-
1
-
-
67650874081
-
Cancer statistics, 2009
-
A. Jemal, R. Siegel, E. Ward, Y. Hao, J. Xu, and M.J. Thun Cancer statistics, 2009 CA Cancer J. Clin. 59 2009 225 249
-
(2009)
CA Cancer J. Clin.
, vol.59
, pp. 225-249
-
-
Jemal, A.1
Siegel, R.2
Ward, E.3
Hao, Y.4
Xu, J.5
Thun, M.J.6
-
2
-
-
77953744331
-
Cancer mortality in Europe, 2000-2004, and an overview of trends since 1975
-
C. La Vecchia, C. Bosetti, F. Lucchini, P. Bertuccio, E. Negri, P. Boyle, and F. Levi Cancer mortality in Europe, 2000-2004, and an overview of trends since 1975 Ann. Oncol. 21 2010 1323 1360
-
(2010)
Ann. Oncol.
, vol.21
, pp. 1323-1360
-
-
La Vecchia, C.1
Bosetti, C.2
Lucchini, F.3
Bertuccio, P.4
Negri, E.5
Boyle, P.6
Levi, F.7
-
3
-
-
34247563453
-
Genome-wide association study identifies a second prostate cancer susceptibility variant at 8q24
-
J. Gudmundsson, P. Sulem, A. Manolescu, L.T. Amundadottir, D. Gudbjartsson, A. Helgason, T. Rafnar, J.T. Bergthorsson, B.A. Agnarsson, and A. Baker Genome-wide association study identifies a second prostate cancer susceptibility variant at 8q24 Nat. Genet. 39 2007 631 637
-
(2007)
Nat. Genet.
, vol.39
, pp. 631-637
-
-
Gudmundsson, J.1
Sulem, P.2
Manolescu, A.3
Amundadottir, L.T.4
Gudbjartsson, D.5
Helgason, A.6
Rafnar, T.7
Bergthorsson, J.T.8
Agnarsson, B.A.9
Baker, A.10
-
4
-
-
34247548755
-
Genome-wide association study of prostate cancer identifies a second risk locus at 8q24
-
M. Yeager, N. Orr, R.B. Hayes, K.B. Jacobs, P. Kraft, S. Wacholder, M.J. Minichiello, P. Fearnhead, K. Yu, and N. Chatterjee Genome-wide association study of prostate cancer identifies a second risk locus at 8q24 Nat. Genet. 39 2007 645 649
-
(2007)
Nat. Genet.
, vol.39
, pp. 645-649
-
-
Yeager, M.1
Orr, N.2
Hayes, R.B.3
Jacobs, K.B.4
Kraft, P.5
Wacholder, S.6
Minichiello, M.J.7
Fearnhead, P.8
Yu, K.9
Chatterjee, N.10
-
5
-
-
70349547128
-
Genome-wide association and replication studies identify four variants associated with prostate cancer susceptibility
-
J. Gudmundsson, P. Sulem, D.F. Gudbjartsson, T. Blondal, A. Gylfason, B.A. Agnarsson, K.R. Benediktsdottir, D.N. Magnusdottir, G. Orlygsdottir, and M. Jakobsdottir Genome-wide association and replication studies identify four variants associated with prostate cancer susceptibility Nat. Genet. 41 2009 1122 1126
-
(2009)
Nat. Genet.
, vol.41
, pp. 1122-1126
-
-
Gudmundsson, J.1
Sulem, P.2
Gudbjartsson, D.F.3
Blondal, T.4
Gylfason, A.5
Agnarsson, B.A.6
Benediktsdottir, K.R.7
Magnusdottir, D.N.8
Orlygsdottir, G.9
Jakobsdottir, M.10
-
6
-
-
39749129053
-
Multiple newly identified loci associated with prostate cancer susceptibility
-
UK Genetic Prostate Cancer Study Collaborators British Association of Urological Surgeons' Section of Oncology UK ProtecT Study Collaborators J.
-
R.A. Eeles, Z. Kote-Jarai, G.G. Giles, A.A. Olama, M. Guy, S.K. Jugurnauth, S. Mulholland, D.A. Leongamornlert, S.M. Edwards, J. Morrison UK Genetic Prostate Cancer Study Collaborators British Association of Urological Surgeons' Section of Oncology UK ProtecT Study Collaborators Multiple newly identified loci associated with prostate cancer susceptibility Nat. Genet. 40 2008 316 321
-
(2008)
Nat. Genet.
