-
1
-
-
0033961690
-
The kelch repeat superfamily of proteins: Propellers of cell function
-
Adams J, Kelso R, Cooley L (2000) The kelch repeat superfamily of proteins: propellers of cell function. Trends Cell Biol 10: 17-24
-
(2000)
Trends Cell Biol
, vol.10
, pp. 17-24
-
-
Adams, J.1
Kelso, R.2
Cooley, L.3
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
77956854573
-
Ethylene-induced stabilization of ETHYLENE INSENSITIVE3 and EIN3-LIKE1 is mediated by proteasomal degradation of EIN3 binding F-box 1 and 2 that requires EIN2 in Arabidopsis
-
An F, Zhao Q, Ji Y, Li W, Jiang Z, Yu X, Zhang C, Han Y, He W, Liu Y, et al (2010) Ethylene-induced stabilization of ETHYLENE INSENSITIVE3 and EIN3-LIKE1 is mediated by proteasomal degradation of EIN3 binding F-box 1 and 2 that requires EIN2 in Arabidopsis. Plant Cell 22: 2384-2401
-
(2010)
Plant Cell
, vol.22
, pp. 2384-2401
-
-
An, F.1
Zhao, Q.2
Ji, Y.3
Li, W.4
Jiang, Z.5
Yu, X.6
Zhang, C.7
Han, Y.8
He, W.9
Liu, Y.10
-
4
-
-
0034881468
-
A combination of the F-box motif and kelch repeats defines a large Arabidopsis family of F-box proteins
-
Andrade MA, González-Guzmán M, Serrano R, Rodríguez PL (2001) A combination of the F-box motif and kelch repeats defines a large Arabidopsis family of F-box proteins. Plant Mol Biol 46: 603-614
-
(2001)
Plant Mol Biol
, vol.46
, pp. 603-614
-
-
Andrade, M.A.1
González-Guzmán, M.2
Serrano, R.3
Rodríguez, P.L.4
-
5
-
-
0027255909
-
Elimination of false positives that arise in using the two-hybrid system
-
Bartel P, Chien CT, Sternglanz R, Fields S (1993) Elimination of false positives that arise in using the two-hybrid system. Biotechniques 14: 920-924
-
(1993)
Biotechniques
, vol.14
, pp. 920-924
-
-
Bartel, P.1
Chien, C.T.2
Sternglanz, R.3
Fields, S.4
-
6
-
-
77953198654
-
F-box proteins FKF1 and LKP2 act in concert with ZEITLUPE to control Arabidopsis clock progression
-
Baudry A, Ito S, Song YH, Strait AA, Kiba T, Lu S, Henriques R, Pruneda- Paz JL, Chua NH, Tobin EM, et al (2010) F-box proteins FKF1 and LKP2 act in concert with ZEITLUPE to control Arabidopsis clock progression. Plant Cell 22: 606-622
-
(2010)
Plant Cell
, vol.22
, pp. 606-622
-
-
Baudry, A.1
Ito, S.2
Song, Y.H.3
Strait, A.A.4
Kiba, T.5
Lu, S.6
Henriques, R.7
Pruneda-Paz, J.L.8
Chua, N.H.9
Tobin, E.M.10
-
7
-
-
34250675590
-
The Arabidopsis EIN3 binding F-box proteins EBF1 and EBF2 have distinct but overlapping roles in ethylene signaling
-
Binder BM, Walker JM, Gagné JM, Emborg TJ, Hemmann G, Bleecker AB, Vierstra RD (2007) The Arabidopsis EIN3 binding F-box proteins EBF1 and EBF2 have distinct but overlapping roles in ethylene signaling. Plant Cell 19: 509-523
-
(2007)
Plant Cell
, vol.19
, pp. 509-523
-
-
Binder, B.M.1
Walker, J.M.2
Gagné, J.M.3
Emborg, T.J.4
Hemmann, G.5
Bleecker, A.B.6
Vierstra, R.D.7
-
8
-
-
0037313579
-
A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome
-
Blanc G, Hokamp K, Wolfe KH (2003) A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome. Genome Res 13: 137-144
-
(2003)
Genome Res
, vol.13
, pp. 137-144
-
-
Blanc, G.1
Hokamp, K.2
Wolfe, K.H.3
-
9
-
-
64749095658
-
The RPN5 subunit of the 26s proteasome is essential for gametogenesis, sporophyte development, and complex assembly in Arabidopsis
-
Book AJ, Smalle J, Lee KH, Yang P, Walker JM, Casper S, Holmes JH, Russo LA, Buzzinotti ZW, Jenik PD, Vierstra RD (2009) The RPN5 subunit of the 26s proteasome is essential for gametogenesis, sporophyte development, and complex assembly in Arabidopsis. Plant Cell 21: 460-478
-
(2009)
Plant Cell
, vol.21
, pp. 460-478
-
-
Book, A.J.1
Smalle, J.2
Lee, K.H.3
Yang, P.4
Walker, J.M.5
Casper, S.6
Holmes, J.H.7
Russo, L.A.8
Buzzinotti, Z.W.9
Jenik, P.D.10
Vierstra, R.D.11
-
10
-
-
0028231273
-
Drosophila kelch motif is derived from a common enzyme fold
-
Bork P, Doolittle RF (1994) Drosophila kelch motif is derived from a common enzyme fold. J Mol Biol 236: 1277-1282
-
(1994)
J Mol Biol
, vol.236
, pp. 1277-1282
-
-
Bork, P.1
Doolittle, R.F.2
-
11
-
-
0037468758
-
Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events
-
Bowers JE, Chapman BA, Rong JK, Paterson AH (2003) Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. Nature 422: 433-438
-
(2003)
Nature
, vol.422
, pp. 433-438
-
-
Bowers, J.E.1
Chapman, B.A.2
Rong, J.K.3
Paterson, A.H.4
-
12
-
-
4444318673
-
