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Volumn 36, Issue 8, 2008, Pages 2581-2593

Real-time kinetics of restriction-modification gene expression after entry into a new host cell

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; RNA METHYLTRANSFERASE; TYPE II SITE SPECIFIC DEOXYRIBONUCLEASE;

EID: 43349095997     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkn097     Document Type: Article
Times cited : (45)

References (84)
  • 1
    • 33846078626 scopus 로고    scopus 로고
    • REBASE-enzymes and genes for DNA restriction and modification
    • Roberts,R.J., Vincze,T., Posfai,J. and Macelis,D. (2007) REBASE-enzymes and genes for DNA restriction and modification. Nucleic Acids Res. 35, D269-D270.
    • (2007) Nucleic Acids Res , vol.35
    • Roberts, R.J.1    Vincze, T.2    Posfai, J.3    Macelis, D.4
  • 2
    • 0036146923 scopus 로고    scopus 로고
    • 2001 Fred Griffith review lecture. Immigration control of DNA in bacteria: Self versus non-self
    • Murray,N.E. (2002) 2001 Fred Griffith review lecture. Immigration control of DNA in bacteria: Self versus non-self. Microbiology, 148, 3-20.
    • (2002) Microbiology , vol.148 , pp. 3-20
    • Murray, N.E.1
  • 3
    • 0029940857 scopus 로고    scopus 로고
    • Horizontal gene transfer contributes to the wide distribution and evolution of type II restriction-modification systems
    • Jeltsch,A. and Pingoud,A. (1996) Horizontal gene transfer contributes to the wide distribution and evolution of type II restriction-modification systems. J. Mol. Evol., 42, 91-96.
    • (1996) J. Mol. Evol , vol.42 , pp. 91-96
    • Jeltsch, A.1    Pingoud, A.2
  • 4
    • 0022376069 scopus 로고
    • Cloning of a restriction-modification system from Proteus vulgaris and its use in analyzing a methylase-sensitive phenotype in Escherichia coli
    • Blumenthal,R.M., Gregory,S.A. and Cooperider,J.S. (1985) Cloning of a restriction-modification system from Proteus vulgaris and its use in analyzing a methylase-sensitive phenotype in Escherichia coli. J. Bacteriol., 164, 501-509.
    • (1985) J. Bacteriol , vol.164 , pp. 501-509
    • Blumenthal, R.M.1    Gregory, S.A.2    Cooperider, J.S.3
  • 5
    • 34948863873 scopus 로고    scopus 로고
    • Negative regulation of EcoRI restriction enzyme gene associated with intragenic reverse promoters
    • Liu,Y. and Kobayashi,I. (2007) Negative regulation of EcoRI restriction enzyme gene associated with intragenic reverse promoters. J. Bacteriol., 189, 6928-6935.
    • (2007) J. Bacteriol , vol.189 , pp. 6928-6935
    • Liu, Y.1    Kobayashi, I.2
  • 6
    • 34548042075 scopus 로고    scopus 로고
    • Regulation of the EcoRI restriction-modification system: Identification of ecoRIM gene promoters and their upstream negative regulators in the ecoRIR gene
    • Liu,Y., Ichige,A. and Kobayashi,I. (2007) Regulation of the EcoRI restriction-modification system: Identification of ecoRIM gene promoters and their upstream negative regulators in the ecoRIR gene. Gene., 400, 140-149.
    • (2007) Gene , vol.400 , pp. 140-149
    • Liu, Y.1    Ichige, A.2    Kobayashi, I.3
  • 7
    • 0028641158 scopus 로고
    • Regulation of EcoRII methyltransferase: Effect of mutations on gene expression and in vitro binding to the promoter region
    • Som,S. and Friedman,S. (1994) Regulation of EcoRII methyltransferase: effect of mutations on gene expression and in vitro binding to the promoter region. Nucleic Acids Res., 22, 5347-5353.
    • (1994) Nucleic Acids Res , vol.22 , pp. 5347-5353
    • Som, S.1    Friedman, S.2
  • 8
    • 0027210638 scopus 로고
    • Complex transcription of an operon encoding the SalI restriction-modification system of Streptomyces albus G
    • Alvarez,M.A., Chater,K.F. and Rodicio,M.R. (1993) Complex transcription of an operon encoding the SalI restriction-modification system of Streptomyces albus G. Mol. Microbiol., 8, 243-252.
    • (1993) Mol. Microbiol , vol.8 , pp. 243-252
    • Alvarez, M.A.1    Chater, K.F.2    Rodicio, M.R.3
  • 9
    • 0026633116 scopus 로고
    • Sequence and characterization of pvuIIR, the PvuII endonuclease gene, and of pvuIIC, its regulatory gene
    • Tao,T. and Blumenthal,R.M. (1992) Sequence and characterization of pvuIIR, the PvuII endonuclease gene, and of pvuIIC, its regulatory gene. J. Bacteriol., 174, 3395-3398.
