-
1
-
-
35348895001
-
An avian influenza H5N1 virus that binds to a human-type receptor
-
& other authors
-
Auewarakul, P., Suptawiwat, O., Kongchanagul, A., Sangma, C., Suzuki, Y., Ungchusak, K., Louisirirotchanakul, S., Lerdsamran, H., Pooruk, P. & other authors (2007). An avian influenza H5N1 virus that binds to a human-type receptor. J Virol 81, 9950-9955.
-
(2007)
J Virol
, vol.81
, pp. 9950-9955
-
-
Auewarakul, P.1
Suptawiwat, O.2
Kongchanagul, A.3
Sangma, C.4
Suzuki, Y.5
Ungchusak, K.6
Louisirirotchanakul, S.7
Lerdsamran, H.8
Pooruk, P.9
-
2
-
-
70649103964
-
Characterization of the influenza a H5N1 viruses of the 2008- 09 outbreaks in India reveals a third introduction and possible endemicity
-
other authors
-
Chakrabarti, A. K., Pawar, S. D., Cherian, S. S., Koratkar, S. S., Jadhav, S. M., Pal, B., Raut, S., Thite, V., Kode, S. S. & other authors (2009). Characterization of the influenza A H5N1 viruses of the 2008- 09 outbreaks in India reveals a third introduction and possible endemicity. PLoS ONE 4, e7846.
-
(2009)
PLoS ONE
, vol.4
-
-
Chakrabarti, A.K.1
Pawar, S.D.2
Cherian, S.S.3
Koratkar, S.S.4
Jadhav, S.M.5
Pal, B.6
Raut, S.7
Thite, V.8
Kode, S.S.9
-
3
-
-
36148978940
-
The threat of avian influenza a (H5N1). Part I: Epidemiologic concerns and virulence determinants
-
Cinatl, J., Jr, Michaelis, M. & Doerr, H. W. (2007). The threat of avian influenza A (H5N1). Part I: epidemiologic concerns and virulence determinants. Med Microbiol Immunol (Berl) 196, 181-190.
-
(2007)
Med Microbiol Immunol (Berl)
, vol.196
, pp. 181-190
-
-
Cinatl Jr., J.1
Michaelis, M.2
Doerr, H.W.3
-
4
-
-
67650474076
-
Free energy simulations reveal a double mutant avian H5N1 virus hemagglutinin with altered receptor binding specificity
-
Das, P., Li, J., Royyuru, A. K. & Zhou, R. (2009). Free energy simulations reveal a double mutant avian H5N1 virus hemagglutinin with altered receptor binding specificity. J Comput Chem 30, 1654-1663.
-
(2009)
J Comput Chem
, vol.30
, pp. 1654-1663
-
-
Das, P.1
Li, J.2
Royyuru, A.K.3
Zhou, R.4
-
5
-
-
0032808947
-
The distribution of rates of spontaneous mutation over viruses, prokaryotes, and eukaryotes
-
Drake, J. W. (1999). The distribution of rates of spontaneous mutation over viruses, prokaryotes, and eukaryotes. Ann N Y Acad Sci 870, 100-107.
-
(1999)
Ann N Y Acad Sci
, vol.870
, pp. 100-107
-
-
Drake, J.W.1
-
6
-
-
0027222068
-
Viral quasispecies
-
Eigen, M. (1993). Viral quasispecies. Sci Am 269, 42-49.
-
(1993)
Sci Am
, vol.269
, pp. 42-49
-
-
Eigen, M.1
-
7
-
-
0032981133
-
DNA replication errors produced by the replicative apparatus of Escherichia coli
-
other authors
-
Fujii, S., Akiyama, M., Aoki, K., Sugaya, Y., Higuchi, K., Hiraoka, M., Miki, Y., Saitoh, N., Yoshiyama, K. & other authors (1999). DNA replication errors produced by the replicative apparatus of Escherichia coli. J Mol Biol 289, 835-850.
