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Volumn 101, Issue 20, 2010, Pages 7744-7753

Evaluation of genetic and functional diversity of Stenotrophomonas isolates from diverse effluent treatment plants

Author keywords

Aromatic compound; Genetic diversity; Phylogenetic analysis; RAPD; Stenotrophomonas

Indexed keywords

16S RRNA GENE; 4-METHYLCATECHOL; EFFLUENT TREATMENT PLANTS; FUNCTIONAL DIVERSITY; GENETIC DIVERSITY; IN-SILICO; NUCLEOTIDE SEQUENCES; P-CRESOL; PHYLOGENETIC ANALYSIS; RANDOMLY AMPLIFIED POLYMORPHIC DNA; RAPD; RESTRICTION ENZYMES; STENOTROPHOMONAS;

EID: 77954309106     PISSN: 09608524     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.biortech.2010.05.014     Document Type: Article
Times cited : (26)

References (35)
  • 2
    • 35948969847 scopus 로고    scopus 로고
    • Stenotrophomonas maltophilia SeITE02, a new bacterial strain suitable for bioremediation of selenite-contaminated environmental matrices
    • Antonioli P., Lampis S., Chesini I., Vallini G., Rinalducci S., Zolla L., Righetti P.G. Stenotrophomonas maltophilia SeITE02, a new bacterial strain suitable for bioremediation of selenite-contaminated environmental matrices. Appl. Environ. Microbiol. 2007, 73:6854-6863.
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 6854-6863
    • Antonioli, P.1    Lampis, S.2    Chesini, I.3    Vallini, G.4    Rinalducci, S.5    Zolla, L.6    Righetti, P.G.7
  • 3
    • 0028685490 scopus 로고
    • Fitting a mixture model by expectation maximization to discover motifs in biopolymers
    • AAAI Press, Menlo Park, CA, R.B. Altman, D.L. Brutlag, P.D. Karp, R.H. Lathrop, D.B. Searls (Eds.)
    • Bailey T.L., Elkan C. Fitting a mixture model by expectation maximization to discover motifs in biopolymers. Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology 1994, 28-36. AAAI Press, Menlo Park, CA. R.B. Altman, D.L. Brutlag, P.D. Karp, R.H. Lathrop, D.B. Searls (Eds.).
    • (1994) Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology , pp. 28-36
    • Bailey, T.L.1    Elkan, C.2
  • 4
    • 33747823564 scopus 로고    scopus 로고
    • MEME: discovering and analyzing DNA and protein sequence motifs
    • (Web server issue)
    • Bailey T.L., Williams N., Misleh C., Li W.W. MEME: discovering and analyzing DNA and protein sequence motifs. Nucleic Acids Res. 2006, W369-W373. (Web server issue).
    • (2006) Nucleic Acids Res.
    • Bailey, T.L.1    Williams, N.2    Misleh, C.3    Li, W.W.4
  • 6
    • 0032552094 scopus 로고    scopus 로고
    • Surfactant-enhanced biodegradation of high molecular weight polycyclic aromatic hydrocarbons by Stenotrophomonas maltophilia
    • Boonchan S., Britz M.L., Stanley G.A. Surfactant-enhanced biodegradation of high molecular weight polycyclic aromatic hydrocarbons by Stenotrophomonas maltophilia. Biotechnol. Bioeng. 1998, 59:482-494.
    • (1998) Biotechnol. Bioeng. , vol.59 , pp. 482-494
    • Boonchan, S.1    Britz, M.L.2    Stanley, G.A.3
  • 7
    • 59449105663 scopus 로고    scopus 로고
    • Characterization of a novel Stenotrophomonas isolate with high keratinase activity and purification of the enzyme
    • Cao Z.J., Zhang Q., Wei D.K., Chen L., Wang J., Zhang X.Q., Zhou M.H. Characterization of a novel Stenotrophomonas isolate with high keratinase activity and purification of the enzyme. J. Ind. Microbiol. Biotechnol. 2009, 36:181-188.
    • (2009) J. Ind. Microbiol. Biotechnol. , vol.36 , pp. 181-188
    • Cao, Z.J.1    Zhang, Q.2    Wei, D.K.3    Chen, L.4    Wang, J.5    Zhang, X.Q.6    Zhou, M.H.7
  • 8
    • 0028919534 scopus 로고
    • Epidemiological typing of Stenotrophomonas (Xanthomonas) maltophilia by PCR
    • Chatelut M., Dournes J.L., Chabanon G., Marty N. Epidemiological typing of Stenotrophomonas (Xanthomonas) maltophilia by PCR. J. Clin. Microbiol. 1995, 33:912-914.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 912-914