    • (1992) J. Bacteriol , vol.174 , pp. 3395-3398
    • Tao, T.1    Blumenthal, R.M.2
  • 10
    • 0028865833 scopus 로고
    • The regulatory C proteins from different restriction-modification systems can cross-complement
    • Ives,C.L., Sohail,A. and Brooks,J.E. (1995) The regulatory C proteins from different restriction-modification systems can cross-complement. J. Bacteriol., 177, 6313-6315.
    • (1995) J. Bacteriol , vol.177 , pp. 6313-6315
    • Ives, C.L.1    Sohail, A.2    Brooks, J.E.3
  • 11
    • 28844494799 scopus 로고    scopus 로고
    • Crystal structure of the restriction-modification system control element C.BclI and mapping of its binding site
    • Sawaya,M.R., Zhu,Z., Mersha,F., Chan,S.H., Dabur,R., Xu,S.Y. and Balendiran,G.K. (2005) Crystal structure of the restriction-modification system control element C.BclI and mapping of its binding site. Structure, 13, 1837-1847.
    • (2005) Structure , vol.13 , pp. 1837-1847
    • Sawaya, M.R.1    Zhu, Z.2    Mersha, F.3    Chan, S.H.4    Dabur, R.5    Xu, S.Y.6    Balendiran, G.K.7
  • 12
    • 0030615227 scopus 로고    scopus 로고
    • Cloning and characterization of the BglII restriction-modification system reveals a possible evolutionary footprint
    • Anton,B.P., Heiter,D.F., Benner,J.S., Hess,E.J., Greenough,L., Moran,L.S., Slatko,B.E. and Brooks,J.E. (1997) Cloning and characterization of the BglII restriction-modification system reveals a possible evolutionary footprint. Gene, 187, 19-27.
    • (1997) Gene , vol.187 , pp. 19-27
    • Anton, B.P.1    Heiter, D.F.2    Benner, J.S.3    Hess, E.J.4    Greenough, L.5    Moran, L.S.6    Slatko, B.E.7    Brooks, J.E.8
  • 13
    • 0037437368 scopus 로고    scopus 로고
    • Esp1396I restriction-modification system: Structural organization and mode of regulation
    • Cesnaviciene,E., Mitkaite,G., Stankevicius,K., Janulaitis,A. and Lubys,A. (2003) Esp1396I restriction-modification system: Structural organization and mode of regulation. Nucleic Acids Res., 31, 743-749.
    • (2003) Nucleic Acids Res , vol.31 , pp. 743-749
    • Cesnaviciene, E.1    Mitkaite, G.2    Stankevicius, K.3    Janulaitis, A.4    Lubys, A.5
  • 14
    • 0037101805 scopus 로고    scopus 로고
    • C.EcoO109I, a regulatory protein for production of EcoO109I restriction endonuclease, specifically binds to and bends DNA upstream of its translational start site
    • Kita,K., Tsuda,J. and Nakai,S.Y. (2002) C.EcoO109I, a regulatory protein for production of EcoO109I restriction endonuclease, specifically binds to and bends DNA upstream of its translational start site. Nucleic Acids Res., 30, 3558-3565.
    • (2002) Nucleic Acids Res , vol.30 , pp. 3558-3565
    • Kita, K.1    Tsuda, J.2    Nakai, S.Y.3
  • 16
    • 0029030933 scopus 로고
    • The eco72IC gene specifies a trans-acting factor which influences expression of both DNA methyltransferase and endonuclease from the Eco72I restriction-modification system
    • Rimseliene,R., Vaisvila,R. and Janulaitis,A. (1995) The eco72IC gene specifies a trans-acting factor which influences expression of both DNA methyltransferase and endonuclease from the Eco72I restriction-modification system. Gene, 157, 217-219.
    • (1995) Gene , vol.157 , pp. 217-219
    • Rimseliene, R.1    Vaisvila, R.2    Janulaitis, A.3
  • 17
    • 0029013490 scopus 로고
    • Organization and gene expression within restriction-modification systems of Herpetosiphon giganteus
    • Kroger,M., Blum,E., Deppe,E., Dusterhoft,A., Erdmann,D., Kilz,S., Meyer-Rogge,S. and Mostl,D. (1995) Organization and gene expression within restriction-modification systems of Herpetosiphon giganteus. Gene, 157, 43-47.
    • (1995) Gene , vol.157 , pp. 43-47
    • Kroger, M.1    Blum, E.2    Deppe, E.3    Dusterhoft, A.4    Erdmann, D.5    Kilz, S.6    Meyer-Rogge, S.7    Mostl, D.8
  • 18
    • 0343415133 scopus 로고    scopus 로고
    • Nucleotide sequence of the gene encoding the BstLVI DNA methyltransferase: Comparison with other amino-DNA methyltransferases
    • Vasquez,C.C., Saavedra,C.P. and Pichuantes,S.E. (2000) Nucleotide sequence of the gene encoding the BstLVI DNA methyltransferase: comparison with other amino-DNA methyltransferases. Curr. Microbiol. 40, 114-118.