The SCF ubiquitin ligase: Insights into a molecular machine
-
Cardozo T, Pagano M (2004) The SCF ubiquitin ligase: insights into a molecular machine. Nat Rev Mol Cell Biol 5: 739-751
-
(2004)
Nat Rev Mol Cell Biol
, vol.5
, pp. 739-751
-
-
Cardozo, T.1
Pagano, M.2
-
13
-
-
43049100743
-
An Arabidopsis F-box protein acts as a transcriptional co-factor to regulate floral development
-
Chae E, Tan QK, Hill TA, Irish VF (2008) An Arabidopsis F-box protein acts as a transcriptional co-factor to regulate floral development. Development 135: 1235-1245
-
(2008)
Development
, vol.135
, pp. 1235-1245
-
-
Chae, E.1
Tan, Q.K.2
Hill, T.A.3
Irish, V.F.4
-
14
-
-
34547108086
-
Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana
-
Clark RM, Schweikert G, Toomajian C, Ossowski S, Zeller G, Shinn P, Warthmann N, Hu TT, Fu G, Hinds DA, et al (2007) Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science 317: 338-342
-
(2007)
Science
, vol.317
, pp. 338-342
-
-
Clark, R.M.1
Schweikert, G.2
Toomajian, C.3
Ossowski, S.4
Zeller, G.5
Shinn, P.6
Warthmann, N.7
Hu, T.T.8
Fu, G.9
Hinds, D.A.10
-
15
-
-
77956812192
-
Natural variation of transcriptional auxin response networks in Arabidopsis thaliana
-
Delker C, Pöschl Y, Raschke A, Ullrich K, Ettingshausen S, Hauptmann V, Grosse I, Quint M (2010) Natural variation of transcriptional auxin response networks in Arabidopsis thaliana. Plant Cell 22: 2184-2200
-
(2010)
Plant Cell
, vol.22
, pp. 2184-2200
-
-
Delker, C.1
Pöschl, Y.2
Raschke, A.3
Ullrich, K.4
Ettingshausen, S.5
Hauptmann, V.6
Grosse, I.7
Quint, M.8
-
16
-
-
58149299846
-
Higher plants use LOV to perceive blue light
-
Demarsy E, Fankhauser C (2009) Higher plants use LOV to perceive blue light. Curr Opin Plant Biol 12: 69-74
-
(2009)
Curr Opin Plant Biol
, vol.12
, pp. 69-74
-
-
Demarsy, E.1
Fankhauser, C.2
-
17
-
-
59849091566
-
The life and death of gene families
-
Demuth JP, Hahn MW (2009) The life and death of gene families. Bioessays 31: 29-39
-
(2009)
Bioessays
, vol.31
, pp. 29-39
-
-
Demuth, J.P.1
Hahn, M.W.2
-
18
-
-
21344458139
-
Plant development is regulated by a family of auxin receptor F box proteins
-
Dharmasiri N, Dharmasiri S, Weijers D, Lechner E, Yamada M, Hobbie L, Ehrismann JS, Jürgens G, Estelle M (2005) Plant development is regulated by a family of auxin receptor F box proteins. Dev Cell 9: 109-119
-
(2005)
Dev Cell
, vol.9
, pp. 109-119
-
-
Dharmasiri, N.1
Dharmasiri, S.2
Weijers, D.3
Lechner, E.4
Yamada, M.5
Hobbie, L.6
Ehrismann, J.S.7
Jürgens, G.8
Estelle, M.9
-
19
-
-
2942633715
-
The Arabidopsis F-box protein SLEEPY1 targets gibberellin signaling repressors for gibberellininduced degradation
-
Dill A, Thomas SG, Hu J, Steber CM, Sun TP (2004) The Arabidopsis F-box protein SLEEPY1 targets gibberellin signaling repressors for gibberellininduced degradation. Plant Cell 16: 1392-1405
-
(2004)
Plant Cell
, vol.16
, pp. 1392-1405
-
-
Dill, A.1
Thomas, S.G.2
Hu, J.3
Steber, C.M.4
Sun, T.P.5
-
20
-
-
33644840995
-
An auxininducible F-box protein CEGENDUO negatively regulates auxin-mediated lateral root formation in Arabidopsis
-
Dong L, Wang L, Zhang Y, Zhang Y, Deng X, Xue Y (2006) An auxininducible F-box protein CEGENDUO negatively regulates auxin-mediated lateral root formation in Arabidopsis. Plant Mol Biol 60: 599-615
-
(2006)
Plant Mol Biol
, vol.60
, pp. 599-615
-
-
Dong, L.1
Wang, L.2
Zhang, Y.3
Zhang, Y.4
Deng, X.5
Xue, Y.6
-
21
-
-
77949497907
-
Depletion of the membraneassociated acyl-coenzyme A-binding protein ACBP1 enhances the ability of cold acclimation in Arabidopsis
-
Du ZY, Xiao S, Chen QF, Chye ML (2010) Depletion of the membraneassociated acyl-coenzyme A-binding protein ACBP1 enhances the ability of cold acclimation in Arabidopsis. Plant Physiol 152: 1585-1597
-
(2010)
Plant Physiol
, vol.152
, pp. 1585-1597
-
-
Du, Z.Y.1
Xiao, S.2
Chen, Q.F.3
Chye, M.L.4
-
22
-
-
0031743421
-
Profile hidden Markov models
-
Eddy SR (1998) Profile hidden Markov models. Bioinformatics 14: 755-763
-
(1998)
Bioinformatics
, vol.14
, pp. 755-763
-
-
Eddy, S.R.1
-
23
-
-
0000122573
-
PHYLIP: Phylogeny Inference Package (version 3.2)
-
Felsenstein J (1989) PHYLIP: Phylogeny Inference Package (version 3.2). Cladistics 5: 164-166
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
24
-
-
24044478137
-
Identification of LOV KELCH PROTEIN2 (LKP2)-interacting factors that can recruit LKP2 to nuclear bodies
