Chemical challenges to bacterial AHL signaling in the environment

Chemical Reviews

Volumn 111, Issue 1, 2011, Pages 86-99

  Decho, Alan W ^a   Frey, Rebecca L ^a   Ferry, John L ^a  

^a UNIVERSITY OF SOUTH CAROLINA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACYL CHAIN; BIOLOGICAL MECHANISMS; CHEMICAL ECOLOGY; CHEMICAL MECHANISM; DOUBLE BONDS; EXTRACELLULAR ENVIRONMENTS; MARINE BACTERIUM; STRUCTURAL DIFFERENCES;

BACTERIOLOGY; CHEMICAL BONDS; DEGRADATION; ECOLOGY; SIGNALING;

BACTERIA;

BACTERIAL PROTEIN; GAMMA BUTYROLACTONE DERIVATIVE; LUXS PROTEIN, BACTERIA; LYASE;

ARTICLE; BACTERIUM; CHEMISTRY; METABOLISM; QUORUM SENSING; SIGNAL TRANSDUCTION;

ACYL-BUTYROLACTONES; BACTERIA; BACTERIAL PROTEINS; CARBON-SULFUR LYASES; QUORUM SENSING; SIGNAL TRANSDUCTION;

EID: 78651399310     PISSN: 00092665     EISSN: 15206890     Source Type: Journal    
DOI: 10.1021/cr100311q     Document Type: Article

References (209)

1. Nealson, K. H., Platt, T., and Hastings, J. W. J. Bacteriol. 1970, 104, 313
2. Fuqua, C., Winans, S. C., and Greenberg, E. P. Annu. Rev. Microbiol. 1996, 50, 727
3. Miller, M. B. and Bassler, B. L. Annu. Rev. Microbiol. 2001, 55, 165
4. Straight, P. D. and Kolter, R. Annu. Rev. Microbiol. 2009, 63, 99
5. Pacheco, A. R. and Sperandio, V. Curr. Opin. Microbiol. 2009, 12, 192
6. Tait, A. S., Aucamp, J. P., Bugeon, A., and Hoare, M. Biotechnol. Bioeng. 2009, 104, 321
7. Joint, I., Tait, K., Callow, M. E., Callow, J. A., Milton, D., Williams, P., and Camara, M. Science 2002, 298, 1207
8. Crespi, B. J. Trends Ecol. Evol. 2001, 16, 607
9. Platt, T. G. and Fuqua, C. Trends Microbiol. 2010, 18, 383
10. Whitman, W. B., Coleman, D. C., and Wiebe, W. J. Proc. Natl. Acad. Sci. U.S.A. 1998, 95, 6578
11. Amann, R. I., Ludwig, W., and Schleifer, K. H. Microbiol. Rev. 1995, 59, 143
12. Ward, D. M., Bateson, M. M., Weller, R., and Ruffroberts, A. L. Adv. Microb. Ecol. 1992, 12, 219
13. Cole, J. R., Chai, B., Farris, R. J., Wang, Q., Kulam, S. A., McGarrell, D. M., Garrity, G. M., and Tiedje, J. M. Nucleic Acids Res. 2005, 33, D294
14. Raes, J. and Bork, P. Nature Rev. Microbiol. 2008, 6, 693
15. Ley, R. E., Harris, J. K., Wilcox, J., Spear, J. R., Miller, S. R., Bebout, B. M., Maresca, J. A., Bryant, D. A., Sogin, M. L., and Pace, N. R. Appl. Environ. Microb. 2006, 72, 3685
16. Baumgartner, L. K., Spear, J. R., Buckley, D. H., Pace, N. R., Reid, R. P., Dupraz, C., and Visscher, P. T. Environ. Microbiol. 2009, 11, 2710
17. Cohan, F. M. Annu. Rev. Microbiol. 2002, 56, 457
18. Gevers, D., Cohan, F. M., Lawrence, J. G., Spratt, B. G., Coenye, T., Feil, E. J., Stackebrandt, E., Van de Peer, Y., Vandamme, P., Thompson, F. L., and Swings, J. Nature Rev. Microbiol. 2005, 3, 733