    • (2000) Curr. Microbiol , vol.40 , pp. 114-118
    • Vasquez, C.C.1    Saavedra, C.P.2    Pichuantes, S.E.3
  • 19
    • 0033231412 scopus 로고    scopus 로고
    • Structural organization and regulation of the plasmid-borne type II restriction-modification system Kpn2I from Klebsiella pneumoniae RFL2
    • Lubys,A., Jurenaite,S. and Janulaitis,A. (1999) Structural organization and regulation of the plasmid-borne type II restriction-modification system Kpn2I from Klebsiella pneumoniae RFL2. Nucleic Acids Res., 27, 4228-4234.
    • (1999) Nucleic Acids Res , vol.27 , pp. 4228-4234
    • Lubys, A.1    Jurenaite, S.2    Janulaitis, A.3
  • 20
    • 0024850487 scopus 로고
    • Cloning, characterization and heterologous expression of the SmaI restriction-modification system
    • Heidmann,S., Seifert,W., Kessler,C. and Domdey,H. (1989) Cloning, characterization and heterologous expression of the SmaI restriction-modification system. Nucleic Acids Res., 17, 9783-9796.
    • (1989) Nucleic Acids Res , vol.17 , pp. 9783-9796
    • Heidmann, S.1    Seifert, W.2    Kessler, C.3    Domdey, H.4
  • 21
    • 33646105382 scopus 로고    scopus 로고
    • Cooperative binding of the C.AhdI controller protein to the C/R promoter and its role in endonuclease gene expression
    • McGeehan,J.E., Papapanagiotou,I., Streeter,S.D. and Kneale,G.G. (2006) Cooperative binding of the C.AhdI controller protein to the C/R promoter and its role in endonuclease gene expression. J. Mol. Biol., 358, 523-531.
    • (2006) J. Mol. Biol , vol.358 , pp. 523-531
    • McGeehan, J.E.1    Papapanagiotou, I.2    Streeter, S.D.3    Kneale, G.G.4
  • 22
    • 0026087311 scopus 로고
    • A family of regulatory genes associated with type II restriction-modification systems
    • Tao,T., Bourne,J.C. and Blumenthal,R.M. (1991) A family of regulatory genes associated with type II restriction-modification systems. J. Bacteriol., 173, 1367-1375.
    • (1991) J. Bacteriol , vol.173 , pp. 1367-1375
    • Tao, T.1    Bourne, J.C.2    Blumenthal, R.M.3
  • 23
    • 13844281073 scopus 로고    scopus 로고
    • High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila
    • McGeehan,J.E., Streeter,S.D., Papapanagiotou,I., Fox,G.C. and Kneale,G.G. (2005) High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila. J. Mol. Biol., 346, 689-701.
    • (2005) J. Mol. Biol , vol.346 , pp. 689-701
    • McGeehan, J.E.1    Streeter, S.D.2    Papapanagiotou, I.3    Fox, G.C.4    Kneale, G.G.5
  • 24
    • 11844250013 scopus 로고    scopus 로고
    • Nature of the promoter activated by C.PvuII, an unusual regulatory protein conserved among restriction-modification systems
    • Knowle,D., Lintner,R.E., Touma,Y.M. and Blumenthal,R.M. (2005) Nature of the promoter activated by C.PvuII, an unusual regulatory protein conserved among restriction-modification systems. J. Bacteriol., 187, 488-497.
    • (2005) J. Bacteriol , vol.187 , pp. 488-497
    • Knowle, D.1    Lintner, R.E.2    Touma, Y.M.3    Blumenthal, R.M.4
  • 25
    • 0028094540 scopus 로고
    • Lambda cI repressor mutants altered in transcriptional activation
    • Kolkhof,P. and Muller-Hill,B. (1994) Lambda cI repressor mutants altered in transcriptional activation. J. Mol. Biol., 242, 23-36.
    • (1994) J. Mol. Biol , vol.242 , pp. 23-36
    • Kolkhof, P.1    Muller-Hill, B.2
  • 26
    • 0032568598 scopus 로고    scopus 로고
    • Restriction-modification gene complexes as selfish gene entities: Roles of a regulatory system in their establishment, maintenance, and apoptotic mutual exclusion
    • Nakayama,Y. and Kobayashi,I. (1998) Restriction-modification gene complexes as selfish gene entities: Roles of a regulatory system in their establishment, maintenance, and apoptotic mutual exclusion. Proc. Natl Acad. Sci. USA, 95, 6442-6447.
