-
1
-
-
5644227319
-
Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
-
10.1128/CMR.17.4.840-862.2004, 523561, 15489351
-
Clarridge JE. Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clin Microbiol Rev 2004, 17:840-862. 10.1128/CMR.17.4.840-862.2004, 523561, 15489351.
-
(2004)
Clin Microbiol Rev
, vol.17
, pp. 840-862
-
-
Clarridge, J.E.1
-
2
-
-
34548696115
-
16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory:pluses, perils, and pitfalls
-
10.1128/JCM.01228-07, 2045242, 17626177
-
Janda JM, Abbott SL. 16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory:pluses, perils, and pitfalls. J Clin Microbiol 2007, 45:2761-2764. 10.1128/JCM.01228-07, 2045242, 17626177.
-
(2007)
J Clin Microbiol
, vol.45
, pp. 2761-2764
-
-
Janda, J.M.1
Abbott, S.L.2
-
3
-
-
84856205140
-
Phylogeny in aid of the present and novel microbial lineages: Diversity in Bacillus
-
10.1371/journal.pone.0004438, 2639701, 19212464
-
Porwal S, Lal S, Cheema S, Kalia VC. Phylogeny in aid of the present and novel microbial lineages: Diversity in Bacillus. PLoS ONE 2009, 4:e4438. 10.1371/journal.pone.0004438, 2639701, 19212464.
-
(2009)
PLoS ONE
, vol.4
-
-
Porwal, S.1
Lal, S.2
Cheema, S.3
Kalia, V.C.4
-
4
-
-
77952898461
-
Ontologies in quantitative biology: A basis for comparison, integration, and discovery
-
10.1371/journal.pbio.1000374, 2876043, 20520843
-
Jensen LJ, Bork P. Ontologies in quantitative biology: A basis for comparison, integration, and discovery. PLoS Biol 2010, 8:e1000374. 10.1371/journal.pbio.1000374, 2876043, 20520843.
-
(2010)
PLoS Biol
, vol.8
-
-
Jensen, L.J.1
Bork, P.2
-
5
-
-
0029987804
-
Solvent-forming genes in clostridia
-
Cornillot E, Soucaille P. Solvent-forming genes in clostridia. Nature 1996, 380:489.
-
(1996)
Nature
, vol.380
, pp. 489
-
-
Cornillot, E.1
Soucaille, P.2
-
6
-
-
48249088897
-
Pyruvate catabolism and hydrogen synthesis pathway genes of Clostridium thermocellum ATCC 27405
-
Carere CR, Kalia V, Sparling R, Cicek N, Levin DB. Pyruvate catabolism and hydrogen synthesis pathway genes of Clostridium thermocellum ATCC 27405. Ind J Microbiol 2008, 48:252-266.
-
(2008)
Ind J Microbiol
, vol.48
, pp. 252-266
-
-
Carere, C.R.1
Kalia, V.2
Sparling, R.3
Cicek, N.4
Levin, D.B.5
-
7
-
-
48649097223
-
Third generation biofuels via direct cellulose fermentation
-
10.3390/ijms9071342, 2635718, 19325807
-
Carere CR, Sparling R, Cicek N, Levin DB. Third generation biofuels via direct cellulose fermentation. Int J Mol Sci 2008, 9:1342-1360. 10.3390/ijms9071342, 2635718, 19325807.
-
(2008)
Int J Mol Sci
, vol.9
, pp. 1342-1360
-
-
Carere, C.R.1
Sparling, R.2
Cicek, N.3
Levin, D.B.4
-
8
-
-
58149479219
-
Cellodextrin and laminaribiose ABC transporters in Clostridium thermocellum
-
10.1128/JB.01190-08, 2612431, 18952792
-
Nataf Y, Yaron S, Stahl F, Lamed R, Bayer EA, Scheper TH, Sonenshein AL, Shoham Y. Cellodextrin and laminaribiose ABC transporters in Clostridium thermocellum. J Bacteriol 2009, 191:203-209. 10.1128/JB.01190-08, 2612431, 18952792.
-
(2009)
J Bacteriol
, vol.191
, pp. 203-209
-
-
Nataf, Y.1
Yaron, S.2
Stahl, F.3
Lamed, R.4
Bayer, E.A.5
Scheper, T.H.6
Sonenshein, A.L.7
Shoham, Y.8
-
9
-
-
71849120418
-
Hydrogen production by Clostridium acetobutylicum ATCC 824 and megaplasmid-deficient mutant M5 evaluated using a large headspace volume technique
-
Oh S-E, Zuo Y, Zhang H, Guiltinan MJ, Logan BE, Regan JM. Hydrogen production by Clostridium acetobutylicum ATCC 824 and megaplasmid-deficient mutant M5 evaluated using a large headspace volume technique. Int J Hyd Ener 2009, 34:9347-9353.
-
(2009)
Int J Hyd Ener
, vol.34
, pp. 9347-9353
-
-
Oh, S.-E.1
Zuo, Y.2
Zhang, H.3
Guiltinan, M.J.4
Logan, B.E.5
Regan, J.M.6
-
10
-
-
0008654854
-
Clostridia. Biotechnology and medical applications
-
Wiley-VCH Verlag GmbH, Weinheim, Germany
-
Bahl H, Dürre P. Clostridia. Biotechnology and medical applications. 2001, Wiley-VCH Verlag GmbH, Weinheim, Germany.
