-
1
-
-
15744401773
-
Eukaryotic cytosine methyltransferases
-
Goll, M. G. and Bestor, T. H. (2005) Eukaryotic cytosine methyltransferases. Annu. Rev. Biochem., 74, 481-514.
-
(2005)
Annu. Rev. Biochem.
, vol.74
, pp. 481-514
-
-
Goll, M.G.1
Bestor, T.H.2
-
2
-
-
0031792779
-
Identification and characterization of a family of mammalian methyl-CpG binding proteins
-
Hendrich, B. and Bird, A. (1998) Identification and characterization of a family of mammalian methyl-CpG binding proteins. Mol. Cell Biol., 18, 6538-6547.
-
(1998)
Mol. Cell. Biol.
, vol.18
, pp. 6538-6547
-
-
Hendrich, B.1
Bird, A.2
-
3
-
-
0026747761
-
Purification, sequence, and cellular localization of a novel chromosomal protein that binds to methylated DNA
-
Lewis, J. D., Meehan, R. R., Henzel, W. J., Maurer-Fogy, I., Jeppesen, P., Klein, F. and Bird, A. (1992) Purification, sequence, and cellular localization of a novel chromosomal protein that binds to methylated DNA. Cell, 69, 905-914.
-
(1992)
Cell.
, vol.69
, pp. 905-914
-
-
Lewis, J.D.1
Meehan, R.R.2
Henzel, W.J.3
Maurer-Fogy, I.4
Jeppesen, P.5
Klein, F.6
Bird, A.7
-
4
-
-
0031837109
-
Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription
-
Jones, P. L., Veenstra, G. J., Wade, P. A., Vermaak, D., Kass, S. U., Landsberger, N., Strouboulis, J. and Wolffe, A. P. (1998) Methylated DNA and MeCP2 recruit histone deacetylase to repress transcription. Nat. Genet., 19, 187-191.
-
(1998)
Nat. Genet.
, vol.19
, pp. 187-191
-
-
Jones, P.L.1
Veenstra, G.J.2
Wade, P.A.3
Vermaak, D.4
Kass, S.U.5
Landsberger, N.6
Strouboulis, J.7
Wolffe, A.P.8
-
5
-
-
0032574977
-
Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex
-
Nan, X., Ng, H. H., Johnson, C. A., Laherty, C. D., Turner, B. M., Eisenman, R. N. and Bird, A. (1998) Transcriptional repression by the methyl-CpG-binding protein MeCP2 involves a histone deacetylase complex. Nature, 393, 386-389.
-
(1998)
Nature
, vol.393
, pp. 386-389
-
-
Nan, X.1
Ng, H.H.2
Johnson, C.A.3
Laherty, C.D.4
Turner, B.M.5
Eisenman, R.N.6
Bird, A.7
-
6
-
-
45849105557
-
MeCP2, a key contributor to neurological disease, activates and represses transcription
-
Chahrour, M., Jung, S. Y., Shaw, C., Zhou, X., Wong, S. T., Qin, J. and Zoghbi, H. Y. (2008) MeCP2, a key contributor to neurological disease, activates and represses transcription. Science, 320, 1224-1229.
-
(2008)
Science
, vol.320
, pp. 1224-1229
-
-
Chahrour, M.1
Jung, S.Y.2
Shaw, C.3
Zhou, X.4
Wong, S.T.5
Qin, J.6
Zoghbi, H.Y.7
-
7
-
-
20144379888
-
Brahma links the SWI/SNF chromatin-remodeling complex with MeCP2-dependent transcriptional silencing
-
Harikrishnan, K. N., Chow, M. Z., Baker, E. K., Pal, S., Bassal, S., Brasacchio, D., Wang, L., Craig, J. M., Jones, P. L., Sif, S. et al. (2005) Brahma links the SWI/SNF chromatin-remodeling complex with MeCP2-dependent transcriptional silencing. Nat. Genet., 37, 254-264.
-
(2005)
Nat. Genet.
