-
1
-
-
75549086595
-
REBASE-a database for DNA restriction and modification: Enzymes, genes and genomes
-
Roberts, R. J., Vincze, T., Posfai, J. and Macelis, D. (2010) REBASE-a database for DNA restriction and modification: enzymes, genes and genomes. Nucleic Acids Res., 38, D234-236.
-
(2010)
Nucleic Acids Res.
, vol.38
-
-
Roberts, R.J.1
Vincze, T.2
Posfai, J.3
Macelis, D.4
-
2
-
-
0017130530
-
EcoRI endonuclease. Physical and catalytic properties of the homogenous enzyme
-
Modrich, P. and Zabel, D. (1976) EcoRI endonuclease. Physical and catalytic properties of the homogenous enzyme. J. Biol. Chem., 251, 5866-5874.
-
(1976)
J. Biol. Chem.
, vol.251
, pp. 5866-5874
-
-
Modrich, P.1
Zabel, D.2
-
3
-
-
0018086401
-
A specific endonuclease from Bacillus caldolyticus
-
Bingham, A. H., Atkinson, T., Sciaky, D. and Roberts, R. J. (1978) A specific endonuclease from Bacillus caldolyticus. Nucleic Acids Res., 5, 3457-3467.
-
(1978)
Nucleic Acids Res.
, vol.5
, pp. 3457-3467
-
-
Bingham, A.H.1
Atkinson, T.2
Sciaky, D.3
Roberts, R.J.4
-
4
-
-
0018372034
-
Purification, properties and specificity of the restriction endonuclease from Bacillus stearothermophilus
-
Clarke, C. M. and Hartley, B. S. (1979) Purification, properties and specificity of the restriction endonuclease from Bacillus stearothermophilus. Biochem. J., 177, 49-62.
-
(1979)
Biochem. J.
, vol.177
, pp. 49-62
-
-
Clarke, C.M.1
Hartley, B.S.2
-
5
-
-
0018800329
-
Purification and characterization of the sequence-specific endonuclease BamHI
-
Smith, L. A. and Chirikjian, J. G. (1979) Purification and characterization of the sequence-specific endonuclease BamHI. J. Biol. Chem., 254, 1003-1006.
-
(1979)
J. Biol. Chem.
, vol.254
, pp. 1003-1006
-
-
Smith, L.A.1
Chirikjian, J.G.2
-
6
-
-
0014966111
-
A restriction enzyme from Hemophilus influenzae. II. Base sequence of the recognition site
-
Kelly, T. J. Jr. and Smith, H. O. (1970) A restriction enzyme from Hemophilus influenzae. II. Base sequence of the recognition site. J. Mol. Biol., 51, 393-409.
-
(1970)
J. Mol. Biol.
, vol.51
, pp. 393-409
-
-
Kelly Jr., T.J.1
Smith, H.O.2
-
7
-
-
0025187081
-
Refinement of EcoRI endonuclease crystal structure: A revised protein chain tracing
-
Kim, Y. C., Grable, J. C., Love, R., Greene, P. J. and Rosenberg, J. M. (1990) Refinement of EcoRI endonuclease crystal structure: a revised protein chain tracing. Science, 249, 1307-1309.
-
(1990)
Science
, vol.249
, pp. 1307-1309
-
-
Kim, Y.C.1
Grable, J.C.2
Love, R.3
Greene, P.J.4
Rosenberg, J.M.5
-
8
-
-
0027159254
-
The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments
-
Winkler, F. K., Banner, D. W., Oefner, C., Tsernoglou, D., Brown, R. S., Heathman, S. P., Bryan, R. K., Martin, P. D., Petratos, K. and Wilson, K. S. (1993) The crystal structure of EcoRV endonuclease and of its complexes with cognate and non-cognate DNA fragments. EMBO J., 12, 1781-1795.
-
(1993)
EMBO J.
, vol.12
, pp. 1781-1795
-
-
Winkler, F.K.1
Banner, D.W.2
Oefner, C.3
Tsernoglou, D.4
Brown, R.S.5
Heathman, S.P.6
Bryan, R.K.7
Martin, P.D.8
Petratos, K.9
Wilson, K.S.10
-
9
-
-
0028298842
-
Structure of restriction endonuclease BamHI and its relationship to EcoRI
-
Newman, M., Strzelecka, T., Dorner, L. F., Schildkraut, I. and Aggarwal, A. K. (1994) Structure of restriction endonuclease BamHI and its relationship to EcoRI. Nature, 368, 660-664.