-
(2001)
-
-
Bahl, H.1
Dürre, P.2
-
11
-
-
33644858397
-
Microbial conversion of glycerol to 1,3-propanediol: physiological comparison of a natural producer, Clostridium butyricum VPI 3266, and an engineered strain, Clostridium acetobutylicum DG1(pSPD5)
-
1352194, 16391030
-
González-Pajuelo M, Meynial-Salles I, Mendes F, Soucaille P, Vasconcelos I. Microbial conversion of glycerol to 1,3-propanediol: physiological comparison of a natural producer, Clostridium butyricum VPI 3266, and an engineered strain, Clostridium acetobutylicum DG1(pSPD5). Appl Environ Microbiol 2006, 72:96-101. 1352194, 16391030.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 96-101
-
-
González-Pajuelo, M.1
Meynial-Salles, I.2
Mendes, F.3
Soucaille, P.4
Vasconcelos, I.5
-
12
-
-
12244299870
-
Development and validation of PCR primers to assess the diversity of Clostridium spp. in cheese by temporal temperature gradient gel electrophoresis
-
10.1128/AEM.71.1.29-38.2005, 544257, 15640166
-
Le Bourhis A-G, Saunier K, Doré J, Carlier J-P, Chamba J-F, Popoff M-R, Tholozan J-L. Development and validation of PCR primers to assess the diversity of Clostridium spp. in cheese by temporal temperature gradient gel electrophoresis. Appl Environ Microbiol 2005, 71:29-38. 10.1128/AEM.71.1.29-38.2005, 544257, 15640166.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 29-38
-
-
Le Bourhis, A.-G.1
Saunier, K.2
Doré, J.3
Carlier, J.-P.4
Chamba, J.-F.5
Popoff, M.-R.6
Tholozan, J.-L.7
-
13
-
-
54949127535
-
Sources of Clostridia in raw milk on farms
-
10.1128/AEM.00913-08, 2570301, 18757576
-
Julien M-C, Dion P, Lafrenière C, Antoun H, Drouin P. Sources of Clostridia in raw milk on farms. Appl Environ Microbiol 2008, 74:6348-6357. 10.1128/AEM.00913-08, 2570301, 18757576.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 6348-6357
-
-
Julien, M.-C.1
Dion, P.2
Lafrenière, C.3
Antoun, H.4
Drouin, P.5
-
14
-
-
33749628473
-
Comparative phylogenomics of Clostridium difficile reveals clade specificity and microevolution of hypervirulent strains
-
10.1128/JB.00664-06, 1636221, 17015669
-
Stabler RA, Gerding DN, Songer JG, Drudy D, Brazier JS, Trinh HT, Witney AA, Hinds J, Wren BW. Comparative phylogenomics of Clostridium difficile reveals clade specificity and microevolution of hypervirulent strains. J Bacteriol 2006, 188:7297-7305. 10.1128/JB.00664-06, 1636221, 17015669.
-
(2006)
J Bacteriol
, vol.188
, pp. 7297-7305
-
-
Stabler, R.A.1
Gerding, D.N.2
Songer, J.G.3
Drudy, D.4
Brazier, J.S.5
Trinh, H.T.6
Witney, A.A.7
Hinds, J.8
Wren, B.W.9
-
15
-
-
76249088522
-
Comparative genome and phenotypic analysis of Clostridium difficile O27 strains provides insight into the evaluation of a hypervirulent bacterium
-
10.1186/gb-2009-10-9-r102, 2768977, 19781061
-
Stabler RA, He M, Dawson L, Martin M, Valiente E, Corton C, Lawley TD, Sebaihia M, Quail MA, Rose G, Gerding DN, Gibert M, Popoff MR, Parkhill J, Dougan G, Wren BW. Comparative genome and phenotypic analysis of Clostridium difficile O27 strains provides insight into the evaluation of a hypervirulent bacterium. Genome Biol 2009, 10:R102. 10.1186/gb-2009-10-9-r102, 2768977, 19781061.
-
(2009)
Genome Biol
, vol.10
-
-
Stabler, R.A.1
He, M.2
Dawson, L.3
Martin, M.4
Valiente, E.5
Corton, C.6
Lawley, T.D.7
Sebaihia, M.8
Quail, M.A.9
Rose, G.10
Gerding, D.N.11
Gibert, M.12
Popoff, M.R.13
Parkhill, J.14
Dougan, G.15
Wren, B.W.16
-
16
-
-
77956195802
-
Conjugative botulinum neurotoxin-encoding plasmids in Clostridium botulinum
-
10.1371/journal.pone.0011087, 2884020, 20552020
-
Marshall KM, Bradshaw M, Johnson EA. Conjugative botulinum neurotoxin-encoding plasmids in Clostridium botulinum. PLoS ONE 2010, 5:e11087. 10.1371/journal.pone.0011087, 2884020, 20552020.
-
(2010)
PLoS ONE
, vol.5
-
-
Marshall, K.M.1
Bradshaw, M.2
Johnson, E.A.3
-
17
-
-
33750963307
-
Identification of Clostridium species and DNA fingerprinting of Clostridium perfringens by amplified fragment length polymorphism analysis
-
10.1128/JCM.01275-06, 1698353, 16971642
-
Keto-Timonen R, Heikinheimo A, Eerola E, Korkeala H. Identification of Clostridium species and DNA fingerprinting of Clostridium perfringens by amplified fragment length polymorphism analysis. J Clin Microbiol 2006, 44:4057-4065. 10.1128/JCM.01275-06, 1698353, 16971642.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 4057-4065
-
-
Keto-Timonen, R.1
Heikinheimo, A.2
Eerola, E.3
Korkeala, H.4
-
18
-
-
34547929721
-
Characterization of an antibiotic resistant Clostridium hathewayi strain from a continuous-flow exclusion chemostat culture derived from the cecal contents of a feral pig
-
10.1016/j.anaerobe.2007.03.003, 17468020
-
Ramlachan N, Anderson RC, Andrews K, Laban G, Nisbet DJ. Characterization of an antibiotic resistant Clostridium hathewayi strain from a continuous-flow exclusion chemostat culture derived from the cecal contents of a feral pig. Anaerobe 2007, 13:153-160. 10.1016/j.anaerobe.2007.03.003, 17468020.
-
(2007)
Anaerobe
, vol.13
, pp. 153-160
-
-
Ramlachan, N.1
Anderson, R.C.2
Andrews, K.3
Laban, G.4
Nisbet, D.J.5
-
19
-
-
58249109483
-
Immunization against Clostridium perfringens cells elicits protection against Clostridium tetani in mouse model: identification of cross-reactive proteins using proteomic methodologies
-
10.1186/1471-2180-8-194, 2621373, 19000325
-
Alam SI, Bansod S, Singh L. Immunization against Clostridium perfringens cells elicits protection against Clostridium tetani in mouse model: identification of cross-reactive proteins using proteomic methodologies. BMC Microbiol 2008, 8:194. 10.1186/1471-2180-8-194, 2621373, 19000325.
-
(2008)
BMC Microbiol
, vol.8
, pp. 194
-
-
Alam, S.I.1
Bansod, S.2
Singh, L.3
-
20
-
-
77951768720
-
Comparative genomic analysis of a neurotoxigenic Clostridium species using partial genome sequence: Phylogenetic analysis of a few conserved proteins involved in cellular processes and metabolism
-
10.1016/j.anaerobe.2009.06.001, 19527791
-
Alam SI, Dixit A, Tomar A, Singh L. Comparative genomic analysis of a neurotoxigenic Clostridium species using partial genome sequence: Phylogenetic analysis of a few conserved proteins involved in cellular processes and metabolism. Anaerobe 2009, 16:147-154. 10.1016/j.anaerobe.2009.06.001, 19527791.