19. Fraser, C., Alm, E. J., Polz, M. F., Spratt, B. G., and Hanage, W. P. Science 2009, 323, 741
20. Visscher, P. T., Reid, R. P., and Bebout, B. M. Geology 2000, 28, 919
21. Decho, A. W. Cont. Shelf Res. 2000, 20, 1257
22. Zhang, L., Ruan, L. F., Hu, C. H., Wu, H. G., Chen, S. W., Yu, Z. N., and Sun, M. Appl. Microbiol. Biotechnol. 2007, 74, 667
23. Chen, C. C., Riadi, L., Suh, S. J., Ohman, D. E., and Ju, L. K. J. Biotechnol. 2005, 117, 1
24. Fuqua, C. and Greenberg, E. P. Nature Rev. Mol. Cell Biol. 2002, 3, 685
25. Kaplan, H. B. and Greenberg, E. P. J. Bacteriol. 1985, 163, 1210
26. Federle, M. J. and Bassler, B. L. J. Clin. Invest. 2003, 112, 1291
27. Waters, C. M. and Bassler, B. L. Annu. Rev. Cell Dev. Biol. 2005, 21, 319
28. Rasmussen, T. B. and Givskov, M. Microbiology (Reading, U.K.) 2006, 152, 895
29. Davies, D. G., Parsek, M. R., Pearson, J. P., Iglewski, B. H., Costerton, J. W., and Greenberg, E. P. Science 1998, 280, 295
30. Dobretsov, S., Teplitski, M., and Paul, V. Biofouling 2009, 25, 413
31. Camilli, A. and Bassler, B. L. Science 2006, 311, 1113
32. Tiaden, A., Spirig, T., and Hilbi, H. Trends Microbiol. 2010, 18, 288
33. Lyon, G. J. and Novick, R. P. Peptides 2004, 25, 1389
34. Horinouchi, S. In In Cell-Cell Signaling in Bacteria; Dunny, G. M. and Winans, S. C., Eds.; ASM Press: Washington, DC, 1999.
35. Schaefer, A. L., Greenberg, E. P., Oliver, C. M., Oda, Y., Huang, J. J., Bittan-Banin, G., Peres, C. M., Schmidt, S., Juhaszova, K., Sufrin, J. R., and Harwood, C. S. Nature 2008, 454, 595
36. Keller, L. and Surette, M. G. Nature Rev. Microbiol. 2006, 4, 249
37. Karatan, E. and Watnick, P. Microbiol. Mol. Biol. Rev. 2009, 73, 310
38. Taga, M. E. and Bassler, B. L. Proc. Natl. Acad. Sci. U.S.A. 2003, 100, 14549
39. Fuqua, W. C., Winans, S. C., and Greenberg, E. P. J. Bacteriol. 1994, 176, 269
40. Fuqua, C., Parsek, M. R., and Greenberg, E. P. Annu. Rev. Genet. 2001, 35, 439
41. Watson, W. T., Minogue, T. D., Val, D. L., von Bodman, S. B., and Churchill, M. E. A. Mol. Cell 2002, 9, 685
42. Chhabra, S. R., Philipp, B., Eberl, L., Givskov, M., Williams, P., and Camara, M. Chem. Pheromones Other Semiochem. 2005, 240, 279
43. Shirtliff, M. E., Mader, J. T., and Camper, A. K. Chem. Biol. 2002, 9, 859
44. Schwartz, T., Walter, S., Marten, S. M., Kirschhofer, F., Nusser, M., and Obst, U. Anal. Bioanal. Chem. 2007, 387, 513
45. Thiel, V., Kunze, B., Verma, P., Wagner-Dobler, I., and Schulz, S. ChemBioChem 2009, 10, 1861
46. Geske, G. D., ONeill, J. C., Miller, D. M., Wezeman, R. J., Mattmann, M. E., Lin, Q., and Blackwell, H. E. ChemBioChem 2008, 9, 389