-
(1999)
J Mol Biol
, vol.289
, pp. 835-850
-
-
Fujii, S.1
Akiyama, M.2
Aoki, K.3
Sugaya, Y.4
Higuchi, K.5
Hiraoka, M.6
Miki, Y.7
Saitoh, N.8
Yoshiyama, K.9
-
8
-
-
0035949581
-
X-ray structures of H5 avian and H9 swine influenza virus hemagglutinins bound to avian and human receptor analogs
-
Ha, Y., Stevens, D. J., Skehel, J. J. & Wiley, D. C. (2001). X-ray structures of H5 avian and H9 swine influenza virus hemagglutinins bound to avian and human receptor analogs. Proc Natl Acad Sci U S A 98, 11181-11186.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 11181-11186
-
-
Ha, Y.1
Stevens, D.J.2
Skehel, J.J.3
Wiley, D.C.4
-
9
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
-
(1999)
Nucleic Acids Symp Ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
10
-
-
70350595871
-
Hemagglutinin receptor binding avidity drives influenza a virus antigenic drift
-
Hensley, S. E., Das, S. R., Bailey, A. L., Schmidt, L. M., Hickman, H. D., Jayaraman, A., Viswanathan, K., Raman, R., Sasisekharan, R. & other authors (2009). Hemagglutinin receptor binding avidity drives influenza A virus antigenic drift. Science 326, 734-736.
-
(2009)
Science
, vol.326
, pp. 734-736
-
-
Hensley, S.E.1
Das, S.R.2
Bailey, A.L.3
Schmidt, L.M.4
Hickman, H.D.5
Jayaraman, A.6
Viswanathan, K.7
Raman, R.8
Sasisekharan, R.9
Authors, O.10
-
11
-
-
77951432232
-
Intrahost evolutionary dynamics of canine influenza virus in naive and partially immune dogs
-
Hoelzer, K., Murcia, P. R., Baillie, G. J., Wood, J. L., Metzger, S. M., Osterrieder, N., Dubovi, E. J., Holmes, E. C. & Parrish, C. R. (2010). Intrahost evolutionary dynamics of canine influenza virus in naive and partially immune dogs. J Virol 84, 5329-5335.
-
(2010)
J Virol
, vol.84
, pp. 5329-5335
-
-
Hoelzer, K.1
Murcia, P.R.2
Baillie, G.J.3
Wood, J.L.4
Metzger, S.M.5
Osterrieder, N.6
Dubovi, E.J.7
Holmes, E.C.8
Parrish, C.R.9
-
12
-
-
70349308777
-
Within-host variation of avian influenza viruses
-
Iqbal, M., Xiao, H., Baillie, G., Warry, A., Essen, S. C., Londt, B., Brookes, S. M., Brown, I. H. & McCauley, J. W. (2009). Within-host variation of avian influenza viruses. Philos Trans R Soc Lond B Biol Sci 364, 2739-2747.
-
(2009)
Philos Trans R Soc Lond B Biol Sci
, vol.364
, pp. 2739-2747
-
-
Iqbal, M.1
Xiao, H.2
Baillie, G.3
Warry, A.4
Essen, S.C.5
Londt, B.6
Brookes, S.M.7
Brown, I.H.8
McCauley, J.W.9
-
13
-
-
71549125259
-
Prediction of avian influenza a binding preference to human receptor using conformational analysis of receptor bound to hemagglutinin
-
Jongkon, N., Mokmak, W., Chuakheaw, D., Shaw, P. J., Tongsima, S. & Sangma, C. (2009). Prediction of avian influenza A binding preference to human receptor using conformational analysis of receptor bound to hemagglutinin. BMC Genomics 10, S24.