-
(2009)
Anaerobe
, vol.16
, pp. 147-154
-
-
Alam, S.I.1
Dixit, A.2
Tomar, A.3
Singh, L.4
-
21
-
-
65249122396
-
Sporulation and enterotoxin (CPE) synthesis are controlled by the sporulation-specific sigma factors SigE and SigK in Clostridium perfringens
-
10.1128/JB.01839-08, 2668419, 19201796
-
Harry K, Zhou R, Kroos L, Melville SB. Sporulation and enterotoxin (CPE) synthesis are controlled by the sporulation-specific sigma factors SigE and SigK in Clostridium perfringens. J Bacteriol 2009, 191:2728-2742. 10.1128/JB.01839-08, 2668419, 19201796.
-
(2009)
J Bacteriol
, vol.191
, pp. 2728-2742
-
-
Harry, K.1
Zhou, R.2
Kroos, L.3
Melville, S.B.4
-
22
-
-
66149146645
-
Clostridium difficile in ready-to-eat salads, Scotland
-
10.3201/eid1505.081186, 2687046, 19402979
-
Bakri MM, Brown DJ, Butcher JP, Sutherland AD. Clostridium difficile in ready-to-eat salads, Scotland. Emerg Infect Dis 2009, 15:817-818. 10.3201/eid1505.081186, 2687046, 19402979.
-
(2009)
Emerg Infect Dis
, vol.15
, pp. 817-818
-
-
Bakri, M.M.1
Brown, D.J.2
Butcher, J.P.3
Sutherland, A.D.4
-
23
-
-
33747173404
-
Comparative analysis of prevalence, risk factors, and molecular epidemiology of antibiotic-associated diarrhea due to Clostridium difficile, Clostridium perfringens, and Staphylococcus aureus
-
10.1128/JCM.00165-06, 1594656, 16891493
-
Asha NJ, Tompkins D, Wilcox MH. Comparative analysis of prevalence, risk factors, and molecular epidemiology of antibiotic-associated diarrhea due to Clostridium difficile, Clostridium perfringens, and Staphylococcus aureus. J Clin Microbiol 2006, 44:2785-2791. 10.1128/JCM.00165-06, 1594656, 16891493.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 2785-2791
-
-
Asha, N.J.1
Tompkins, D.2
Wilcox, M.H.3
-
24
-
-
0036467063
-
Health care costs and mortality associated with nosocomial diarrhea due to Clostridium difficile
-
10.1086/338260, 11774082
-
Kyne L, Hamel MB, Polavaram R, Kelly CP. Health care costs and mortality associated with nosocomial diarrhea due to Clostridium difficile. Clin Infect Dis 2002, 34:346-353. 10.1086/338260, 11774082.
-
(2002)
Clin Infect Dis
, vol.34
, pp. 346-353
-
-
Kyne, L.1
Hamel, M.B.2
Polavaram, R.3
Kelly, C.P.4
-
25
-
-
0035196515
-
Emended descriptions of Clostridium acetobutylicum and Clostridium beijerinckii, and descriptions of Clostridium saccharoperbutylacetonicum sp. nov. and Clostridium saccharobutylicum sp. nov
-
Keis S, Shaheen R, Jones DT. Emended descriptions of Clostridium acetobutylicum and Clostridium beijerinckii, and descriptions of Clostridium saccharoperbutylacetonicum sp. nov. and Clostridium saccharobutylicum sp. nov. Int J Syst Evol Microbiol 2001, 51:2095-2103.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 2095-2103
-
-
Keis, S.1
Shaheen, R.2
Jones, D.T.3
-
26
-
-
0000770675
-
Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
-
Wayne LG, Brenner DJ, Colwell RR, Grimont PAD, Kandler O, Krichevsky MI, Moore LH, Moore WEC, Murray RGE, Stackebrandt E, Starr MP, Truper HG. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 1987, 37:463-464.
-
(1987)
Int J Syst Bacteriol
, vol.37
, pp. 463-464
-
-
Wayne, L.G.1
Brenner, D.J.2
Colwell, R.R.3
Grimont, P.A.D.4
Kandler, O.5
Krichevsky, M.I.6
Moore, L.H.7
Moore, W.E.C.8
Murray, R.G.E.9
Stackebrandt, E.10
Starr, M.P.11
Truper, H.G.12
-
27
-
-
0029907539
-
An introduction to hows and whys of molecular typing
-
Farber JM. An introduction to hows and whys of molecular typing. J Food Prot 1996, 59:1091-1101.
-
(1996)
J Food Prot
, vol.59
, pp. 1091-1101
-
-
Farber, J.M.1
-
28
-
-
51149115702
-
Phylogenetic analysis of Clostridium botulinum type A by multi-locus sequence typing
-
Jacobson MJ, Lin G, Whittam TS, Johnson EA. Phylogenetic analysis of Clostridium botulinum type A by multi-locus sequence typing. Microbiol 2008, 154:2408-2415.
-
(2008)
Microbiol
, vol.154
, pp. 2408-2415
-
-
Jacobson, M.J.1
Lin, G.2
Whittam, T.S.3
Johnson, E.A.4
-
29
-
-
0031959006
-
Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology
-
10.1023/A:1000669317571, 9602286
-
Muyzer G, Smalla K. Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie van Leeuwenhoek 1998, 73:127-141. 10.1023/A:1000669317571, 9602286.
-
(1998)
Antonie van Leeuwenhoek
, vol.73
, pp. 127-141
-
-
Muyzer, G.1
Smalla, K.2
-
30
-
-
0348111478
-
The late blowing in cheese: a new molecular approach based on PCR and DGGE to study the microbial ecology of the alteration process
-
10.1016/S0168-1605(03)00296-4, 14672833
-
Cocolin L, Innocente N, Biasutti M, Comi G. The late blowing in cheese: a new molecular approach based on PCR and DGGE to study the microbial ecology of the alteration process. Int J Food Microbiol 2004, 90:83-91. 10.1016/S0168-1605(03)00296-4, 14672833.
-
(2004)
Int J Food Microbiol
, vol.90
, pp. 83-91
-
-
Cocolin, L.1
Innocente, N.2
Biasutti, M.3
Comi, G.4
-
31
-
-
34547180289
-
A general framework for designing and validating oligomer-based DNA microarrays and its application to Clostridium acetobutylicum
-
10.1128/AEM.00144-07, 1932840, 17526797
-
Paredes CJ, Senger RS, Spath IS, Borden JR, Sillers R, Papoutsakis ET. A general framework for designing and validating oligomer-based DNA microarrays and its application to Clostridium acetobutylicum. Appl Environ Microbiol 2007, 73:4631-4638. 10.1128/AEM.00144-07, 1932840, 17526797.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 4631-4638
-
-
Paredes, C.J.1
Senger, R.S.2
Spath, I.S.3
Borden, J.R.4
Sillers, R.5
Papoutsakis, E.T.6
-
32
-
-
0027884842
-
Genetic interrelationships of proteolytic Clostridium botulinum type A, B, and F and other members of the Clostridium botulimun complex as revealed by small-subunit rRNA gene sequences
-
10.1007/BF00873087, 8085790
-
Hutson RA, Thompson DE, Lawson PA, Schocken-Illturino RP, Böttger EC, Collins MD. Genetic interrelationships of proteolytic Clostridium botulinum type A, B, and F and other members of the Clostridium botulimun complex as revealed by small-subunit rRNA gene sequences. Antonie van Leeuwenhoek 1993, 64:273-283. 10.1007/BF00873087, 8085790.
