-
1
-
-
0035783061
-
Protein repeats: structures, functions, and evolution
-
Andrade M.A., Perez-Iratxeta C., Ponting C.P. Protein repeats: structures, functions, and evolution. J. Struct. Biol. 2001, 134:117-131.
-
(2001)
J. Struct. Biol.
, vol.134
, pp. 117-131
-
-
Andrade, M.A.1
Perez-Iratxeta, C.2
Ponting, C.P.3
-
2
-
-
0027333330
-
Hundreds of ankyrin-like repeats in functionally diverse proteins: mobile modules that cross phyla horizontally?
-
Bork P. Hundreds of ankyrin-like repeats in functionally diverse proteins: mobile modules that cross phyla horizontally?. Proteins 1993, 17:363-374.
-
(1993)
Proteins
, vol.17
, pp. 363-374
-
-
Bork, P.1
-
3
-
-
39149098445
-
Designed armadillo repeat proteins as general peptide-binding scaffolds: consensus design and computational optimization of the hydrophobic core
-
Parmeggiani F., Pellarin R., Larsen A.P., Varadamsetty G., Stumpp M.T., Zerbe O., et al. Designed armadillo repeat proteins as general peptide-binding scaffolds: consensus design and computational optimization of the hydrophobic core. J. Mol. Biol. 2008, 376:1282-1304.
-
(2008)
J. Mol. Biol.
, vol.376
, pp. 1282-1304
-
-
Parmeggiani, F.1
Pellarin, R.2
Larsen, A.P.3
Varadamsetty, G.4
Stumpp, M.T.5
Zerbe, O.6
-
4
-
-
0037648552
-
Design of stable alpha-helical arrays from an idealized TPR motif
-
Main E.R., Xiong Y., Cocco M.J., D'Andrea L., Regan L. Design of stable alpha-helical arrays from an idealized TPR motif. Structure 2003, 11:497-508.
-
(2003)
Structure
, vol.11
, pp. 497-508
-
-
Main, E.R.1
Xiong, Y.2
Cocco, M.J.3
D'Andrea, L.4
Regan, L.5
-
5
-
-
0043281585
-
Designing repeat proteins: modular leucine-rich repeat protein libraries based on the mammalian ribonuclease inhibitor family
-
Stumpp M.T., Forrer P., Binz H.K., Plückthun A. Designing repeat proteins: modular leucine-rich repeat protein libraries based on the mammalian ribonuclease inhibitor family. J. Mol. Biol. 2003, 332:471-487.
-
(2003)
J. Mol. Biol.
, vol.332
, pp. 471-487
-
-
Stumpp, M.T.1
Forrer, P.2
Binz, H.K.3
Plückthun, A.4
-
6
-
-
18744380008
-
Consensus-derived structural determinants of the ankyrin repeat motif
-
Mosavi L.K., Minor D.L., Peng Z.Y. Consensus-derived structural determinants of the ankyrin repeat motif. Proc. Natl Acad. Sci. USA 2002, 99:16029-16034.
-
(2002)
Proc. Natl Acad. Sci. USA
, vol.99
, pp. 16029-16034
-
-
Mosavi, L.K.1
Minor, D.L.2
Peng, Z.Y.3
-
7
-
-
0042780350
-
Designing repeat proteins: well-expressed, soluble and stable proteins from combinatorial libraries of consensus ankyrin repeat proteins
-
Binz H.K., Stumpp M.T., Forrer P., Amstutz P., Plückthun A. Designing repeat proteins: well-expressed, soluble and stable proteins from combinatorial libraries of consensus ankyrin repeat proteins. J. Mol. Biol. 2003, 332:489-503.
-
(2003)
J. Mol. Biol.
, vol.332
, pp. 489-503
-
-
Binz, H.K.1
Stumpp, M.T.2
Forrer, P.3
Amstutz, P.4
Plückthun, A.5
-
8
-
-
38049063892
-
Folding and unfolding mechanism of highly stable full-consensus ankyrin repeat proteins
-
Wetzel S.K., Settanni G., Kenig M., Binz H.K., Plückthun A. Folding and unfolding mechanism of highly stable full-consensus ankyrin repeat proteins. J. Mol. Biol. 2008, 376:241-257.
-
(2008)
J. Mol. Biol.
, vol.376
, pp. 241-257
-
-
Wetzel, S.K.1
Settanni, G.2
Kenig, M.3
Binz, H.K.4
Plückthun, A.5
-
9
-
-
0344874146
-
Structure-based substitutions for increased solubility of a designed protein
-
Mosavi L.K., Peng Z.Y. Structure-based substitutions for increased solubility of a designed protein. Protein Eng. 2003, 16:739-745.
-
(2003)
Protein Eng.
, vol.16
, pp. 739-745
-
-
Mosavi, L.K.1
Peng, Z.Y.2
-
10
-
-
37349036497
-
Characterization and further stabilization of designed ankyrin repeat proteins by combining molecular dynamics simulations and experiments
-
Interlandi G., Wetzel S.K., Settanni G., Plückthun A., Caflisch A. Characterization and further stabilization of designed ankyrin repeat proteins by combining molecular dynamics simulations and experiments. J. Mol. Biol. 2008, 375:837-854.