47. Gantner, S., Schmid, M., Durr, C., Schuhegger, R., Steidle, A., Hutzler, P., Langebartels, C., Eberl, L., Hartmann, A., and Dazzo, F. B. FEMS Microbiol. Ecol. 2006, 56, 188
48. Decho, A. W., Visscher, P. T., Ferry, J., Kawaguchi, T., He, L. J., Przekop, K. M., Norman, R. S., and Reid, R. P. Environ. Microbiol. 2009, 11, 409
49. Pearson, J. P., Van Delden, C., and Iglewski, B. H. J. Bacteriol. 1999, 181, 1203
50. Brogioli, D. and Vailati, A. Phys. Rev. E 2001, 6301
51. Boyer, M. and Wisniewski-Dye, F. FEMS Microbiol. Ecol. 2009, 70, 1
52. Beveridge, T. J. J. Bacteriol. 1999, 181, 4725
53. Schooling, S. R. and Beveridge, T. J. J. Bacteriol. 2006, 188, 5945
54. Mashburn, L. M. and Whiteley, M. Nature 2005, 437, 422
55. Mashburn-Warren, L., Howe, J., Garidel, P., Richter, W., Steiniger, F., Roessle, M., Brandenburg, K., and Whiteley, M. Mol. Microbiol. 2008, 69, 491
56. Kato, N., Morohoshi, T., Nozawa, T., Matsumoto, H., and Ikeda, T. J. Inclusion Phenom. Macrocyclic Chem. 2006, 56, 55
57. Horswill, A. R., Stoodley, P., Stewart, P. S., and Parsek, M. R. Anal. Bioanal. Chem. 2007, 387, 371
58. Visscher, P. T., Hoeft, S. E., Surgeon, T. M., Rogers, D. R., Bebout, B. M., Thompson, J. S., Jr., and Reid, R. P. In American Chemical Society Symposium Series, Vol. 811; Taillefert, M. and Rozan, T., Eds.; Oxford University Press: New York, 2002; p 265.
59. Des Marais, D. J. Biol. Bull. 2003, 204, 160
60. Des Marais, D. J. Science 2000, 289, 1703
61. Jorgensen, B. B. Nature 2001, 412, 286
62. Byers, J. T., Lucas, C., Salmond, G. P. C., and Welch, M. J. Bacteriol. 2002, 184, 1163
63. Yates, E. A., Philipp, B., Buckley, C., Atkinson, S., Chhabra, S. R., Sockett, R. E., Goldner, M., Dessaux, Y., Camara, M., Smith, H., and Williams, P. Infect. Immun. 2002, 70, 5635
64. Hmelo, L. and Van Mooy, B. A. S. Aquat. Microb. Ecol. 2009, 54, 127
65. Frommberger, M., Hertkorn, N., Englmann, M., Jakoby, S., Hartmann, A., Kettrup, A., and Schmitt-Kopplin, P. Electrophoresis 2005, 26, 1523
66. Mabey, W. and Mill, T. J. Phys. Chem. Ref. Data 1978, 7, 383
67. Camara, M., Williams, P., and Hardman, A. Lancet Infect. Dis. 2002, 2, 667
68. Noblet, J. A., Smith, L. A., and Suffet, I. H. J. Agric. Food Chem. 1996, 44, 3685
69. Paggi, R. A., Martone, C. B., Fuqua, C., and De Castro, R. E. FEMS Microbiol. Lett. 2003, 221, 49
70. Sharif, D. I., Gallon, J., Smith, C. J., and Dudley, E. ISME J. 2008, 2, 1171
71. Braun, E. and Bachofen, R. Hydrobiologia 2004, 522, 271
72. Bachofen, R. and Schenk, A. Microbiol. Res. 1998, 153, 61
73. Schwarzenbach, R. P., Gschwend, P. M., and Imboden, D. M. Environmental Organic Chemistry, 2nd ed.; John Wiley & Sons, Inc.: Hoboken, NJ, 2003.
