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Volumn 36, Issue 1, 2011, Pages 9-22

Sex and circadian modulatory effects on rat liver as assessed by transcriptome analyses

Author keywords

Circadian; Liver; Rats; Sex; Transcriptome

Indexed keywords

AMINO ACID; ANDROGEN; BILE ACID; CYTOCHROME P450; CYTOCHROME P450 2C11; CYTOCHROME P450 2C12; CYTOCHROME P450 2C13; CYTOCHROME P450 3A2; ESTROGEN; FATTY ACID; GLUCOSE; GLUTATHIONE TRANSFERASE; GLUTATHIONE TRANSFERASE YC2; HEPATOCYTE NUCLEAR FACTOR 4ALPHA; LINOLEIC ACID; MYC PROTEIN; RETINOL; STAT5B PROTEIN; SULFOTRANSFERASE; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR ARNTL; TRANSCRIPTION FACTOR SP1; TRANSCRIPTOME; UNCLASSIFIED DRUG; XENOBIOTIC AGENT;

EID: 79551605621     PISSN: 03881350     EISSN: 18803989     Source Type: Journal    
DOI: 10.2131/jts.36.9     Document Type: Article
Times cited : (30)

References (58)
  • 1
    • 1542357569 scopus 로고    scopus 로고
    • Sexual dimorphism of rat liver gene expression: Regulatory role of growth hormone revealed by deoxyribonucleic Acid microarray analysis
    • Ahluwalia, A., Clodfelter, K.H. and Waxman, D.J. (2004): Sexual dimorphism of rat liver gene expression: regulatory role of growth hormone revealed by deoxyribonucleic Acid microarray analysis. Mol. Endocrinol., 18, 747-760.
    • (2004) Mol. Endocrinol. , vol.18 , pp. 747-760
    • Ahluwalia, A.1    Clodfelter, K.H.2    Waxman, D.J.3
  • 2
    • 0032511229 scopus 로고    scopus 로고
    • A serum shock induces circadian gene expression in mammalian tissue culture cells
    • Balsalobre, A., Damiola, F. and Schibler, U. (1998): A serum shock induces circadian gene expression in mammalian tissue culture cells. Cell, 93, 929-937.
    • (1998) Cell , vol.93 , pp. 929-937
    • Balsalobre, A.1    Damiola, F.2    Schibler, U.3
  • 5
    • 58249097066 scopus 로고    scopus 로고
    • The protective role of Per2 against carbon tetrachloride-induced hepatotoxicity
    • Chen, P., Li, C, Pang, W., Zhao, Y., Dong, W., Wang, S. and Zhang, J. (2009): The protective role of Per2 against carbon tetrachloride-induced hepatotoxicity. Am. J. Pathol., 174, 63-70.
    • (2009) Am. J. Pathol. , vol.174 , pp. 63-70
    • Chen, P.1    Li, C.2    Pang, W.3    Zhao, Y.4    Dong, W.5    Wang, S.6    Zhang, J.7
  • 6
    • 34447555674 scopus 로고    scopus 로고
    • Tumor suppression and circadian function
    • Chen-Goodspeed, M. and Lee, C.C. (2007): Tumor suppression and circadian function. J. Biol. Rhythms, 22, 291-298.
    • (2007) J. Biol. Rhythms , vol.22 , pp. 291-298
    • Chen-Goodspeed, M.1    Lee, C.C.2
  • 7
    • 34447528838 scopus 로고    scopus 로고
    • Crosstalk between xenobiotics metabolism and circadian clock
    • DOI 10.1016/j.febslet.2007.04.009, PII S0014579307003821, Cellular Stress
    • Claudel, T., Cretenet, G., Saumet, A. and Gachon, F. (2007): Crosstalk between xenobiotics metabolism and circadian clock. FEBS Lett, 581, 3626-3633. (Pubitemid 47080999)
    • (2007) FEBS Letters , vol.581 , Issue.19 , pp. 3626-3633
    • Claudel, T.1    Cretenet, G.2    Saumet, A.3    Gachon, F.4
  • 8
    • 33744497029 scopus 로고    scopus 로고
    • Sex-dependent liver gene expression is extensive and largely dependent upon signal transducer and activator of transcription 5b (STAT5b): STAT5b-dependent activation of male genes and repression of female genes revealed by microarray analysis
    • Clodfelter, K.H., Holloway, M.G., Hodor, P., Park, S.H., Ray, W.J. and Waxman, D.J. (2006): Sex-dependent liver gene expression is extensive and largely dependent upon signal transducer and activator of transcription 5b (STAT5b): STAT5b-dependent activation of male genes and repression of female genes revealed by microarray analysis. Mol. Endocrinol., 20, 1333-1351.
