-
1
-
-
33750541829
-
Gene expression profile classification: A review
-
Asyali, M.H., Colak, D., Demirkaya, O. and Inan, M.S. (2006), Gene expression profile classification: a review, Current Bioinformatics, Vol. 1, No.1, pp. 55-73.
-
(2006)
Current Bioinformatics
, vol.1
, Issue.1
, pp. 55-73
-
-
Asyali, M.H.1
Colak, D.2
Demirkaya, O.3
Inan, M.S.4
-
3
-
-
33846515112
-
Partial least squares: A versatile tool for the analysis of high-dimensional genomic data
-
Boulesteix, A.-L. and Strimmer, K. (2007), Partial least squares: a versatile tool for the analysis of high-dimensional genomic data, Briefings in Bioinformatics, Vol. 8, No.1, pp. 32-44.
-
(2007)
Briefings in Bioinformatics
, vol.8
, Issue.1
, pp. 32-44
-
-
Boulesteix, A.-L.1
Strimmer, K.2
-
4
-
-
48249114165
-
Evaluating microarray-based classifiers: An overview
-
Boulesteix, A.-L., Strobl, C., Augustin, T. and Daumer, M. (2008), Evaluating microarray-based classifiers: an overview, Cancer Informatics, Vol. 6, pp. 77-97.
-
(2008)
Cancer Informatics
, vol.6
, pp. 77-97
-
-
Boulesteix, A.-L.1
Strobl, C.2
Augustin, T.3
Daumer, M.4
-
5
-
-
1342330535
-
Is cross-validation valid for small-sample microarray classification?
-
Braga-Neto, U.M. and Dougherty, E.R. (2004), Is cross-validation valid for small-sample microarray classification?, Bioinformatics, Vol. 20, No.3, pp. 374-80.
-
(2004)
Bioinformatics
, vol.20
, Issue.3
, pp. 374-80
-
-
Braga-Neto, U.M.1
Dougherty, E.R.2
-
6
-
-
60649115993
-
-
Cognitive Technologies, Springer, New York, NY
-
Brazdil, P., Giraud-Carrier, C., Soares, C. and Vilalta, R. (2009), Metalearning: Applications to Data Mining, Cognitive Technologies, Springer, New York, NY.
-
(2009)
Metalearning: Applications to Data Mining
-
-
Brazdil, P.1
Giraud-Carrier, C.2
Soares, C.3
Vilalta, R.4
-
7
-
-
0035478854
-
Random forests
-
Breiman, L. (2001), Random forests, Machine Learning, Vol. 45, No.1, pp. 5-32.
-
(2001)
Machine Learning
, vol.45
, Issue.1
, pp. 5-32
-
-
Breiman, L.1
-
8
-
-
39749093807
-
Which missing value imputation method to use in expression profiles: A comparative study and two selection schemes
-
Brock, G.N., Shaffer, J.R., Blakesley, R.E., Lotz, M.J. and Tseng, G.C. (2008), Which missing value imputation method to use in expression profiles: a comparative study and two selection schemes, BMC Bioinformatics, Vol. 9, No.12.
-
(2008)
BMC Bioinformatics
, vol.9
, Issue.12
-
-
Brock, G.N.1
Shaffer, J.R.2
Blakesley, R.E.3
Lotz, M.J.4
Tseng, G.C.5
-
9
-
-
56349090074
-
Ranking and selecting clustering algorithms using a meta-learning approach
-
IEEE, Hong Kong
-
de Souto, M.C.P., Prudencio, R.B.C., Soares, R.G.F., Araujo, D.A.S., Costa, I.G., Ludermir, T.B. and Schliep, A. (2008), Ranking and selecting clustering algorithms using a meta-learning approach, IEEE International Joint Conference on Neural Networks (IJCNN), pp. 3729-35, IEEE, Hong Kong.