74. Perdue, E. M. and Wolfe, N. L. Environ. Sci. Technol. 1982, 16, 847
75. Visscher, P. T. and Stolz, J. F. Palaeogeogr. Palaeoclimatol. Palaeoecol. 2005, 219, 87
76. Dong, Y. H., Wang, L. H., Xu, J. L., Zhang, H. B., Zhang, X. F., and Zhang, L. H. Nature 2001, 411, 813
77. Dong, Y. H., Xu, J. L., Li, X. Z., and Zhang, L. H. Proc. Natl. Acad. Sci. U.S.A. 2000, 97, 3526
78. Leadbetter, J. R. and Greenberg, E. P. J. Bacteriol. 2000, 182, 6921
79. Lin, Y. H., Xu, J. L., Hu, J. Y., Wang, L. H., Ong, S. L., Leadbetter, J. R., and Zhang, L. H. Mol. Microbiol. 2003, 47, 849
80. Huang, J. J., Han, J. I., Zhang, L. H., and Leadbetter, J. R. Appl. Environ. Microb. 2003, 69, 5941
81. Shepherd, R. W. and Lindow, S. E. Appl. Environ. Microb. 2009, 75, 45
82. Zhang, L. H. Trends Plant Sci. 2003, 8, 238
83. Zhang, L. H. and Dong, Y. H. Mol. Microbiol. 2004, 53, 1563
84. Harrison, J. J., Turner, R. J., and Ceri, H. Environ. Microbiol. 2005, 7, 981
85. Brezonik, P. L. and Fulkerson-Brekken, J. Environ. Sci. Technol. 1998, 32, 3004
86. Draper, W. M. and Crosby, D. G. J. Agric. Food Chem. 1983, 31, 734
87. Duesterberg, C. K., Cooper, W. J., and Waite, T. D. Environ. Sci. Technol. 2005, 39, 5052
88. Faust, B. C. In Handbook of Environmental Chemistry; Boule, P., Ed.; Springer: Berlin, 1999; Vol. 2, Part L.
89. Haag, W. R. and Hoigne, J. Environ. Sci. Technol. 1986, 20, 341
90. Huang, J. P. and Mabury, S. A. Environ. Toxicol. Chem. 2000, 19, 2181
91. Richard, C. and Canonica, S. In Handbook of Environmental Chemistry; Springer: Berlin, 2005; Vol. 2, Part M.
92. Zafiriou, O. C., Joussotdubien, J., Zepp, R. G., and Zika, R. G. Environ. Sci. Technol. 1984, 18, A358
93. Zepp, R. G., Faust, B. C., and Hoigne, J. Environ. Sci. Technol. 1992, 26, 313
94. Zepp, R. G., Hoigne, J., and Bader, H. Environ. Sci. Technol. 1987, 21, 443
95. Glaze, W. H. and Kang, J. W. Ind. Eng. Chem. Res. 1989, 28, 1573
96. Brochardt, S. A., Allain, E. J., Michels, J. J., Stearns, G. W., Kelly, R. F., and McCoy, W. F. Appl. Environ. Microb. 2001, 67, 3174
97. Lebedev, A. T., Shaydullina, G. M., Sinikova, N. A., and Harchevnikova, N. V. Water Res. 2004, 38, 3713
98. Butterfield, P. W., Camper, A. K., Biederman, J. A., and Bargmeyer, A. M. Water Res. 2002, 36, 3898
99. Codony, F., Morato, J., and Mas, J. Water Res. 2005, 39, 1896
100. Mathieu, L., Bouteleux, C., Fass, S., Angel, E., and Block, J. C. Water Res. 2009, 43, 3375
101. Momba, M. N. B. and Binda, M. A. J. Appl. Microbiol. 2002, 92, 641