, vol.37
, pp. 254-264
-
-
Harikrishnan, K.N.1
Chow, M.Z.2
Baker, E.K.3
Pal, S.4
Bassal, S.5
Brasacchio, D.6
Wang, L.7
Craig, J.M.8
Jones, P.L.9
Sif, S.10
-
8
-
-
37649022627
-
Integrated epigenomic analyses of neuronal MeCP2 reveal a role for long-range interaction with active genes
-
Yasui, D. H., Peddada, S., Bieda, M. C., Vallero, R. O., Hogart, A., Nagarajan, R. P., Thatcher, K. N., Farnham, P. J. and Lasalle, J. M. (2007) Integrated epigenomic analyses of neuronal MeCP2 reveal a role for long-range interaction with active genes. Proc. Natl Acad. Sci. USA, 104, 19416-19421.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 19416-19421
-
-
Yasui, D.H.1
Peddada, S.2
Bieda, M.C.3
Vallero, R.O.4
Hogart, A.5
Nagarajan, R.P.6
Thatcher, K.N.7
Farnham, P.J.8
Lasalle, J.M.9
-
9
-
-
0042357071
-
Chromatin compaction by human MeCP2. Assembly of novel secondary chromatin structures in the absence of DNA methylation
-
Georgel, P. T., Horowitz-Scherer, R. A., Adkins, N., Woodcock, C. L., Wade, P. A. and Hansen, J. C. (2003) Chromatin compaction by human MeCP2. Assembly of novel secondary chromatin structures in the absence of DNA methylation. J. Biol. Chem., 278, 32181-32188.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 32181-32188
-
-
Georgel, P.T.1
Horowitz-Scherer, R.A.2
Adkins, N.3
Woodcock, C.L.4
Wade, P.A.5
Hansen, J.C.6
-
10
-
-
33846637375
-
Multiple modes of interaction between the methylated DNA binding protein MeCP2 and chromatin
-
Nikitina, T., Shi, X., Ghosh, R. P., Horowitz-Scherer, R. A., Hansen, J. C. and Woodcock, C. L. (2007) Multiple modes of interaction between the methylated DNA binding protein MeCP2 and chromatin. Mol. Cell Biol., 27, 864-877.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 864-877
-
-
Nikitina, T.1
Shi, X.2
Ghosh, R.P.3
Horowitz-Scherer, R.A.4
Hansen, J.C.5
Woodcock, C.L.6
-
11
-
-
11244328520
-
Loss of silent-chromatin looping and impaired imprinting of DLX5 in Rett syndrome
-
Horike, S., Cai, S., Miyano, M., Cheng, J. F. and Kohwi-Shigematsu, T. (2005) Loss of silent-chromatin looping and impaired imprinting of DLX5 in Rett syndrome. Nat. Genet., 37, 31-40.
-
(2005)
Nat. Genet.
, vol.37
, pp. 31-40
-
-
Horike, S.1
Cai, S.2
Miyano, M.3
Cheng, J.F.4
Kohwi-Shigematsu, T.5
-
12
-
-
0032830639
-
Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2
-
Amir, R. E., Van den Veyver, I. B., Wan, M., Tran, C. Q., Francke, U. and Zoghbi, H. Y. (1999) Rett syndrome is caused by mutations in X-linked MECP2, encoding methyl-CpG-binding protein 2. Nat. Genet., 23, 185-188.
-
(1999)
Nat. Genet.
, vol.23
, pp. 185-188
-
-
Amir, R.E.1
Van Den Veyver, I.B.2
Wan, M.3
Tran, C.Q.4
Francke, U.5
Zoghbi, H.Y.6
-
13
-
-
33746257309
-
Irradiation induces DNA damage and modulates epigenetic effectors in distant bystander tissue in vivo
-
Koturbash, I., Rugo, R. E., Hendricks, C. A., Loree, J., Thibault, B., Kutanzi, K., Pogribny, I., Yanch, J. C., Engelward, B. P. and Kovalchuk, O. (2006) Irradiation induces DNA damage and modulates epigenetic effectors in distant bystander tissue in vivo. Oncogene, 25, 4267-4275.
-
(2006)
Oncogene
, vol.25
, pp. 4267-4275
-
-
Koturbash, I.1
Rugo, R.E.2
Hendricks, C.A.3
Loree, J.4
Thibault, B.5
Kutanzi, K.6
Pogribny, I.7
Yanch, J.C.8
Engelward, B.P.9
Kovalchuk, O.10
-
14
-
-
29244477844
-
A human protein atlas for normal and cancer tissues based on antibody proteomics
-
Uhlen, M., Bjorling, E., Agaton, C., Szigyarto, C. A., Amini, B., Andersen, E., Andersson, A. C., Angelidou, P., Asplund, A., Asplund, C. et al. (2005) A human protein atlas for normal and cancer tissues based on antibody proteomics. Mol. Cell Proteomics, 4, 1920-1932.