    • (2006) Mol. Endocrinol. , vol.20 , pp. 1333-1351
    • Clodfelter, K.H.1    Holloway, M.G.2    Hodor, P.3    Park, S.H.4    Ray, W.J.5    Waxman, D.J.6
  • 9
  • 12
    • 33645863768 scopus 로고    scopus 로고
    • Transcriptional regulation of metabolism
    • Desvergne, B., Michalik, L. and Wahli, W. (2006): Transcriptional regulation of metabolism. Physiol. Rev., 86, 465-514.
    • (2006) Physiol. Rev. , vol.86 , pp. 465-514
    • Desvergne, B.1    Michalik, L.2    Wahli, W.3
  • 13
    • 0348112531 scopus 로고    scopus 로고
    • Interpulse growth hormone secretion in the episodic plasma profile causes the sex reversal of cytochrome P450s in senescent male rats
    • Dhir, R.N. and Shapiro, B.H. (2003): Interpulse growth hormone secretion in the episodic plasma profile causes the sex reversal of cytochrome P450s in senescent male rats. Proc. Natl. Acad. Sci. USA, 100, 15224-15228.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 15224-15228
    • Dhir, R.N.1    Shapiro, B.H.2
  • 16
    • 76149141225 scopus 로고    scopus 로고
    • Metabolism and circadian rhythms - Implications for obesity
    • Froy, O. (2010): Metabolism and circadian rhythms - implications for obesity. Endocr. Rev., 31, 1-24.
    • (2010) Endocr. Rev. , vol.31 , pp. 1-24
    • Froy, O.1
  • 17
    • 0033618421 scopus 로고    scopus 로고
    • Daily fluctuation of 7-alkoxycoumarin Odealkylase activities in the liver of male F344 rats under ad libitum-feeding or fasting condition
    • Furukawa, T., Manabe, S., Ohashi, Y., Sharyo, S., Kimura, K. and Mori, Y. (1999a): Daily fluctuation of 7-alkoxycoumarin Odealkylase activities in the liver of male F344 rats under ad libitum-feeding or fasting condition. Toxicol. Lett., 108, 11-16.
    • (1999) Toxicol. Lett. , vol.108 , pp. 11-16
    • Furukawa, T.1    Manabe, S.2    Ohashi, Y.3    Sharyo, S.4    Kimura, K.5    Mori, Y.6
  • 18
    • 0032720479 scopus 로고    scopus 로고
    • Daily fluctuation of hepatic P450 monooxygenase activities in male rats is controlled by the suprachiasmatic nucleus but remains unaffected by adrenal hormones
    • Furukawa, T., Manabe, S., Watanabe, T., Sehata, S., Sharyo, S., Okada, T. and Mori, Y. (1999b): Daily fluctuation of hepatic P450 monooxygenase activities in male rats is controlled by the suprachiasmatic nucleus but remains unaffected by adrenal hormones. Arch. Toxicol., 73, 367-372.