-
(1993)
Antonie van Leeuwenhoek
, vol.64
, pp. 273-283
-
-
Hutson, R.A.1
Thompson, D.E.2
Lawson, P.A.3
Schocken-Illturino, R.P.4
Böttger, E.C.5
Collins, M.D.6
-
33
-
-
0028334234
-
Comparison of restriction endonuclease analysis, ribotyping, and pulsed-field gel electrophoresis for molecular differentiation of Clostridium difficile strains
-
263911, 7989550
-
Kristjansson M, Samore MH, Gerding DN, DeGirolarni PC, Bettin KM, Karchmer AW, Arbeit RD. Comparison of restriction endonuclease analysis, ribotyping, and pulsed-field gel electrophoresis for molecular differentiation of Clostridium difficile strains. J Clin Microbiol 1994, 32:1963-1969. 263911, 7989550.
-
(1994)
J Clin Microbiol
, vol.32
, pp. 1963-1969
-
-
Kristjansson, M.1
Samore, M.H.2
Gerding, D.N.3
DeGirolarni, P.C.4
Bettin, K.M.5
Karchmer, A.W.6
Arbeit, R.D.7
-
34
-
-
0034980378
-
Clostridium felsineum and Clostridium acetobutylicum are two distinct species that are phylogenetically closely related
-
Tamburini E, Daly S, Steiner U, Vandini C, Mastromei G. Clostridium felsineum and Clostridium acetobutylicum are two distinct species that are phylogenetically closely related. Int J Syst Evol Microbiol 2001, 51:963-966.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 963-966
-
-
Tamburini, E.1
Daly, S.2
Steiner, U.3
Vandini, C.4
Mastromei, G.5
-
35
-
-
0028126829
-
The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations
-
10.1099/00207713-44-4-812, 7981107
-
Collins MD, Lawson PA, Willems A, Cordoba JJ, Fernandez-Garayzabal J, Garcia P, Cai J, Hippe H, Farrow JA. The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations. Int J Syst Bacteriol 1994, 44:812-826. 10.1099/00207713-44-4-812, 7981107.
-
(1994)
Int J Syst Bacteriol
, vol.44
, pp. 812-826
-
-
Collins, M.D.1
Lawson, P.A.2
Willems, A.3
Cordoba, J.J.4
Fernandez-Garayzabal, J.5
Garcia, P.6
Cai, J.7
Hippe, H.8
Farrow, J.A.9
-
36
-
-
0034902930
-
Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum
-
99537, 11466286, GTC Sequencing Center Production, Finishing and Bioinfromatics Teams
-
Nölling J, Breton G, Omelchenko MV, Makarova KS, Zeng Q, Gibson R, Lee HM, Dubois J, Qiu D, Hitti J, Wolf YI, Tatusov RL, Sabathe F, Doucette-Stamm L, Soucaille P, Daly MJ, Bennett GN, Koonin EV, Smith DR. GTC Sequencing Center Production, Finishing and Bioinfromatics Teams Genome sequence and comparative analysis of the solvent-producing bacterium Clostridium acetobutylicum. J Bacteriol 2001, 183:4823-4838. 99537, 11466286, GTC Sequencing Center Production, Finishing and Bioinfromatics Teams.
-
(2001)
J Bacteriol
, vol.183
, pp. 4823-4838
-
-
Nölling, J.1
Breton, G.2
Omelchenko, M.V.3
Makarova, K.S.4
Zeng, Q.5
Gibson, R.6
Lee, H.M.7
Dubois, J.8
Qiu, D.9
Hitti, J.10
Wolf, Y.I.11
Tatusov, R.L.12
Sabathe, F.13
Doucette-Stamm, L.14
Soucaille, P.15
Daly, M.J.16
Bennett, G.N.17
Koonin, E.V.18
Smith, D.R.19
-
37
-
-
33846193155
-
Insight in to the phylogeny of polyhydroxyalkanoate biosynthesis: horizontal gene transfer
-
10.1016/j.gene.2006.09.010, 17113245
-
Kalia VC, Lal S, Cheema S. Insight in to the phylogeny of polyhydroxyalkanoate biosynthesis: horizontal gene transfer. Gene 2006, 389:19-26. 10.1016/j.gene.2006.09.010, 17113245.
-
(2006)
Gene
, vol.389
, pp. 19-26
-
-
Kalia, V.C.1
Lal, S.2
Cheema, S.3
-
38
-
-
48349090342
-
Phylogeny vs genome reshuffling: Horizontal gene transfer
-
Lal S, Cheema S, Kalia VC. Phylogeny vs genome reshuffling: Horizontal gene transfer. Ind J Microbiol 2008, 48:228-242.
-
(2008)
Ind J Microbiol
, vol.48
, pp. 228-242
-
-
Lal, S.1
Cheema, S.2
Kalia, V.C.3
-
39
-
-
33846603341
-
Bacillus subtilis genome diversity
-
10.1128/JB.01343-06, 1797320, 17114265
-
Earl AM, Losick R, Kolter R. Bacillus subtilis genome diversity. J Bacteriol 2007, 189:1163-1170. 10.1128/JB.01343-06, 1797320, 17114265.
-
(2007)
J Bacteriol
, vol.189
, pp. 1163-1170
-
-
Earl, A.M.1
Losick, R.2
Kolter, R.3
-
40
-
-
4544264417
-
Binary bacterial toxins: biochemistry, biology and applications of common Clostridium and Bacillus proteins
-
Barth H, Aktories K, Popoff MR, Stiles BG. Binary bacterial toxins: biochemistry, biology and applications of common Clostridium and Bacillus proteins. Microbiol Mol Biol Revs 2004, 68:373-402.
-
(2004)
Microbiol Mol Biol Revs
, vol.68
, pp. 373-402
-
-
Barth, H.1
Aktories, K.2
Popoff, M.R.3
Stiles, B.G.4
-
41
-
-
0016795666
-
Taxonomy of the clostridia: ribosomal ribonucleic acid homologies among the species
-
Johnson JL, Francis BS. Taxonomy of the clostridia: ribosomal ribonucleic acid homologies among the species. J Gen Microbiol 1975, 88:229-244.