-
(1994)
Nature
, vol.368
, pp. 660-664
-
-
Newman, M.1
Strzelecka, T.2
Dorner, L.F.3
Schildkraut, I.4
Aggarwal, A.K.5
-
10
-
-
0028467168
-
Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV
-
Athanasiadis, A., Vlassi, M., Kotsifaki, D., Tucker, P. A., Wilson, K. S. and Kokkinidis, M. (1994) Crystal structure of PvuII endonuclease reveals extensive structural homologies to EcoRV. Nat. Struct. Biol., 1, 469-475.
-
(1994)
Nat. Struct. Biol.
, vol.1
, pp. 469-475
-
-
Athanasiadis, A.1
Vlassi, M.2
Kotsifaki, D.3
Tucker, P.A.4
Wilson, K.S.5
Kokkinidis, M.6
-
11
-
-
0028024850
-
Structure of PvuII endonuclease with cognate DNA
-
Cheng, X., Balendiran, K., Schildkraut, I. and Anderson, J. E. (1994) Structure of PvuII endonuclease with cognate DNA. EMBO J., 13, 3927-3935.
-
(1994)
EMBO J.
, vol.13
, pp. 3927-3935
-
-
Cheng, X.1
Balendiran, K.2
Schildkraut, I.3
Anderson, J.E.4
-
12
-
-
0033818703
-
Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNA
-
Deibert, M., Grazulis, S., Sasnauskas, G., Siksnys, V. and Huber, R. (2000) Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNA. Nat. Struct. Biol., 7, 792-799.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 792-799
-
-
Deibert, M.1
Grazulis, S.2
Sasnauskas, G.3
Siksnys, V.4
Huber, R.5
-
13
-
-
0017889644
-
Biochemical characterization of the restriction-modification system of Bacillus sphaericus
-
Koncz, C., Kiss, A. and Venetianer, P. (1978) Biochemical characterization of the restriction-modification system of Bacillus sphaericus. Eur. J. Biochem., 89, 523-529.
-
(1978)
Eur. J. Biochem.
, vol.89
, pp. 523-529
-
-
Koncz, C.1
Kiss, A.2
Venetianer, P.3
-
14
-
-
0017516115
-
A new sequence-specific endonuclease (Bsp) from Bacillus sphaericus
-
Kiss, A., Sain, B., Csordas-Toth, E. and Venetianer, P. (1977) A new sequence-specific endonuclease (Bsp) from Bacillus sphaericus. Gene, 1, 323-329.
-
(1977)
Gene
, vol.1
, pp. 323-329
-
-
Kiss, A.1
Sain, B.2
Csordas-Toth, E.3
Venetianer, P.4
-
15
-
-
0018847166
-
Purification and properties of the Bsu endonuclease
-
Bron, S. and Horz, W. (1980) Purification and properties of the Bsu endonuclease. Methods Enzymol., 65, 112-132.
-
(1980)
Methods Enzymol.
, vol.65
, pp. 112-132
-
-
Bron, S.1
Horz, W.2
-
16
-
-
0020061966
-
Isolation and some properties of the restriction endonuclease BcnI from Bacillus centrosporus
-
Petrusyte, M. and Janulaitis, A. (1982) Isolation and some properties of the restriction endonuclease BcnI from Bacillus centrosporus. Eur. J. Biochem., 121, 377-381.
-
(1982)
Eur. J. Biochem.
, vol.121
, pp. 377-381
-
-
Petrusyte, M.1
Janulaitis, A.2
-
17
-
-
0023715961
-
Proteins encoded by the DpnI restriction gene cassette. Hyperproduction and characterization of the DpnI endonuclease
-
de la Campa, A. G., Springhorn, S. S., Kale, P. and Lacks, S. A. (1988) Proteins encoded by the DpnI restriction gene cassette. Hyperproduction and characterization of the DpnI endonuclease. J. Biol. Chem., 263, 14696-14702.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 14696-14702
-
-
De La Campa, A.G.1
Springhorn, S.S.2
Kale, P.3
Lacks, S.A.4
-
18
-
-
0025126596
-
Cloning and nucleotide sequence of the genes coding for the Sau96I restriction and modification enzymes
-
Szilak, L., Venetianer, P. and Kiss, A. (1990) Cloning and nucleotide sequence of the genes coding for the Sau96I restriction and modification enzymes. Nucleic Acids Res., 18, 4659-4664.