    • (1999) Arch. Toxicol. , vol.73 , pp. 367-372
    • Furukawa, T.1    Manabe, S.2    Watanabe, T.3    Sehata, S.4    Sharyo, S.5    Okada, T.6    Mori, Y.7
  • 19
    • 0033573017 scopus 로고    scopus 로고
    • Sex difference in the daily rhythm of hepatic P450 monooxygenase activities in rats is regulated by growth hormone release
    • Furukawa, T., Manabe, S., Watanabe, T., Sharyo, S. and Mori, Y. (1999c): Sex difference in the daily rhythm of hepatic P450 monooxygenase activities in rats is regulated by growth hormone release. Toxicol. Appl. Pharmacol., 161, 219-224.
    • (1999) Toxicol. Appl. Pharmacol. , vol.161 , pp. 219-224
    • Furukawa, T.1    Manabe, S.2    Watanabe, T.3    Sharyo, S.4    Mori, Y.5
  • 21
    • 34147143580 scopus 로고    scopus 로고
    • Framework for gender differences in human and animal toxicology
    • Gochfeld, M. (2007): Framework for gender differences in human and animal toxicology. Environ. Res., 104, 4-21.
    • (2007) Environ. Res. , vol.104 , pp. 4-21
    • Gochfeld, M.1
  • 22
    • 50249100374 scopus 로고    scopus 로고
    • The meter of metabolism
    • Green, C.B., Takahashi, J.S. and Bass, J. (2008): The meter of metabolism. Cell, 134, 728-742.
    • (2008) Cell , vol.134 , pp. 728-742
    • Green, C.B.1    Takahashi, J.S.2    Bass, J.3
  • 23
    • 33645640531 scopus 로고    scopus 로고
    • Effects of restricted feeding on daily fluctuations of hepatic functions including P450 monooxygenase activities in rats
    • Hirao, J., Arakawa, S., Watanabe, K., Ito, K. and Furukawa, T. (2006): Effects of restricted feeding on daily fluctuations of hepatic functions including P450 monooxygenase activities in rats. J. Biol. Chem., 281, 3165-3171.
    • (2006) J. Biol. Chem. , vol.281 , pp. 3165-3171
    • Hirao, J.1    Arakawa, S.2    Watanabe, K.3    Ito, K.4    Furukawa, T.5
  • 25
    • 43049101096 scopus 로고    scopus 로고
    • Liver-specific hepatocyte nuclear factor-4alpha deficiency: Greater impact on gene expression in male than in female mouse liver
    • Holloway, M.G., Miles, G.D., Dombkowski, AA. and Waxman, D.J. (2008): Liver-specific hepatocyte nuclear factor-4alpha deficiency: greater impact on gene expression in male than in female mouse liver. Mol. Endocrinol., 22, 1274-1286.
    • (2008) Mol. Endocrinol. , vol.22 , pp. 1274-1286
    • Holloway, M.G.1    Miles, G.D.2    Dombkowski, A.A.3    Waxman, D.J.4
  • 26
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang da, W., Sherman, B.T. and Lempicki, R.A. (2009): Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc., 4, 44-57.
    • (2009) Nat. Protoc. , vol.4 , pp. 44-57
    • Huang Da, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 28
    • 34247515224 scopus 로고    scopus 로고
    • Riding tandem: Circadian clocks and the cell cycle
    • Hunt, T. and Sassone-Corsi, P. (2007): Riding tandem: circadian clocks and the cell cycle. Cell, 129, 461-464.
    • (2007) Cell , vol.129 , pp. 461-464
    • Hunt, T.1    Sassone-Corsi, P.2
  • 29
    • 0037067687 scopus 로고    scopus 로고
    • Defective ureagenesis in mice carrying a liver-specific disruption of hepatocyte nuclear factor 4alpha (HNF4alpha). HNF4alpha regulates ornithine transcarbamylase in vivo
    • Inoue, Y., Hayhurst, G.P., Inoue, J., Mori, M. and Gonzalez, F.J. (2002): Defective ureagenesis in mice carrying a liver-specific disruption of hepatocyte nuclear factor 4alpha (HNF4alpha). HNF4alpha regulates ornithine transcarbamylase in vivo. J. Biol. Chem., 277, 25257-25265.