, vol.40
, pp. 316-321
-
-
Eeles, R.A.1
Kote-Jarai, Z.2
Giles, G.G.3
Olama, A.A.4
Guy, M.5
Jugurnauth, S.K.6
Mulholland, S.7
Leongamornlert, D.A.8
Edwards, S.M.9
Morrison10
-
7
-
-
39749118602
-
Multiple loci identified in a genome-wide association study of prostate cancer
-
G. Thomas, K.B. Jacobs, M. Yeager, P. Kraft, S. Wacholder, N. Orr, K. Yu, N. Chatterjee, R. Welch, and A. Hutchinson Multiple loci identified in a genome-wide association study of prostate cancer Nat. Genet. 40 2008 310 315
-
(2008)
Nat. Genet.
, vol.40
, pp. 310-315
-
-
Thomas, G.1
Jacobs, K.B.2
Yeager, M.3
Kraft, P.4
Wacholder, S.5
Orr, N.6
Yu, K.7
Chatterjee, N.8
Welch, R.9
Hutchinson, A.10
-
8
-
-
77953529585
-
A compendium of human mitochondrial gene expression machinery with links to disease
-
T.E. Shutt, and G.S. Shadel A compendium of human mitochondrial gene expression machinery with links to disease Environ. Mol. Mutagen. 51 2010 360 379
-
(2010)
Environ. Mol. Mutagen.
, vol.51
, pp. 360-379
-
-
Shutt, T.E.1
Shadel, G.S.2
-
9
-
-
66749163678
-
Disulfide formation in the ER and mitochondria: Two solutions to a common process
-
J. Riemer, N. Bulleid, and J.M. Herrmann Disulfide formation in the ER and mitochondria: two solutions to a common process Science 324 2009 1284 1287
-
(2009)
Science
, vol.324
, pp. 1284-1287
-
-
Riemer, J.1
Bulleid, N.2
Herrmann, J.M.3
-
10
-
-
66749153836
-
Correcting for purifying selection: An improved human mitochondrial molecular clock
-
P. Soares, L. Ermini, N. Thomson, M. Mormina, T. Rito, A. Röhl, A. Salas, S. Oppenheimer, V. Macaulay, and M.B. Richards Correcting for purifying selection: an improved human mitochondrial molecular clock Am. J. Hum. Genet. 84 2009 740 759
-
(2009)
Am. J. Hum. Genet.
, vol.84
, pp. 740-759
-
-
Soares, P.1
Ermini, L.2
Thomson, N.3
Mormina, M.4
Rito, T.5
Röhl, A.6
Salas, A.7
Oppenheimer, S.8
MacAulay, V.9
Richards, M.B.10
-
11
-
-
32044439852
-
Mitochondrial DNA as a potential tool for early cancer detection
-
R.L. Parr, G.D. Dakubo, R.E. Thayer, K. McKenney, and M.A. Birch-Machin Mitochondrial DNA as a potential tool for early cancer detection Hum. Genomics 2 2006 252 257
-
(2006)
Hum. Genomics
, vol.2
, pp. 252-257
-
-
Parr, R.L.1
Dakubo, G.D.2
Thayer, R.E.3
McKenney, K.4
Birch-Machin, M.A.5
-
12
-
-
38449094309
-
Mitochondrial genome deletion aids in the identification of false- and true-negative prostate needle core biopsy specimens
-
J. Maki, K. Robinson, B. Reguly, J. Alexander, R. Wittock, A. Aguirre, E.P. Diamandis, N. Escott, A. Skehan, and O. Prowse Mitochondrial genome deletion aids in the identification of false- and true-negative prostate needle core biopsy specimens Am. J. Clin. Pathol. 129 2008 57 66
-
(2008)
Am. J. Clin. Pathol.
, vol.129
, pp. 57-66
-
-
Maki, J.1
Robinson, K.2
Reguly, B.3
Alexander, J.4
Wittock, R.5
Aguirre, A.6
Diamandis, E.P.7
Escott, N.8
Skehan, A.9
Prowse, O.10
-
13
-
-
33244496170
-
Identification of somatic and germline mitochondrial DNA sequence variants in prostate cancer patients
-
M. Gómez-Zaera, J. Abril, L. González, F. Aguiló, E. Condom, M. Nadal, and V. Nunes Identification of somatic and germline mitochondrial DNA sequence variants in prostate cancer patients Mutat. Res. 595 2006 42 51
-
(2006)
Mutat. Res.
, vol.595
, pp. 42-51
-
-
Gómez-Zaera, M.1
Abril, J.2
González, L.3
Aguiló, F.4
Condom, E.5
Nadal, M.6
Nunes, V.7
-
14
-
-
0037112431
-
Extensive somatic mitochondrial mutations in primary prostate cancer using laser capture microdissection
-
J.Z. Chen, N. Gokden, G.F. Greene, P. Mukunyadzi, and F.F. Kadlubar Extensive somatic mitochondrial mutations in primary prostate cancer using laser capture microdissection Cancer Res. 62 2002 6470 6474
-
(2002)
Cancer Res.