102. Cui, Y. L., Frey, R. L., Ferry, J. L., and Ferguson, P. L. Rapid Commun. Mass. Spectrom. 2009, 23, 1212
103. Frey, R. L., He, L. J., Cui, Y. L., Decho, A. W., Kawaguchi, T., Ferguson, P. L., and Ferry, J. L. Environ. Sci. Technol. 2010, 44, 7465
104. Michels, J. J., Allain, E. J., Borchardt, S. A., Hu, P. F., and McCoy, W. F. J. Chromatogr., A 2000, 898, 153
105. Zhu, J., Beaber, J. W., More, M. I., Fuqua, C., Eberhard, A., and Winans, S. C. J. Bacteriol. 1998, 180, 5398
106. Givskov, M., DeNys, R., Manefield, M., Gram, L., Maximilien, R., Eberl, L., Molin, S., Steinberg, P. D., and Kjelleberg, S. J. Bacteriol. 1996, 178, 6618
107. Teplitski, M., Chen, H. C., Rajamani, S., Gao, M. S., Merighi, M., Sayre, R. T., Robinson, J. B., Rolfe, B. G., and Bauer, W. D. Plant Physiol. 2004, 134, 137
108. Koch, B., Lijefors, T., Persson, T., Nielsen, J., Kjelleberg, S., and Givskov, M. Microbiology (Reading, U.K.) 2005, 151, 3589
109. Castang, S., Chantegrel, B., Deshayes, C., Dolmazon, R., Gouet, P., Haser, R., Reverchon, S., Nasser, W., Hugouvieux-Cotte-Pattat, N., and Doutheau, A. Bioorg. Med. Chem. Lett. 2004, 14, 5145
110. Geske, G. D., O'Neill, J. C., Miller, D. M., Mattmann, M. E., and Blackwell, H. E. J. Am. Chem. Soc. 2007, 129, 13613
111. McDougald, D., Rice, S. A., and Kjelleberg, S. Anal. Bioanal. Chem. 2007, 387, 445
112. Smith, K. M., Bu, Y. G., and Suga, H. Chem. Biol. 2003, 10, 563
113. Manefield, M., Rasmussen, T. B., Henzter, M., Andersen, J. B., Steinberg, P., Kjelleberg, S., and Givskov, M. Microbiology (U.K.) 2002, 148, 1119
114. Flagan, S., Ching, W. K., and Leadbetter, J. R. Appl. Environ. Microb. 2003, 69, 909
115. Kaufmann, G. F., Sartorio, R., Lee, S. H., Rogers, C. J., Meijler, M. M., Moss, J. A., Clapham, B., Brogan, A. P., Dickerson, T. J., and Janda, K. D. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 309
116. Wang, C. Y., Wang, B. G., Wiryowidagdo, S., Wray, V., van Soest, R., Steube, K. G., Guan, H. S., Proksch, P., and Ebel, R. J. Nat. Prod. 2003, 66, 51
117. Schertzer, J. W., Boulette, M. L., and Whiteley, M. Trends Microbiol. 2009, 17, 189
118. Davies, J., Spiegelman, G. B., and Yim, G. Curr. Opin. Microbiol. 2006, 9, 445
119. Linares, J. F., Gustafsson, I., Baquero, F., and Martinez, J. L. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 19484
120. Cataldi, T. R. I., Bianco, G., Frommberger, M., and Schmitt-Kopplin, P. Rapid Commun. Mass. Spectrom. 2004, 18, 1341