-
(2008)
IEEE International Joint Conference on Neural Networks (IJCNN)
, pp. 3729-35
-
-
de Souto, M.C.P.1
Prudencio, R.B.C.2
Soares, R.G.F.3
Araujo, D.A.S.4
Costa, I.G.5
Ludermir, T.B.6
Schliep, A.7
-
10
-
-
0036489046
-
Comparison of discrimination methods for the classification of tumors using gene expression data
-
Dudoit, S., Fridlyand, J. and Speed, T.P. (2002), Comparison of discrimination methods for the classification of tumors using gene expression data, Journal of the American Statistical Association, Vol. 97, No.457, pp. 77-87.
-
(2002)
Journal of the American Statistical Association
, vol.97
, Issue.457
, pp. 77-87
-
-
Dudoit, S.1
Fridlyand, J.2
Speed, T.P.3
-
11
-
-
0031536511
-
Improvements on cross-validation: The 0.632+ bootstrap method
-
Efron, B. and Tibshirani, R. (1997), Improvements on cross-validation: the 0.632+ bootstrap method, J. Am. Stat. Assoc, Vol. 92, No.438, pp. 548-60.
-
(1997)
J. Am. Stat. Assoc
, vol.92
, Issue.438
, pp. 548-60
-
-
Efron, B.1
Tibshirani, R.2
-
12
-
-
18744413287
-
Estimating misclassification error with small samples via bootstrap cross-validation
-
Fu, W.J., Carroll, R.J. and Wang, S. (2005), Estimating misclassification error with small samples via bootstrap cross-validation, Bioinformatics, Vol. 21, No.9, pp. 1979-86.
-
(2005)
Bioinformatics
, vol.21
, Issue.9
, pp. 1979-86
-
-
Fu, W.J.1
Carroll, R.J.2
Wang, S.3
-
13
-
-
0033569406
-
Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
-
Golub, T.R., Slonim, D.K., Tamayo, P., Huard, C. and Gaasenbeek, M. (1999), Molecular classification of cancer: class discovery and class prediction by gene expression monitoring, Science, Vol. 286, pp. 531-7.
-
(1999)
Science
, vol.286
, pp. 531-7
-
-
Golub, T.R.1
Slonim, D.K.2
Tamayo, P.3
Huard, C.4
Gaasenbeek, M.5
-
14
-
-
58849118133
-
Predicting the performance of learning algorithms using support vector machines as meta-regressors
-
Guerra, S.B., Prudêncio, R.B.C. and Ludermir, T.B. (2008), Predicting the performance of learning algorithms using support vector machines as meta-regressors, ICANN, No.1, pp. 523-32.
-
(2008)
ICANN
, Issue.1
, pp. 523-32
-
-
Guerra, S.B.1
Prudêncio, R.B.C.2
Ludermir, T.B.3
-
15
-
-
21844486429
-
Penalized discriminant analysis
-
Hastie, T., Buja, A. and Tibshirani, R. (1995), Penalized discriminant analysis, Ann. Statist, Vol. 23, pp. 73-102.
-
(1995)
Ann. Statist
, vol.23
, pp. 73-102
-
-
Hastie, T.1
Buja, A.2
Tibshirani, R.3
-
16
-
-
25444467981
-
A comparative study of discriminating human heart failure etiology using gene expression profiles
-
Huang, X., Pan, W., Grindle, S., Han, X., Chen, Y. and Park, S. (2005), A comparative study of discriminating human heart failure etiology using gene expression profiles, BMC Bioinformatics, Vol. 6, No.205.
-
(2005)
BMC Bioinformatics
, vol.6
, Issue.205
-
-
Huang, X.1
Pan, W.2
Grindle, S.3
Han, X.4
Chen, Y.5
Park, S.6
-
17
-
-
37349009294
-
A comparison of bootstrap methods and an adjusted bootstrap approach for estimating the prediction error in microarray classification
-
Jiang, W. and Simon, R. (2007), A comparison of bootstrap methods and an adjusted bootstrap approach for estimating the prediction error in microarray classification, Statistics in Medicine, Vol. 26, pp. 5320-34.