-
(1975)
J Gen Microbiol
, vol.88
, pp. 229-244
-
-
Johnson, J.L.1
Francis, B.S.2
-
42
-
-
0027504545
-
Towards a phylogeny of the clostridia based on 16S rRNA sequences
-
10.1111/j.1574-6968.1993.tb06493.x, 8243988
-
Lawson PA, Llop-Perez P, Hutson RA, Hippe H, Collins MD. Towards a phylogeny of the clostridia based on 16S rRNA sequences. FEMS Microbiol Lett 1993, 113:87-92. 10.1111/j.1574-6968.1993.tb06493.x, 8243988.
-
(1993)
FEMS Microbiol Lett
, vol.113
, pp. 87-92
-
-
Lawson, P.A.1
Llop-Perez, P.2
Hutson, R.A.3
Hippe, H.4
Collins, M.D.5
-
43
-
-
0036022428
-
Clostridium phytofermentans sp. nov., a cellulolytic mesophile from forest soil
-
10.1099/ijs.0.02125-0, 12148621
-
Warnick TA, Methe BA, Leschine SB. Clostridium phytofermentans sp. nov., a cellulolytic mesophile from forest soil. Int J Syst Evol Microbiol 2002, 52:1155-1160. 10.1099/ijs.0.02125-0, 12148621.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 1155-1160
-
-
Warnick, T.A.1
Methe, B.A.2
Leschine, S.B.3
-
44
-
-
15044349638
-
Clostridium bacteraemia characterised by 16S ribosomal RNA gene sequencing
-
10.1136/jcp.2004.022830, 1770585, 15735165
-
Woo PCY, Lau SKP, Chan K-M, Fung AMY, Tang BSF, Yuen K-Y. Clostridium bacteraemia characterised by 16S ribosomal RNA gene sequencing. J Clin Pathol 2005, 58:301-307. 10.1136/jcp.2004.022830, 1770585, 15735165.
-
(2005)
J Clin Pathol
, vol.58
, pp. 301-307
-
-
Woo, P.C.Y.1
Lau, S.K.P.2
Chan, K.-M.3
Fung, A.M.Y.4
Tang, B.S.F.5
Yuen, K.-Y.6
-
45
-
-
17544395541
-
Reclassification of Clostridium quercicolum as Dendrosporobacter quercicolus gen. nov., comb. nov
-
Strömpl C, Tindall BJ, Lünsdorf H, Wong T-Y, Moore ERB, Hippe H. Reclassification of Clostridium quercicolum as Dendrosporobacter quercicolus gen. nov., comb. nov. Int J Syst Evol Microbiol 2000, 50:101-106.
-
(2000)
Int J Syst Evol Microbiol
, vol.50
, pp. 101-106
-
-
Strömpl, C.1
Tindall, B.J.2
Lünsdorf, H.3
Wong, T.-Y.4
Moore, E.R.B.5
Hippe, H.6
-
46
-
-
0028889638
-
Taxonomy and phylogeny of industrial solvent-producing Clostridia
-
10.1099/00207713-45-4-693, 7547288
-
Keis S, Bennett CF, Ward VK, Jones DT. Taxonomy and phylogeny of industrial solvent-producing Clostridia. Int J Syst Bacteriol 1995, 45:693-705. 10.1099/00207713-45-4-693, 7547288.
-
(1995)
Int J Syst Bacteriol
, vol.45
, pp. 693-705
-
-
Keis, S.1
Bennett, C.F.2
Ward, V.K.3
Jones, D.T.4
-
47
-
-
0020321363
-
A phylogenetic analysis of anaerobic eubacteria capable of synthesizing acetate from carbon dioxide
-
Tanner RS, Stackebrandt E, Fox GE, Gupta R, Magrum LJ, Woese CR. A phylogenetic analysis of anaerobic eubacteria capable of synthesizing acetate from carbon dioxide. Curr Microbiol 1982, 7:127-132.
-
(1982)
Curr Microbiol
, vol.7
, pp. 127-132
-
-
Tanner, R.S.1
Stackebrandt, E.2
Fox, G.E.3
Gupta, R.4
Magrum, L.J.5
Woese, C.R.6
-
48
-
-
0015338464
-
Clostridium barkeri sp. nov
-
247476, 4553843
-
Stadtman ER, Stadtman TC, Pastan I, Smith LDS. Clostridium barkeri sp. nov. J Bacteriol 1972, 110:758-760. 247476, 4553843.
-
(1972)
J Bacteriol
, vol.110
, pp. 758-760
-
-
Stadtman, E.R.1
Stadtman, T.C.2
Pastan, I.3
Smith, L.D.S.4
-
49
-
-
77954309106
-
Evaluation of genetic and functional diversity of Stenotrophomonas isolates from diverse effluent treatment plants
-
Verma V, Raju SC, Kapley A, Kalia VC, Purohit HJ. Evaluation of genetic and functional diversity of Stenotrophomonas isolates from diverse effluent treatment plants. Biores Technol 2010, 101:7744-7753.
-
(2010)
Biores Technol
, vol.101
, pp. 7744-7753
-
-
Verma, V.1
Raju, S.C.2
Kapley, A.3
Kalia, V.C.4
Purohit, H.J.5
-
50
-
-
15444379156
-
Efficient DNA fingerprinting of Clostridium botulinum types A, B, E, and F by amplified fragment length polymorphism analysis
-
10.1128/AEM.71.3.1148-1154.2005, 1065150, 15746312
-
Keto-Timonen R, Nevas M, Korkeala H. Efficient DNA fingerprinting of Clostridium botulinum types A, B, E, and F by amplified fragment length polymorphism analysis. Appl Environ Microbiol 2005, 71:1148-1154. 10.1128/AEM.71.3.1148-1154.2005, 1065150, 15746312.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 1148-1154
-
-
Keto-Timonen, R.1
Nevas, M.2
Korkeala, H.3
-
51
-
-
0028932760
-
Rejection of Clostridium putrificum and conservation of Clostridium botulinum and Clostridium sporogenes request for an opinion
-
Olsen I, Johnson JL, Moore LVH, Moore WEC. Rejection of Clostridium putrificum and conservation of Clostridium botulinum and Clostridium sporogenes request for an opinion. Int J Syst Bacteriol 1995, 45:414.