    • (1998) Proc. Natl Acad. Sci. USA , vol.95 , pp. 6442-6447
    • Nakayama, Y.1    Kobayashi, I.2
  • 27
    • 0031782375 scopus 로고    scopus 로고
    • Control of expression of LlaI restriction in Lactococcus lactis
    • O'Sullivan,D.J. and Klaenhammer,T.R. (1998) Control of expression of LlaI restriction in Lactococcus lactis. Mol. Microbiol., 27, 1009-1020.
    • (1998) Mol. Microbiol , vol.27 , pp. 1009-1020
    • O'Sullivan, D.J.1    Klaenhammer, T.R.2
  • 28
    • 0033988985 scopus 로고    scopus 로고
    • Role and mechanism of action of C. PvuII, a regulatory protein conserved among restriction-modification systems
    • Vijesurier,R.M., Carlock,L., Blumenthal,R.M. and Dunbar,J.C. (2000) Role and mechanism of action of C. PvuII, a regulatory protein conserved among restriction-modification systems. J. Bacteriol., 182, 477-487.
    • (2000) J. Bacteriol , vol.182 , pp. 477-487
    • Vijesurier, R.M.1    Carlock, L.2    Blumenthal, R.M.3    Dunbar, J.C.4
  • 29
    • 36749088056 scopus 로고    scopus 로고
    • Regulatory circuit based on autogenous activation-repression: Roles of C-boxes and spacer sequences in control of the PvuII restriction-modification system
    • Mruk,I., Rajesh,P. and Blumenthal,R.M. (2007) Regulatory circuit based on autogenous activation-repression: Roles of C-boxes and spacer sequences in control of the PvuII restriction-modification system. Nucleic Acids Res., 35, 6935-6952.
    • (2007) Nucleic Acids Res , vol.35 , pp. 6935-6952
    • Mruk, I.1    Rajesh, P.2    Blumenthal, R.M.3
  • 32
    • 0242400018 scopus 로고    scopus 로고
    • Degradation of mRNA in bacteria: Emergence of ubiquitous features
    • Regnier,P. and Arraiano,C.M. (2000) Degradation of mRNA in bacteria: emergence of ubiquitous features. Bioessays, 22, 235-244.
    • (2000) Bioessays , vol.22 , pp. 235-244
    • Regnier, P.1    Arraiano, C.M.2
  • 33
    • 0026602370 scopus 로고
    • Organization and function of the mcrBC genes of Escherichia coli K-12
    • Raleigh,E.A. (1992) Organization and function of the mcrBC genes of Escherichia coli K-12. Mol. Microbiol., 6, 1079-1086.
    • (1992) Mol. Microbiol , vol.6 , pp. 1079-1086
    • Raleigh, E.A.1
  • 35
    • 0017324372 scopus 로고
    • Stability of the carrier state in bacteriophage M13-infected cells
    • Merriam,V. (1977) Stability of the carrier state in bacteriophage M13-infected cells. J. Virol., 21, 880-888.
    • (1977) J. Virol , vol.21 , pp. 880-888
    • Merriam, V.1
  • 36
    • 0014673688 scopus 로고
    • Loss of an episomal fertility factor following the multiplication of coliphage M13
    • Palchoudhury,S.R. and Iyer,V.N. (1969) Loss of an episomal fertility factor following the multiplication of coliphage M13. Mol. Gen. Genet., 105, 131-139.
    • (1969) Mol. Gen. Genet , vol.105 , pp. 131-139
    • Palchoudhury, S.R.1    Iyer, V.N.2
  • 38
    • 0026822738 scopus 로고
    • SOS induction in Escherichia coli by infection with mutant filamentous phage that are defective in initiation of complementary-strand DNA synthesis
    • Higashitani,N., Higashitani,A., Roth,A. and Horiuchi,K. (1992) SOS induction in Escherichia coli by infection with mutant filamentous phage that are defective in initiation of complementary-strand DNA synthesis. J. Bacteriol., 174, 1612-1618.
    • (1992) J. Bacteriol , vol.174 , pp. 1612-1618
    • Higashitani, N.1    Higashitani, A.2    Roth, A.3    Horiuchi, K.4
  • 39
    • 0025848721 scopus 로고
    • Biochemical and biological function of Escherichia coli RecA protein: Behavior of mutant RecA proteins
    • Kowalczykowski,S.C. (1991) Biochemical and biological function of Escherichia coli RecA protein: Behavior of mutant RecA proteins. Biochimie, 73, 289-304.
    • (1991) Biochimie , vol.73 , pp. 289-304
    • Kowalczykowski, S.C.1
  • 40
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl,M.W. (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res., 29, e45.