-
Fukamatsu Y, Mitsui S, Yasuhara M, Tokioka Y, Ihara N, Fujita S, Kiyosue T (2005) Identification of LOV KELCH PROTEIN2 (LKP2)-interacting factors that can recruit LKP2 to nuclear bodies. Plant Cell Physiol 46: 1340-1349
-
(2005)
Plant Cell Physiol
, vol.46
, pp. 1340-1349
-
-
Fukamatsu, Y.1
Mitsui, S.2
Yasuhara, M.3
Tokioka, Y.4
Ihara, N.5
Fujita, S.6
Kiyosue, T.7
-
25
-
-
0242558716
-
Beta propellers: Structural rigidity and functional diversity
-
Fülöp V, Jones DT (1999) Beta propellers: structural rigidity and functional diversity. Curr Opin Struct Biol 9: 715-721
-
(1999)
Curr Opin Struct Biol
, vol.9
, pp. 715-721
-
-
Fülöp, V.1
Jones, D.T.2
-
26
-
-
0037143725
-
The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis
-
Gagné JM, Downes BP, Shiu SH, Durski AM, Vierstra RD (2002) The F-box subunit of the SCF E3 complex is encoded by a diverse superfamily of genes in Arabidopsis. Proc Natl Acad Sci USA 99: 11519-11524
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 11519-11524
-
-
Gagné, J.M.1
Downes, B.P.2
Shiu, S.H.3
Durski, A.M.4
Vierstra, R.D.5
-
27
-
-
34447120703
-
Hawaiian skirt: An F-box gene that regulates organ fusion and growth in Arabidopsis
-
González-Carranza ZH, Rompa U, Peters JL, Bhatt AM, Wagstaff C, Stead AD, Roberts JA (2007) Hawaiian skirt: an F-box gene that regulates organ fusion and growth in Arabidopsis. Plant Physiol 144: 1370-1382
-
(2007)
Plant Physiol
, vol.144
, pp. 1370-1382
-
-
González-Carranza, Z.H.1
Rompa, U.2
Peters, J.L.3
Bhatt, A.M.4
Wagstaff, C.5
Stead, A.D.6
Roberts, J.A.7
-
28
-
-
71949093707
-
An F-box gene, CPR30, functions as a negative regulator of the defense response in Arabidopsis
-
Gou M, Su N, Zheng J, Huai J, Wu G, Zhao J, He J, Tang D, Yang S, Wang G (2009) An F-box gene, CPR30, functions as a negative regulator of the defense response in Arabidopsis. Plant J 60: 757-770
-
(2009)
Plant J
, vol.60
, pp. 757-770
-
-
Gou, M.1
Su, N.2
Zheng, J.3
Huai, J.4
Wu, G.5
Zhao, J.6
He, J.7
Tang, D.8
Yang, S.9
Wang, G.10
-
29
-
-
0035798406
-
Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure
-
Gough J, Karplus K, Hughey R, Chothia C (2001) Assignment of homology to genome sequences using a library of hidden Markov models that represent all proteins of known structure. J Mol Biol 313: 903-919
-
(2001)
J Mol Biol
, vol.313
, pp. 903-919
-
-
Gough, J.1
Karplus, K.2
Hughey, R.3
Chothia, C.4
-
30
-
-
0347911970
-
Plant responses to ethylene gas are mediated by SCF(EBF1/EBF2)-dependent proteolysis of EIN3 transcription factor
-
Guo H, Ecker JR (2003) Plant responses to ethylene gas are mediated by SCF(EBF1/EBF2)-dependent proteolysis of EIN3 transcription factor. Cell 115: 667-677
-
(2003)
Cell
, vol.115
, pp. 667-677
-
-
Guo, H.1
Ecker, J.R.2
-
31
-
-
6444243196
-
Formation of an SCF(ZTL) complex is required for proper regulation of circadian timing
-
Han L, Mason M, Risseeuw EP, Crosby WL, Somers DE (2004) Formation of an SCF(ZTL) complex is required for proper regulation of circadian timing. Plant J 40: 291-301
-
(2004)
Plant J
, vol.40
, pp. 291-301
-
-
Han, L.1
Mason, M.2
Risseeuw, E.P.3
Crosby, W.L.4
Somers, D.E.5
-
32
-
-
57749085421
-
Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli
-
Hanada K, Zou C, Lehti-Shiu MD, Shinozaki K, Shiu SH (2008) Importance of lineage-specific expansion of plant tandem duplicates in the adaptive response to environmental stimuli. Plant Physiol 148: 993-1003
-
(2008)
Plant Physiol
, vol.148
, pp. 993-1003
-
-
Hanada, K.1
Zou, C.2
Lehti-Shiu, M.D.3
Shinozaki, K.4
Shiu, S.H.5
-
33
-
-
0344232728
-
The F box protein AFR is a positive regulator of phytochrome A-mediated light signaling
-
Harmon FG, Kay SA (2003) The F box protein AFR is a positive regulator of phytochrome A-mediated light signaling. Curr Biol 13: 2091-2096
-
(2003)
Curr Biol
, vol.13
, pp. 2091-2096
-
-
Harmon, F.G.1
Kay, S.A.2
-
34
-
-
0027496935
-
The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases
-
Harper JW, Adami GR, Wei N, Keyomarsi K, Elledge SJ (1993) The p21 Cdk-interacting protein Cip1 is a potent inhibitor of G1 cyclin-dependent kinases. Cell 75: 805-816
-
(1993)
Cell
, vol.75
, pp. 805-816
-
-
Harper, J.W.1
Adami, G.R.2
Wei, N.3
Keyomarsi, K.4
Elledge, S.J.5
-
35
-
-
34247113245
-
F-box proteins: More than baits for the SCF?