    • Chatelut, M.1    Dournes, J.L.2    Chabanon, G.3    Marty, N.4
  • 9
    • 34347399808 scopus 로고    scopus 로고
    • Diffusible signal factor-dependent cell-cell signaling and virulence in the nosocomial pathogen Stenotrophomonas maltophilia
    • Fouhy Y., Scanlon K., Schouest K., Spillane C., Crossman L., Avison M.B., Ryan R.P., Dow J.M. Diffusible signal factor-dependent cell-cell signaling and virulence in the nosocomial pathogen Stenotrophomonas maltophilia. J. Bacteriol. 2007, 189:4964-4968.
    • (2007) J. Bacteriol. , vol.189 , pp. 4964-4968
    • Fouhy, Y.1    Scanlon, K.2    Schouest, K.3    Spillane, C.4    Crossman, L.5    Avison, M.B.6    Ryan, R.P.7    Dow, J.M.8
  • 10
    • 70349309958 scopus 로고    scopus 로고
    • A new Stenotrophomonas maltophilia strain producing laccase. Use in decolorization of synthetics dyes
    • Galai S., Limam F., Marzouki M.N. A new Stenotrophomonas maltophilia strain producing laccase. Use in decolorization of synthetics dyes. Appl. Biochem. Biotechnol. 2009, 158:416-431.
    • (2009) Appl. Biochem. Biotechnol. , vol.158 , pp. 416-431
    • Galai, S.1    Limam, F.2    Marzouki, M.N.3
  • 11
    • 77954458084 scopus 로고    scopus 로고
    • Decolorization of an industrial effluent by free and immobilized cells of Stenotrophomonas maltophilia AAP56. Implementation of efficient down flow column reactor
    • Galai S., Limam F., Marzouki M.N. Decolorization of an industrial effluent by free and immobilized cells of Stenotrophomonas maltophilia AAP56. Implementation of efficient down flow column reactor. World J. Microbiol. Biotechnol. 2010, 10.1007/s11274-010-0306-x.
    • (2010) World J. Microbiol. Biotechnol.
    • Galai, S.1    Limam, F.2    Marzouki, M.N.3
  • 12
    • 56449127294 scopus 로고    scopus 로고
    • Diverse and distinct bacterial communities induced biofilm fouling in membrane bioreactors operated under different conditions
    • Huang L., Wever H.D., Diels L. Diverse and distinct bacterial communities induced biofilm fouling in membrane bioreactors operated under different conditions. Environ. Sci. Technol. 2008, 42:8360-8366.
    • (2008) Environ. Sci. Technol. , vol.42 , pp. 8360-8366
    • Huang, L.1    Wever, H.D.2    Diels, L.3
  • 14
    • 34547534713 scopus 로고    scopus 로고
    • Eubacterial diversity of activated biomass from a common effluent treatment plant
    • Kapley A., Baere T.D., Purohit H.J. Eubacterial diversity of activated biomass from a common effluent treatment plant. Res. Microbiol. 2007, 158:494-500.
    • (2007) Res. Microbiol. , vol.158 , pp. 494-500
    • Kapley, A.1    Baere, T.D.2    Purohit, H.J.3
  • 15
    • 0034786607 scopus 로고    scopus 로고
    • Rapid detection of Salmonella in water samples by multiplex PCR
    • Kapley A., Lampel K., Purohit H.J. Rapid detection of Salmonella in water samples by multiplex PCR. Water Environ. Res. 2001, 73:461-465.
    • (2001) Water Environ. Res. , vol.73 , pp. 461-465
    • Kapley, A.1    Lampel, K.2    Purohit, H.J.3
  • 16
    • 33947382223 scopus 로고    scopus 로고
    • Changes in microbial diversity in fed batch reactor operation with waste water containing nitroaromatic residues
    • Kapley A., Prasad S., Purohit H.J. Changes in microbial diversity in fed batch reactor operation with waste water containing nitroaromatic residues. Bioresour. Technol. 2006, 98:2479-2484.
    • (2006) Bioresour. Technol. , vol.98 , pp. 2479-2484
    • Kapley, A.1    Prasad, S.2    Purohit, H.J.3
  • 18
    • 0347989557 scopus 로고    scopus 로고
    • Microbial transformation of pyrethroid insecticides in aqueous and sediment phases
    • Lee S., Gan J., Kim J.S., Kabashima J.N., Crowley D.E. Microbial transformation of pyrethroid insecticides in aqueous and sediment phases. Environ. Toxicol. Chem. 2004, 23:1-6.
    • (2004) Environ. Toxicol. Chem. , vol.23 , pp. 1-6
    • Lee, S.1    Gan, J.2    Kim, J.S.3    Kabashima, J.N.4    Crowley, D.E.5