-
(1995)
Int J Syst Bacteriol
, vol.45
, pp. 414
-
-
Olsen, I.1
Johnson, J.L.2
Moore, L.V.H.3
Moore, W.E.C.4
-
52
-
-
63449115868
-
Phylogenomic analyses of clostridia and identification of novel protein signatures that are specific to the genus Clostridium sensu stricto (cluster I)
-
10.1099/ijs.0.001792-0, 19196767
-
Gupta RS, Gao B. Phylogenomic analyses of clostridia and identification of novel protein signatures that are specific to the genus Clostridium sensu stricto (cluster I). Int J Syst Evol Microbiol 2009, 59:285-294. 10.1099/ijs.0.001792-0, 19196767.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 285-294
-
-
Gupta, R.S.1
Gao, B.2
-
53
-
-
0345004971
-
Ribotyping as an identification tool for Clostridium botulinum strains causing human botulism
-
10.1016/S0168-1605(99)00024-0, 10357280
-
Hielm S, Björkroth J, Hyytiä E, Korkeala H. Ribotyping as an identification tool for Clostridium botulinum strains causing human botulism. Int J Food Microbiol 1999, 47:121-131. 10.1016/S0168-1605(99)00024-0, 10357280.
-
(1999)
Int J Food Microbiol
, vol.47
, pp. 121-131
-
-
Hielm, S.1
Björkroth, J.2
Hyytiä, E.3
Korkeala, H.4
-
54
-
-
0345120860
-
Characterisation of Clostridium botulinum groups I and II by randomly amplified polymorphic DNA analysis and repetitive element sequence-based PCR
-
Hyytiä E, Björkroth J, Hielm S, Korkeala H. Characterisation of Clostridium botulinum groups I and II by randomly amplified polymorphic DNA analysis and repetitive element sequence-based PCR. Int J Food Microbiol 1999, 48:179-189.
-
(1999)
Int J Food Microbiol
, vol.48
, pp. 179-189
-
-
Hyytiä, E.1
Björkroth, J.2
Hielm, S.3
Korkeala, H.4
-
55
-
-
0018974560
-
The phylogeny of prokaryotes
-
10.1126/science.6771870, 6771870
-
Fox GE, Stackebrandt E, Hespell RB, Gibson J, Maniloff J, Dyer TA, Wolfe RS, Balch WE, Tanner RS, Magrum LJ, Zablen LB, Blakemore R, Gupta R, Bonen L, Lewis BJ, Stahl DA, Luehrsen KR, Chen KN, Woese CR. The phylogeny of prokaryotes. Science 1980, 209:457-463. 10.1126/science.6771870, 6771870.
-
(1980)
Science
, vol.209
, pp. 457-463
-
-
Fox, G.E.1
Stackebrandt, E.2
Hespell, R.B.3
Gibson, J.4
Maniloff, J.5
Dyer, T.A.6
Wolfe, R.S.7
Balch, W.E.8
Tanner, R.S.9
Magrum, L.J.10
Zablen, L.B.11
Blakemore, R.12
Gupta, R.13
Bonen, L.14
Lewis, B.J.15
Stahl, D.A.16
Luehrsen, K.R.17
Chen, K.N.18
Woese, C.R.19
-
56
-
-
34547658482
-
An introduction to the family Clostridiaceae
-
Springer, New York, Dworkin M, Falkow S, Rosenberg E, Schleifer KH, Stackebrandt E, 3
-
Wiegel J, Tanner R, Rainey F. An introduction to the family Clostridiaceae. The prokaryotes 2006, 4:654-678. Springer, New York, Dworkin M, Falkow S, Rosenberg E, Schleifer KH, Stackebrandt E, 3.
-
(2006)
The prokaryotes
, vol.4
, pp. 654-678
-
-
Wiegel, J.1
Tanner, R.2
Rainey, F.3
-
57
-
-
0036823706
-
Taxonomy - general comments and update on taxonomy of clostridia and anaerobic cocci
-
10.1006/anae.2002.0436, 16887670
-
Finegold SM, Song Y, Liu C. Taxonomy - general comments and update on taxonomy of clostridia and anaerobic cocci. Anaerobe 2002, 8:283-285. 10.1006/anae.2002.0436, 16887670.
-
(2002)
Anaerobe
, vol.8
, pp. 283-285
-
-
Finegold, S.M.1
Song, Y.2
Liu, C.3
-
58
-
-
54749125057
-
Reclassification of Clostridium coccoides, Ruminococcus hansenii, Ruminococcus hydrogenotrophicus, Ruminococcus luti, Ruminococcus productus and Ruminococcus schinkii as Blautia coccoides gen. nov., comb. nov., Blautia hansenii comb. nov., Blautia hydrogenotrophica comb. nov., Blautia luti comb. nov., Blautia producta comb. nov., Blautia schinkii comb. nov. and description of Blautia wexlerae sp.
-
10.1099/ijs.0.65208-0, 18676476
-
Liu C, Finegold SM, Song Y, Lawson PA. Reclassification of Clostridium coccoides, Ruminococcus hansenii, Ruminococcus hydrogenotrophicus, Ruminococcus luti, Ruminococcus productus and Ruminococcus schinkii as Blautia coccoides gen. nov., comb. nov., Blautia hansenii comb. nov., Blautia hydrogenotrophica comb. nov., Blautia luti comb. nov., Blautia producta comb. nov., Blautia schinkii comb. nov. and description of Blautia wexlerae sp. nov., isolated from human faeces. Int J Syst Evol Microbiol 2008, 58:1896-1902. 10.1099/ijs.0.65208-0, 18676476.
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 1896-1902
-
-
Liu, C.1
Finegold, S.M.2
Song, Y.3
Lawson, P.A.4
-
59
-
-
0036444495
-
A single phylogenetic analysis of Bacillus thuringiensis strains and bacilli species inferred from 16S rRNA gene restriction fragment length polymorphism is congruent with two independent phylogenetic analyses
-
10.1046/j.1365-2672.2002.01788.x, 12452965
-
Joung KB, Cote JC. A single phylogenetic analysis of Bacillus thuringiensis strains and bacilli species inferred from 16S rRNA gene restriction fragment length polymorphism is congruent with two independent phylogenetic analyses. J Appl Microbiol 2002, 93:1075-1082. 10.1046/j.1365-2672.2002.01788.x, 12452965.