-
Hermand D (2006) F-box proteins: more than baits for the SCF? Cell Div 1: 30
-
(2006)
Cell Div
, vol.1
, pp. 30
-
-
Hermand, D.1
-
36
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck JP, Ronquist F (2001) MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
37
-
-
34249819663
-
F-box proteins in rice: Genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress
-
Jain M, Nijhawan A, Arora R, Agarwal P, Ray S, Sharma P, Kapoor S, Tyagi AK, Khurana JP (2007) F-box proteins in rice: genome-wide analysis, classification, temporal and spatial gene expression during panicle and seed development, and regulation by light and abiotic stress. Plant Physiol 143: 1467-1483
-
(2007)
Plant Physiol
, vol.143
, pp. 1467-1483
-
-
Jain, M.1
Nijhawan, A.2
Arora, R.3
Agarwal, P.4
Ray, S.5
Sharma, P.6
Kapoor, S.7
Tyagi, A.K.8
Khurana, J.P.9
-
38
-
-
0030455820
-
Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast
-
James P, Halladay J, Craig EA (1996) Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast. Genetics 144: 1425-1436
-
(1996)
Genetics
, vol.144
, pp. 1425-1436
-
-
James, P.1
Halladay, J.2
Craig, E.A.3
-
39
-
-
0036176679
-
The antigen receptor (NCCRP-1) on catfish and zebrafish nonspecific cytotoxic cells belongs to a new gene family characterized by an F-boxassociated domain
-
Jaso-Friedmann L, Peterson DS, Gonzalez DS, Evans DL (2002) The antigen receptor (NCCRP-1) on catfish and zebrafish nonspecific cytotoxic cells belongs to a new gene family characterized by an F-boxassociated domain. J Mol Evol 54: 386-395
-
(2002)
J Mol Evol
, vol.54
, pp. 386-395
-
-
Jaso-Friedmann, L.1
Peterson, D.S.2
Gonzalez, D.S.3
Evans, D.L.4
-
40
-
-
0036226347
-
Novel sequences propel familiar folds
-
Jawad Z, Paoli M (2002) Novel sequences propel familiar folds. Structure 10: 447-454
-
(2002)
Structure
, vol.10
, pp. 447-454
-
-
Jawad, Z.1
Paoli, M.2
-
41
-
-
7544234937
-
Systematic analysis and nomenclature of mammalian F-box proteins
-
Jin J, Cardozo T, Lovering RC, Elledge SJ, Pagano M, Harper JW (2004) Systematic analysis and nomenclature of mammalian F-box proteins. Genes Dev 18: 2573-2580
-
(2004)
Genes Dev
, vol.18
, pp. 2573-2580
-
-
Jin, J.1
Cardozo, T.2
Lovering, R.C.3
Elledge, S.J.4
Pagano, M.5
Harper, J.W.6
-
42
-
-
0030885968
-
The origin and early evolution of plants on land
-
Kenrick P, Crane PR (1997) The origin and early evolution of plants on land. Nature 389: 33-39
-
(1997)
Nature
, vol.389
, pp. 33-39
-
-
Kenrick, P.1
Crane, P.R.2
-
43
-
-
0036635467
-
Arabidopsis SON1 is an F-box protein that regulates a novel induced defense response independent of both salicylic acid and systemic acquired resistance
-
Kim HS, Delaney TP (2002) Arabidopsis SON1 is an F-box protein that regulates a novel induced defense response independent of both salicylic acid and systemic acquired resistance. Plant Cell 14: 1469-1482
-
(2002)
Plant Cell
, vol.14
, pp. 1469-1482
-
-
Kim, H.S.1
Delaney, T.P.2
-
44
-
-
77953685815
-
An Arabidopsis F-box protein regulates tapetum degeneration and pollen maturation during anther development
-
Kim OK, Jung JH, Park CM (2010) An Arabidopsis F-box protein regulates tapetum degeneration and pollen maturation during anther development. Planta 232: 353-366
-
(2010)
Planta
, vol.232
, pp. 353-366
-
-
Kim, O.K.1
Jung, J.H.2
Park, C.M.3
-
45
-
-
34548813657
-
ZEITLUPE is a circadian photoreceptor stabilized by GIGANTEA in blue light
-
Kim WY, Fujiwara S, Suh SS, Kim J, Kim Y, Han L, David K, Putterill J, Nam HG, Somers DE (2007) ZEITLUPE is a circadian photoreceptor stabilized by GIGANTEA in blue light. Nature 449: 356-360
-
(2007)
Nature
, vol.449
, pp. 356-360
-
-
Kim, W.Y.1
Fujiwara, S.2
Suh, S.S.3
Kim, J.4
Kim, Y.5
Han, L.6
David, K.7
Putterill, J.8
Nam, H.G.9
Somers, D.E.10
-
47
-
-
0024307824
-
Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
-
Kishino H, Hasegawa M (1989) Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J Mol Evol 29: 170-179
-
(1989)