, vol.62
, pp. 6470-6474
-
-
Chen, J.Z.1
Gokden, N.2
Greene, G.F.3
Mukunyadzi, P.4
Kadlubar, F.F.5
-
15
-
-
64049089255
-
Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation
-
M. van Oven, and M. Kayser Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation Hum. Mutat. 30 2009 E386 E394
-
(2009)
Hum. Mutat.
, vol.30
-
-
Van Oven, M.1
Kayser, M.2
-
16
-
-
39049136097
-
Is mitochondrial DNA variation associated with sporadic breast cancer risk?
-
A. Mosquera-Miguel, V. Alvarez-Iglesias, A. Carracedo, A. Salas, A. Vega, A. Carracedo, R. Milne, A.C. de León, J. Benitez, A. Carracedo, and A. Salas Is mitochondrial DNA variation associated with sporadic breast cancer risk? Cancer Res. 68 2008 623 625 author reply 624
-
(2008)
Cancer Res.
, vol.68
, pp. 623-625
-
-
Mosquera-Miguel, A.1
Alvarez-Iglesias, V.2
Carracedo, A.3
Salas, A.4
Vega, A.5
Carracedo, A.6
Milne, R.7
De León, A.C.8
Benitez, J.9
Carracedo, A.10
Salas, A.11
-
17
-
-
68149163248
-
Mitochondrial haplogroups and control region polymorphisms are not associated with prostate cancer in Middle European Caucasians
-
E.E. Mueller, W. Eder, J.A. Mayr, B. Paulweber, W. Sperl, W. Horninger, H. Klocker, and B. Kofler Mitochondrial haplogroups and control region polymorphisms are not associated with prostate cancer in Middle European Caucasians PLoS ONE 4 2009 e6370
-
(2009)
PLoS ONE
, vol.4
, pp. 6370
-
-
Mueller, E.E.1
Eder, W.2
Mayr, J.A.3
Paulweber, B.4
Sperl, W.5
Horninger, W.6
Klocker, H.7
Kofler, B.8
-
18
-
-
48249114016
-
Mitochondrial DNA haplogroup analysis reveals no association between the common genetic lineages and prostate cancer in the Korean population
-
W. Kim, T.K. Yoo, D.J. Shin, H.W. Rho, H.J. Jin, E.T. Kim, and Y.S. Bae Mitochondrial DNA haplogroup analysis reveals no association between the common genetic lineages and prostate cancer in the Korean population PLoS ONE 3 2008 e2211
-
(2008)
PLoS ONE
, vol.3
, pp. 2211
-
-
Kim, W.1
Yoo, T.K.2
Shin, D.J.3
Rho, H.W.4
Jin, H.J.5
Kim, E.T.6
Bae, Y.S.7
-
19
-
-
30344471873
-
North American white mitochondrial haplogroups in prostate and renal cancer
-
L.M. Booker, G.M. Habermacher, B.C. Jessie, Q.C. Sun, A.K. Baumann, M. Amin, S.D. Lim, C. Fernandez-Golarz, R.H. Lyles, and M.D. Brown North American white mitochondrial haplogroups in prostate and renal cancer J. Urol. 175 2006 468 472 discussion 472-473
-
(2006)