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 4659-4664
-
-
Szilak, L.1
Venetianer, P.2
Kiss, A.3
-
19
-
-
0027474435
-
Sequence-specific DNA affinity chromatography: Application of a group-specific adsorbent for the isolation of restriction endonucleases
-
Pozidis, C., Vlatakis, G. and Bouriotis, V. (1993) Sequence-specific DNA affinity chromatography: application of a group-specific adsorbent for the isolation of restriction endonucleases. J. Chromatogr., 630, 151-157.
-
(1993)
J. Chromatogr.
, vol.630
, pp. 151-157
-
-
Pozidis, C.1
Vlatakis, G.2
Bouriotis, V.3
-
20
-
-
4444373591
-
An asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition site
-
Xu, Q. S., Kucera, R. B., Roberts, R. J. and Guo, H. C. (2004) An asymmetric complex of restriction endonuclease MspI on its palindromic DNA recognition site. Structure, 12, 1741-1747.
-
(2004)
Structure
, vol.12
, pp. 1741-1747
-
-
Xu, Q.S.1
Kucera, R.B.2
Roberts, R.J.3
Guo, H.C.4
-
21
-
-
25844458468
-
Two crystal forms of the restriction enzyme MspI-DNA complex show the same novel structure
-
Xu, Q. S., Roberts, R. J. and Guo, H. C. (2005) Two crystal forms of the restriction enzyme MspI-DNA complex show the same novel structure. Protein Sci., 14, 2590-2600.
-
(2005)
Protein Sci.
, vol.14
, pp. 2590-2600
-
-
Xu, Q.S.1
Roberts, R.J.2
Guo, H.C.3
-
22
-
-
17144381324
-
Structure of HinP1I endonuclease reveals a striking similarity to the monomeric restriction enzyme MspI
-
Yang, Z., Horton, J. R., Maunus, R., Wilson, G. G., Roberts, R. J. and Cheng, X. (2005) Structure of HinP1I endonuclease reveals a striking similarity to the monomeric restriction enzyme MspI. Nucleic Acids Res., 33, 1892-1901.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 1892-1901
-
-
Yang, Z.1
Horton, J.R.2
Maunus, R.3
Wilson, G.G.4
Roberts, R.J.5
Cheng, X.6
-
23
-
-
33644851082
-
DNA nicking by HinP1I endonuclease: Bending, base flipping and minor groove expansion
-
Horton, J. R., Zhang, X., Maunus, R., Yang, Z., Wilson, G. G., Roberts, R. J. and Cheng, X. (2006) DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion. Nucleic Acids Res., 34, 939-948.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 939-948
-
-
Horton, J.R.1
Zhang, X.2
Maunus, R.3
Yang, Z.4
Wilson, G.G.5
Roberts, R.J.6
Cheng, X.7
-
24
-
-
34247863978
-
Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically
-
Kaus-Drobek, M., Czapinska, H., Sokolowska, M., Tamulaitis, G., Szczepanowski, R. H., Urbanke, C., Siksnys, V. and Bochtler, M. (2007) Restriction endonuclease MvaI is a monomer that recognizes its target sequence asymmetrically. Nucleic Acids Res., 35, 2035-2046.
-
(2007)
Nucleic Acids Res.
, vol.35
, pp. 2035-2046
-
-
Kaus-Drobek, M.1
Czapinska, H.2
Sokolowska, M.3
Tamulaitis, G.4
Szczepanowski, R.H.5
Urbanke, C.6
Siksnys, V.7
Bochtler, M.8
-
25
-
-
34248153723
-
Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA
-
Sokolowska, M., Kaus-Drobek, M., Czapinska, H., Tamulaitis, G., Szczepanowski, R. H., Urbanke, C., Siksnys, V. and Bochtler, M. (2007) Monomeric restriction endonuclease BcnI in the apo form and in an asymmetric complex with target DNA. J. Mol. Biol., 369, 722-734.