  • 19
    • 67650905310 scopus 로고    scopus 로고
    • Simultaneous degradation of organophosphates and 4-substituted phenols by Stenotrophomonas species LZ-1 with surface-displayed organophosphorus hydrolase
    • Liu Z., Yang C., Jiang H., Mulchandani A., Chen W., Qiao C. Simultaneous degradation of organophosphates and 4-substituted phenols by Stenotrophomonas species LZ-1 with surface-displayed organophosphorus hydrolase. J. Agri. Food Chem. 2009, 57:6171-6177.
    • (2009) J. Agri. Food Chem. , vol.57 , pp. 6171-6177
    • Liu, Z.1    Yang, C.2    Jiang, H.3    Mulchandani, A.4    Chen, W.5    Qiao, C.6
  • 20
    • 1242333106 scopus 로고    scopus 로고
    • Bench-scale and field-scale evaluation of catechol 2, 3-dioxygenase specific primers for monitoring BTX bioremediation
    • Mesarch B.M., Nakatsu H.C., Nies L. Bench-scale and field-scale evaluation of catechol 2, 3-dioxygenase specific primers for monitoring BTX bioremediation. Water Res. 2004, 38:1281-1288.
    • (2004) Water Res. , vol.38 , pp. 1281-1288
    • Mesarch, B.M.1    Nakatsu, H.C.2    Nies, L.3
  • 21
    • 0035164612 scopus 로고    scopus 로고
    • Comparison of antifungal activities and 16S ribosomal DNA sequences of clinical and environmental isolates of Stenotrophomonas maltophilia
    • Minkwitz A., Berg G. Comparison of antifungal activities and 16S ribosomal DNA sequences of clinical and environmental isolates of Stenotrophomonas maltophilia. J. Clin. Microbiol. 2001, 39:139-145.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 139-145
    • Minkwitz, A.1    Berg, G.2
  • 22
    • 2442687896 scopus 로고    scopus 로고
    • Isolation and characterization of Citrobacter strain HPC255 for broad range substrate specificity for chlorophenol
    • Narde G., Kapley A., Purohit H.J. Isolation and characterization of Citrobacter strain HPC255 for broad range substrate specificity for chlorophenol. Curr. Microbiol. 2004, 48:419-423.
    • (2004) Curr. Microbiol. , vol.48 , pp. 419-423
    • Narde, G.1    Kapley, A.2    Purohit, H.J.3
  • 24
    • 0034565285 scopus 로고    scopus 로고
    • Combinatorial approaches to finding subtle signals in DNA sequences
    • AAAI Press, Menlo Park, CA, P.E. Bourne, M. Gribskov, R.B. Altman, N. Jensen, D. Hope, T. Lengauer, J.C. Mitchell, E.D. Scheeff, C. Smith, S. Strande, H. Weissig (Eds.)
    • Pevzner P.A., Sze S.H. Combinatorial approaches to finding subtle signals in DNA sequences. Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology 2000, 269-278. AAAI Press, Menlo Park, CA. P.E. Bourne, M. Gribskov, R.B. Altman, N. Jensen, D. Hope, T. Lengauer, J.C. Mitchell, E.D. Scheeff, C. Smith, S. Strande, H. Weissig (Eds.).
    • (2000) Proceedings of the Eighth International Conference on Intelligent Systems for Molecular Biology , pp. 269-278
    • Pevzner, P.A.1    Sze, S.H.2
  • 25
    • 84856205140 scopus 로고    scopus 로고
    • Phylogeny in aid of the present and novel microbial lineages: diversity in Bacillus
    • Porwal S., Lal S., Cheema S., Kalia V.C. Phylogeny in aid of the present and novel microbial lineages: diversity in Bacillus. PLoS One 2009, 4:e4438.
    • (2009) PLoS One , vol.4
    • Porwal, S.1    Lal, S.2    Cheema, S.3    Kalia, V.C.4
  • 27
    • 44449135469 scopus 로고    scopus 로고
    • Assessment of microbial diversity in effluent treatment plants by culture dependent and culture independent approaches
    • Rani A., Porwal S., Sharma R., Kapley A., Purohit H.J., Kalia V.C. Assessment of microbial diversity in effluent treatment plants by culture dependent and culture independent approaches. Bioresour. Technol. 2008, 99:7098-7107.
    • (2008) Bioresour. Technol. , vol.99 , pp. 7098-7107
    • Rani, A.1    Porwal, S.2    Sharma, R.3    Kapley, A.4    Purohit, H.J.5    Kalia, V.C.6
  • 28
    • 36148929909 scopus 로고    scopus 로고