J Mol Evol
, vol.29
, pp. 170-179
-
-
Kishino, H.1
Hasegawa, M.2
-
48
-
-
33749559690
-
F-box proteins everywhere
-
Lechner E, Achard P, Vansiri A, Potuschak T, Genschik P (2006) F-box proteins everywhere. Curr Opin Plant Biol 9: 631-638
-
(2006)
Curr Opin Plant Biol
, vol.9
, pp. 631-638
-
-
Lechner, E.1
Achard, P.2
Vansiri, A.3
Potuschak, T.4
Genschik, P.5
-
49
-
-
12544254338
-
ACBP4 and ACBP5, novel Arabidopsis acyl-CoA-binding proteins with kelch motifs that bind oleoyl-CoA
-
Leung KC, Li HY, Mishra G, Chye ML (2004) ACBP4 and ACBP5, novel Arabidopsis acyl-CoA-binding proteins with kelch motifs that bind oleoyl-CoA. Plant Mol Biol 55: 297-309
-
(2004)
Plant Mol Biol
, vol.55
, pp. 297-309
-
-
Leung, K.C.1
Li, H.Y.2
Mishra, G.3
Chye, M.L.4
-
50
-
-
11144244006
-
Crystal structure of the kelch domain of human Keap1
-
Li X, Zhang D, Hannink M, Beamer LJ (2004) Crystal structure of the kelch domain of human Keap1. J Biol Chem 279: 54750-54758
-
(2004)
J Biol Chem
, vol.279
, pp. 54750-54758
-
-
Li, X.1
Zhang, D.2
Hannink, M.3
Beamer, L.J.4
-
51
-
-
65649117685
-
DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
-
Librado P, Rozas J (2009) DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25: 1451-1452
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
52
-
-
0025509088
-
Growth and development of the axr1 mutants of Arabidopsis
-
Lincoln C, Britton JH, Estelle M (1990) Growth and development of the axr1 mutants of Arabidopsis. Plant Cell 2: 1071-1080
-
(1990)
Plant Cell
, vol.2
, pp. 1071-1080
-
-
Lincoln, C.1
Britton, J.H.2
Estelle, M.3
-
53
-
-
33846036895
-
The e3 ubiquitin ligase gene family in plants: Regulation by degradation
-
Mazzucotelli E, Belloni S, Marone D, De Leonardis A, Guerra D, Di Fonzo N, Cattivelli L, Mastrangelo A (2006) The e3 ubiquitin ligase gene family in plants: regulation by degradation. Curr Genomics 7: 509-522
-
(2006)
Curr Genomics
, vol.7
, pp. 509-522
-
-
Mazzucotelli, E.1
Belloni, S.2
Marone, D.3
De Leonardis, A.4
Guerra, D.5
Di Fonzo, N.6
Cattivelli, L.7
Mastrangelo, A.8
-
54
-
-
1542373671
-
Nuclear protein phosphatases with kelch-repeat domains modulate the response to brassinosteroids in Arabidopsis
-
Mora-García S, Vert G, Yin Y, Caño-Delgado A, Cheong H, Chory J (2004) Nuclear protein phosphatases with kelch-repeat domains modulate the response to brassinosteroids in Arabidopsis. Genes Dev 18: 448-460
-
(2004)
Genes Dev
, vol.18
, pp. 448-460
-
-
Mora-García, S.1
Vert, G.2
Yin, Y.3
Caño-Delgado, A.4
Cheong, H.5
Chory, J.6
-
55
-
-
34547677722
-
Development of series of Gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation
-
Nakagawa T, Kurose T, Hino T, Tanaka K, Kawamukai M, Niwa Y, Toyooka K, Matsuoka K, Jinbo T, Kimura T (2007) Development of series of Gateway binary vectors, pGWBs, for realizing efficient construction of fusion genes for plant transformation. J Biosci Bioeng 104: 34-41
-
(2007)
J Biosci Bioeng
, vol.104
, pp. 34-41
-
-
Nakagawa, T.1
Kurose, T.2
Hino, T.3
Tanaka, K.4
Kawamukai, M.5
Niwa, Y.6
Toyooka, K.7
Matsuoka, K.8
Jinbo, T.9
Kimura, T.10
-
56
-
-
0038015609
-
Control of protein degradation by E3 ubiquitin ligases in Drosophila eye development
-
Ou CY, Pi H, Chien CT (2003) Control of protein degradation by E3 ubiquitin ligases in Drosophila eye development. Trends Genet 19: 382-389
-
(2003)
Trends Genet
, vol.19
, pp. 382-389
-
-
Ou, C.Y.1
Pi, H.2
Chien, C.T.3
-
57
-
-
76049118300
-
Complex regulation of the TIR1/AFB family of auxin receptors
-
Parry G, Calderon-Villalobos LI, Prigge M, Peret B, Dharmasiri S, Itoh H, Lechner E, Gray WM, Bennett M, Estelle M (2009) Complex regulation of the TIR1/AFB family of auxin receptors. Proc Natl Acad Sci USA 106: 22540-22545
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 22540-22545
-
-
Parry, G.1
Calderon-Villalobos, L.I.2
Prigge, M.3
Peret, B.4
Dharmasiri, S.5
Itoh, H.6
Lechner, E.7
Gray, W.M.8
Bennett, M.9
Estelle, M.10
-
58
-
-
2942606074
-
Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals
-
Prag S, Adams JC (2003) Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals. BMC Bioinformatics 4: 42
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 42
-
-
Prag, S.1
Adams, J.C.2
-
59
-
-
61449191658
-
Interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 triggers ethylene responses in Arabidopsis
-
Qiao H, Chang KN, Yazaki J, Ecker JR (2009) Interplay between ethylene, ETP1/ETP2 F-box proteins, and degradation of EIN2 triggers ethylene responses in Arabidopsis. Genes Dev 23: 512-521
-
(2009)
Genes Dev
, vol.23
, pp. 512-521
-
-
Qiao, H.1
Chang, K.N.2
Yazaki, J.3
Ecker, J.R.4
-
60
-
-
0037742392
-
Protein interaction analysis of SCF ubiquitin E3 ligase subunits from Arabidopsis
-
Risseeuw EP, Daskalchuk TE, Banks TW, Liu E, Cotelesage J, Hellmann H, Estelle M, Somers DE, Crosby WL (2003) Protein interaction analysis of SCF ubiquitin E3 ligase subunits from Arabidopsis. Plant J 34: 753-767
-
(2003)
Plant J
, vol.34
, pp. 753-767
-
-
Risseeuw, E.P.1
Daskalchuk, T.E.2
Banks, T.W.3
Liu, E.4
Cotelesage, J.5
Hellmann, H.6
Estelle, M.7
Somers, D.E.8
Crosby, W.L.9
-
61
-
-
0034708444
-
Comparative genomics of the eukaryotes
-
Rubin GM, Yandell MD, Wortman JR, Gabor Miklos GL, Nelson CR, Hariharan IK, Fortini ME, Li PW, Apweiler R, Fleischmann W, et al (2000) Comparative genomics of the eukaryotes. Science 287: 2204-2215
-
(2000)
Science
, vol.287
, pp. 2204-2215
-
-
Rubin, G.M.1
Yandell, M.D.2
Wortman, J.R.3
Gabor Miklos, G.L.4
Nelson, C.R.5
Hariharan, I.K.6
Fortini, M.E.7
Li, P.W.8
Apweiler, R.9
Fleischmann, W.10
-
62
-
-
0031975589
-
The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast grr1p
-
Ruegger M, Dewey E, Gray WM, Hobbie L, Turner J, Estelle M (1998) The TIR1 protein of Arabidopsis functions in auxin response and is related to human SKP2 and yeast grr1p. Genes Dev 12: 198-207
-
(1998)
Genes Dev
, vol.12
, pp. 198-207
-
-
Ruegger, M.1
Dewey, E.2
Gray, W.M.3
Hobbie, L.4
Turner, J.5
Estelle, M.6
-
63
-
-
35348910170
-
FKF1 and GIGANTEA complex formation is required for day-length measurement in Arabidopsis
-
Sawa M, Nusinow DA, Kay SA, Imaizumi T (2007) FKF1 and GIGANTEA complex formation is required for day-length measurement in Arabidopsis. Science 318: 261-265
-
(2007)
Science
, vol.318
, pp. 261-265
-
-
Sawa, M.1
Nusinow, D.A.2
Kay, S.A.3
Imaizumi, T.4
-
64
-
-
16244362244
-
A gene expression map of Arabidopsis thaliana development
-
Schmid M, Davison TS, Henz SR, Pape UJ, Demar M, Vingron M, Schölkopf B, Weigel D, Lohmann JU (2005) A gene expression map of Arabidopsis thaliana development. Nat Genet 37: 501-506
-
(2005)
Nat Genet
, vol.37
, pp. 501-506
-
-
Schmid, M.1
Davison, T.S.2
Henz, S.R.3
Pape, U.J.4
Demar, M.5
Vingron, M.6
Schölkopf, B.7
Weigel, D.8
Lohmann, J.U.9
-
65
-
-
34250675605
-
Characterization of the VIER F-BOX PROTEINE genes from Arabidopsis reveals their importance for plant growth and development
-
Schwager KM, Calderon-Villalobos LIA, Dohmann EMN, Willige BC, Knierer S, Nill C, Schwechheimer C (2007) Characterization of the VIER F-BOX PROTEINE genes from Arabidopsis reveals their importance for plant growth and development. Plant Cell 19: 1163-1178
-
(2007)
Plant Cell
, vol.19
, pp. 1163-1178
-
-
Schwager, K.M.1
Calderon-Villalobos, L.I.A.2
Dohmann, E.M.N.3
Willige, B.C.4
Knierer, S.5
Nill, C.6
Schwechheimer, C.7
-
66
-
-
20244377471
-
Functional annotation of a full-length Arabidopsis cDNA collection
-
Seki M, Narusaka M, Kamiya A, Ishida J, Satou M, Sakurai T, Nakajima M, Enju A, Akiyama K, Oono Y, et al (2002) Functional annotation of a full-length Arabidopsis cDNA collection. Science 296: 141-145
-
(2002)
Science
, vol.296
, pp. 141-145
-
-
Seki, M.1
Narusaka, M.2
Kamiya, A.3
Ishida, J.4
Satou, M.5
Sakurai, T.6
Nakajima, M.7
Enju, A.8
Akiyama, K.9
Oono, Y.10
-
67
-
-
0032766857
-
Multiple comparisons of log-likelihoods with applications to phylogenetic inference
-