-
(2005)
Mol. Cell. Proteomics
, vol.4
, pp. 1920-1932
-
-
Uhlen, M.1
Bjorling, E.2
Agaton, C.3
Szigyarto, C.A.4
Amini, B.5
Andersen, E.6
Andersson, A.C.7
Angelidou, P.8
Asplund, A.9
Asplund, C.10
-
15
-
-
0026413186
-
Infectious paradigm
-
Brash, D. E. (1991) Infectious paradigm. Nature, 351, 9.
-
(1991)
Nature
, vol.351
, pp. 9
-
-
Brash, D.E.1
-
16
-
-
0027166864
-
Mutation hotspots due to sunlight in the p53 gene of nonmelanoma skin cancers
-
Ziegler, A., Leffell, D. J., Kunala, S., Sharma, H. W., Gailani, M., Simon, J. A., Halperin, A. J., Baden, H. P., Shapiro, P. E., Bale, A. E. et al. (1993) Mutation hotspots due to sunlight in the p53 gene of nonmelanoma skin cancers. Proc. Natl Acad. Sci. USA, 90, 4216-4220.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 4216-4220
-
-
Ziegler, A.1
Leffell, D.J.2
Kunala, S.3
Sharma, H.W.4
Gailani, M.5
Simon, J.A.6
Halperin, A.J.7
Baden, H.P.8
Shapiro, P.E.9
Bale, A.E.10
-
17
-
-
0031417965
-
The role of UV-B light in skin carcinogenesis through the analysis of p53 mutations in squamous cell carcinomas of hairless mice
-
Dumaz, N., van Kranen, H. J., de Vries, A., Berg, R. J., Wester, P. W., van Kreijl, C. F., Sarasin, A., Daya-Grosjean, L. and de Gruijl, F. R. (1997) The role of UV-B light in skin carcinogenesis through the analysis of p53 mutations in squamous cell carcinomas of hairless mice. Carcinogenesis, 18, 897-904.
-
(1997)
Carcinogenesis
, vol.18
, pp. 897-904
-
-
Dumaz, N.1
Van Kranen, H.J.2
De Vries, A.3
Berg, R.J.4
Wester, P.W.5
Van Kreijl, C.F.6
Sarasin, A.7
Daya-Grosjean, L.8
De Gruijl, F.R.9
-
18
-
-
0031989124
-
P53 Mutations in hairless SKH-hr1 mouse skin tumors induced by a solar simulator
-
Ananthaswamy, H. N., Fourtanier, A., Evans, R. L., Tison, S., Medaisko, C., Ullrich, S. E. and Kripke, M. L. (1998) p53 Mutations in hairless SKH-hr1 mouse skin tumors induced by a solar simulator. Photochem Photobiol., 67, 227-232.
-
(1998)
Photochem. Photobiol.
, vol.67
, pp. 227-232
-
-
Ananthaswamy, H.N.1
Fourtanier, A.2
Evans, R.L.3
Tison, S.4
Medaisko, C.5
Ullrich, S.E.6
Kripke, M.L.7
-
19
-
-
0031850079
-
P53 mutations in cutaneous lesions induced in the hairless mouse by a solar ultraviolet light simulator
-
DOI 10.1002/(SICI)1098-2744(199807)22:3<167::AID-MC4>3.0.CO;2-I
-
Queille, S., Seite, S., Tison, S., Medaisko, C., Drougard, C., Fourtanier, A., Sarasin, A. and Daya-Grosjean, L. (1998) p53 mutations in cutaneous lesions induced in the hairless mouse by a solar ultraviolet light simulator. Mol. Carcinog., 22, 167-174. (Pubitemid 28348018)
-
(1998)
Molecular Carcinogenesis
, vol.22
, Issue.3
, pp. 167-174
-
-
Queille, S.1
Seite, S.2
Tison, S.3
Medaisko, C.4
Drougard, C.5
Fourtanier, A.6
Sarasin, A.7
Daya-Grosjean, L.8
-
20
-
-
0030859713
-
Sunlight induces pyrimidine dimers preferentially at 5-methylcytosine bases
-
Tommasi, S., Denissenko, M. F. and Pfeifer, G. P. (1997) Sunlight induces pyrimidine dimers preferentially at 5-methylcytosine bases. Cancer Res., 57, 4727-4730.