-
(2002)
J Appl Microbiol
, vol.93
, pp. 1075-1082
-
-
Joung, K.B.1
Cote, J.C.2
-
60
-
-
0035064602
-
Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp nov and Geobacillus uzenensis sp nov from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermoglucosidasius and Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearot
-
Nazina TN, Tourova TP, Poltaraus AB, Novikova EV, Grigoryan AA, Ivanova AE, Lysenko AM, Petrunyaka VV, Osipov GA, Belyaev SS, Ivanov MV. Taxonomic study of aerobic thermophilic bacilli: descriptions of Geobacillus subterraneus gen. nov., sp nov and Geobacillus uzenensis sp nov from petroleum reservoirs and transfer of Bacillus stearothermophilus, Bacillus thermocatenulatus, Bacillus thermoleovorans, Bacillus kaustophilus, Bacillus thermoglucosidasius and Bacillus thermodenitrificans to Geobacillus as the new combinations G. stearothermophilus, G. thermocatenulatus, G. thermoleovorans, G. kaustophilus, G. thermoglucosidasius and G. thermodenitrificans. Int J Syst Evol Microbiol 2001, 51:433-446.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 433-446
-
-
Nazina, T.N.1
Tourova, T.P.2
Poltaraus, A.B.3
Novikova, E.V.4
Grigoryan, A.A.5
Ivanova, A.E.6
Lysenko, A.M.7
Petrunyaka, V.V.8
Osipov, G.A.9
Belyaev, S.S.10
Ivanov, M.V.11
-
61
-
-
0034991394
-
Sporosarcina aquimarina sp. nov., a bacterium isolated from seawater in Korea, and transfer of Bacillus globisporus (Larkin and Stokes 1967), Bacillus psychrophilus (Nakamura 1984) and Bacillus pasteurii (Chester 1898) to the genus Sporosarcina as Sporosarcina globispora comb. nov., Sporosarcina psychrophila comb. nov. and Sporosarcina pasteurii comb. nov. and emended description of the genus Spor
-
Yoon JH, Lee KC, Weiss N, Kho YH, Kang KH, Park YH. Sporosarcina aquimarina sp. nov., a bacterium isolated from seawater in Korea, and transfer of Bacillus globisporus (Larkin and Stokes 1967), Bacillus psychrophilus (Nakamura 1984) and Bacillus pasteurii (Chester 1898) to the genus Sporosarcina as Sporosarcina globispora comb. nov., Sporosarcina psychrophila comb. nov. and Sporosarcina pasteurii comb. nov. and emended description of the genus Sporosarcina. Int J Syst Evol Microbiol 2001, 51:1079-1086.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 1079-1086
-
-
Yoon, J.H.1
Lee, K.C.2
Weiss, N.3
Kho, Y.H.4
Kang, K.H.5
Park, Y.H.6
-
62
-
-
0035192352
-
Jeotgalibacillus alimentarius gen. nov., sp. nov., a novel bacterium isolated from jeotgal with L-lysine in the cell wall, and reclassification of Bacillus marinus Rüger 1983 as Marinibacillus marinus gen. nov., comb. nov
-
Yoon JH, Weiss N, Lee KC, Lee IS, Kang KH, Park YH. Jeotgalibacillus alimentarius gen. nov., sp. nov., a novel bacterium isolated from jeotgal with L-lysine in the cell wall, and reclassification of Bacillus marinus Rüger 1983 as Marinibacillus marinus gen. nov., comb. nov. Int J Syst Evol Microbiol 2001, 51:2087-2093.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 2087-2093
-
-
Yoon, J.H.1
Weiss, N.2
Lee, K.C.3
Lee, I.S.4
Kang, K.H.5
Park, Y.H.6
-
63
-
-
0035989443
-
Reclassification of Clostridium hydroxybenzoicum as Sedimentibacter hydroxybenzoicus gen. nov., comb. nov., and description of Sedimentibacter saalensis sp. nov
-
10.1099/ijs.0.01998-0, 12054241
-
Breitenstein A, Wiegel J, Haertig C, Weiss N, Andreesen JR, Lechner U. Reclassification of Clostridium hydroxybenzoicum as Sedimentibacter hydroxybenzoicus gen. nov., comb. nov., and description of Sedimentibacter saalensis sp. nov. Int J Syst Evol Microbiol 2002, 52:801-807. 10.1099/ijs.0.01998-0, 12054241.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 801-807
-
-
Breitenstein, A.1
Wiegel, J.2
Haertig, C.3
Weiss, N.4
Andreesen, J.R.5
Lechner, U.6
-
64
-
-
26244461228
-
Clostridium carboxidivorans sp. nov., a solvent-producing Clostridium isolated from an agricultural settling lagoon, and reclassification of the acetogen Clostridium scatologenes strain SL1 as Clostridium drakei sp. nov
-
10.1099/ijs.0.63482-0, 16166714
-
Liou JS-C, Balkwill DL, Drake GR, Tanner RS. Clostridium carboxidivorans sp. nov., a solvent-producing Clostridium isolated from an agricultural settling lagoon, and reclassification of the acetogen Clostridium scatologenes strain SL1 as Clostridium drakei sp. nov. Int J Syst Evol Microbiol 2005, 55:2085-2091. 10.1099/ijs.0.63482-0, 16166714.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 2085-2091
-
-
Liou, J.S.-C.1
Balkwill, D.L.2
Drake, G.R.3
Tanner, R.S.4
-
65
-
-
0025119577
-
Stability of solvent production by Clostridium acetobutylicum in continuous culture: strain differences
-
Woolley RC, Morris JG. Stability of solvent production by Clostridium acetobutylicum in continuous culture: strain differences. J Appl Bacteriol 1990, 69:718-728.
-
(1990)
J Appl Bacteriol
, vol.69
, pp. 718-728
-
-
Woolley, R.C.1
Morris, J.G.2
-
66
-
-
0027154152
-
Wide diversity of genome size among different strains of Clostridium acetobutylicum
-
Wilkinson SR, Young M. Wide diversity of genome size among different strains of Clostridium acetobutylicum. J Gen Microbiol 1993, 139:1069-1076.
-
(1993)
J Gen Microbiol
, vol.139
, pp. 1069-1076
-
-
Wilkinson, S.R.1
Young, M.2
-
67
-
-
20444452086
-
Characterization of Clostridium botulinum strains associated with an infant botulism case in the United Kingdom
-
10.1128/JCM.43.6.2602-2607.2005, 1151885, 15956371
-
Johnson EA, Tepp WH, Bradshaw M, Gilbert RJ, Cook PE, McIntosh EDG. Characterization of Clostridium botulinum strains associated with an infant botulism case in the United Kingdom. J Clin Microbiol 2005, 43:2602-2607. 10.1128/JCM.43.6.2602-2607.2005, 1151885, 15956371.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 2602-2607
-
-
Johnson, E.A.1
Tepp, W.H.2
Bradshaw, M.3
Gilbert, R.J.4
Cook, P.E.5
McIntosh, E.D.G.6
-
68
-
-
0025994430
-
Identification of Clostridiurn botulinurn, Clostridium argentinense, and related organisms by cellular fatty acid analysis
-
269954, 1864927
-
Ghanem FM, Ridpath AC, Moore WEC, Moore LVH. Identification of Clostridiurn botulinurn, Clostridium argentinense, and related organisms by cellular fatty acid analysis. J Clin Microbiol 1991, 29:1114-1124. 269954, 1864927.