-
(2007)
J. Mol. Biol.
, vol.369
, pp. 722-734
-
-
Sokolowska, M.1
Kaus-Drobek, M.2
Czapinska, H.3
Tamulaitis, G.4
Szczepanowski, R.H.5
Urbanke, C.6
Siksnys, V.7
Bochtler, M.8
-
26
-
-
0018966254
-
Cloning the modification methylase gene of Bacillus sphaericus R in Escherichia coli
-
Szomolanyi, E., Kiss, A. and Venetianer, P. (1980) Cloning the modification methylase gene of Bacillus sphaericus R in Escherichia coli. Gene, 10, 219-225.
-
(1980)
Gene
, vol.10
, pp. 219-225
-
-
Szomolanyi, E.1
Kiss, A.2
Venetianer, P.3
-
27
-
-
34249005168
-
Proposal of Lysinibacillus boronitolerans gen. nov. sp. nov., and transfer of Bacillus fusiformis to Lysinibacillus fusiformis comb. nov. and Bacillus sphaericus to Lysinibacillus sphaericus comb.nov
-
Ahmed, I., Yokota, A., Yamazoe, A. and Fujiwara, T. (2007) Proposal of Lysinibacillus boronitolerans gen. nov. sp. nov., and transfer of Bacillus fusiformis to Lysinibacillus fusiformis comb. nov. and Bacillus sphaericus to Lysinibacillus sphaericus comb.nov. Int. J. Syst. Evol. Microbiol., 57, 1117-1125.
-
(2007)
Int. J. Syst. Evol. Microbiol.
, vol.57
, pp. 1117-1125
-
-
Ahmed, I.1
Yokota, A.2
Yamazoe, A.3
Fujiwara, T.4
-
28
-
-
0004136246
-
-
2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
-
Sambrook, J., Fritsch, E. F. and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
29
-
-
0029018327
-
Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter
-
Guzman, L. M., Belin, D., Carson, M. J. and Beckwith, J. (1995) Tight regulation, modulation, and high-level expression by vectors containing the arabinose PBAD promoter. J. Bacteriol., 177, 4121-4130.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 4121-4130
-
-
Guzman, L.M.1
Belin, D.2
Carson, M.J.3
Beckwith, J.4
-
30
-
-
0028267319
-
Expression vectors for affinity purification and radiolabeling of proteins using Escherichia coli as host
-
Chen, B. P. and Hai, T. (1994) Expression vectors for affinity purification and radiolabeling of proteins using Escherichia coli as host. Gene, 139, 73-75.
-
(1994)
Gene
, vol.139
, pp. 73-75
-
-
Chen, B.P.1
Hai, T.2
-
31
-
-
0026279733
-
Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system
-
Studier, F. W. (1991) Use of bacteriophage T7 lysozyme to improve an inducible T7 expression system. J. Mol. Biol., 219, 37-44.
-
(1991)
J. Mol. Biol.
, vol.219
, pp. 37-44
-
-
Studier, F.W.1
-
32
-
-
0018070851
-
Incompatibility and molecular relationships between small Staphylococcal plasmids carrying the same resistance marker
-
Iordanescu, S., Surdeanu, M., Della Latta, P. and Novick, R. (1978) Incompatibility and molecular relationships between small Staphylococcal plasmids carrying the same resistance marker. Plasmid, 1, 468-479.
-
(1978)
Plasmid
, vol.1
, pp. 468-479
-
-
Iordanescu, S.1
Surdeanu, M.2
Latta, D.P.3
Novick, R.4
-
33
-
-
0020266466
-
Nucleotide sequence and functional map of pC194, a plasmid that specifies inducible chloramphenicol resistance
-
Horinouchi, S. and Weisblum, B. (1982) Nucleotide sequence and functional map of pC194, a plasmid that specifies inducible chloramphenicol resistance. J. Bacteriol., 150, 815-825.
-
(1982)
J. Bacteriol.
, vol.150
, pp. 815-825
-
-
Horinouchi, S.1
Weisblum, B.2
-
34
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli, U. K. (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature, 227, 680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
35
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford, M. M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem., 72, 248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
36
-
-
0020669309
-
High-sensitivity sequencing with a gas-phase sequenator
-
Hunkapiller, M. W., Hewick, R. M., Dreyer, W. J. and Hood, L. E. (1983) High-sensitivity sequencing with a gas-phase sequenator. Methods Enzymol., 91, 399-413.
-
(1983)
Methods Enzymol.