-
(1997)
Cancer Res.
, vol.57
, pp. 4727-4730
-
-
Tommasi, S.1
Denissenko, M.F.2
Pfeifer, G.P.3
-
21
-
-
67349122898
-
Influence of cytosine methylation on ultraviolet-induced cyclobutane pyrimidine dimer formation in genomic DNA
-
Rochette, P. J., Lacoste, S., Therrien, J.-P., Bastien, N., Brash, D. E. and Drouin, R. (2009) Influence of cytosine methylation on ultraviolet-induced cyclobutane pyrimidine dimer formation in genomic DNA. Mutat. Res./Fund Mol. Mech. Mutagen., 665, 7-13.
-
(2009)
Mutat. Res./Fund Mol. Mech. Mutagen.
, vol.665
, pp. 7-13
-
-
Rochette, P.J.1
Lacoste, S.2
Therrien, J.-P.3
Bastien, N.4
Brash, D.E.5
Drouin, R.6
-
22
-
-
0030940550
-
Mutagenic properties of the T-C cyclobutane dimer
-
Horsfall, M. J., Borden, A. and Lawrence, C. W. (1997) Mutagenic properties of the T-C cyclobutane dimer. J. Bacteriol., 179, 2835-2839.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 2835-2839
-
-
Horsfall, M.J.1
Borden, A.2
Lawrence, C.W.3
-
23
-
-
0034747804
-
Requirement of DNA polymerase eta for error-free bypass of UV-induced CC and TC photoproducts
-
Yu, S. L., Johnson, R. E., Prakash, S. and Prakash, L. (2001) Requirement of DNA polymerase eta for error-free bypass of UV-induced CC and TC photoproducts. Mol. Cell Biol., 21, 185-188.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 185-188
-
-
Yu, S.L.1
Johnson, R.E.2
Prakash, S.3
Prakash, L.4
-
24
-
-
33746588178
-
DNA synthesis past a 5-methylC-containing cis-syn-cyclobutane pyrimidine dimer by yeast pol eta is highly nonmutagenic
-
Vu, B., Cannistraro, V. J., Sun, L. and Taylor, J. S. (2006) DNA synthesis past a 5-methylC-containing cis-syn-cyclobutane pyrimidine dimer by yeast pol eta is highly nonmutagenic. Biochemistry, 45, 9327-9335.
-
(2006)
Biochemistry
, vol.45
, pp. 9327-9335
-
-
Vu, B.1
Cannistraro, V.J.2
Sun, L.3
Taylor, J.S.4
-
25
-
-
0028358421
-
The rate of hydrolytic deamination of 5-methylcytosine in double-stranded DNA
-
Shen, J. C., Rideout, W. M. 3rd and Jones, P. A. (1994) The rate of hydrolytic deamination of 5-methylcytosine in double-stranded DNA. Nucleic Acids Res., 22, 972-976.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 972-976
-
-
Shen, J.C.1
Rideout III, W.M.2
Jones, P.A.3
-
26
-
-
0032573433
-
Sequence and time-dependent deamination of cytosine bases in UVB-induced cyclobutane pyrimidine dimers in vivo
-
Tu, Y., Dammann, R. and Pfeifer, G. P. (1998) Sequence and time-dependent deamination of cytosine bases in UVB-induced cyclobutane pyrimidine dimers in vivo. J. Mol. Biol., 284, 297-311.
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 297-311
-
-
Tu, Y.1
Dammann, R.2
Pfeifer, G.P.3
-
27
-
-
0038193611
-
Deamination of 5-methylcytosines within cyclobutane pyrimidine dimers is an important component of UVB mutagenesis
-
Lee, D.-H. and Pfeifer, G. P. (2003) Deamination of 5-methylcytosines within cyclobutane pyrimidine dimers is an important component of UVB mutagenesis. J. Biol. Chem., 278, 10314-10321.
