-
1
-
-
0035436324
-
Typing of Clostridium difficile
-
Brazier, J. S. 2001. Typing of Clostridium difficile. Clin. Microbiol. Infect. 7:428-431.
-
(2001)
Clin. Microbiol. Infect.
, vol.7
, pp. 428-431
-
-
Brazier, J.S.1
-
2
-
-
27644572105
-
Comparative phylogenomics of the food-borne pathogen Campylobacter jejuni reveals genetic markers predictive of infection source
-
Champion, O. L., M. W. Gaunt, O. Gundogdu, A. Elmi, A. A. Witney, J. Hinds, N. Dorrell, and B. W. Wren. 2005. Comparative phylogenomics of the food-borne pathogen Campylobacter jejuni reveals genetic markers predictive of infection source. Proc. Natl. Acad. Sci. USA 102:16043-16048.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 16043-16048
-
-
Champion, O.L.1
Gaunt, M.W.2
Gundogdu, O.3
Elmi, A.4
Witney, A.A.5
Hinds, J.6
Dorrell, N.7
Wren, B.W.8
-
3
-
-
0344766074
-
A novel cytotoxin from Clostridium difficile serogroup F is a functional hybrid between two other large clostridial cytotoxins
-
Chaves-Olarte, E., P. Low, E. Freer, T. Norlin, M. Weidmann, C. von Eichel-Streiber, and M. Thelestam. 1999. A novel cytotoxin from Clostridium difficile serogroup F is a functional hybrid between two other large clostridial cytotoxins. J. Biol. Chem. 274:11046-11052.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 11046-11052
-
-
Chaves-Olarte, E.1
Low, P.2
Freer, E.3
Norlin, T.4
Weidmann, M.5
Von Eichel-Streiber, C.6
Thelestam, M.7
-
4
-
-
0027288261
-
Development of a rapid and efficient restriction endonuclease analysis typing system for Clostridium difficile and correlation with other typing systems
-
Clabots, C. R., S. Johnson, K. M. Bettin, P. A. Mathie, M. E. Mulligan, D. R. Schaberg, L. R. Peterson, and D. N. Gerding. 1993. Development of a rapid and efficient restriction endonuclease analysis typing system for Clostridium difficile and correlation with other typing systems. J. Clin. Microbiol. 31:1870-1875.
-
(1993)
J. Clin. Microbiol.
, vol.31
, pp. 1870-1875
-
-
Clabots, C.R.1
Johnson, S.2
Bettin, K.M.3
Mathie, P.A.4
Mulligan, M.E.5
Schaberg, D.R.6
Peterson, L.R.7
Gerding, D.N.8
-
5
-
-
0035189585
-
Pathoadaptive mutations that enhance virulence: Genetic organization of the cadA regions of Shigella spp
-
Day, W. A., Jr., R. E. Fernández, and A. T. Maurelli. 2001. Pathoadaptive mutations that enhance virulence: genetic organization of the cadA regions of Shigella spp. Infect. Immun. 69:7471-7480.
-
(2001)
Infect. Immun.
, vol.69
, pp. 7471-7480
-
-
Day Jr., W.A.1
Fernández, R.E.2
Maurelli, A.T.3
-
6
-
-
25144484500
-
Comparative phylogenomics of pathogenic bacteria by microarray analysis
-
Dorrell, N., S. J. Hinchlifle, and B. W. Wren. 2005. Comparative phylogenomics of pathogenic bacteria by microarray analysis. Curr. Opin. Microbiol. 8:620-626.
-
(2005)
Curr. Opin. Microbiol.
, vol.8
, pp. 620-626
-
-
Dorrell, N.1
Hinchlifle, S.J.2
Wren, B.W.3
-
7
-
-
0034756445
-
Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity
-
Dorrell, N., J. A. Mangan, K. G. Laing, J. Hinds, D. Linton, H. Al-Ghusein, B. G. Barrell, J. Parkhill, N. G. Stoker, A. V. Karlyshev, P. D. Butcher, and B. W. Wren. 2001. Whole genome comparison of Campylobacter jejuni human isolates using a low-cost microarray reveals extensive genetic diversity. Genome Res. 11:1706-1715.
-
(2001)
Genome Res.