J. Urol.
, vol.175
, pp. 468-472
-
-
Booker, L.M.1
Habermacher, G.M.2
Jessie, B.C.3
Sun, Q.C.4
Baumann, A.K.5
Amin, M.6
Lim, S.D.7
Fernandez-Golarz, C.8
Lyles, R.H.9
Brown, M.D.10
-
20
-
-
20044364344
-
MtDNA mutations increase tumorigenicity in prostate cancer
-
J.A. Petros, A.K. Baumann, E. Ruiz-Pesini, M.B. Amin, C.Q. Sun, J. Hall, S. Lim, M.M. Issa, W.D. Flanders, and S.H. Hosseini mtDNA mutations increase tumorigenicity in prostate cancer Proc. Natl. Acad. Sci. USA 102 2005 719 724
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 719-724
-
-
Petros, J.A.1
Baumann, A.K.2
Ruiz-Pesini, E.3
Amin, M.B.4
Sun, C.Q.5
Hall, J.6
Lim, S.7
Issa, M.M.8
Flanders, W.D.9
Hosseini, S.H.10
-
21
-
-
17944367327
-
Mitochondrial mutations in early stage prostate cancer and bodily fluids
-
C. Jerónimo, S. Nomoto, O.L. Caballero, H. Usadel, R. Henrique, G. Varzim, J. Oliveira, C. Lopes, M.S. Fliss, and D. Sidransky Mitochondrial mutations in early stage prostate cancer and bodily fluids Oncogene 20 2001 5195 5198
-
(2001)
Oncogene
, vol.20
, pp. 5195-5198
-
-
Jerónimo, C.1
Nomoto, S.2
Caballero, O.L.3
Usadel, H.4
Henrique, R.5
Varzim, G.6
Oliveira, J.7
Lopes, C.8
Fliss, M.S.9
Sidransky, D.10
-
22
-
-
33745984239
-
Somatic mitochondrial DNA mutations in prostate cancer and normal appearing adjacent glands in comparison to age-matched prostate samples without malignant histology
-
R.L. Parr, G.D. Dakubo, K.A. Crandall, J. Maki, B. Reguly, A. Aguirre, R. Wittock, K. Robinson, J.S. Alexander, and M.A. Birch-Machin Somatic mitochondrial DNA mutations in prostate cancer and normal appearing adjacent glands in comparison to age-matched prostate samples without malignant histology J. Mol. Diagn. 8 2006 312 319
-
(2006)
J. Mol. Diagn.
, vol.8
, pp. 312-319
-
-
Parr, R.L.1
Dakubo, G.D.2
Crandall, K.A.3
Maki, J.4
Reguly, B.5
Aguirre, A.6
Wittock, R.7
Robinson, K.8
Alexander, J.S.9
Birch-Machin, M.A.10
-
23
-
-
28444447123
-
A critical reassessment of the role of mitochondria in tumorigenesis
-
A. Salas, Y.G. Yao, V. Macaulay, A. Vega, A. Carracedo, and H.-J. Bandelt A critical reassessment of the role of mitochondria in tumorigenesis PLoS Med. 2 2005 e296
-
(2005)
PLoS Med.
, vol.2
, pp. 296
-
-
Salas, A.1
Yao, Y.G.2
MacAulay, V.3
Vega, A.4
Carracedo, A.5
Bandelt, H.-J.6
-
24
-
-
33744726186
-
-
L.H. Sobin, M.K. Gospodarowicz, C.H. Wittekind, Seventh Edition John Wiley & Sons Hoboken, NJ
-
L.H. Sobin, M.K. Gospodarowicz, C.H. Wittekind, TNM Classification of Malignant Tumours Seventh Edition 2002 John Wiley & Sons Hoboken, NJ
-
(2002)
TNM Classification of Malignant Tumours
-
-
-
25
-
-
84942475860
-
Pathologic and clinical findings to predict tumor extent of nonpalpable (stage T1c) prostate cancer
-
J.I. Epstein, P.C. Walsh, M. Carmichael, and C.B. Brendler Pathologic and clinical findings to predict tumor extent of nonpalpable (stage T1c) prostate cancer JAMA 271 1994 368 374
-
(1994)
JAMA
, vol.271
, pp. 368-374
-
-
Epstein, J.I.1
Walsh, P.C.2
Carmichael, M.3
Brendler, C.B.4
-
26
-
-
0036903550
-
Diagnostic utility of immunohistochemical staining for p63, a sensitive marker of prostatic basal cells
-
M.H. Weinstein, S. Signoretti, and M. Loda Diagnostic utility of immunohistochemical staining for p63, a sensitive marker of prostatic basal cells Mod. Pathol. 15 2002 1302 1308
-
(2002)
Mod. Pathol.
, vol.15
, pp. 1302-1308
-
-
Weinstein, M.H.1
Signoretti, S.2
Loda, M.3
-
27
-
-
33847684220
-
Whole-mtDNA genome sequence analysis of ancient African lineages
-
M.K. Gonder, H.M. Mortensen, F.A. Reed, A. de Sousa, and S.A. Tishkoff Whole-mtDNA genome sequence analysis of ancient African lineages Mol. Biol. Evol. 24 2007 757 768
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 757-768
-
-
Gonder, M.K.1
Mortensen, H.M.2
Reed, F.A.3
De Sousa, A.4
Tishkoff, S.A.5
-
28
-
-
64849084181
-
Sequencing strategy for the whole mitochondrial genome resulting in high quality sequences
-
L. Fendt, B. Zimmermann, M. Daniaux, and W. Parson Sequencing strategy for the whole mitochondrial genome resulting in high quality sequences BMC Genomics 10 2009 139
-
(2009)
BMC Genomics
, vol.10
, pp. 139
-
-
Fendt, L.1
Zimmermann, B.2
Daniaux, M.3
Parson, W.4
-
29
-
-
5044219883
-
Single nucleotide polymorphisms over the entire mtDNA genome that increase the power of forensic testing in Caucasians
-
M.D. Coble, R.S. Just, J.E. O'Callaghan, I.H. Letmanyi, C.T. Peterson, J.A. Irwin, and T.J. Parsons Single nucleotide polymorphisms over the entire mtDNA genome that increase the power of forensic testing in Caucasians Int. J. Legal Med. 118 2004 137 146
-
(2004)
Int. J. Legal Med.