121. Murga, R., Forster, T. S., Brown, E., Pruckler, J. M., Fields, B. S., and Donlan, R. M. Microbiology (U.K.) 2001, 147, 3121
122. Ramesh, A., Lee, D. J., Wang, M. L., Hsu, J. P., Juang, R. S., Hwang, K. J., Liu, J. C., and Tseng, S. J. Sep. Sci. Technol. 2006, 41, 1345
123. Wisniewski-Dye, F. and Downie, J. A. Antonie van Leeuwenhoek 2002, 81, 397
124. Ortori, C. A., Atkinson, S., Chhabra, S. R., Camara, M., Williams, P., and Barrett, D. A. Anal. Bioanal. Chem. 2007, 387, 497
125. Whitehead, N. A., Barnard, A. M. L., Slater, H., Simpson, N. J. L., and Salmond, G. P. C. FEMS Microbiol. Rev. 2001, 25, 365
126. Pappas, K. M., Weingart, C. L., and Winans, S. C. Mol. Microbiol. 2004, 53, 755
127. Nasser, W. and Reverchon, S. Anal. Bioanal. Chem. 2007, 387, 381
128. Collins, C. H., Arnold, F. H., and Leadbetter, J. R. Mol. Microbiol. 2005, 55, 712
129. Hawkins, A. C., Arnold, F. H., Stuermer, R., Hauer, B., and Leadbetter, J. R. Appl. Environ. Microb. 2007, 73, 5775
130. White, C. E. and Winans, S. C. Mol. Microbiol. 2005, 55, 1473
131. Weingart, C. L., White, C. E., Liu, S. P., Chai, Y. R., Cho, H., Tsai, C. S., Wei, Y. P., Delay, N. R., Gronquist, M. R., Eberhard, A., and Winans, S. C. Mol. Microbiol. 2005, 57, 452
132. Van Houdt, R., Aertsen, A., Moons, P., Vanoirbeek, K., and Michiels, C. W. FEMS Microbiol. Lett. 2006, 256, 83
133. Case, R. J., Labbate, M., and Kjelleberg, S. ISME J. 2008, 2, 345
134. Fuqua, C. J. Bacteriol. 2006, 188, 3169
135. Lequette, Y., Lee, J. H., Ledgham, F., Lazdunski, A., and Greenberg, E. P. J. Bacteriol. 2006, 188, 3365
136. Wagner, M., Roger, A. J., Flax, J. L., Brusseau, G. A., and Stahl, D. A. J. Bacteriol. 1998, 180, 2975
137. More, M. I., Finger, L. D., Stryker, J. L., Fuqua, C., Eberhard, A., and Winans, S. C. Science 1996, 272, 1655
138. Fuqua, C. In A. In Cell-Cell Signaling in Bacteria; G. M. Dunny, G. M. and Winans, S. C., Ed.; ASM Press: Washington, DC, 1999; p 211.
139. Lithgow, J. K., Wilkinson, A., Hardman, A., Rodelas, B., Wisniewski-Dye, F., Williams, P., and Downie, J. A. Mol. Microbiol. 2000, 37, 81
140. Horng, Y. T., Deng, S. C., Daykin, M., Soo, P. C., Wei, J. R., Luh, K. T., Ho, S. W., Swift, S., Lai, H. C., and Williams, P. Mol. Microbiol. 2002, 45, 1655
141. Morohoshi, T., Inaba, T., Kato, N., Kanai, K., and Ikeda, T. J. Biosci. Bioeng. 2004, 98, 274
142. Poonguzhali, S., Madhaiyan, M., and Sa, T. Res. Microbiol. 2007, 158, 287