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 10314-10321
-
-
Lee, D.-H.1
Pfeifer, G.P.2
-
28
-
-
70149092164
-
Acceleration of 5-methylcytosine deamination in cyclobutane dimers by G and its implications for UV-induced C-to-T mutation hotspots
-
Cannistraro, V. J. and Taylor, J. S. (2009) Acceleration of 5-methylcytosine deamination in cyclobutane dimers by G and its implications for UV-induced C-to-T mutation hotspots. J. Mol. Biol., 392, 1145-1157.
-
(2009)
J. Mol. Biol.
, vol.392
, pp. 1145-1157
-
-
Cannistraro, V.J.1
Taylor, J.S.2
-
29
-
-
0033548231
-
Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase, poleta
-
Johnson, R. E., Prakash, S. and Prakash, L. (1999) Efficient bypass of a thymine-thymine dimer by yeast DNA polymerase, poleta. Science, 283, 1001-1004.
-
(1999)
Science
, vol.283
, pp. 1001-1004
-
-
Johnson, R.E.1
Prakash, S.2
Prakash, L.3
-
30
-
-
0033578040
-
The XPV (xeroderma pigmentosum variant) gene encodes human DNA Polymerase eta
-
Masutani, C., Kusumoto, R. and Hanaoka, F. (1999) The XPV (xeroderma pigmentosum variant) gene encodes human DNA Polymerase eta. Nature, 399, 700.
-
(1999)
Nature
, vol.399
, pp. 700
-
-
Masutani, C.1
Kusumoto, R.2
Hanaoka, F.3
-
31
-
-
0021190168
-
Use of light for footprinting DNA in vivo
-
Becker, M. M. and Wang, J. C. (1984) Use of light for footprinting DNA in vivo. Nature, 309, 682-687.
-
(1984)
Nature
, vol.309
, pp. 682-687
-
-
Becker, M.M.1
Wang, J.C.2
-
32
-
-
0031080738
-
Footprinting with UV irradiation and LMPCR
-
Pfeifer, G. P. and Tornaletti, S. (1997) Footprinting with UV irradiation and LMPCR. Methods, 11, 189-196.
-
(1997)
Methods
, vol.11
, pp. 189-196
-
-
Pfeifer, G.P.1
Tornaletti, S.2
-
33
-
-
0005001210
-
UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases
-
Gale, J. M., Nissen, K. A. and Smerdon, M. J. (1987) UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases. Proc. Natl Acad. Sci. USA, 84, 6644-6648.
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 6644-6648
-
-
Gale, J.M.1
Nissen, K.A.2
Smerdon, M.J.3
-
34
-
-
0026181844
-
DNA repair and the role of chromatin structure
-
Smerdon, M. J. (1991) DNA repair and the role of chromatin structure. Curr. Opin. Cell Biol., 3, 422-428.
-
(1991)
Curr. Opin. Cell. Biol.
, vol.3
, pp. 422-428
-
-
Smerdon, M.J.1
-
35
-
-
0023135193
-
Photofootprinting in vivo detects transcription-dependent changes in yeast TATA boxes
-
Selleck, S. B. and Majors, J. (1987) Photofootprinting in vivo detects transcription-dependent changes in yeast TATA boxes. Nature, 325, 173-177.
-
(1987)
Nature
, vol.325
, pp. 173-177
-
-
Selleck, S.B.1
Majors, J.2
-
36
-
-
0029058984
-
UV light as a footprinting agent: Modulation of UV-induced DNA damage by transcription factors bound at the promoters of three human genes
-
Tornaletti, S. and Pfeifer, G. P. (1995) UV light as a footprinting agent: modulation of UV-induced DNA damage by transcription factors bound at the promoters of three human genes. J. Mol. Biol., 249, 714-728.
-
(1995)
J. Mol. Biol.
, vol.249
, pp. 714-728
-
-
Tornaletti, S.1
Pfeifer, G.P.2
-
37
-
-
0030815234
-
Strand-specific modulation of UV photoproducts in 5S rDNA by TFIIIA binding and their effect on TFIIIA complex formation
-
Liu, X., Conconi, A. and Smerdon, M. J. (1997) Strand-specific modulation of UV photoproducts in 5S rDNA by TFIIIA binding and their effect on TFIIIA complex formation. Biochemistry, 36, 13710-13717.