, vol.118
, pp. 137-146
-
-
Coble, M.D.1
Just, R.S.2
O'Callaghan, J.E.3
Letmanyi, I.H.4
Peterson, C.T.5
Irwin, J.A.6
Parsons, T.J.7
-
30
-
-
33847069521
-
Generating population data for the EMPOP database - An overview of the mtDNA sequencing and data evaluation processes considering 273 Austrian control region sequences as example
-
A. Brandstätter, H. Niederstätter, M. Pavlic, P. Grubwieser, and W. Parson Generating population data for the EMPOP database - an overview of the mtDNA sequencing and data evaluation processes considering 273 Austrian control region sequences as example Forensic Sci. Int. 166 2007 164 175
-
(2007)
Forensic Sci. Int.
, vol.166
, pp. 164-175
-
-
Brandstätter, A.1
Niederstätter, H.2
Pavlic, M.3
Grubwieser, P.4
Parson, W.5
-
31
-
-
34248647282
-
Rapid identification of unknown heteroplasmic mutations across the entire human mitochondrial genome with mismatch-specific Surveyor Nuclease
-
S. Bannwarth, V. Procaccio, and V. Paquis-Flucklinger Rapid identification of unknown heteroplasmic mutations across the entire human mitochondrial genome with mismatch-specific Surveyor Nuclease Nat. Protoc. 1 2006 2037 2047
-
(2006)
Nat. Protoc.
, vol.1
, pp. 2037-2047
-
-
Bannwarth, S.1
Procaccio, V.2
Paquis-Flucklinger, V.3
-
32
-
-
33745965440
-
Dissection of mitochondrial superhaplogroup H using coding region SNPs
-
DOI 10.1002/elps.200500772
-
A. Brandstätter, A. Salas, H. Niederstätter, C. Gassner, A. Carracedo, and W. Parson Dissection of mitochondrial superhaplogroup H using coding region SNPs Electrophoresis 27 2006 2541 2550 (Pubitemid 44057508)
-
(2006)
Electrophoresis
, vol.27
, Issue.13
, pp. 2541-2550
-
-
Brandstatter, A.1
Salas, A.2
Niederstatter, H.3
Gassner, C.4
Carracedo, A.5
Parson, W.6
-
33
-
-
8844274059
-
Phylogeny of mitochondrial DNA macrohaplogroup N in India, based on complete sequencing: Implications for the peopling of South Asia
-
M.G. Palanichamy, C. Sun, S. Agrawal, H.-J. Bandelt, Q.-P. Kong, F. Khan, C.-Y. Wang, T.K. Chaudhuri, V. Palla, and Y.-P. Zhang Phylogeny of mitochondrial DNA macrohaplogroup N in India, based on complete sequencing: implications for the peopling of South Asia Am. J. Hum. Genet. 75 2004 966 978
-
(2004)
Am. J. Hum. Genet.
, vol.75
, pp. 966-978
-
-
Palanichamy, M.G.1
Sun, C.2
Agrawal, S.3
Bandelt, H.-J.4
Kong, Q.-P.5
Khan, F.6
Wang, C.-Y.7
Chaudhuri, T.K.8
Palla, V.9
Zhang, Y.-P.10
-
34
-
-
0042934312
-
Rapid screening of mtDNA coding region SNPs for the identification of west European Caucasian haplogroups
-
A. Brandstätter, T.J. Parsons, and W. Parson Rapid screening of mtDNA coding region SNPs for the identification of west European Caucasian haplogroups Int. J. Legal Med. 117 2003 291 298
-
(2003)
Int. J. Legal Med.
, vol.117
, pp. 291-298
-
-
Brandstätter, A.1
Parsons, T.J.2
Parson, W.3
-
35
-
-
0032868141
-
Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA
-
R.M. Andrews, I. Kubacka, P.F. Chinnery, R.N. Lightowlers, D.M. Turnbull, and N. Howell Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA Nat. Genet. 23 1999 147
-
(1999)
Nat. Genet.