-
(2007)
Statistics in Medicine
, vol.26
, pp. 5320-34
-
-
Jiang, W.1
Simon, R.2
-
18
-
-
33748849648
-
Machine learning in bioinformatics
-
Larranaga, P., Calvo, B., Santana, R., Bielza, C., Galdiano, I., Inza, J.A., Lozano, R., Armañanzas, G., Perez, A. and Robles, V. (2006), Machine learning in bioinformatics, Briefings in Bioinformatics, Vol. 7, No.1, pp. 86-112.
-
(2006)
Briefings in Bioinformatics
, vol.7
, Issue.1
, pp. 86-112
-
-
Larranaga, P.1
Calvo, B.2
Santana, R.3
Bielza, C.4
Galdiano, I.5
Inza, J.A.6
Lozano, R.7
Armañanzas, G.8
Perez, A.9
Robles, V.10
-
19
-
-
10444280144
-
An extensive comparison of recent classification tools applied to microarray data
-
Lee, J.W., Lee, J.B., Park, M. and Song, S.H. (2005), An extensive comparison of recent classification tools applied to microarray data, Computational Statistics & Data Analysis, Vol. 48, No.4, pp. 869-85.
-
(2005)
Computational Statistics & Data Analysis
, vol.48
, Issue.4
, pp. 869-85
-
-
Lee, J.W.1
Lee, J.B.2
Park, M.3
Song, S.H.4
-
20
-
-
9244261068
-
Evaluating methods for classifying expression data
-
Man, M.Z., Dyson, G., Johnson, K. and Liao, B. (2004), Evaluating methods for classifying expression data, J Biopharm Stat, Vol. 14, No.4, pp. 1065-84.
-
(2004)
J Biopharm Stat
, vol.14
, Issue.4
, pp. 1065-84
-
-
Man, M.Z.1
Dyson, G.2
Johnson, K.3
Liao, B.4
-
22
-
-
0036740519
-
Multi-class cancer classification via partial least squares with gene expression profiles
-
Nguyen, D.V. and Rocke, D.M. (2002), Multi-class cancer classification via partial least squares with gene expression profiles, Bioinformatics, Vol. 18, No.9, pp. 1216-26.
-
(2002)
Bioinformatics
, vol.18
, Issue.9
, pp. 1216-26
-
-
Nguyen, D.V.1
Rocke, D.M.2
-
23
-
-
0037381008
-
Gene expression-based classification of malignant gliomas correlates better with survival than histological classification
-
Nutt, C.L., Mani, D.R., Betensky, R.A., Tamayo, P., Cairncross, J.G., Ladd, C., Pohl, U., Hartmann, C., McLaughlin, M.E., Batchelor, T.T., Black, P.M., von Deimling, A., Pomeroy, S.L., Golub, T.R. and Louis, D.N. (2003), Gene expression-based classification of malignant gliomas correlates better with survival than histological classification, Cancer Research, Vol. 63, No.7, pp. 1602-7.
-
(2003)
Cancer Research
, vol.63
, Issue.7
, pp. 1602-7
-
-
Nutt, C.L.1
Mani, D.R.2
Betensky, R.A.3
Tamayo, P.4
Cairncross, J.G.5
Ladd, C.6
Pohl, U.7
Hartmann, C.8
McLaughlin, M.E.9
Batchelor, T.T.10
Black, P.M.11
von Deimling, A.12
Pomeroy, S.L.13
Golub, T.R.14
Louis, D.N.15
-
24
-
-
0037447386
-
Pattern recognition in gene expression profiling using DNA array: A comparative study of different statistical methods applied to cancer classification
-
Romualdi, C., Campanaro, S., Campagna, D., Celegato, B., Cannata, N., Toppo, S. and Valle, G. (2003), Pattern recognition in gene expression profiling using DNA array: a comparative study of different statistical methods applied to cancer classification, Human Molecular Genetics, Vol. 12, No.8, pp. 823-36.