-
(1991)
J Clin Microbiol
, vol.29
, pp. 1114-1124
-
-
Ghanem, F.M.1
Ridpath, A.C.2
Moore, W.E.C.3
Moore, L.V.H.4
-
69
-
-
0041810378
-
Characterization of novel psychrophilic clostridia from an Antarctic microbial mat: description of Clostridium frigoris sp. nov., Clostridium lacusfryxellense sp. nov., Clostridium bowmanii sp. nov. and Clostridium psychrophilum sp. nov. and reclassification of Clostridium laramiense as Clostridium estertheticum subsp. Laramiense subsp. nov
-
10.1099/ijs.0.02554-0, 12892121
-
Spring S, Merkhoffer B, Weiss N, Kroppenstedt RM, Hippe H, Stackebrandt E. Characterization of novel psychrophilic clostridia from an Antarctic microbial mat: description of Clostridium frigoris sp. nov., Clostridium lacusfryxellense sp. nov., Clostridium bowmanii sp. nov. and Clostridium psychrophilum sp. nov. and reclassification of Clostridium laramiense as Clostridium estertheticum subsp. Laramiense subsp. nov. Int J Syst Evol Microbiol 2003, 53:1019-1029. 10.1099/ijs.0.02554-0, 12892121.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 1019-1029
-
-
Spring, S.1
Merkhoffer, B.2
Weiss, N.3
Kroppenstedt, R.M.4
Hippe, H.5
Stackebrandt, E.6
-
70
-
-
33847177680
-
Clostridium aciditolerans sp. nov., an acid-tolerant spore-forming anaerobic bacterium from constructed wetland sediment
-
10.1099/ijs.0.64583-0, 17267970
-
Lee Y-J, Romanek CS, Wiegel J. Clostridium aciditolerans sp. nov., an acid-tolerant spore-forming anaerobic bacterium from constructed wetland sediment. Int J Syst Evol Microbiol 2007, 57:311-315. 10.1099/ijs.0.64583-0, 17267970.
-
(2007)
Int J Syst Evol Microbiol
, vol.57
, pp. 311-315
-
-
Lee, Y.-J.1
Romanek, C.S.2
Wiegel, J.3
-
71
-
-
0034980377
-
Phylogenetic positions of Clostridium novyi and Clostridium haemolyticum based on 16S rDNA sequences
-
Sasaki Y, Takikawa N, Kojima A, Norimatsu M, Suzuki S, Tamura Y. Phylogenetic positions of Clostridium novyi and Clostridium haemolyticum based on 16S rDNA sequences. Int J Syst Evol Microbiol 2001, 51:901-904.
-
(2001)
Int J Syst Evol Microbiol
, vol.51
, pp. 901-904
-
-
Sasaki, Y.1
Takikawa, N.2
Kojima, A.3
Norimatsu, M.4
Suzuki, S.5
Tamura, Y.6
-
72
-
-
84981835558
-
The classification and biochemical activities of the genus Clostridium
-
Oakley CL. The classification and biochemical activities of the genus Clostridium. J Appl Bacteriol 1956, 19:112-116.
-
(1956)
J Appl Bacteriol
, vol.19
, pp. 112-116
-
-
Oakley, C.L.1
-
73
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
10.1093/bioinformatics/btm404, 17846036
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, et al. Clustal W and Clustal X version 2.0. Bioinformatics 2007, 23:2947-2948. 10.1093/bioinformatics/btm404, 17846036.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
-
74
-
-
78751594991
-
Felsenstein J Phylip (Phylogeny Inference Package) version 3.57c
-
Department of Genetics, University of Washington, Seattle
-
Felsenstein J Phylip (Phylogeny Inference Package) version 3.57c. 1993, Department of Genetics, University of Washington, Seattle., http://evolution.genetics.washington.edu/phylip.html
-
(1993)
-
-
-
75
-
-
0030203863
-
TreeView: an application to display phylogenetic trees on personal computer
-
Page RDM. TreeView: an application to display phylogenetic trees on personal computer. Comput Appl Biosci 1996, 12:357-358.
-
(1996)
Comput Appl Biosci
, vol.12
, pp. 357-358
-
-
Page, R.D.M.1
-
76
-
-
0034525575
-
PhyloDraw: a phylogenetic tree drawing system
-
10.1093/bioinformatics/16.11.1056, 11159323
-
Choi JH, Jung HY, Kim HS, Cho HG. PhyloDraw: a phylogenetic tree drawing system. Bioinformatics 2000, 16:1056-8. 10.1093/bioinformatics/16.11.1056, 11159323.
-
(2000)
Bioinformatics
, vol.16
, pp. 1056-1058
-
-
Choi, J.H.1
Jung, H.Y.2
Kim, H.S.3
Cho, H.G.4
-
77
-
-
34547781750
-
MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
-
10.1093/molbev/msm092, 17488738
-
Tamura K, Dudley J, Nei M, Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 2007, 24:1596-1599. 10.1093/molbev/msm092, 17488738.
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
78
-
-
0028685490
-
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
-
AAAI Press, Menlo Park, CA, Altman RB, Brutlag DL, Karp PD, Lathrop RH, Searls DB
-
Bailey TL, Elkan C. Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology 1994, 28-36. AAAI Press, Menlo Park, CA, Altman RB, Brutlag DL, Karp PD, Lathrop RH, Searls DB.
-
(1994)
Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology
, pp. 28-36
-
-
Bailey, T.L.1
Elkan, C.2
-
79
-
-
33747823564
-
MEME: discovering and analyzing DNA and protein sequence motifs
-
10.1093/nar/gkl198, 1538909, 16845028
-
Bailey TL, Williams N, Misleh C, Li WW. MEME: discovering and analyzing DNA and protein sequence motifs. Nucleic Acids Res 2006, (Web Server):W369-W373. 10.1093/nar/gkl198, 1538909, 16845028.
-
(2006)
Nucleic Acids Res
-
-
Bailey, T.L.1
Williams, N.2
Misleh, C.3
Li, W.W.4
-
80
-
-
0034565285
-
Combinatorial approaches to finding subtle signals in DNA sequences
-
AAAI Press, Menlo Park, CA, Bourne PE, Gribskov M, Altman RB, Jensen N, Hope D, Lengauer T, Mitchell JC, Scheeff ED, Smith C, Strande S, Weissig H
-
Pevzner PA, Sze SH. Combinatorial approaches to finding subtle signals in DNA sequences. Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology 2000, 269-278. AAAI Press, Menlo Park, CA, Bourne PE, Gribskov M, Altman RB, Jensen N, Hope D, Lengauer T, Mitchell JC, Scheeff ED, Smith C, Strande S, Weissig H.
-
(2000)
Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology
, pp. 269-278
-
-
Pevzner, P.A.1
Sze, S.H.2
-
81
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 1999, 41:95-98.
-
(1999)
Nucl Acids Symp Ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
|