    • Wastewater treatment in molasses-based alcohol distilleries for COD and color removal: a review
    • Satyawali Y., Balakrishnan M. Wastewater treatment in molasses-based alcohol distilleries for COD and color removal: a review. J. Environ. Manage. 2008, 86:481-497.
    • (2008) J. Environ. Manage. , vol.86 , pp. 481-497
    • Satyawali, Y.1    Balakrishnan, M.2
  • 29
    • 0141887442 scopus 로고    scopus 로고
    • Characterisation of bacterial cultures enriched on the chlorophenoxyalkanoic acid herbicides 4-(2,4-dichlorophenoxy) butyric acid and 4-(4-chloro-2-methylphenoxy) butyric acid
    • Smejkal C.W., Seymour F.A., Burton S.K., Lappin-Scott H.M. Characterisation of bacterial cultures enriched on the chlorophenoxyalkanoic acid herbicides 4-(2,4-dichlorophenoxy) butyric acid and 4-(4-chloro-2-methylphenoxy) butyric acid. J. Ind. Microbiol. Biotechnol. 2003, 30:561-567.
    • (2003) J. Ind. Microbiol. Biotechnol. , vol.30 , pp. 561-567
    • Smejkal, C.W.1    Seymour, F.A.2    Burton, S.K.3    Lappin-Scott, H.M.4
  • 30
    • 0141427703 scopus 로고    scopus 로고
    • Evidence for dose-dependent effects on plant growth by Stenotrophomonas strains from different origins
    • Suckstorff I., Berg G. Evidence for dose-dependent effects on plant growth by Stenotrophomonas strains from different origins. J. Appl. Microbiol. 2003, 95:656-663.
    • (2003) J. Appl. Microbiol. , vol.95 , pp. 656-663
    • Suckstorff, I.1    Berg, G.2
  • 31
    • 1242336857 scopus 로고    scopus 로고
    • High genetic diversity among Stenotrophomonas maltophilia strains despite their originating at a single hospital
    • Valdezate S., Vindel A., Martin-Dávila P., Del Saz B.S., Baquero F., Cantón R. High genetic diversity among Stenotrophomonas maltophilia strains despite their originating at a single hospital. J. Clin. Microbiol. 2004, 42:693-699.
    • (2004) J. Clin. Microbiol. , vol.42 , pp. 693-699
    • Valdezate, S.1    Vindel, A.2    Martin-Dávila, P.3    Del Saz, B.S.4    Baquero, F.5    Cantón, R.6
  • 32
    • 0029020767 scopus 로고
    • Molecular typing of Stenotrophomonas (Xanthomonas) maltophilia by DNA macrorestriction analysis and random amplified polymorphic DNA analysis
    • Yao J.D., Conly J.M., Krajden M. Molecular typing of Stenotrophomonas (Xanthomonas) maltophilia by DNA macrorestriction analysis and random amplified polymorphic DNA analysis. J. Clin. Microbiol. 1995, 33:2195-2198.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 2195-2198
    • Yao, J.D.1    Conly, J.M.2    Krajden, M.3
  • 33
    • 38349178389 scopus 로고    scopus 로고
    • Substrate specificity of Stenotrophomonas nitritireducens in the hydroxylation of unsaturated fatty acid
    • Yu I., Yeom S., Kim H., Lee J., Kim Y., Oh D. Substrate specificity of Stenotrophomonas nitritireducens in the hydroxylation of unsaturated fatty acid. Appl. Microbiol. Biotechnol. 2008, 78:157-163.
    • (2008) Appl. Microbiol. Biotechnol. , vol.78 , pp. 157-163
    • Yu, I.1    Yeom, S.2    Kim, H.3    Lee, J.4    Kim, Y.5    Oh, D.6
  • 34
    • 0035808165 scopus 로고    scopus 로고
    • Partial degradation of p-aminoazobenzene by a defined mixed culture of Bacillus subtilis and Stenotrophomonas maltophilia
    • Zissi U., Lyberatos G. Partial degradation of p-aminoazobenzene by a defined mixed culture of Bacillus subtilis and Stenotrophomonas maltophilia. Biotechnol. Bioeng. 2001, 72:50-54.
    • (2001) Biotechnol. Bioeng. , vol.72 , pp. 50-54
    • Zissi, U.1    Lyberatos, G.2
  • 35
    • 0033016079 scopus 로고    scopus 로고
    • Kinetics of growth and aniline degradation by Stenotrophomonas maltophilia
    • Zissi U.S., Lyberatos G.C. Kinetics of growth and aniline degradation by Stenotrophomonas maltophilia. Water Environ. Res. 1999, 71:43-49.
    • (1999) Water Environ. Res. , vol.71 , pp. 43-49
    • Zissi, U.S.1    Lyberatos, G.C.2


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