, vol.11
, pp. 1706-1715
-
-
Dorrell, N.1
Mangan, J.A.2
Laing, K.G.3
Hinds, J.4
Linton, D.5
Al-Ghusein, H.6
Barrell, B.G.7
Parkhill, J.8
Stoker, N.G.9
Karlyshev, A.V.10
Butcher, P.D.11
Wren, B.W.12
-
8
-
-
0141834721
-
Evidence to support the existence of subgroups within the UK epidemic Clostridium difficile strain (PCR ribotype 1)
-
Fawley, W. N., J. Freeman, and M. H. Wilcox. 2003. Evidence to support the existence of subgroups within the UK epidemic Clostridium difficile strain (PCR ribotype 1). J. Hosp. Infect. 54:74-77.
-
(2003)
J. Hosp. Infect.
, vol.54
, pp. 74-77
-
-
Fawley, W.N.1
Freeman, J.2
Wilcox, M.H.3
-
9
-
-
20344379560
-
A modified pulsed-field gel electrophoresis (PFGE) protocol for subtyping previously non-PFGE type-able isolates of Clostridium difficile polymerase chain reaction ribotype 001
-
Gal, M., G. Northey, and J. S. Brazier. 2005. A modified pulsed-field gel electrophoresis (PFGE) protocol for subtyping previously non-PFGE type-able isolates of Clostridium difficile polymerase chain reaction ribotype 001. J. Hosp. Infect 61:231-236.
-
(2005)
J. Hosp. Infect
, vol.61
, pp. 231-236
-
-
Gal, M.1
Northey, G.2
Brazier, J.S.3
-
10
-
-
33645761368
-
Binary toxin-producing, large clostridial toxin-negative Clostridium difficile strains are enterotoxic but do not cause disease in hamsters
-
Geric, B., R. J. Carman, M. Rupnik, C. W. Genheimer, S. P. Sambol, D. M. Lyerly, D. N. Gerding, and S. Johnson. 2006. Binary toxin-producing, large clostridial toxin-negative Clostridium difficile strains are enterotoxic but do not cause disease in hamsters. J. Infect. Dis. 193:1143-1150.
-
(2006)
J. Infect. Dis.
, vol.193
, pp. 1143-1150
-
-
Geric, B.1
Carman, R.J.2
Rupnik, M.3
Genheimer, C.W.4
Sambol, S.P.5
Lyerly, D.M.6
Gerding, D.N.7
Johnson, S.8
-
11
-
-
0242509106
-
Frequency of binary toxin genes among Clostridium difficile strains that do not produce large clostridial toxins
-
Geric, B., S. Johnson, D. N. Gerding, M. Grabnar, and M. Rupnik. 2003. Frequency of binary toxin genes among Clostridium difficile strains that do not produce large clostridial toxins. J. Clin. Microbiol. 41:5227-5232.
-
(2003)
J. Clin. Microbiol.
, vol.41
, pp. 5227-5232
-
-
Geric, B.1
Johnson, S.2
Gerding, D.N.3
Grabnar, M.4
Rupnik, M.5
-
12
-
-
0346991732
-
+-coupled multidrug efflux pump, PmpM, a member of the MATE family of transporters, from Pseudomonas aeruginosa
-
+-coupled multidrug efflux pump, PmpM, a member of the MATE family of transporters, from Pseudomonas aeruginosa. J. Bacteriol. 186:262-265.
-
(2004)
J. Bacteriol.
, vol.186
, pp. 262-265
-
-
He, G.-X.1
Kuroda, T.2
Mima, T.3
Morita, Y.4
Mizushima, T.5
Tsuchiya, T.6
-
13
-
-
0141742352
-
Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis
-
Hinchliffe, S. J., K. E. Isherwood, R. A. Stabler, M. B. Prentice, A. Rakin, R. A. Nichols, P. C. Oyston, J. Hinds, R. W. Titball, and B. W. Wren. 2003. Application of DNA microarrays to study the evolutionary genomics of Yersinia pestis and Yersinia pseudotuberculosis. Genome Res. 13:2018-2029.
-
(2003)
Genome Res.
, vol.13
, pp. 2018-2029
-
-
Hinchliffe, S.J.1
Isherwood, K.E.2
Stabler, R.A.3
Prentice, M.B.4
Rakin, A.5
Nichols, R.A.6
Oyston, P.C.7
Hinds, J.8
Titball, R.W.9
Wren, B.W.10
-
14
-
-
35448950062
-
Glass slide microarrays for bacterial genomes
-
B. W. Wren and N. Dorrell (ed.), Academic Press, London, United Kingdom
-
Hinds, J., K. G. Laing, J. A. Mangan, and P. D. Butcher. 2002. Glass slide microarrays for bacterial genomes, p. 83-99. In B. W. Wren and N. Dorrell (ed.), Methods in microbiology: functional microbial genomics. Academic Press, London, United Kingdom.