143. Pomini, A. M., Araujo, W. L., and Marsaioli, A. J. J. Chem. Ecol. 2006, 32, 1769
144. Chan, D. I. and Vogel, H. J. Biochem. J. 2010, 430, 559
145. Val, D. L. and Cronan, J. E. J. Bacteriol. 1998, 180, 2644
146. Parsek, M. R., Val, D. L., Hanzelka, B. L., Cronan, J. E., and Greenberg, E. P. Proc. Natl. Acad. Sci. U.S.A. 1999, 96, 4360
147. Rezanka, T. and Sigler, K. Prog. Lipid Res. 2009, 48, 206
148. Kraeutler, B. and Bard, A. J. Nouv. J. Chim. 1979, 3, 31
149. Sedlak, D. L. and Hoigne, J. Atmos. Environ., Part A 1993, 27, 2173
150. Flemming, H. C. and Wingender, J. Nature. Rev. Microbiol. 2010, 8, 623
151. Miller, S. D., Haddock, S. H. D., Elvidge, C. D., and Lee, T. F. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 14181
152. Nealson, K. H. and Hastings, J. W. Appl. Environ. Microb. 2006, 72, 2295
153. Bassler, B. L., Greenberg, E. P., and Stevens, A. M. J. Bacteriol. 1997, 179, 4043
154. Bassler, B. L., Wright, M., Showalter, R. E., and Silverman, M. R. Mol. Microbiol. 1993, 9, 773
155. Ruby, E. G. and Mcfallngai, M. J. J. Bacteriol. 1992, 174, 4865
156. Nealson, K. H. Arch. Microbiol. 1977, 112, 73
157. Stabb, E. V., Butler, M. S., and Adin, D. M. J. Bacteriol. 2004, 186, 2906
158. McLean, R. J. C., Whiteley, M., Stickler, D. J., and Fuqua, W. C. FEMS Microbiol. Lett. 1997, 154, 259
159. Gram, L., Grossart, H. P., Schlingloff, A., and Kiorboe, T. Appl. Environ. Microb. 2002, 68, 4111
160. Brune, A., Frenzel, P., and Cypionka, H. FEMS Microbiol. Rev. 2000, 24, 691
161. Taylor, M. W., Schupp, P. J., Baillie, H. J., Charlton, T. S., de Nys, R., Kjelleberg, S., and Steinberg, P. D. Appl. Environ. Microb. 2004, 70, 4387
162. Wagner-Dobler, I., Thiel, V., Eberl, L., Allgaier, M., Bodor, A., Meyer, S., Ebner, S., Hennig, A., Pukall, R., and Schulz, S. ChemBioChem 2005, 6, 2195
163. Handelsman, J. DNA Cell Biol. 2008, 27, 219
164. Jorgensen, B. B., Revsbech, N. P., and Cohen, Y. Limnol. Oceanogr. 1983, 28, 1075
165. Revsbech, N. P., Jorgensen, B. B., Blackburn, T. H., and Cohen, Y. Limnol. Oceanogr. 1983, 28, 1062
166. Ramsing, N. B., Kuhl, M., and Jorgensen, B. B. Appl. Environ. Microb. 1993, 59, 3840
167. Braun, A. M., Frimmel, F. H., and Hoigne, J. Int. J. Environ. Anal. Chem. 1986, 27, 137
168. Hoigne, J., Bader, H., Haag, W. R., and Staehelin, J. Water Res. 1985, 19, 993
169. Llamas, I., Quesada, E., Martinez-Canovas, M., Gronquist, M., Eberhard, A., and Gonzalez, J. E. Extremophiles 2005, 9, 333