, vol.91
, pp. 399-413
-
-
Hunkapiller, M.W.1
Hewick, R.M.2
Dreyer, W.J.3
Hood, L.E.4
-
37
-
-
0346158179
-
Improved procedures for N-terminal sulfonation of peptides for matrix-assisted laser desorption/ionization post-source decay peptide sequencing
-
Wang, D., Kalb, S. R. and Cotter, R. J. (2004) Improved procedures for N-terminal sulfonation of peptides for matrix-assisted laser desorption/ionization post-source decay peptide sequencing. Rapid Commun. Mass Spectrom., 18, 96-102.
-
(2004)
Rapid Commun. Mass Spectrom.
, vol.18
, pp. 96-102
-
-
Wang, D.1
Kalb, S.R.2
Cotter, R.J.3
-
38
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., Madden, T. L., Schaffer, A. A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D. J. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res., 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
39
-
-
27144489108
-
Protein database searches using compositionally adjusted substitution matrices
-
Altschul, S. F., Wootton, J. C., Gertz, E. M., Agarwala, R., Morgulis, A., Schaffer, A. A. and Yu, Y. K. (2005) Protein database searches using compositionally adjusted substitution matrices. FEBS J., 272, 5101-5109.
-
(2005)
FEBS J.
, vol.272
, pp. 5101-5109
-
-
Altschul, S.F.1
Wootton, J.C.2
Gertz, E.M.3
Agarwala, R.4
Morgulis, A.5
Schaffer, A.A.6
Yu, Y.K.7
-
40
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin, M. A., Blackshields, G., Brown, N. P., Chenna, R., McGettigan, P. A., McWilliam, H., Valentin, F., Wallace, I. M., Wilm, A., Lopez, R. et al. (2007) Clustal W and Clustal X version 2.0. Nucleic Acids Res., 23, 2947-2948.
-
(2007)
Nucleic Acids Res.
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
-
41
-
-
48449106792
-
The Jpred 3 secondary structure prediction server
-
Cole, C., Barber, J. D. and Barton, G. J. (2008) The Jpred 3 secondary structure prediction server. Nucleic Acids Res., 36, W197-W201.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Cole, C.1
Barber, J.D.2
Barton, G.J.3
-
42
-
-
0022429804
-
Base pairing involving deoxyinosine: Implications for probe design
-
Martin, F. H., Castro, M. M., Aboul-ela, F. and Tinoco, I. Jr. (1985) Base pairing involving deoxyinosine: implications for probe design. Nucleic Acids Res., 13, 8927-8938.
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 8927-8938
-
-
Martin, F.H.1
Castro, M.M.2
Aboul-ela, F.3
Tinoco Jr., I.4
-
43
-
-
0021095868
-
Structure of the Bacillus sphaericus R modification methylase gene
-
Posfai, G., Kiss, A., Erdei, S., Posfai, J. and Venetianer, P. (1983) Structure of the Bacillus sphaericus R modification methylase gene. J. Mol. Biol., 170, 597-610.
-
(1983)
J. Mol. Biol.
, vol.170
, pp. 597-610
-
-
Posfai, G.1
Kiss, A.2
Erdei, S.3
Posfai, J.4
Venetianer, P.5
-
44
-
-
57349095233
-
In vivo DNA protection by relaxed-specificity SinI DNA methyltransferase variants
-
Timar, E., Venetianer, P. and Kiss, A. (2008) In vivo DNA protection by relaxed-specificity SinI DNA methyltransferase variants. J. Bacteriol., 190, 8003-8008.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 8003-8008
-
-
Timar, E.1
Venetianer, P.2
Kiss, A.3
-
45
-
-
41949083782
-
Complete genome sequence of the mosquitocidal bacterium Bacillus sphaericus C3-41 and comparison with those of closely related Bacillus species
-
Hu, X., Fan, W., Han, B., Liu, H., Zheng, D., Li, Q., Dong, W., Yan, J., Gao, M., Berry, C. et al. (2008) Complete genome sequence of the mosquitocidal bacterium Bacillus sphaericus C3-41 and comparison with those of closely related Bacillus species. J. Bacteriol., 190, 2892-2902.