-
(1997)
Biochemistry
, vol.36
, pp. 13710-13717
-
-
Liu, X.1
Conconi, A.2
Smerdon, M.J.3
-
38
-
-
0024844259
-
Origin of ultraviolet damage in DNA
-
Becker, M. M. and Wang, Z. (1989) Origin of ultraviolet damage in DNA. J. Mol. Biol., 210, 429-438.
-
(1989)
J. Mol. Biol.
, vol.210
, pp. 429-438
-
-
Becker, M.M.1
Wang, Z.2
-
39
-
-
0031080462
-
Formation and processing of UV photoproducts: Effects of DNA sequence and chromatin environment
-
Pfeifer, G. P. (1997) Formation and processing of UV photoproducts: effects of DNA sequence and chromatin environment. Photochem. Photobiol., 65, 270-283.
-
(1997)
Photochem. Photobiol.
, vol.65
, pp. 270-283
-
-
Pfeifer, G.P.1
-
40
-
-
39549090166
-
MeCP2 binding to DNA depends upon hydration at methyl-CpG
-
Ho, K. L., McNae, I. W., Schmiedeberg, L., Klose, R. J., Bird, A. P. and Walkinshaw, M. D. (2008) MeCP2 binding to DNA depends upon hydration at methyl-CpG. Mol. Cell, 29, 525-531.
-
(2008)
Mol. Cell.
, vol.29
, pp. 525-531
-
-
Ho, K.L.1
McNae, I.W.2
Schmiedeberg, L.3
Klose, R.J.4
Bird, A.P.5
Walkinshaw, M.D.6
-
41
-
-
24044523177
-
DNA binding selectivity of MeCP2 due to a requirement for A/T sequences adjacent to methyl-CpG
-
Klose, R. J., Sarraf, S. A., Schmiedeberg, L., McDermott, S. M., Stancheva, I. and Bird, A. P. (2005) DNA binding selectivity of MeCP2 due to a requirement for A/T sequences adjacent to methyl-CpG. Mol. Cell, 19, 667-678.
-
(2005)
Mol. Cell.
, vol.19
, pp. 667-678
-
-
Klose, R.J.1
Sarraf, S.A.2
Schmiedeberg, L.3
McDermott, S.M.4
Stancheva, I.5
Bird, A.P.6
-
42
-
-
4043112183
-
Oxidative damage to methyl-CpG sequences inhibits the binding of the methyl-CpG binding domain (MBD) of methyl-CpG binding protein 2 (MeCP2)
-
Valinluck, V., Tsai, H. H., Rogstad, D. K., Burdzy, A., Bird, A. and Sowers, L. C. (2004) Oxidative damage to methyl-CpG sequences inhibits the binding of the methyl-CpG binding domain (MBD) of methyl-CpG binding protein 2 (MeCP2). Nucleic Acids Res., 32, 4100-4108.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 4100-4108
-
-
Valinluck, V.1
Tsai, H.H.2
Rogstad, D.K.3
Burdzy, A.4
Bird, A.5
Sowers, L.C.6
-
43
-
-
0026353468
-
DNA contacts probed by modification protection and interference studies
-
Wissmann, A. and Hillen, W. (1991) DNA contacts probed by modification protection and interference studies. Methods Enzymol., 208, 365-379.
-
(1991)
Methods Enzymol.
, vol.208
, pp. 365-379
-
-
Wissmann, A.1
Hillen, W.2
-
44
-
-
24044523859
-
Investigations of pyrimidine dimer glycosylases-a paradigm for DNA base excision repair enzymology
-
Lloyd, R. S. (2005) Investigations of pyrimidine dimer glycosylases-a paradigm for DNA base excision repair enzymology. Mutat. Res., 577, 77-91.
-
(2005)
Mutat. Res.
, vol.577
, pp. 77-91
-
-
Lloyd, R.S.1
-
45
-
-
33748754281
-
Sequence-dependent enhancement of hydrolytic deamination of cytosines in DNA by the restriction enzyme PspGI
-
Carpenter, M., Divvela, P., Pingoud, V., Bujnicki, J. and Bhagwat, A. S. (2006) Sequence-dependent enhancement of hydrolytic deamination of cytosines in DNA by the restriction enzyme PspGI. Nucleic Acids Res., 34, 3762-3770.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 3762-3770
-
-
Carpenter, M.1
Divvela, P.2
Pingoud, V.3
Bujnicki, J.4
Bhagwat, A.S.5
-
46
-
-
14644438645
-
Mutations induced by ultraviolet light
-
Pfeifer, G. P., You, Y. H. and Besaratinia, A. (2005) Mutations induced by ultraviolet light. Mutat Res., 571, 19-31.