Shimodaira H, Hasegawa M (1999)Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol Biol Evol 16: 1114-1116
-
(1999)
Mol Biol Evol
, vol.16
, pp. 1114-1116
-
-
Shimodaira, H.1
Hasegawa, M.2
-
70
-
-
0030925920
-
Pfam: A comprehensive database of protein domain families based on seed alignments
-
Sonnhammer EL, Eddy SR, Durbin R (1997) Pfam: a comprehensive database of protein domain families based on seed alignments. Proteins 28: 405-420
-
(1997)
Proteins
, vol.28
, pp. 405-420
-
-
Sonnhammer, E.L.1
Eddy, S.R.2
Durbin, R.3
-
71
-
-
21244483590
-
EST data suggest that poplar is an ancient polyploid
-
Sterck L, Rombauts S, Jansson S, Sterky F, Rouzé P, Van de Peer Y (2005) EST data suggest that poplar is an ancient polyploid. New Phytol 167: 165-170
-
(2005)
New Phytol
, vol.167
, pp. 165-170
-
-
Sterck, L.1
Rombauts, S.2
Jansson, S.3
Sterky, F.4
Rouzé, P.5
Van de Peer, Y.6
-
72
-
-
35649009346
-
Ubiquitin ligases mediate growth and development by promoting protein death
-
Stone SL, Callis J (2007) Ubiquitin ligases mediate growth and development by promoting protein death. Curr Opin Plant Biol 10: 624-632
-
(2007)
Curr Opin Plant Biol
, vol.10
, pp. 624-632
-
-
Stone, S.L.1
Callis, J.2
-
73
-
-
41049111540
-
Inferring confidence sets of possibly misspecified gene trees
-
Strimmer K, Rambaut A (2002) Inferring confidence sets of possibly misspecified gene trees. Proc Biol Sci 269: 137-142
-
(2002)
Proc Biol Sci
, vol.269
, pp. 137-142
-
-
Strimmer, K.1
Rambaut, A.2
-
74
-
-
67649852552
-
JFK, a kelch domain-containing F-box protein, links the SCF complex to p53 regulation
-
Sun L, Shi L, Li W, Yu W, Liang J, Zhang H, Yang X, Wang Y, Li R, Yao X, et al (2009) JFK, a kelch domain-containing F-box protein, links the SCF complex to p53 regulation. Proc Natl Acad Sci USA 106: 10195-10200
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 10195-10200
-
-
Sun, L.1
Shi, L.2
Li, W.3
Yu, W.4
Liang, J.5
Zhang, H.6
Yang, X.7
Wang, Y.8
Li, R.9
Yao, X.10
-
75
-
-
33747847779
-
PAL2NAL: Robust conversion of protein sequence alignments into the corresponding codon alignments
-
Suyama M, Torrents D, Bork P (2006) PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments. Nucleic Acids Res 34: W609-W612
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Suyama, M.1
Torrents, D.2
Bork, P.3
-
76
-
-
33747876746
-
A putative acyl-CoA-binding protein is a major phloem sap protein in rice (Oryza sativa L.)
-
Suzui N, Nakamura S, Fujiwara T, Hayashi H, Yoneyama T (2006) A putative acyl-CoA-binding protein is a major phloem sap protein in rice (Oryza sativa L.). J Exp Bot 57: 2571-2576
-
(2006)
J Exp Bot
, vol.57
, pp. 2571-2576
-
-
Suzui, N.1
Nakamura, S.2
Fujiwara, T.3
Hayashi, H.4
Yoneyama, T.5
-
77
-
-
33745612095
-
Pvclust: An R package for assessing the uncertainty in hierarchical clustering
-
Suzuki R, Shimodaira H (2006) Pvclust: an R package for assessing the uncertainty in hierarchical clustering. Bioinformatics 22: 1540-1542
-
(2006)
Bioinformatics
, vol.22
, pp. 1540-1542
-
-
Suzuki, R.1
Shimodaira, H.2
-
78
-
-
1042268311
-
Expression and interaction analysis of Arabidopsis Skp1-related genes
-
Takahashi N, Kuroda H, Kuromori T, Hirayama T, Seki M, Shinozaki K, Shimada H, Matsui M (2004) Expression and interaction analysis of Arabidopsis Skp1-related genes. Plant Cell Physiol 45: 83-91
-
(2004)
Plant Cell Physiol
, vol.45
, pp. 83-91
-
-
Takahashi, N.1
Kuroda, H.2
Kuromori, T.3
Hirayama, T.4
Seki, M.5
Shinozaki, K.6
Shimada, H.7
Matsui, M.8
-
79
-
-
33746771082
-
Adaptive evolution in two large families of ubiquitinligase adapters in nematodes and plants
-
Thomas JH (2006) Adaptive evolution in two large families of ubiquitinligase adapters in nematodes and plants. Genome Res 16: 1017-1030
-
(2006)
Genome Res
, vol.16
, pp. 1017-1030
-
-
Thomas, J.H.1
-
81
-
-
22044437388
-
The Botany Array Resource: E-northerns, expression angling, and promoter analyses
-