    • (2001) Nucleic Acids Res , vol.29
    • Pfaffl, M.W.1
  • 41
    • 21344471138 scopus 로고    scopus 로고
    • Real-time RT-PCR normalisation; strategies and considerations
    • Huggett,J., Dheda,K., Bustin,S. and Zumla,A. (2005) Real-time RT-PCR normalisation; strategies and considerations. Genes Immun., 6 279-284.
    • (2005) Genes Immun , vol.6 , pp. 279-284
    • Huggett, J.1    Dheda, K.2    Bustin, S.3    Zumla, A.4
  • 42
    • 0037162469 scopus 로고    scopus 로고
    • Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays
    • Bernstein,J.A., Khodursky,A.B., Lin,P.H., Lin-Chao,S. and Cohen,S.N. (2002) Global analysis of mRNA decay and abundance in Escherichia coli at single-gene resolution using two-color fluorescent DNA microarrays. Proc. Natl Acad. Sci. USA, 99, 9697-9702.
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 9697-9702
    • Bernstein, J.A.1    Khodursky, A.B.2    Lin, P.H.3    Lin-Chao, S.4    Cohen, S.N.5
  • 44
    • 0014355474 scopus 로고
    • Replication of coliphage M-13. I. Effects on host cells after synchronized infection
    • Brown,L.R. and Dowell,C.E. (1968) Replication of coliphage M-13. I. Effects on host cells after synchronized infection. J. Virol., 2, 1290-1295.
    • (1968) J. Virol , vol.2 , pp. 1290-1295
    • Brown, L.R.1    Dowell, C.E.2
  • 45
    • 0018960421 scopus 로고
    • Transcription of bacteriophage fl. The major in vivo RNAs
    • Cashman,J.S., Webster,R.E. and Steege,D.A. (1980) Transcription of bacteriophage fl. The major in vivo RNAs. J. Biol. Chem., 255 2554-2562.
    • (1980) J. Biol. Chem , vol.255 , pp. 2554-2562
    • Cashman, J.S.1    Webster, R.E.2    Steege, D.A.3
  • 46
    • 0016276266 scopus 로고
    • Filamentous bacterial viruses. XIL. Molecular architecture of the class I (fd, If1, IKe) virion
    • Marvin,D.A., Pigram,W.J., Wiseman,R.L., Wachtel,E.J. and Marvin,F.J. (1974) Filamentous bacterial viruses. XIL. Molecular architecture of the class I (fd, If1, IKe) virion. J. Mol. Biol., 88, 581-598.
    • (1974) J. Mol. Biol , vol.88 , pp. 581-598
    • Marvin, D.A.1    Pigram, W.J.2    Wiseman, R.L.3    Wachtel, E.J.4    Marvin, F.J.5
  • 47
    • 0036301383 scopus 로고    scopus 로고
    • Delineating the site of interaction on the pIII protein of filamentous bacteriophage fd with the F-pilus of Escherichia coli
    • Deng,L.W. and Perham,R.N. (2002) Delineating the site of interaction on the pIII protein of filamentous bacteriophage fd with the F-pilus of Escherichia coli. J. Mol. Biol., 319, 603-614.
    • (2002) J. Mol. Biol , vol.319 , pp. 603-614
    • Deng, L.W.1    Perham, R.N.2
  • 48
    • 0036193060 scopus 로고    scopus 로고
    • Mutational analysis of F-pilin reveals domains for pilus assembly, phage infection and DNA transfer
    • Manchak,J., Anthony,K.G. and Frost,L.S. (2002) Mutational analysis of F-pilin reveals domains for pilus assembly, phage infection and DNA transfer. Mol. Microbiol., 43, 195-205.
    • (2002) Mol. Microbiol , vol.43 , pp. 195-205
    • Manchak, J.1    Anthony, K.G.2    Frost, L.S.3
  • 49
    • 0024786739 scopus 로고
    • Phage Trojan horses: A conditional expression system for lethal genes
    • Heitman,J., Fulford,W. and Model,P. (1989) Phage Trojan horses: A conditional expression system for lethal genes. Gene, 85, 193-197.
    • (1989) Gene , vol.85 , pp. 193-197
    • Heitman, J.1    Fulford, W.2    Model, P.3
  • 50
    • 0029805686 scopus 로고    scopus 로고
    • Transcription-induced deletions in plasmid vectors: M13 DNA replication as a source of instability
    • Vilette,D., Ehrlich,S.D. and Michel,B. (1996) Transcription-induced deletions in plasmid vectors: M13 DNA replication as a source of instability. Mol. Gen. Genet., 252, 398-403.
    • (1996) Mol. Gen. Genet , vol.252 , pp. 398-403
    • Vilette, D.1    Ehrlich, S.D.2    Michel, B.3
  • 51
    • 0028799986 scopus 로고
    • Analysis of cell size and DNA content in exponentially growing and stationary-phase batch cultures of Escherichia coli
    • Akerlund,T., Nordstrom,K. and Bernander,R. (1995) Analysis of cell size and DNA content in exponentially growing and stationary-phase batch cultures of Escherichia coli. J. Bacteriol., 177, 6791-6797.