-
(2002)
Methods in Microbiology: Functional Microbial Genomics
, pp. 83-99
-
-
Hinds, J.1
Laing, K.G.2
Mangan, J.A.3
Butcher, P.D.4
-
15
-
-
24944444915
-
Microarray design for bacterial genomes
-
B. W. Wren and N. Dorrell (ed.), Academic Press, London, United Kingdom
-
Hinds, J., A. A. Witney, and J. K. Vass. 2002. Microarray design for bacterial genomes, p. 67-82. In B. W. Wren and N. Dorrell (ed.), Methods in microbiology: functional microbial genomics. Academic Press, London, United Kingdom.
-
(2002)
Methods in Microbiology: Functional Microbial Genomics
, pp. 67-82
-
-
Hinds, J.1
Witney, A.A.2
Vass, J.K.3
-
16
-
-
33646596541
-
Application of comparative phylogenomics to study the evolution of Yersinia enterocolitica and to identify genetic differences relating to pathogenicity
-
Howard, S. L., M. W. Gaunt, J. Hinds, A. A. Witney, R. Stabler, and B. W. Wren. 2006. Application of comparative phylogenomics to study the evolution of Yersinia enterocolitica and to identify genetic differences relating to pathogenicity. J. Bacteriol. 188:3645-3653.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 3645-3653
-
-
Howard, S.L.1
Gaunt, M.W.2
Hinds, J.3
Witney, A.A.4
Stabler, R.5
Wren, B.W.6
-
17
-
-
0031926083
-
Clostridium difficile-associated diarrhea
-
Johnson, S., and D. N. Gerding. 1998. Clostridium difficile-associated diarrhea. Clin. Infect. Dis. 26:1027-1034.
-
(1998)
Clin. Infect. Dis.
, vol.26
, pp. 1027-1034
-
-
Johnson, S.1
Gerding, D.N.2
-
18
-
-
0033604532
-
Epidemics of diarrhea caused by a clindamycin-resistant strain of Clostridium difficile in four hospitals
-
Johnson, S., M. H. Samore, K. A. Farrow, G. E. Killgore, F. C. Tenover, D. Lyras, J. I. Rood, P. DeGirolami, A. L. Baltch, M. E. Rafferty, S. M. Pear, and D. N. Gerding. 1999. Epidemics of diarrhea caused by a clindamycin-resistant strain of Clostridium difficile in four hospitals. N. Engl. J. Med. 341:1645-1651.
-
(1999)
N. Engl. J. Med.
, vol.341
, pp. 1645-1651
-
-
Johnson, S.1
Samore, M.H.2
Farrow, K.A.3
Killgore, G.E.4
Tenover, F.C.5
Lyras, D.6
Rood, J.I.7
DeGirolami, P.8
Baltch, A.L.9
Rafferty, M.E.10
Pear, S.M.11
Gerding, D.N.12
-
19
-
-
0037195198
-
Improved analytical methods for microarray-based genome-composition analysis
-
RESEARCH0065
-
Kim, C. C., E. A. Joyce, K. Chan, and S. Falkow. 2002. Improved analytical methods for microarray-based genome-composition analysis. Genome Biol. 3:RESEARCH0065.
-
(2002)
Genome Biol.
, vol.3
-
-
Kim, C.C.1
Joyce, E.A.2
Chan, K.3
Falkow, S.4
-
20
-
-
25144436950
-
Clostridium difficile ribotype 027, toxinotype III in the Netherlands
-
(In Dutch.)
-
Kuijper, E. J., S. B. Debast, E. Van Kregten, N. Vaessen, D. W. Notermans, and P. J. van den Broek. 2005. [Clostridium difficile ribotype 027, toxinotype III in The Netherlands]. Ned. Tijdschr. Geneeskd. 149:2087-2089. (In Dutch.)
-
(2005)
Ned. Tijdschr. Geneeskd.