, vol.23
, pp. 147
-
-
Andrews, R.M.1
Kubacka, I.2
Chinnery, P.F.3
Lightowlers, R.N.4
Turnbull, D.M.5
Howell, N.6
-
36
-
-
12144290521
-
Monitoring the inheritance of heteroplasmy by computer-assisted detection of mixed basecalls in the entire human mitochondrial DNA control region
-
A. Brandstätter, H. Niederstätter, and W. Parson Monitoring the inheritance of heteroplasmy by computer-assisted detection of mixed basecalls in the entire human mitochondrial DNA control region Int. J. Legal Med. 118 2004 47 54
-
(2004)
Int. J. Legal Med.
, vol.118
, pp. 47-54
-
-
Brandstätter, A.1
Niederstätter, H.2
Parson, W.3
-
37
-
-
66149168699
-
ECOMPAGT - Efficient combination and management of phenotypes and genotypes for genetic epidemiology
-
S. Schönherr, H. Weissensteiner, S. Coassin, G. Specht, F. Kronenberg, and A. Brandstätter eCOMPAGT - efficient combination and management of phenotypes and genotypes for genetic epidemiology BMC Bioinformatics 10 2009 139
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 139
-
-
Schönherr, S.1
Weissensteiner, H.2
Coassin, S.3
Specht, G.4
Kronenberg, F.5
Brandstätter, A.6
-
38
-
-
77950449916
-
ECOMPAGT integrates mtDNA: Import, validation and export of mitochondrial DNA profiles for population genetics, tumour dynamics and genotype-phenotype association studies
-
H. Weissensteiner, S. Schönherr, G. Specht, F. Kronenberg, and A. Brandstätter eCOMPAGT integrates mtDNA: import, validation and export of mitochondrial DNA profiles for population genetics, tumour dynamics and genotype-phenotype association studies BMC Bioinformatics 11 2010 122
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 122
-
-
Weissensteiner, H.1
Schönherr, S.2
Specht, G.3
Kronenberg, F.4
Brandstätter, A.5
-
39
-
-
78649799875
-
HaploGrep: A fast and reliable algorithm for automatic classification of mitochondrial DNA haplogroups
-
A. Kloss-Brandstätter, D. Pacher, S. Schönherr, H. Weissensteiner, R. Binna, G. Specht, and F. Kronenberg HaploGrep: a fast and reliable algorithm for automatic classification of mitochondrial DNA haplogroups Hum. Mutat. 2010 in press. Published online October 19, 2010
-
(2010)
Hum. Mutat.
-
-
Kloss-Brandstätter, A.1
Pacher, D.2
Schönherr, S.3
Weissensteiner, H.4
Binna, R.5
Specht, G.6
Kronenberg, F.7
-
40
-
-
77950044558
-
Lost in the space of bioinformatic tools: A constantly updated survival guide for genetic epidemiology. The GenEpi Toolbox
-
S. Coassin, A. Brandstätter, and F. Kronenberg Lost in the space of bioinformatic tools: a constantly updated survival guide for genetic epidemiology. The GenEpi Toolbox Atherosclerosis 209 2010 321 335
-
(2010)
Atherosclerosis
, vol.209
, pp. 321-335
-
-
Coassin, S.1
Brandstätter, A.2
Kronenberg, F.3
-
41
-
-
0035869223
-
Prediction of deleterious human alleles
-
S. Sunyaev, V. Ramensky, I. Koch, W. Lathe 3rd, A.S. Kondrashov, and P. Bork Prediction of deleterious human alleles Hum. Mol. Genet. 10 2001 591 597
-
(2001)
Hum. Mol. Genet.
, vol.10
, pp. 591-597
-
-
Sunyaev, S.1
Ramensky, V.2
Koch, I.3
Lathe III, W.4
Kondrashov, A.S.5
Bork, P.6
-
42
-
-
0043122919
-
SIFT: Predicting amino acid changes that affect protein function
-
P.C. Ng, and S. Henikoff SIFT: Predicting amino acid changes that affect protein function Nucleic Acids Res. 31 2003 3812 3814
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3812-3814
-
-
Ng, P.C.1
Henikoff, S.2
-
43
-
-
25144496606
-
PMUT: A web-based tool for the annotation of pathological mutations on proteins
-
C. Ferrer-Costa, J.L. Gelpí, L. Zamakola, I. Parraga, X. de la Cruz, and M. Orozco PMUT: a web-based tool for the annotation of pathological mutations on proteins Bioinformatics 21 2005 3176 3178
-
(2005)
Bioinformatics
, vol.21
, pp. 3176-3178
-
-
Ferrer-Costa, C.1
Gelpí, J.L.2
Zamakola, L.3
Parraga, I.4
De La Cruz, X.5
Orozco, M.6
-
44
-
-
34447525139
-
Mamit-tRNA, a database of mammalian mitochondrial tRNA primary and secondary structures
-
J. Pütz, B. Dupuis, M. Sissler, and C. Florentz Mamit-tRNA, a database of mammalian mitochondrial tRNA primary and secondary structures RNA 13 2007 1184 1190
-
(2007)
RNA
, vol.13
, pp. 1184-1190
-
-
Pütz, J.1
Dupuis, B.2
Sissler, M.3
Florentz, C.4
-
45
-
-
0029402212
-
Structure and function of ribosomal RNA
-
H.F. Noller, R. Green, G. Heilek, V. Hoffarth, A. Hüttenhofer, S. Joseph, I. Lee, K. Lieberman, A. Mankin, and C. Merryman Structure and function of ribosomal RNA Biochem. Cell Biol. 73 1995 997 1009
-
(1995)
Biochem. Cell Biol.
