129 scopus 로고    scopus 로고
    • Multidimensional Scaling - Monographs on Statistics and Applied Probability 88
    • Boca Raton (FL, USA): Chapman and Hall/CRC
    • Cox TF, Cox MAA. Multidimensional Scaling - Monographs on Statistics and Applied Probability 88. 2001, Boca Raton (FL, USA): Chapman and Hall/CRC.
    • (2001)
    • Cox, T.F.1    Cox, M.A.A.2
  • 84
    • 24144489118 scopus 로고    scopus 로고
    • Cellular and molecular signatures of muscle regeneration: current concepts and controversies in adult myogenesis
    • 10.1016/j.cell.2005.08.021, 16143100
    • Wagers AJ, Conboy IM. Cellular and molecular signatures of muscle regeneration: current concepts and controversies in adult myogenesis. Cell 2005, 122:659-667. 10.1016/j.cell.2005.08.021, 16143100.
    • (2005) Cell , vol.122 , pp. 659-667
    • Wagers, A.J.1    Conboy, I.M.2
  • 85
    • 77649273813 scopus 로고    scopus 로고
    • Identification and characterization of a non-satellite cell muscle resident progenitor during postnatal development
    • Mitchell KJ, Pannerec A, Cadot B, Parlakian A, Besson V, Gomes ER, et al. Identification and characterization of a non-satellite cell muscle resident progenitor during postnatal development. Nat Cell Biol 2010, 12:257-266.
    • (2010) Nat Cell Biol , vol.12 , pp. 257-266
    • Mitchell, K.J.1    Pannerec, A.2    Cadot, B.3    Parlakian, A.4    Besson, V.5    Gomes, E.R.6
  • 86
    • 0028292950 scopus 로고
    • Single-fiber electromyography in neuromuscular disorders: correlation of muscle histochemistry, single-fiber electromyography, and clinical findings
    • 10.1002/mus.880170314, 8107713
    • Bertorini TE, Stalberg E, Yuson CP, Engel WK. Single-fiber electromyography in neuromuscular disorders: correlation of muscle histochemistry, single-fiber electromyography, and clinical findings. Muscle Nerve 1994, 17:345-353. 10.1002/mus.880170314, 8107713.
    • (1994) Muscle Nerve , vol.17 , pp. 345-353
    • Bertorini, T.E.1    Stalberg, E.2    Yuson, C.P.3    Engel, W.K.4
  • 87
    • 0020597279 scopus 로고
    • Reinnervation in Duchenne muscular dystrophy
    • 10.1002/mus.880060409, 6866009
    • Dubrovsky A, Taratuto AL. Reinnervation in Duchenne muscular dystrophy. Muscle Nerve 1983, 6:299-302. 10.1002/mus.880060409, 6866009.
    • (1983) Muscle Nerve , vol.6 , pp. 299-302
    • Dubrovsky, A.1    Taratuto, A.L.2


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