, vol.149
, pp. 2087-2089
-
-
Kuijper, E.J.1
Debast, S.B.2
Van Kregten, E.3
Vaessen, N.4
Notermans, D.W.5
Van Den Broek, P.J.6
-
21
-
-
0036467063
-
Health care costs and mortality associated with nosocomial diarrhea due to Clostridium difficile
-
Kyne, L., M. B. Hamel, R. Polavaram, and C. P. Kelly. 2002. Health care costs and mortality associated with nosocomial diarrhea due to Clostridium difficile. Clin. Infect. Dis. 34:346-353.
-
(2002)
Clin. Infect. Dis.
, vol.34
, pp. 346-353
-
-
Kyne, L.1
Hamel, M.B.2
Polavaram, R.3
Kelly, C.P.4
-
22
-
-
2942594170
-
Multilocus sequence typing analysis of human and animal Clostridium difficile isolates of various toxigenic types
-
Lemee, L., A. Dhalluin, M. Pestel-Caron, J. F. Lemeland, and J. L. Pons. 2004. Multilocus sequence typing analysis of human and animal Clostridium difficile isolates of various toxigenic types. J. Clin. Microbiol. 42:2609-2617.
-
(2004)
J. Clin. Microbiol.
, vol.42
, pp. 2609-2617
-
-
Lemee, L.1
Dhalluin, A.2
Pestel-Caron, M.3
Lemeland, J.F.4
Pons, J.L.5
-
23
-
-
28844441314
-
A predominantly clonal multi-institutional outbreak of Clostridium difficile-associated diarrhea with high morbidity and mortality
-
Loo, V. G., L. Poirier, M. A. Miller, M. Oughton, M. D. Libman, S. Michaud, A. M. Bourgault, T. Nguyen, C. Frenette, M. Kelly, A. Vibien, P. Brassard, S. Fenn, K. Dewar, T. J. Hudson, R. Horn, P. Rene, Y. Monczak, and A. Dascal. 2005. A predominantly clonal multi-institutional outbreak of Clostridium difficile-associated diarrhea with high morbidity and mortality. N. Engl. J. Med. 353:2442-2449.
-
(2005)
N. Engl. J. Med.
, vol.353
, pp. 2442-2449
-
-
Loo, V.G.1
Poirier, L.2
Miller, M.A.3
Oughton, M.4
Libman, M.D.5
Michaud, S.6
Bourgault, A.M.7
Nguyen, T.8
Frenette, C.9
Kelly, M.10
Vibien, A.11
Brassard, P.12
Fenn, S.13
Dewar, K.14
Hudson, T.J.15
Horn, R.16
Rene, P.17
Monczak, Y.18
Dascal, A.19
-
24
-
-
28844494086
-
An epidemic, toxin gene-variant strain of Clostridium difficile
-
McDonald, L. C., G. E. Killgore, A. Thompson, R. C. Owens, Jr., S. V. Kazakova, S. P. Sambol, S. Johnson, and D. N. Gerding. 2005. An epidemic, toxin gene-variant strain of Clostridium difficile. N. Engl. J. Med. 353:2433-2441.
-
(2005)
N. Engl. J. Med.
, vol.353
, pp. 2433-2441
-
-
McDonald, L.C.1
Killgore, G.E.2
Thompson, A.3
Owens Jr., R.C.4
Kazakova, S.V.5
Sambol, S.P.6
Johnson, S.7
Gerding, D.N.8
-
25
-
-
27444437759
-
Emergence of fluoroquinolones as the predominant risk factor for Clostridium difficile-associated diarrhea: A cohort study during an epidemic in Quebec
-
Pepin, J., N. Saheb, M. A. Coulombe, M. E. Alary, M. P. Corriveau, S. Authier, M. Leblanc, G. Rivard, M. Bettez, V. Primeau, M. Nguyen, C. E. Jacob, and L. Lanthier. 2005. Emergence of fluoroquinolones as the predominant risk factor for Clostridium difficile-associated diarrhea: a cohort study during an epidemic in Quebec. Clin. Infect. Dis. 41:1254-1260.
-
(2005)
Clin. Infect. Dis.
, vol.41
, pp. 1254-1260
-
-
Pepin, J.1
Saheb, N.2
Coulombe, M.A.3
Alary, M.E.4
Corriveau, M.P.5
Authier, S.6
Leblanc, M.7
Rivard, G.8
Bettez, M.9
Primeau, V.10
Nguyen, M.11
Jacob, C.E.12
Lanthier, L.13
-
26
-
-
16844380988
-
Subtyping of Clostridium difficile polymerase chain reaction (PCR) ribotype 001 by repetitive extragenic palindromic PCR genomic fingerprinting
-
Rahmati, A., M. Gal, G. Northey, and J. S. Brazier. 2005. Subtyping of Clostridium difficile polymerase chain reaction (PCR) ribotype 001 by repetitive extragenic palindromic PCR genomic fingerprinting. J. Hosp. Infect. 60:56-60.