, vol.73
, pp. 997-1009
-
-
Noller, H.F.1
Green, R.2
Heilek, G.3
Hoffarth, V.4
Hüttenhofer, A.5
Joseph, S.6
Lee, I.7
Lieberman, K.8
Mankin, A.9
Merryman, C.10
-
46
-
-
65149104318
-
The diversity present in 5140 human mitochondrial genomes
-
L. Pereira, F. Freitas, V. Fernandes, J.B. Pereira, M.D. Costa, S. Costa, V. Máximo, V. Macaulay, R. Rocha, and D.C. Samuels The diversity present in 5140 human mitochondrial genomes Am. J. Hum. Genet. 84 2009 628 640
-
(2009)
Am. J. Hum. Genet.
, vol.84
, pp. 628-640
-
-
Pereira, L.1
Freitas, F.2
Fernandes, V.3
Pereira, J.B.4
Costa, M.D.5
Costa, S.6
Máximo, V.7
MacAulay, V.8
Rocha, R.9
Samuels, D.C.10
-
47
-
-
78649343406
-
Ribosome-associated GTPases: The role of RNA for GTPase activation
-
N. Clementi, and N. Polacek Ribosome-associated GTPases: The role of RNA for GTPase activation RNA Biol. 7 2010 1 7
-
(2010)
RNA Biol.
, vol.7
, pp. 1-7
-
-
Clementi, N.1
Polacek, N.2
-
48
-
-
57849143324
-
Mitochondrial DNA mutations in cancer: A review
-
C. Santos, M. Martínez, M. Lima, Y.J. Hao, N. Simões, and R. Montiel Mitochondrial DNA mutations in cancer: a review Curr. Top. Med. Chem. 8 2008 1351 1366
-
(2008)
Curr. Top. Med. Chem.
, vol.8
, pp. 1351-1366
-
-
Santos, C.1
Martínez, M.2
Lima, M.3
Hao, Y.J.4
Simões, N.5
Montiel, R.6
-
49
-
-
76749101102
-
Somatic mutations in mitochondrial genome and their potential roles in the progression of human gastric cancer
-
W.Y. Hung, C.W. Wu, P.H. Yin, C.J. Chang, A.F. Li, C.W. Chi, Y.H. Wei, and H.C. Lee Somatic mutations in mitochondrial genome and their potential roles in the progression of human gastric cancer Biochim. Biophys. Acta 1800 2010 264 270
-
(2010)
Biochim. Biophys. Acta
, vol.1800
, pp. 264-270
-
-
Hung, W.Y.1
Wu, C.W.2
Yin, P.H.3
Chang, C.J.4
Li, A.F.5
Chi, C.W.6
Wei, Y.H.7
Lee, H.C.8
-
50
-
-
45749154203
-
Altered expression of 12S/MT-RNR1, MT-CO2/COX2, and MT-ATP6 mitochondrial genes in prostate cancer
-
J. Abril, M.L. de Heredia, L. González, R. Clries, M. Nadal, E. Condom, F. Aguiló, M. Gómez-Zaera, and V. Nunes Altered expression of 12S/MT-RNR1, MT-CO2/COX2, and MT-ATP6 mitochondrial genes in prostate cancer Prostate 68 2008 1086 1096
-
(2008)
Prostate
, vol.68
, pp. 1086-1096
-
-
Abril, J.1
De Heredia, M.L.2
González, L.3
Clries, R.4
Nadal, M.5
Condom, E.6
Aguiló, F.7
Gómez-Zaera, M.8
Nunes, V.9
-
51
-
-
43249112094
-
ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis
-
K. Ishikawa, K. Takenaga, M. Akimoto, N. Koshikawa, A. Yamaguchi, H. Imanishi, K. Nakada, Y. Honma, and J.-I. Hayashi ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis Science 320 2008 661 664
-
(2008)
Science
, vol.320
, pp. 661-664
-
-
Ishikawa, K.1
Takenaga, K.2
Akimoto, M.3
Koshikawa, N.4
Yamaguchi, A.5
Imanishi, H.6
Nakada, K.7
Honma, Y.8
Hayashi, J.-I.9
-
52
-
-
58149345071
-
Mitochondrial DNA mutation stimulates prostate cancer growth in bone stromal environment
-