170. Paerl, H. W., Pinckney, J. L., and Steppe, T. F. Environ. Microbiol. 2000, 2, 11
171. Voelkert, E. and Grant, D. R. Anal. Biochem. 1970, 34, 131
172. Branda, S. S., Vik, A., Friedman, L., and Kolter, R. Trends Microbiol. 2005, 13, 20
173. Bockelmann, U., Manz, W., Neu, T. R., and Szewzyk, U. J. Microbiol. Methods 2002, 49, 75
174. Rinaudi, L. V. and Gonzalez, J. E. J. Bacteriol. 2009, 191, 7216
175. Decho, A. W. Oceanogr. Mar. Biol. Annu. Rev. 1990, 28, 73
176. Sutherland, I. W. Trends Microbiol. 2001, 9, 222
177. Marketon, M. M., Glenn, S. A., Eberhard, A., and Gonzalez, J. E. J. Bacteriol. 2003, 185, 325
178. Decho, A. W. Carbohydr. Res. 1999, 315, 330
179. Lawrence, J. R., Swerhone, G. D. W., Kuhlicke, U., and Neu, T. R. Can. J. Microbiol. 2007, 53, 450
180. Decho, A. W. In Microbial Sediments; Riding, R. E. and Awramik, S. M., Eds.; Springer-Verlag, New York, 2000.
181. Boyd, A. and Chakrabarty, A. M. Appl. Environ. Microb. 1994, 60, 2355
182. Kalis, E. J. J., Davis, T. A., Town, R. M., and Van Leeuwen, H. P. Environ. Sci. Technol. 2009, 43, 1091
183. Stewart, P. S. Antimicrob. Agents Chem. 1996, 40, 2517
184. Lawrence, J. R., Wolfaardt, G. M., and Korber, D. R. Appl. Environ. Microb. 1994, 60, 1166
185. Stewart, P. S. J. Bacteriol. 2003, 185, 1485
186. Szomolay, B., Klapper, I., Dockery, J., and Stewart, P. S. Environ. Microbiol. 2005, 7, 1186
187. Rani, S. A., Pitts, B., and Stewart, P. S. Antimicrob. Agents Chem. 2005, 49, 728
188. Sandt, C., Barbeau, J., Gagnon, M. A., and Lafleur, M. J. Antimicrob. Chemother. 2007, 60, 1281
189. Takenaka, S., Pitts, B., Trivedi, H. M., and Stewart, P. S. Appl. Environ. Microb. 2009, 75, 1750
190. Renslow, R. S., Majors, P. D., McLean, J. S., Fredrickson, J. K., Ahmed, B., and Beyenal, H. Biotechnol. Bioeng. 2010, 106, 928
191. Bockelmann, U., Janke, A., Kuhn, R., Neu, T. R., Wecke, J., Lawrence, J. R., and Szewzyk, U. FEMS Microbiol. Lett. 2006, 262, 31
192. Picioreanu, C., van Loosdrecht, M. C. M., and Heijnen, J. J. Biotechnol. Bioeng. 2000, 69, 504
193. Loverdo, C., Benichou, O., Moreau, M., and Voituriez, R. Nature Phys. 2008, 4, 134
194. Nielsen, L. P., Risgaard-Petersen, N., Fossing, H., Christensen, P. B., and Sayama, M. Nature 2010, 463, 1071
195. Redfield, R. J. Trends Microbiol. 2002, 10, 365
196. Hense, B. A., Kuttler, C., Mueller, J., Rothballer, M., Hartmann, A., and Kreft, J. U. Nature Rev. Microbiol. 2007, 5, 230
197. Park, S., Wolanin, P. M., Yuzbashyan, E. A., Silberzan, P., Stock, J. B., and Austin, R. H. Science 2003, 301, 188
198. Alberghini, S., Polone, E., Corich, V., Carlot, M., Seno, F., Trovato, A., and Squartini, A. FEMS Microbiol. Lett. 2009, 292, 149
199. Boedicker, J. Q., Vincent, M. E., and Ismagilov, R. F. Angew. Chem., Int. Ed. 2009, 48, 5908
200. Cho, H. J., Jonsson, H., Campbell, K., Melke, P., Williams, J. W., Jedynak, B., Stevens, A. M., Groisman, A., and Levchenko, A. PloS Biol. 2007, 5, 2614
201. Carnes, E. C., Lopez, D. M., Donegan, N. P., Cheung, A., Gresham, H., Timmins, G. S., and Brinker, C. J. Nature Chem. Biol. 2010, 6, 41
202. Nadell, C. D., Xavier, J. B., Levin, S. A., and Foster, K. R. PloS Biol. 2008, 6, 171
203. Parsek, M. R. and Greenberg, E. P. Trends Microbiol. 2005, 13, 27
204. Xavier, J. B. and Foster, K. R. Proc. Natl. Acad. Sci. U.S.A. 2007, 104, 876
205. Rainey, P. B. and Rainey, K. Nature 2003, 425, 72
206. Diggle, S. P., Griffin, A. S., Campbell, G. S., and West, S. A. Nature 2007, 450, 411
207. Sandoz, K. M., Mitzimberg, S. M., and Schuster, M. Proc. Natl. Acad. Sci. U.S.A. 2007, 104, 15876
208. Brockhurst, M. A., Buckling, A., and Gardner, A. Curr. Biol. 2007, 17, 761
209. Czaran, T. and Hoekstra, R. F. Plos One 2009, 4