-
(2005)
J. Hosp. Infect.
, vol.60
, pp. 56-60
-
-
Rahmati, A.1
Gal, M.2
Northey, G.3
Brazier, J.S.4
-
27
-
-
0033990048
-
Primer3 on the WWW for general users and for biologist programmers
-
Rozen, S., and H. Skaletsky. 2000. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 132:365-386.
-
(2000)
Methods Mol. Biol.
, vol.132
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.2
-
28
-
-
0031878772
-
A novel toxinotyping scheme and correlation of toxinotypes with serogroups of Clostridium difficile isolates
-
Rupnik, M., V. Avesani, M. Janc, C. von Eichel-Streiber, and M. Delmee. 1998. A novel toxinotyping scheme and correlation of toxinotypes with serogroups of Clostridium difficile isolates. J. Clin. Microbiol. 36:2240-2247.
-
(1998)
J. Clin. Microbiol.
, vol.36
, pp. 2240-2247
-
-
Rupnik, M.1
Avesani, V.2
Janc, M.3
Von Eichel-Streiber, C.4
Delmee, M.5
-
29
-
-
24044474684
-
The emergence of Clostridium difficile as a pathogen of food animals
-
Songer, J. G. 2004. The emergence of Clostridium difficile as a pathogen of food animals. Anim. Health Res. Rev. 5:321-326.
-
(2004)
Anim. Health Res. Rev.
, vol.5
, pp. 321-326
-
-
Songer, J.G.1
-
30
-
-
0036708347
-
Molecular analysis of the pathogenicity locus and polymorphism in the putative negative regulator of toxin production (TcdC) among Clostridium difficile clinical isolates
-
Spigaglia, P., and P. Mastrantonio. 2002. Molecular analysis of the pathogenicity locus and polymorphism in the putative negative regulator of toxin production (TcdC) among Clostridium difficile clinical isolates. J. Clin. Microbiol. 40:3470-3475.
-
(2002)
J. Clin. Microbiol.
, vol.40
, pp. 3470-3475
-
-
Spigaglia, P.1
Mastrantonio, P.2
-
31
-
-
0346732983
-
Pseudomembranous colitis caused by toxin A-negative/toxin B-positive variant strain of Clostridium difficile
-
Toyokawa, M., A. Ueda, H. Tsukamoto, I. Nishi, M. Horikawa, A. Sunada, and S. Asari. 2003. Pseudomembranous colitis caused by toxin A-negative/toxin B-positive variant strain of Clostridium difficile. J. Infect. Chemother. 9:351-354.
-
(2003)
J. Infect. Chemother.
, vol.9
, pp. 351-354
-
-
Toyokawa, M.1
Ueda, A.2
Tsukamoto, H.3
Nishi, I.4
Horikawa, M.5
Sunada, A.6
Asari, S.7
-
32
-
-
25144469664
-
Toxin production by an emerging strain of Clostridium difficile associated with outbreaks of severe disease in North America and Europe
-
Warny, M., J. Pepin, A. Fang, G. Killgore, A. Thompson, J. Brazier, E. Frost, and L. C. McDonald. 2005. Toxin production by an emerging strain of Clostridium difficile associated with outbreaks of severe disease in North America and Europe. Lancet 366:1079-1084.
-
(2005)
Lancet
, vol.366
, pp. 1079-1084
-
-
Warny, M.1
Pepin, J.2
Fang, A.3
Killgore, G.4
Thompson, A.5
Brazier, J.6
Frost, E.7
McDonald, L.C.8
-
33
-
-
0020414760
-
Investigation of an outbreak of antibiotic-associated colitis by various typing methods
-
Wust, J., N. M. Sullivan, U. Hardegger, and T. D. Wilkins. 1982. Investigation of an outbreak of antibiotic-associated colitis by various typing methods. J. Clin. Microbiol. 16:1096-1101.
-
(1982)
J. Clin. Microbiol.
, vol.16
, pp. 1096-1101
-
-
Wust, J.1
Sullivan, N.M.2
Hardegger, U.3
Wilkins, T.D.4
|