R.S. Arnold, C.Q. Sun, J.C. Richards, G. Grigoriev, I.M. Coleman, P.S. Nelson, C.L. Hsieh, J.K. Lee, Z. Xu, and A. Rogatko Mitochondrial DNA mutation stimulates prostate cancer growth in bone stromal environment Prostate 69 2009 1 11
-
(2009)
Prostate
, vol.69
, pp. 1-11
-
-
Arnold, R.S.1
Sun, C.Q.2
Richards, J.C.3
Grigoriev, G.4
Coleman, I.M.5
Nelson, P.S.6
Hsieh, C.L.7
Lee, J.K.8
Xu, Z.9
Rogatko, A.10
-
53
-
-
40349101958
-
Increased distributional variance of mitochondrial DNA content associated with prostate cancer cells as compared with normal prostate cells
-
T. Mizumachi, L. Muskhelishvili, A. Naito, J. Furusawa, C.Y. Fan, E.R. Siegel, F.F. Kadlubar, U. Kumar, and M. Higuchi Increased distributional variance of mitochondrial DNA content associated with prostate cancer cells as compared with normal prostate cells Prostate 68 2008 408 417
-
(2008)
Prostate
, vol.68
, pp. 408-417
-
-
Mizumachi, T.1
Muskhelishvili, L.2
Naito, A.3
Furusawa, J.4
Fan, C.Y.5
Siegel, E.R.6
Kadlubar, F.F.7
Kumar, U.8
Higuchi, M.9
-
54
-
-
77957314697
-
The pattern of natural selection in somatic cancer mutations of human mtDNA
-
P. Stafford, and E.B. Chen-Quin The pattern of natural selection in somatic cancer mutations of human mtDNA J. Hum. Genet. 55 2010 605 612
-
(2010)
J. Hum. Genet.
, vol.55
, pp. 605-612
-
-
Stafford, P.1
Chen-Quin, E.B.2
-
55
-
-
0033735040
-
Search for characteristic structural features of mammalian mitochondrial tRNAs
-
M. Helm, H. Brulé, D. Friede, R. Giegé, D. Pütz, and C. Florentz Search for characteristic structural features of mammalian mitochondrial tRNAs RNA 6 2000 1356 1379
-
(2000)
RNA
, vol.6
, pp. 1356-1379
-
-
Helm, M.1
Brulé, H.2
Friede, D.3
Giegé, R.4
Pütz, D.5
Florentz, C.6
-
56
-
-
73649098461
-
Mitochondrial tRNAs as light strand replication origins: Similarity between anticodon loops and the loop of the light strand replication origin predicts initiation of DNA replication
-
H. Seligmann Mitochondrial tRNAs as light strand replication origins: similarity between anticodon loops and the loop of the light strand replication origin predicts initiation of DNA replication Biosystems 99 2010 85 93
-
(2010)
Biosystems
, vol.99
, pp. 85-93
-
-
Seligmann, H.1
-
57
-
-
0038124449
-
Mitochondrial DNA heteroplasmy or artefacts - A matter of the amplification strategy?
-
A. Brandstätter, and W. Parson Mitochondrial DNA heteroplasmy or artefacts - a matter of the amplification strategy? Int. J. Legal Med. 117 2003 180 184
-
(2003)
Int. J. Legal Med.
, vol.117
, pp. 180-184
-
-
Brandstätter, A.1
Parson, W.2
-
58
-
-
77955562856
-
Detecting heteroplasmy from high-throughput sequencing of complete human mitochondrial DNA genomes
-
M. Li, A. Schönberg, M. Schaefer, R. Schroeder, I. Nasidze, and M. Stoneking Detecting heteroplasmy from high-throughput sequencing of complete human mitochondrial DNA genomes Am. J. Hum. Genet. 87 2010 237 249
-
(2010)
Am. J. Hum. Genet.
, vol.87
, pp. 237-249
-
-
Li, M.1
Schönberg, A.2
Schaefer, M.3
Schroeder, R.4
Nasidze, I.5
Stoneking, M.6
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