-
(2005)
Mutat. Res.
, vol.571
, pp. 19-31
-
-
Pfeifer, G.P.1
You, Y.H.2
Besaratinia, A.3
-
47
-
-
33846827203
-
Thymine dimerization in DNA is an ultrafast photoreaction
-
Schreier, W. J., Schrader, T. E., Koller, F. O., Gilch, P., Crespo-Hernandez, C. E., Swaminathan, V. N., Carell, T., Zinth, W. and Kohler, B. (2007) Thymine dimerization in DNA is an ultrafast photoreaction. Science, 315, 625-629.
-
(2007)
Science
, vol.315
, pp. 625-629
-
-
Schreier, W.J.1
Schrader, T.E.2
Koller, F.O.3
Gilch, P.4
Crespo-Hernandez, C.E.5
Swaminathan, V.N.6
Carell, T.7
Zinth, W.8
Kohler, B.9
-
48
-
-
43649101919
-
Predicting thymine dimerization yields from molecular dynamics simulations
-
Law, Y. K., Azadi, J., Crespo-Hernandez, C. E., Olmon, E. and Kohler, B. (2008) Predicting thymine dimerization yields from molecular dynamics simulations. Biophys J., 94, 3590-3600.
-
(2008)
Biophys. J.
, vol.94
, pp. 3590-3600
-
-
Law, Y.K.1
Azadi, J.2
Crespo-Hernandez, C.E.3
Olmon, E.4
Kohler, B.5
-
49
-
-
0026566518
-
Binding of transcription factors creates hot spots for UV photoproducts in vivo
-
Pfeifer, G. P., Drouin, R., Riggs, A. D. and Holmquist, G. P. (1992) Binding of transcription factors creates hot spots for UV photoproducts in vivo. Mol. Cell Biol., 12, 1798-1804.
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 1798-1804
-
-
Pfeifer, G.P.1
Drouin, R.2
Riggs, A.D.3
Holmquist, G.P.4
-
50
-
-
0033556098
-
TATA-binding protein promotes the selective formation of UV-induced (6-4) - Photoproducts and modulates DNA repair in the TATA box
-
Aboussekhra, A. and Thoma, F. (1999) TATA-binding protein promotes the selective formation of UV-induced (6-4) - photoproducts and modulates DNA repair in the TATA box. EMBO J., 18, 433-443.
-
(1999)
EMBO J.
, vol.18
, pp. 433-443
-
-
Aboussekhra, A.1
Thoma, F.2
-
51
-
-
0027250617
-
Crystal structure of yeast TATA-binding protein and model for interaction with DNA
-
Chasman, D. I., Flaherty, K. M., Sharp, P. A. and Kornberg, R. D. (1993) Crystal structure of yeast TATA-binding protein and model for interaction with DNA. Proc. Natl Acad. Sci. USA, 90, 8174-8178.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 8174-8178
-
-
Chasman, D.I.1
Flaherty, K.M.2
Sharp, P.A.3
Kornberg, R.D.4
-
52
-
-
0035797936
-
Use of a combined enzymatic digestion/ESI mass spectrometry assay to study the effect of TATA-binding protein on photoproduct formation in a TATA box
-
Wang, Y., Gross, M. L. and Taylor, J. S. (2001) Use of a combined enzymatic digestion/ESI mass spectrometry assay to study the effect of TATA-binding protein on photoproduct formation in a TATA box. Biochemistry, 40, 11785-11793.
-
(2001)
Biochemistry
, vol.40
, pp. 11785-11793
-
-
Wang, Y.1
Gross, M.L.2
Taylor, J.S.3
-
53
-
-
18744401872
-
Crystal structure of a DNA decamer containing a cis-syn thymine dimer
-
Park, H., Zhang, K., Ren, Y., Nadji, S., Sinha, N., Taylor, J. S. and Kang, C. (2002) Crystal structure of a DNA decamer containing a cis-syn thymine dimer. Proc. Natl Acad. Sci. USA, 99, 15965-15970.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 15965-15970
-
-
Park, H.1
Zhang, K.2
Ren, Y.3
Nadji, S.4
Sinha, N.5
Taylor, J.S.6
Kang, C.7
-
54
-
-
0029774202
-
Inhibition of transcription factor binding by ultraviolet-induced pyrimidine dimers
-
Tommasi, S., Swiderski, P. M., Tu, Y., Kaplan, B. E. and Pfeifer, G. P. (1996) Inhibition of transcription factor binding by ultraviolet-induced pyrimidine dimers. Biochemistry, 35, 15693-15703.