Toufighi K, Brady SM, Austin R, Ly E, Provart NJ (2005) The Botany Array Resource: e-northerns, expression angling, and promoter analyses. Plant J 43: 153-163
-
(2005)
Plant J
, vol.43
, pp. 153-163
-
-
Toufighi, K.1
Brady, S.M.2
Austin, R.3
Ly, E.4
Provart, N.J.5
-
82
-
-
33748760611
-
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
-
Tuskan GA, Difazio S, Jansson S, Bohlmann J, Grigoriev I, Hellsten U, Putnam N, Ralph S, Rombauts S, Salamov A, et al (2006) The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science 313: 1596-1604
-
(2006)
Science
, vol.313
, pp. 1596-1604
-
-
Tuskan, G.A.1
Difazio, S.2
Jansson, S.3
Bohlmann, J.4
Grigoriev, I.5
Hellsten, U.6
Putnam, N.7
Ralph, S.8
Rombauts, S.9
Salamov, A.10
-
83
-
-
67349254570
-
The ubiquitin-26S proteasome system at the nexus of plant biology
-
Vierstra RD (2009) The ubiquitin-26S proteasome system at the nexus of plant biology. Nat Rev Mol Cell Biol 10: 385-397
-
(2009)
Nat Rev Mol Cell Biol
, vol.10
, pp. 385-397
-
-
Vierstra, R.D.1
-
84
-
-
17744371504
-
Genomewide analysis of S-locus F-box-like genes in Arabidopsis thaliana
-
Wang L, Dong L, Zhang Y, Zhang Y, Wu W, Deng X, Xue Y (2004) Genomewide analysis of S-locus F-box-like genes in Arabidopsis thaliana. Plant Mol Biol 56: 929-945
-
(2004)
Plant Mol Biol
, vol.56
, pp. 929-945
-
-
Wang, L.1
Dong, L.2
Zhang, Y.3
Zhang, Y.4
Wu, W.5
Deng, X.6
Xue, Y.7
-
85
-
-
68249140383
-
The 1001 genomes project for Arabidopsis thaliana
-
Weigel D, Mott R (2009) The 1001 genomes project for Arabidopsis thaliana. Genome Biol 10: 107
-
(2009)
Genome Biol
, vol.10
, pp. 107
-
-
Weigel, D.1
Mott, R.2
-
86
-
-
0034867567
-
ORE9, an F-box protein that regulates leaf senescence in Arabidopsis
-
Woo HR, Chung KM, Park JH, Oh SA, Ahn T, Hong SH, Jang SK, Nam HG (2001) ORE9, an F-box protein that regulates leaf senescence in Arabidopsis. Plant Cell 13: 1779-1790
-
(2001)
Plant Cell
, vol.13
, pp. 1779-1790
-
-
Woo, H.R.1
Chung, K.M.2
Park, J.H.3
Oh, S.A.4
Ahn, T.5
Hong, S.H.6
Jang, S.K.7
Nam, H.G.8
-
87
-
-
58849132032
-
Evolution of F-box genes in plants: Different modes of sequence divergence and their relationships with functional diversification
-
Xu G, Ma H, Nei M, Kong H (2009) Evolution of F-box genes in plants: different modes of sequence divergence and their relationships with functional diversification. Proc Natl Acad Sci USA 106: 835-840
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 835-840
-
-
Xu, G.1
Ma, H.2
Nei, M.3
Kong, H.4
-
88
-
-
0036670233
-
The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis
-
Xu L, Liu F, Lechner E, Genschik P, Crosby WL, Ma H, Peng W, Huang D, Xie D (2002) The SCF(COI1) ubiquitin-ligase complexes are required for jasmonate response in Arabidopsis. Plant Cell 14: 1919-1935
-
(2002)
Plant Cell
, vol.14
, pp. 1919-1935
-
-
Xu, L.1
Liu, F.2
Lechner, E.3
Genschik, P.4
Crosby, W.L.5
Ma, H.6
Peng, W.7
Huang, D.8
Xie, D.9
-
89
-
-
0027403024
-
Kelch encodes a component of intercellular bridges in Drosophila egg chambers
-
Xue F, Cooley L (1993) Kelch encodes a component of intercellular bridges in Drosophila egg chambers. Cell 72: 681-693
-
(1993)
Cell
, vol.72
, pp. 681-693
-
-
Xue, F.1
Cooley, L.2
-
90
-
-
57749114494
-
The F-box gene family is expanded in herbaceous annual plants relative to woody perennial plants
-
Yang X, Kalluri UC, Jawdy S, Gunter LE, Yin T, Tschaplinski TJ, Weston DJ, Ranjan P, Tuskan GA (2008) The F-box gene family is expanded in herbaceous annual plants relative to woody perennial plants. Plant Physiol 148: 1189-1200
-
(2008)
Plant Physiol
, vol.148
, pp. 1189-1200
-
-
Yang, X.1
Kalluri, U.C.2
Jawdy, S.3
Gunter, L.E.4
Yin, T.5
Tschaplinski, T.J.6
Weston, D.J.7
Ranjan, P.8
Tuskan, G.A.9
-
91
-
-
0029160015
-
Protein-protein interactions between human nuclear lamins expressed in yeast
-
Ye Q, Worman HJ (1995) Protein-protein interactions between human nuclear lamins expressed in yeast. Exp Cell Res 219: 292-298
-
(1995)
Exp Cell Res
, vol.219
, pp. 292-298
-
-
Ye, Q.1
Worman, H.J.2
|