-
(2008)
J. Bacteriol.
, vol.190
, pp. 2892-2902
-
-
Hu, X.1
Fan, W.2
Han, B.3
Liu, H.4
Zheng, D.5
Li, Q.6
Dong, W.7
Yan, J.8
Gao, M.9
Berry, C.10
-
46
-
-
0026532777
-
Translation initiation in Escherichia coli: Sequences within the ribosome-binding site
-
Ringquist, S., Shinedling, S., Barrick, D., Green, L., Binkley, J., Stormo, G. D. and Gold, L. (1992) Translation initiation in Escherichia coli: sequences within the ribosome-binding site. Mol. Microbiol., 6, 1219-1229.
-
(1992)
Mol. Microbiol.
, vol.6
, pp. 1219-1229
-
-
Ringquist, S.1
Shinedling, S.2
Barrick, D.3
Green, L.4
Binkley, J.5
Stormo, G.D.6
Gold, L.7
-
47
-
-
46349101158
-
Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses
-
Orlowski, J. and Bujnicki, J. M. (2008) Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses. Nucleic Acids Res., 36, 3552-3569.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 3552-3569
-
-
Orlowski, J.1
Bujnicki, J.M.2
-
48
-
-
34447128115
-
Realm of PD-(D/E) XK nuclease superfamily revisited: Detection of novel families with modified transitive meta profile searches
-
Knizewski, L., Kinch, L., Grishin, N., Rychlewski, L. and Ginalski, K. (2007) Realm of PD-(D/E) XK nuclease superfamily revisited: detection of novel families with modified transitive meta profile searches. BMC Struct. Biol., 7, 40.
-
(2007)
BMC Struct. Biol.
, vol.7
, pp. 40
-
-
Knizewski, L.1
Kinch, L.2
Grishin, N.3
Rychlewski, L.4
Ginalski, K.5
-
49
-
-
0022432413
-
Nucleotide sequence of the BsuRI restriction-modification system
-
Kiss, A., Posfai, G., Keller, C. C., Venetianer, P. and Roberts, R. J. (1985) Nucleotide sequence of the BsuRI restriction-modification system. Nucleic Acids Res., 13, 6403-6421.
-
(1985)
Nucleic Acids Res.
, vol.13
, pp. 6403-6421
-
-
Kiss, A.1
Posfai, G.2
Keller, C.C.3
Venetianer, P.4
Roberts, R.J.5
-
50
-
-
0035827918
-
Cooperative effects by the initiation codon and its flanking regions on translation initiation
-
Stenstrom, C. M., Holmgren, E. and Isaksson, L. A. (2001) Cooperative effects by the initiation codon and its flanking regions on translation initiation. Gene, 273, 259-265.
-
(2001)
Gene
, vol.273
, pp. 259-265
-
-
Stenstrom, C.M.1
Holmgren, E.2
Isaksson, L.A.3
-
51
-
-
43349095997
-
Real-time kinetics of restriction-modification gene expression after entry into a new host cell
-
Mruk, I. and Blumenthal, R. M. (2008) Real-time kinetics of restriction-modification gene expression after entry into a new host cell. Nucleic Acids Res., 36, 2581-2593.
-
(2008)
Nucleic Acids Res.
, vol.36
, pp. 2581-2593
-
-
Mruk, I.1
Blumenthal, R.M.2
-
52
-
-
0020119334
-
The SalGI restriction endonuclease. Purification and properties
-
Maxwell, A. and Halford, S. E. (1982) The SalGI restriction endonuclease. Purification and properties. Biochem. J., 203, 77-84.
-
(1982)
Biochem. J.
, vol.203
, pp. 77-84
-
-
Maxwell, A.1
Halford, S.E.2
-
53
-
-
0031174272
-
Isolation of a strain overproducing endonuclease Eco29kI: Purification and characterization of the homogeneous enzyme
-
Pertzev, A. V., Kravetz, A. N., Mayorov, S. G., Zakharova, M. V. and Solonin, A. S. (1997) Isolation of a strain overproducing endonuclease Eco29kI: purification and characterization of the homogeneous enzyme. Biokhimiia, 62, 732-741.
-
(1997)
Biokhimiia
, vol.62
, pp. 732-741
-
-
Pertzev, A.V.1
Kravetz, A.N.2
Mayorov, S.G.3
Zakharova, M.V.4
Solonin, A.S.5
-
54
-
-
0020119120
-
The SalGI restriction endonuclease. Mechanism of DNA cleavage
-
Maxwell, A. and Halford, S. E. (1982) The SalGI restriction endonuclease. Mechanism of DNA cleavage. Biochem. J., 203, 85-92.