    • (2002) J. Biol. Chem. , vol.277 , pp. 25257-25265
    • Inoue, Y.1    Hayhurst, G.P.2    Inoue, J.3    Mori, M.4    Gonzalez, F.J.5
  • 30
    • 37449004068 scopus 로고    scopus 로고
    • Sexually dimorphic gene expression in mammalian somatic tissue
    • Isensee, J. and Ruiz Noppinger, P. (2007): Sexually dimorphic gene expression in mammalian somatic tissue. Gend. Med., 4, Suppl. B, S75-95.
    • (2007) Gend. Med. , vol.4 , Issue.SUPPL. B
    • Isensee, J.1    Ruiz Noppinger, P.2
  • 32
    • 20444386552 scopus 로고    scopus 로고
    • Gender in the pharmacy: Does it matter?
    • Kaiser, J. (2005): Gender in the pharmacy: does it matter? Science, 308, 1572.
    • (2005) Science , vol.308 , pp. 1572
    • Kaiser, J.1
  • 33
    • 79551595707 scopus 로고    scopus 로고
    • Clock gene mPer2 functions in diurnal variation of acetaminophen induced hepatotoxicity in mice
    • in press
    • Kakan, X., Chen, P. and Zhang, J. (2010): Clock gene mPer2 functions in diurnal variation of acetaminophen induced hepatotoxicity in mice. Exp. Toxicol. Pathol., in press.
    • (2010) Exp. Toxicol. Pathol.
    • Kakan, X.1    Chen, P.2    Zhang, J.3
  • 34
    • 35548972627 scopus 로고    scopus 로고
    • A role for androgens in regulating circadian behavior and the suprachiasmatic nucleus
    • DOI 10.1210/en.2007-0775
    • Karatsoreos, I.N., Wang, A., Sasanian, J. and Silver, R. (2007): A role for androgens in regulating circadian behavior and the suprachiasmatic nucleus. Endocrinology, 148, 5487-5495. (Pubitemid 350012648)
    • (2007) Endocrinology , vol.148 , Issue.11 , pp. 5487-5495
    • Karatsoreos, I.N.1    Wang, A.2    Sasanian, J.3    Silver, R.4
  • 35
    • 0006975858 scopus 로고
    • Influence of sex difference on the pharmacological action and metabolism of some drugs
    • Kato, R., Chiesara, E. and Frontino, G. (1962): Influence of sex difference on the pharmacological action and metabolism of some drugs. Biochem. Pharmacol., 11, 221-227.
    • (1962) Biochem. Pharmacol. , vol.11 , pp. 221-227
    • Kato, R.1    Chiesara, E.2    Frontino, G.3
  • 36
    • 33645519583 scopus 로고    scopus 로고
    • Tumor suppression by the mammalian Period genes
    • Lee, C.C. (2006): Tumor suppression by the mammalian Period genes. Cancer Causes Control, 17, 525-530.
    • (2006) Cancer Causes Control , vol.17 , pp. 525-530
    • Lee, C.C.1
  • 37
    • 54349122613 scopus 로고    scopus 로고
    • Coordinated changes in xenobiotic metabolizing enzyme gene expression in aging male rats
    • Lee, J.S., Ward, W.O., Wolf, D.C., Allen, J.W., Mills, C., DeVito, M.J. and Corton, J.C. (2008): Coordinated changes in xenobiotic metabolizing enzyme gene expression in aging male rats. Toxicol. Sci., 106, 263-283.
    • (2008) Toxicol. Sci. , vol.106 , pp. 263-283
    • Lee, J.S.1    Ward, W.O.2    Wolf, D.C.3    Allen, J.W.4    Mills, C.5    DeVito, M.J.6    Corton, J.C.7
  • 39
    • 0014670327 scopus 로고
    • Resolution of the cytochrome P-450-containing omega-hydroxylation system of liver microsomes into three components
    • Lu, A.Y., Junk, K.W. and Coon, M.J. (1969): Resolution of the cytochrome P-450-containing omega-hydroxylation system of liver microsomes into three components. J. Biol. Chem., 244, 3714-3721.