    • (1995) J. Bacteriol , vol.177 , pp. 6791-6797
    • Akerlund, T.1    Nordstrom, K.2    Bernander, R.3
  • 52
    • 0025098031 scopus 로고
    • The distribution of restriction enzyme sites in Escherichia coli
    • Churchill,G.A., Daniels,D.L. and Waterman,M.S. (1990) The distribution of restriction enzyme sites in Escherichia coli. Nucleic Acids Res. 18, 589-597.
    • (1990) Nucleic Acids Res , vol.18 , pp. 589-597
    • Churchill, G.A.1    Daniels, D.L.2    Waterman, M.S.3
  • 54
    • 35548960837 scopus 로고    scopus 로고
    • RecBCD and RecJ/RecQ initiate DNA degradation on distinct substrates in UV-irradiated Escherichia coli
    • Chow,K.H. and Courcelle,J. (2007) RecBCD and RecJ/RecQ initiate DNA degradation on distinct substrates in UV-irradiated Escherichia coli. Radiat. Res., 168, 499-506.
    • (2007) Radiat. Res , vol.168 , pp. 499-506
    • Chow, K.H.1    Courcelle, J.2
  • 55
    • 0034034023 scopus 로고    scopus 로고
    • Cellular responses to postsegregational killing by restriction-modification genes
    • Handa,N., Ichige,A., Kusano,K. and Kobayashi,I. (2000) Cellular responses to postsegregational killing by restriction-modification genes. J. Bacteriol., 182, 2218-2229.
    • (2000) J. Bacteriol , vol.182 , pp. 2218-2229
    • Handa, N.1    Ichige, A.2    Kusano, K.3    Kobayashi, I.4
  • 56
    • 0027524563 scopus 로고
    • Heat shock and osmotically dependent steps by DNA uptake after Escherichia coli electroporation
    • Antonov,P.A., Maximova,V.A. and Pancheva,R.P. (1993) Heat shock and osmotically dependent steps by DNA uptake after Escherichia coli electroporation. Biochim. Biophys. Acta, 1216, 286-288.
    • (1993) Biochim. Biophys. Acta , vol.1216 , pp. 286-288
    • Antonov, P.A.1    Maximova, V.A.2    Pancheva, R.P.3
  • 57
    • 0026038362 scopus 로고
    • Plasmid transformation of Escherichia coli and other bacteria
    • Hanahan,D., Jessee,J. and Bloom,F.R. (1991) Plasmid transformation of Escherichia coli and other bacteria. Methods Enzymol., 204 63-113.
    • (1991) Methods Enzymol , vol.204 , pp. 63-113
    • Hanahan, D.1    Jessee, J.2    Bloom, F.R.3
  • 58
    • 0032796420 scopus 로고    scopus 로고
    • Bacterial growth: Constant obsession with dN/dt
    • Neidhardt,F.C. (1999) Bacterial growth: Constant obsession with dN/dt. J. Bacteriol., 181, 7405-7408.
    • (1999) J. Bacteriol , vol.181 , pp. 7405-7408
    • Neidhardt, F.C.1
  • 59
    • 0025734125 scopus 로고
    • Filamentous phage assembly
    • Russel,M. (1991) Filamentous phage assembly. Mol. Microbiol., 5 1607-1613.
    • (1991) Mol. Microbiol , vol.5 , pp. 1607-1613
    • Russel, M.1
  • 60
    • 0037379524 scopus 로고    scopus 로고
    • Use of genetically engineered phage to deliver antimicrobial agents to bacteria: An alternative therapy for treatment of bacterial infections
    • Westwater,C., Kasman,L.M., Schofield,D.A., Werner,P.A., Dolan,J.W., Schmidt,M.G. and Norris,J.S. (2003) Use of genetically engineered phage to deliver antimicrobial agents to bacteria: An alternative therapy for treatment of bacterial infections. Antimicrob. Agents Chemother., 47, 1301-1307.
    • (2003) Antimicrob. Agents Chemother , vol.47 , pp. 1301-1307
    • Westwater, C.1    Kasman, L.M.2    Schofield, D.A.3    Werner, P.A.4    Dolan, J.W.5    Schmidt, M.G.6    Norris, J.S.7
  • 61
    • 0141762466 scopus 로고    scopus 로고
    • Genetically modified filamentous phage as bactericidal agents: A pilot study
    • Hagens,S. and Blasi,U. (2003) Genetically modified filamentous phage as bactericidal agents: A pilot study. Lett. Appl. Microbiol., 37 318-323.