-
(1982)
Biochem. J.
, vol.203
, pp. 85-92
-
-
Maxwell, A.1
Halford, S.E.2
-
55
-
-
61349107249
-
Oligomeric structure diversity within the GIY-YIG nuclease family
-
Ibryashkina, E. M., Sasnauskas, G., Solonin, A. S., Zakharova, M. V. and Siksnys, V. (2009) Oligomeric structure diversity within the GIY-YIG nuclease family. J. Mol. Biol., 387, 10-16.
-
(2009)
J. Mol. Biol.
, vol.387
, pp. 10-16
-
-
Ibryashkina, E.M.1
Sasnauskas, G.2
Solonin, A.S.3
Zakharova, M.V.4
Siksnys, V.5
-
56
-
-
0016823940
-
Restriction and modification of a self-complementary octanucleotide containing the EcoRI substrate
-
Greene, P. J., Poonian, M. S., Nussbaum, A. L., Tobias, L., Garfin, D. E., Boyer, H. W. and Goodman, H. M. (1975) Restriction and modification of a self-complementary octanucleotide containing the EcoRI substrate. J. Mol. Biol., 99, 237-261.
-
(1975)
J. Mol. Biol.
, vol.99
, pp. 237-261
-
-
Greene, P.J.1
Poonian, M.S.2
Nussbaum, A.L.3
Tobias, L.4
Garfin, D.E.5
Boyer, H.W.6
Goodman, H.M.7
-
57
-
-
0024833293
-
Recognition of DNA by Type II restriction enzymes
-
Bennett, S. P. and Halford, S. E. (1989) Recognition of DNA by Type II restriction enzymes. Curr. Top. Cell. Regul., 30, 57-104.
-
(1989)
Curr. Top. Cell. Regul.
, vol.30
, pp. 57-104
-
-
Bennett, S.P.1
Halford, S.E.2
-
58
-
-
0018176045
-
Substrate dependence of the mechanism of EcoRI endonuclease
-
Rubin, R. A. and Modrich, P. (1978) Substrate dependence of the mechanism of EcoRI endonuclease. Nucleic Acids Res., 5, 2991-2997.
-
(1978)
Nucleic Acids Res.
, vol.5
, pp. 2991-2997
-
-
Rubin, R.A.1
Modrich, P.2
-
59
-
-
0018475926
-
The reactions of the EcoRI and other restriction endonucleases
-
Halford, S. E., Johnson, N. P. and Grinsted, J. (1979) The reactions of the EcoRI and other restriction endonucleases. Biochem. J., 179, 353-365.
-
(1979)
Biochem. J.
, vol.179
, pp. 353-365
-
-
Halford, S.E.1
Johnson, N.P.2
Grinsted, J.3
-
60
-
-
0020585395
-
Single turnovers of the EcoRI restriction endonuclease
-
Halford, S. E. and Johnson, N. P. (1983) Single turnovers of the EcoRI restriction endonuclease. Biochem. J., 211, 405-415.
-
(1983)
Biochem. J.
, vol.211
, pp. 405-415
-
-
Halford, S.E.1
Johnson, N.P.2
-
61
-
-
0026722915
-
Characterization of steady state, single-turnover, and binding kinetics of the TaqI restriction endonuclease
-
Zebala, J. A., Choi, J. and Barany, F. (1992) Characterization of steady state, single-turnover, and binding kinetics of the TaqI restriction endonuclease. J. Biol. Chem., 267, 8097-8105.
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 8097-8105
-
-
Zebala, J.A.1
Choi, J.2
Barany, F.3
-
62
-
-
0033616705
-
Plasmid DNA cleavage by MunI restriction enzyme: Single-turnover and steady-state kinetic analysis
-
Sasnauskas, G., Jeltsch, A., Pingoud, A. and Siksnys, V. (1999) Plasmid DNA cleavage by MunI restriction enzyme: single-turnover and steady-state kinetic analysis. Biochemistry, 38, 4028-4036.
-
(1999)
Biochemistry
, vol.38
, pp. 4028-4036
-
-
Sasnauskas, G.1
Jeltsch, A.2
Pingoud, A.3
Siksnys, V.4
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