-
(2009)
BMC Genomics
, vol.10
-
-
Jongkon, N.1
Mokmak, W.2
Chuakheaw, D.3
Shaw, P.J.4
Tongsima, S.5
Sangma, C.6
-
14
-
-
50549103325
-
Positive selection at the receptor-binding site of haemagglutinin H5 in viral sequences derived from human tissues
-
Kongchanagul, A., Suptawiwat, O., Kanrai, P., Uiprasertkul, M., Puthavathana, P. & Auewarakul, P. (2008). Positive selection at the receptor-binding site of haemagglutinin H5 in viral sequences derived from human tissues. J Gen Virol 89, 1805-1810.
-
(2008)
J Gen Virol
, vol.89
, pp. 1805-1810
-
-
Kongchanagul, A.1
Suptawiwat, O.2
Kanrai, P.3
Uiprasertkul, M.4
Puthavathana, P.5
Auewarakul, P.6
-
15
-
-
33746215063
-
Computational studies of H5N1 hemagglutinin binding with SAα-2,3-Gal and SA-α-2,6-Gal
-
Li, M. & Wang, B. (2006). Computational studies of H5N1 hemagglutinin binding with SAα-2,3-Gal and SA-α-2,6-Gal. Biochem Biophys Res Commun 347, 662-668.
-
(2006)
Biochem Biophys Res Commun
, vol.347
, pp. 662-668
-
-
Li, M.1
Wang, B.2
-
16
-
-
3142579867
-
Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia
-
Li, K. S., Guan, Y., Wang, J., Smith, G. J., Xu, K. M., Duan, L., Rahardjo, A. P., Puthavathana, P., Buranathai, C. & other authors (2004). Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia. Nature 430, 209-213.
-
(2004)
Nature
, vol.430
, pp. 209-213
-
-
Li, K.S.1
Guan, Y.2
Wang, J.3
Smith, G.J.4
Xu, K.M.5
Duan, L.6
Rahardjo, A.P.7
Puthavathana, P.8
Buranathai, C.9
Authors, O.10
-
17
-
-
0032927194
-
The surface glycoproteins of H5 influenza viruses isolated from humans, chickens, and wild aquatic birds have distinguishable properties
-
Matrosovich, M., Zhou, N., Kawaoka, Y. & Webster, R. (1999). The surface glycoproteins of H5 influenza viruses isolated from humans, chickens, and wild aquatic birds have distinguishable properties. J Virol 73, 1146-1155.
-
(1999)
J Virol
, vol.73
, pp. 1146-1155
-
-
Matrosovich, M.1
Zhou, N.2
Kawaoka, Y.3
Webster, R.4
-
18
-
-
77953755568
-
Intraand interhost evolutionary dynamics of equine influenza virus
-
other authors
-
Murcia, P. R., Baillie, G. J., Daly, J., Elton, D., Jervis, C., Mumford, J. A., Newton, R., Parrish, C. R., Hoelzer, K. & other authors (2010). Intraand interhost evolutionary dynamics of equine influenza virus. J Virol 84, 6943-6954.
-
(2010)
J Virol
, vol.84
, pp. 6943-6954
-
-
Murcia, P.R.1
Baillie, G.J.2
Daly, J.3
Elton, D.4
Jervis, C.5
Mumford, J.A.6
Newton, R.7
Parrish, C.R.8
Hoelzer, K.9
-
19
-
-
9444252844
-
Evidence of an absence: The genetic origins of the 1918 pandemic influenza virus
-
Reid, A. H., Taubenberger, J. K. & Fanning, T. G. (2004). Evidence of an absence: the genetic origins of the 1918 pandemic influenza virus. Nat Rev Microbiol 2, 909-914.
-
(2004)
Nat Rev Microbiol
, vol.2
, pp. 909-914
-
-
Reid, A.H.1
Taubenberger, J.K.2
Fanning, T.G.3
-
20
-
-
0024531983
-
Fidelity of two retroviral reverse transcriptases during DNA-dependent DNA synthesis in vitro
-
Roberts, J. D., Preston, B. D., Johnston, L. A., Soni, A., Loeb, L. A. & Kunkel, T. A. (1989). Fidelity of two retroviral reverse transcriptases during DNA-dependent DNA synthesis in vitro. Mol Cell Biol 9, 469-476.