    • (2003) Lett. Appl. Microbiol , vol.37 , pp. 318-323
    • Hagens, S.1    Blasi, U.2
  • 62
    • 0014838846 scopus 로고
    • Increased fragility of Escherichia coli after infection with bacteriophage M13
    • Roy,A. and Mitra,S. (1970) Increased fragility of Escherichia coli after infection with bacteriophage M13. J. Virol., 6, 333-339.
    • (1970) J. Virol , vol.6 , pp. 333-339
    • Roy, A.1    Mitra, S.2
  • 63
    • 0035951301 scopus 로고    scopus 로고
    • Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP
    • Barker,M.M., Gaal,T. and Gourse,R.L. (2001) Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP. J. Mol. Biol. 305, 689-702.
    • (2001) J. Mol. Biol , vol.305 , pp. 689-702
    • Barker, M.M.1    Gaal, T.2    Gourse, R.L.3
  • 65
    • 0032786457 scopus 로고    scopus 로고
    • Homologous recombination and sex as a strategy against selfish genes attacking the genome
    • Kobayashi,I. (1999) Homologous recombination and sex as a strategy against selfish genes attacking the genome. Ann NY Acad. Sci., 870, 354-356.
    • (1999) Ann NY Acad. Sci , vol.870 , pp. 354-356
    • Kobayashi, I.1
  • 66
    • 0032728707 scopus 로고    scopus 로고
    • Post-segregational killing by restriction modification gene complexes: Observations of individual cell deaths
    • Handa,N. and Kobayashi,I. (1999) Post-segregational killing by restriction modification gene complexes: Observations of individual cell deaths. Biochimie, 81, 931-938.
    • (1999) Biochimie , vol.81 , pp. 931-938
    • Handa, N.1    Kobayashi, I.2
  • 67
    • 0036226256 scopus 로고    scopus 로고
    • Mobility of a restriction-modification system revealed by its genetic contexts in three hosts
    • Naderer,M., Brust,J.R., Knowle,D. and Blumenthal,R.M. (2002) Mobility of a restriction-modification system revealed by its genetic contexts in three hosts. J. Bacteriol., 184, 2411-2419.
    • (2002) J. Bacteriol , vol.184 , pp. 2411-2419
    • Naderer, M.1    Brust, J.R.2    Knowle, D.3    Blumenthal, R.M.4
  • 68
    • 0034663684 scopus 로고    scopus 로고
    • Recognition of native DNA methylation by the PvuII restriction endonuclease
    • Rice,M.R. and Blumenthal,R.M. (2000) Recognition of native DNA methylation by the PvuII restriction endonuclease. Nucleic Acids Res. 28, 3143-3150.
    • (2000) Nucleic Acids Res , vol.28 , pp. 3143-3150
    • Rice, M.R.1    Blumenthal, R.M.2
  • 69
    • 0032882797 scopus 로고    scopus 로고
    • DNA nicks inflicted by restriction endonucleases are repaired by a RecA- and RecB-dependent pathway in Escherichia coli
    • Heitman,J., Ivanenko,T. and Kiss,A. (1999) DNA nicks inflicted by restriction endonucleases are repaired by a RecA- and RecB-dependent pathway in Escherichia coli. Mol. Microbiol., 33, 1141-1151.
    • (1999) Mol. Microbiol , vol.33 , pp. 1141-1151
    • Heitman, J.1    Ivanenko, T.2    Kiss, A.3
  • 70
    • 0027237522 scopus 로고
    • Delayed expression of in vivo restriction activity following conjugal transfer of Escherichia coli hsdK (restriction-modification) genes
    • Prakash-Cheng,A. and Ryu,J. (1993) Delayed expression of in vivo restriction activity following conjugal transfer of Escherichia coli hsdK (restriction-modification) genes. J. Bacteriol., 175 4905-4906.
    • (1993) J. Bacteriol , vol.175 , pp. 4905-4906
    • Prakash-Cheng, A.1    Ryu, J.2
  • 71
    • 0027330918 scopus 로고
    • The expression and regulation of hsdK genes after conjugative transfer
    • Prakash-Cheng,A., Chung,S.S. and Ryu,J. (1993) The expression and regulation of hsdK genes after conjugative transfer. Mol. Gen. Genet. 241, 491-496.
    • (1993) Mol. Gen. Genet , vol.241 , pp. 491-496
    • Prakash-Cheng, A.1    Chung, S.S.2    Ryu, J.3
  • 72
    • 0348225084 scopus 로고    scopus 로고
    • Is modification sufficient to protect a bacterial chromosome from a resident restriction endonuclease?
    • Makovets,S., Powell,L.M., Titheradge,A.J., Blakely,G.W. and Murray,N.E. (2004) Is modification sufficient to protect a bacterial chromosome from a resident restriction endonuclease? Mol. Microbiol., 51, 135-147.