-
(2003)
Human Molecular Genetics
, vol.12
, Issue.8
, pp. 823-36
-
-
Romualdi, C.1
Campanaro, S.2
Campagna, D.3
Celegato, B.4
Cannata, N.5
Toppo, S.6
Valle, G.7
-
25
-
-
72849127013
-
-
Methods Express Series, Scion Publishing Ltd, Bloxham, 1st ed
-
Schena, M. (2007), Methods Express Series, DNA Microarrays, Scion Publishing Ltd, Bloxham, 1st ed.
-
(2007)
DNA Microarrays
-
-
Schena, M.1
-
26
-
-
0042923097
-
Class prediction and discovery using gene microarray and proteomics mass spectroscopy data: Curses, caveats, cautions
-
Somorjai, R., Dolenko, B. and Baumgartner, R. (2003), Class prediction and discovery using gene microarray and proteomics mass spectroscopy data: curses, caveats, cautions, Bioinformatics, Vol. 19, No.12, pp. 1484-91.
-
(2003)
Bioinformatics
, vol.19
, Issue.12
, pp. 1484-91
-
-
Somorjai, R.1
Dolenko, B.2
Baumgartner, R.3
-
27
-
-
15844413351
-
A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis
-
Statnikov, A., Aliferis, C.F., Tsamardinos, I., Hardin, D. and Levy, S. (2005), A comprehensive evaluation of multicategory classification methods for microarray gene expression cancer diagnosis, Bioinformatics, Vol. 21, No.5, pp. 631-43.
-
(2005)
Bioinformatics
, vol.21
, Issue.5
, pp. 631-43
-
-
Statnikov, A.1
Aliferis, C.F.2
Tsamardinos, I.3
Hardin, D.4
Levy, S.5
-
28
-
-
68949128341
-
-
Information Science and Statistics Series, Springer, New York, NY
-
Steinwart, I. and Christmann, A. (2008), Information Science and Statistics Series, Support Vector Machines, Springer, New York, NY.
-
(2008)
Support Vector Machines
-
-
Steinwart, I.1
Christmann, A.2
-
29
-
-
0037076272
-
Diagnosis of multiple cancer types by shrunken centroids of gene expression
-
Tibshirani, R., Hastie, T., Narasimhan, B. and Chu, G. (2002), Diagnosis of multiple cancer types by shrunken centroids of gene expression, PNAS, Vol. 99, No.10, pp. 6567-72.
-
(2002)
PNAS
, vol.99
, Issue.10
, pp. 6567-72
-
-
Tibshirani, R.1
Hastie, T.2
Narasimhan, B.3
Chu, G.4
-
30
-
-
77957040774
-
A survey of computational methods used in microarray data interpretation
-
Tjaden, B. and Cohen, J. (2006), A survey of computational methods used in microarray data interpretation, Applied Mycology and Biotechnology, Bioinformatics, Vol. 6, pp. 1-18.
-
(2006)
Applied Mycology and Biotechnology, Bioinformatics
, vol.6
, pp. 1-18
-
-
Tjaden, B.1
Cohen, J.2
-
31
-
-
21344446106
-
A molecular classification of papillary renal cell carcinoma
-
Yang, X.J., Tan, M.-H., Kim, H.L., Ditlev, J.A., Betten, M.W., Png, C.E., Kort, E.J., Futami, K., Furge, K.A. and Takahashi, M. (2005), A molecular classification of papillary renal cell carcinoma, Cancer Research, Vol. 65, No.13, pp. 5628-37.
-
(2005)
Cancer Research
, vol.65
, Issue.13
, pp. 5628-37
-
-
Yang, X.J.1
Tan, M.-H.2
Kim, H.L.3
Ditlev, J.A.4
Betten, M.W.5
Png, C.E.6
Kort, E.J.7
Futami, K.8
Furge, K.A.9
Takahashi, M.10
|