    • (1969) J. Biol. Chem. , vol.244 , pp. 3714-3721
    • Lu, A.Y.1    Junk, K.W.2    Coon, M.J.3
  • 40
    • 0033655446 scopus 로고    scopus 로고
    • Regulation of glutathione synthesis
    • Lu, S.C. (2009): Regulation of glutathione synthesis. Curr. Top. Cell. Regul., 36, 95-116.
    • (2009) Curr. Top. Cell. Regul. , vol.36 , pp. 95-116
    • Lu, S.C.1
  • 41
    • 0020661998 scopus 로고
    • Biotransformation of coumarin derivatives. (2). Oxidative metabolism of 7-alkoxycoumarin by microsomal enzymes and a simple assay procedure for 7-alkoxycoumarin O-dealkylase
    • Matsubara, T., Otsubo, S., Yoshihara, E. and Touchi, A. (1983): Biotransformation of coumarin derivatives. (2). Oxidative metabolism of 7-alkoxycoumarin by microsomal enzymes and a simple assay procedure for 7-alkoxycoumarin O-dealkylase. Jpn. J. Pharmacol., 33, 41-56.
    • (1983) Jpn. J. Pharmacol. , vol.33 , pp. 41-56
    • Matsubara, T.1    Otsubo, S.2    Yoshihara, E.3    Touchi, A.4
  • 42
    • 70450169816 scopus 로고    scopus 로고
    • Dosing time based on molecular mechanism of biological clock of hepatic drug metabolic enzyme
    • Matsunaga, N. (2009): Dosing time based on molecular mechanism of biological clock of hepatic drug metabolic enzyme. Yakugaku Zasshi, 129, 1357-1365.
    • (2009) Yakugaku Zasshi , vol.129 , pp. 1357-1365
    • Matsunaga, N.1
  • 44
    • 0031948975 scopus 로고    scopus 로고
    • Sex-dependent metabolism of xenobiotics
    • Mugford, C.A. and Kedderis, G.L. (1998): Sex-dependent metabolism of xenobiotics. Drug Metab. Rev., 30, 441-498.
    • (1998) Drug Metab. Rev. , vol.30 , pp. 441-498
    • Mugford, C.A.1    Kedderis, G.L.2
  • 45
    • 0036574916 scopus 로고    scopus 로고
    • Statistical issues with microarrays: Processing and analysis
    • DOI 10.1016/S0168-9525(02)02665-3, PII S0168952502026653
    • Nadon, R. and Shoemaker, J. (2002): Statistical issues with microarrays: processing and analysis. Trends Genet., 18, 265-271. (Pubitemid 34607142)
    • (2002) Trends in Genetics , vol.18 , Issue.5 , pp. 265-271
    • Nadon, R.1    Shoemaker, J.2
  • 47
    • 50449100139 scopus 로고
    • The Carbon Monoxide-Binding Pigment of Liver Microsomes. II. Solubilization, Purification and Properties
    • Omura, T. and Sato, R. (1964): The Carbon Monoxide-Binding Pigment of Liver Microsomes. II. Solubilization, Purification and Properties. J. Biol. Chem., 239, 2379-2385.
    • (1964) J. Biol. Chem. , vol.239 , pp. 2379-2385
    • Omura, T.1    Sato, R.2
  • 48
    • 0025021084 scopus 로고
    • Transplanted suprachiasmatic nucleus determines circadian period
    • Ralph, M.R., Foster, R.G., Davis, F.C. and Menaker, M. (1990): Transplanted suprachiasmatic nucleus determines circadian period. Science, 247, 975-978.
    • (1990) Science , vol.247 , pp. 975-978
    • Ralph, M.R.1    Foster, R.G.2    Davis, F.C.3    Menaker, M.4
  • 49
    • 17644408362 scopus 로고    scopus 로고
    • Sexual dimorphism in mammalian gene expression
    • Rinn, J.L. and Snyder, M. (2005): Sexual dimorphism in mammalian gene expression. Trends Genet., 21, 298-305.