-
(1989)
Mol Cell Biol
, vol.9
, pp. 469-476
-
-
Roberts, J.D.1
Preston, B.D.2
Johnston, L.A.3
Soni, A.4
Loeb, L.A.5
Kunkel, T.A.6
-
21
-
-
0042622380
-
SWISS-MODEL: An automated protein homology-modeling server
-
Schwede, T., Kopp, J., Guex, N. & Peitsch, M. C. (2003). SWISS-MODEL: an automated protein homology-modeling server. Nucleic Acids Res 31, 3381-3385.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3381-3385
-
-
Schwede, T.1
Kopp, J.2
Guex, N.3
Peitsch, M.C.4
-
22
-
-
34547781750
-
MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura, K., Dudley, J., Nei, M. & Kumar, S. (2007). MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24, 1596-1599.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
23
-
-
31344482504
-
1918 influenza: The mother of all pandemics
-
Taubenberger, J. K. & Morens, D. M. (2006). 1918 influenza: the mother of all pandemics. Emerg Infect Dis 12, 15-22.
-
(2006)
Emerg Infect Dis
, vol.12
, pp. 15-22
-
-
Taubenberger, J.K.1
Morens, D.M.2
-
24
-
-
33846820412
-
A two-amino acid change in the hemagglutinin of the 1918 influenza virus abolishes transmission
-
& other authors
-
Tumpey, T. M., Maines, T. R., Van Hoeven, N., Glaser, L., Solorzano, A., Pappas, C., Cox, N. J., Swayne, D. E., Palese, P. & other authors (2007). A two-amino acid change in the hemagglutinin of the 1918 influenza virus abolishes transmission. Science 315, 655-659.
-
(2007)
Science
, vol.315
, pp. 655-659
-
-
Tumpey, T.M.1
Maines, T.R.2
Van Hoeven, N.3
Glaser, L.4
Solorzano, A.5
Pappas, C.6
Cox, N.J.7
Swayne, D.E.8
Palese, P.9
-
25
-
-
34548805887
-
A quantitative genotype algorithm reflecting H5N1 avian influenza niches
-
Wan, X. F., Chen, G., Luo, F., Emch, M. & Donis, R. (2007). A quantitative genotype algorithm reflecting H5N1 avian influenza niches. Bioinformatics 23, 2368-2375.
-
(2007)
Bioinformatics
, vol.23
, pp. 2368-2375
-
-
Wan, X.F.1
Chen, G.2
Luo, F.3
Emch, M.4
Donis, R.5
-
26
-
-
77952969448
-
Crossneutralization of 1918 and 2009 influenza viruses: Role of glycans in viral evolution and vaccine design
-
24ra21
-
Wei, C.-J., Boyington, J. C., Dai, K., Houser, K. V., Pearce, M. B., Kong, W.-P., Yang, Z.-Y., Tumpey, T. M. & Nabel, G. J. (2010). Crossneutralization of 1918 and 2009 influenza viruses: role of glycans in viral evolution and vaccine design. Sci Transl Med 2, 24ra21.
-
(2010)
Sci Transl Med
, vol.2
-
-
Wei, C.-J.1
Boyington, J.C.2
Dai, K.3
Houser, K.V.4
Pearce, M.B.5
Kong, W.-P.6
Yang, Z.-Y.7
Tumpey, T.M.8
Nabel, G.J.9
-
27
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
Yang, Z. (1997). PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci 13, 555-556.
-
(1997)
Comput Appl Biosci
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
28
-
-
16344378246
-
Bayes empirical Bayes inference of amino acid sites under positive selection
-
Yang, Z., Wong, W. S. & Nielsen, R. (2005). Bayes empirical Bayes inference of amino acid sites under positive selection. Mol Biol Evol 22, 1107-1118.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1107-1118
-
-
Yang, Z.1
Wong, W.S.2
Nielsen, R.3
|