    • (2004) Mol. Microbiol , vol.51 , pp. 135-147
    • Makovets, S.1    Powell, L.M.2    Titheradge, A.J.3    Blakely, G.W.4    Murray, N.E.5
  • 73
    • 34247099832 scopus 로고    scopus 로고
    • Phosphorylation of Type IA restriction-modification complex enzyme EcoKI on the HsdR subunit
    • Cajthamlova,K., Sisakova,E., Weiser,J. and Weiserova,M. (2007) Phosphorylation of Type IA restriction-modification complex enzyme EcoKI on the HsdR subunit. FEMS Microbiol. Lett., 270, 171-177.
    • (2007) FEMS Microbiol. Lett , vol.270 , pp. 171-177
    • Cajthamlova, K.1    Sisakova, E.2    Weiser, J.3    Weiserova, M.4
  • 75
    • 23644443867 scopus 로고    scopus 로고
    • The toxin-antitoxin system of the streptococcal plasmid pSM19035
    • Zielenkiewicz,U. and Ceglowski,P. (2005) The toxin-antitoxin system of the streptococcal plasmid pSM19035. J. Bacteriol., 187, 6094-6105.
    • (2005) J. Bacteriol , vol.187 , pp. 6094-6105
    • Zielenkiewicz, U.1    Ceglowski, P.2
  • 76
    • 36749088056 scopus 로고    scopus 로고
    • Regulatory circuit based on autogenous activation-repression: Roles of C-boxes and spacer sequences in control of the PvuII restriction-modification system
    • Mruk,I., Rajesh,P. and Blumenthal,R.M. (2007) Regulatory circuit based on autogenous activation-repression: Roles of C-boxes and spacer sequences in control of the PvuII restriction-modification system. Nucleic Acids Res., 35, 6935-6952.
    • (2007) Nucleic Acids Res , vol.35 , pp. 6935-6952
    • Mruk, I.1    Rajesh, P.2    Blumenthal, R.M.3
  • 77
    • 0037315564 scopus 로고    scopus 로고
    • Global RNA half-life analysis in Escherichia coli reveals positional patterns of transcript degradation
    • Selinger,D.W., Saxena,R.M., Cheung,K.J., Church,G.M. and Rosenow,C. (2003) Global RNA half-life analysis in Escherichia coli reveals positional patterns of transcript degradation. Genome Res., 13 216-223.
    • (2003) Genome Res , vol.13 , pp. 216-223
    • Selinger, D.W.1    Saxena, R.M.2    Cheung, K.J.3    Church, G.M.4    Rosenow, C.5
  • 78
    • 34250875706 scopus 로고    scopus 로고
    • Initiation of RNA decay in Escherichia coli by 5′ pyrophosphate removal
    • Celesnik,H., Deana,A. and Belasco,J.G. (2007) Initiation of RNA decay in Escherichia coli by 5′ pyrophosphate removal. Mol. Cell, 27, 79-90.
    • (2007) Mol. Cell , vol.27 , pp. 79-90
    • Celesnik, H.1    Deana, A.2    Belasco, J.G.3
  • 80
    • 34247158257 scopus 로고    scopus 로고
    • Mechanism of RNA silencing by Hfq-binding small RNAs
    • Aiba,H. (2007) Mechanism of RNA silencing by Hfq-binding small RNAs. Curr. Opin. Microbiol., 10, 134-139.
    • (2007) Curr. Opin. Microbiol , vol.10 , pp. 134-139
    • Aiba, H.1
  • 81
    • 0030762448 scopus 로고    scopus 로고
    • Oriented DNA binding by one-armed lambda repressor heterodimers and contacts between repressor and RNA polymerase at P(RM)
    • Kim,Y.I. and Hu,J.C. (1997) Oriented DNA binding by one-armed lambda repressor heterodimers and contacts between repressor and RNA polymerase at P(RM). Mol. Microbiol., 25, 311-318.
    • (1997) Mol. Microbiol , vol.25 , pp. 311-318
    • Kim, Y.I.1    Hu, J.C.2
  • 82
    • 0021943518 scopus 로고
    • Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors
    • Yanisch-Perron,C., Vieira,J. and Messing,J. (1985) Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors. Gene, 33, 103-119.
    • (1985) Gene , vol.33 , pp. 103-119
    • Yanisch-Perron, C.1    Vieira, J.2    Messing, J.3
  • 83
    • 0017807890 scopus 로고
    • Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid
    • Chang,A.C. and Cohen,S.N. (1978) Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid. J. Bacteriol., 134, 1141-1156.
    • (1978) J. Bacteriol , vol.134 , pp. 1141-1156
    • Chang, A.C.1    Cohen, S.N.2
  • 84
    • 0021271212 scopus 로고
    • Plasmid vectors for the selection of promoters
    • Brosius,J. (1984) Plasmid vectors for the selection of promoters. Gene, 27, 151-160.
    • (1984) Gene , vol.27 , pp. 151-160
    • Brosius, J.1


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