    • (2005) Trends Genet. , vol.21 , pp. 298-305
    • Rinn, J.L.1    Snyder, M.2
  • 50
    • 0018762961 scopus 로고
    • Neural regulation of circadian rhythms
    • Rusak, B. and Zucker, I. (1979): Neural regulation of circadian rhythms. Physiol. Rev., 59, 449-526.
    • (1979) Physiol. Rev. , vol.59 , pp. 449-526
    • Rusak, B.1    Zucker, I.2
  • 51
    • 70450239457 scopus 로고    scopus 로고
    • Metabolism and cancer: The circadian clock connection
    • Sahar, S. and Sassone-Corsi, P. (2009): Metabolism and cancer: the circadian clock connection. Nat. Rev. Cancer, 9, 886-896.
    • (2009) Nat. Rev. Cancer , vol.9 , pp. 886-896
    • Sahar, S.1    Sassone-Corsi, P.2
  • 52
    • 38049148026 scopus 로고    scopus 로고
    • DAVID Knowledgebase: A gene-centered database integrating heterogeneous gene annotation resources to facilitate high- throughput gene functional analysis
    • Sherman, B.T., Huang da, W., Tan, Q., Guo, Y., Bour, S., Liu, D., Stephens, R., Baseler, M.W., Lane, H.C. and Lempicki, R.A. (2007): DAVID Knowledgebase: a gene-centered database integrating heterogeneous gene annotation resources to facilitate high- throughput gene functional analysis. BMC Bioinformatics, 8, 426.
    • (2007) BMC Bioinformatics , vol.8 , pp. 426
    • Sherman, B.T.1    Huang Da, W.2    Tan, Q.3    Guo, Y.4    Bour, S.5    Liu, D.6    Stephens, R.7    Baseler, M.W.8    Lane, H.C.9    Lempicki, R.A.10
  • 53
    • 52149109334 scopus 로고    scopus 로고
    • The genetics of mammalian circadian order and disorder: Implications for physiology and disease
    • Takahashi, J.S., Hong, H.K., Ko, C.H. and McDearmon, E.L. (2008): The genetics of mammalian circadian order and disorder: implications for physiology and disease. Nat. Rev. Genet., 9, 764-775.
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 764-775
    • Takahashi, J.S.1    Hong, H.K.2    Ko, C.H.3    McDearmon, E.L.4
  • 54
    • 53949099155 scopus 로고    scopus 로고
    • Oestrogen receptor alpha and beta immunoreactive cells in the suprachiasmatic nucleus of mice: Distribution, sex differences and regulation by gonadal hormones
    • Vida, B., Hrabovszky, E., Kalamatianos, T., Coen, C.W., Liposits, Z. and Kalló, I. (2008): Oestrogen receptor alpha and beta immunoreactive cells in the suprachiasmatic nucleus of mice: distribution, sex differences and regulation by gonadal hormones. J. Neuroendocrinol., 20, 1270-1277.
    • (2008) J. Neuroendocrinol. , vol.20 , pp. 1270-1277
    • Vida, B.1    Hrabovszky, E.2    Kalamatianos, T.3    Coen, C.W.4    Liposits, Z.5    Kalló, I.6
  • 55
    • 67650841094 scopus 로고    scopus 로고
    • Sex differences in the expression of hepatic drug metabolizing enzymes
    • Waxman, D.J. and Holloway, M.G. (2009): Sex differences in the expression of hepatic drug metabolizing enzymes. Mol. Pharmacol., 76, 215-228.
    • (2009) Mol. Pharmacol. , vol.76 , pp. 215-228
    • Waxman, D.J.1    Holloway, M.G.2
  • 56
    • 39149115688 scopus 로고    scopus 로고
    • Bioinformatics applications for pathway analysis of microarray data
    • Werner, T. (2008): Bioinformatics applications for pathway analysis of microarray data. Curr. Opin. Biotechnol., 19, 50-54.
    • (2008) Curr. Opin. Biotechnol. , vol.19 , pp. 50-54
    • Werner, T.1


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