-
(1996)
Biochemistry
, vol.35
, pp. 15693-15703
-
-
Tommasi, S.1
Swiderski, P.M.2
Tu, Y.3
Kaplan, B.E.4
Pfeifer, G.P.5
-
55
-
-
24044481290
-
DNA repair in a protein-DNA complex: Searching for the key to get in
-
Kwon, Y. and Smerdon, M. J. (2005) DNA repair in a protein-DNA complex: searching for the key to get in. Mutat Res., 577, 118-130.
-
(2005)
Mutat. Res.
, vol.577
, pp. 118-130
-
-
Kwon, Y.1
Smerdon, M.J.2
-
56
-
-
0033105605
-
Tight correlation between inhibition of DNA repair in vitro and transcription factor IIIA binding in a 5S ribosomal RNA gene
-
Conconi, A., Liu, X., Koriazova, L., Ackerman, E. J. and Smerdon, M. J. (1999) Tight correlation between inhibition of DNA repair in vitro and transcription factor IIIA binding in a 5S ribosomal RNA gene. EMBO J., 18, 1387-1396.
-
(1999)
EMBO J.
, vol.18
, pp. 1387-1396
-
-
Conconi, A.1
Liu, X.2
Koriazova, L.3
Ackerman, E.J.4
Smerdon, M.J.5
-
57
-
-
0037167582
-
Protection of DNA by alpha/beta-type small, acid-soluble proteins from Bacillus subtilis spores against cytosine deamination
-
Sohail, A., Hayes, C. S., Divvela, P., Setlow, P. and Bhagwat, A. S. (2002) Protection of DNA by alpha/beta-type small, acid-soluble proteins from Bacillus subtilis spores against cytosine deamination. Biochemistry, 41, 11325-11330.
-
(2002)
Biochemistry
, vol.41
, pp. 11325-11330
-
-
Sohail, A.1
Hayes, C.S.2
Divvela, P.3
Setlow, P.4
Bhagwat, A.S.5
-
58
-
-
0026002937
-
Ultraviolet irradiation of DNA complexed with alpha/{Beta}-type small, acid-soluble proteins from spores of Bacillus or Clostidium species makes spore photoproduct but not thymine dimers
-
Nicholson, W. L., Setlow, B. and Setlow, P. (1991) Ultraviolet irradiation of DNA complexed with alpha/{Beta}-type small, acid-soluble proteins from spores of Bacillus or Clostidium species makes spore photoproduct but not thymine dimers. Proc. Natl Acad. Sci. USA, 88, 8288-8292.
-
(1991)
Proc. Natl. Acad. Sci. USA
, vol.88
, pp. 8288-8292
-
-
Nicholson, W.L.1
Setlow, B.2
Setlow, P.3
-
59
-
-
14644425512
-
Effects of the binding of alpha/beta-type small, acid-soluble spore proteins on the photochemistry of DNA in spores of Bacillus subtilis and in vitro
-
Douki, T., Setlow, B. and Setlow, P. (2005) Effects of the binding of alpha/beta-type small, acid-soluble spore proteins on the photochemistry of DNA in spores of Bacillus subtilis and in vitro. Photochem. Photobiol., 81, 163-169.
-
(2005)
Photochem. Photobiol.
, vol.81
, pp. 163-169
-
-
Douki, T.1
Setlow, B.2
Setlow, P.3
-
60
-
-
0027416683
-
Kinetic analysis of the deamination reactions of cyclobutane dimers of dTpdC and dCpdT
-
Lemaire, D. G. E. and Ruzsicska, B. P. (1993) Kinetic analysis of the deamination reactions of cyclobutane dimers of dTpdC and dCpdT. Biochemistry, 32, 2525-2533.
-
(1993)
Biochemistry
, vol.32
, pp. 2525-2533
-
-
Lemaire, D.G.E.1
Ruzsicska, B.P.2
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