-
(2008)
J. Mol. Biol.
, vol.375
, pp. 837-854
-
-
Interlandi, G.1
Wetzel, S.K.2
Settanni, G.3
Plückthun, A.4
Caflisch, A.5
-
11
-
-
2342624119
-
High-affinity binders selected from designed ankyrin repeat protein libraries
-
Binz H.K., Amstutz P., Kohl A., Stumpp M.T., Briand C., Forrer P., et al. High-affinity binders selected from designed ankyrin repeat protein libraries. Nat. Biotechnol. 2004, 22:575-582.
-
(2004)
Nat. Biotechnol.
, vol.22
, pp. 575-582
-
-
Binz, H.K.1
Amstutz, P.2
Kohl, A.3
Stumpp, M.T.4
Briand, C.5
Forrer, P.6
-
12
-
-
51349091340
-
Efficient selection of DARPins with sub-nanomolar affinities using SRP phage display
-
Steiner D., Forrer P., Plückthun A. Efficient selection of DARPins with sub-nanomolar affinities using SRP phage display. J. Mol. Biol. 2008, 382:1211-1227.
-
(2008)
J. Mol. Biol.
, vol.382
, pp. 1211-1227
-
-
Steiner, D.1
Forrer, P.2
Plückthun, A.3
-
13
-
-
0037452697
-
Designed to be stable: crystal structure of a consensus ankyrin repeat protein
-
Kohl A., Binz H.K., Forrer P., Stumpp M.T., Plückthun A., Grütter M.G. Designed to be stable: crystal structure of a consensus ankyrin repeat protein. Proc. Natl Acad. Sci. USA 2003, 100:1700-1705.
-
(2003)
Proc. Natl Acad. Sci. USA
, vol.100
, pp. 1700-1705
-
-
Kohl, A.1
Binz, H.K.2
Forrer, P.3
Stumpp, M.T.4
Plückthun, A.5
Grütter, M.G.6
-
14
-
-
21744440783
-
Intracellular kinase inhibitors selected from combinatorial libraries of designed ankyrin repeat proteins
-
Amstutz P., Binz H.K., Parizek P., Stumpp M.T., Kohl A., Grütter M.G., et al. Intracellular kinase inhibitors selected from combinatorial libraries of designed ankyrin repeat proteins. J. Biol. Chem. 2005, 280:24715-24722.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 24715-24722
-
-
Amstutz, P.1
Binz, H.K.2
Parizek, P.3
Stumpp, M.T.4
Kohl, A.5
Grütter, M.G.6
-
15
-
-
23444448571
-
Allosteric inhibition of aminoglycoside phosphotransferase by a designed ankyrin repeat protein
-
Kohl A., Amstutz P., Parizek P., Binz H.K., Briand C., Capitani G., et al. Allosteric inhibition of aminoglycoside phosphotransferase by a designed ankyrin repeat protein. Structure 2005, 13:1131-1141.
-
(2005)
Structure
, vol.13
, pp. 1131-1141
-
-
Kohl, A.1
Amstutz, P.2
Parizek, P.3
Binz, H.K.4
Briand, C.5
Capitani, G.6
-
16
-
-
38049034890
-
Stabilizing ionic interactions in a full-consensus ankyrin repeat protein
-
Merz T., Wetzel S.K., Firbank S., Plückthun A., Grütter M.G., Mittl P.R. Stabilizing ionic interactions in a full-consensus ankyrin repeat protein. J. Mol. Biol. 2008, 376:232-240.
-
(2008)
J. Mol. Biol.
, vol.376
, pp. 232-240
-
-
Merz, T.1
Wetzel, S.K.2
Firbank, S.3
Plückthun, A.4
Grütter, M.G.5
Mittl, P.R.6
-
17
-
-
33749002845
-
Molecular dynamics study of the stabilities of consensus designed ankyrin repeat proteins
-
Yu H., Kohl A., Binz H.K., Plückthun A., Grütter M.G., van Gunsteren W.F. Molecular dynamics study of the stabilities of consensus designed ankyrin repeat proteins. Proteins 2006, 65:285-295.
-
(2006)
Proteins
, vol.65
, pp. 285-295
-
-
Yu, H.1
Kohl, A.2
Binz, H.K.3
Plückthun, A.4
Grütter, M.G.5
van Gunsteren, W.F.6
-
18
-
-
33749001195
-
Crystal structure of a consensus-designed ankyrin repeat protein: implications for stability
-
Binz H.K., Kohl A., Plückthun A., Grütter M.G. Crystal structure of a consensus-designed ankyrin repeat protein: implications for stability. Proteins 2006, 65:280-284.
-
(2006)
Proteins
, vol.65
, pp. 280-284
-
-
Binz, H.K.1
Kohl, A.2
Plückthun, A.3
Grütter, M.G.4
-
19
-
-
0027772959
-
Shape complementarity at protein/protein interfaces
-
Lawrence M.C., Colman P.M. Shape complementarity at protein/protein interfaces. J. Mol. Biol. 1993, 234:946-950.
-
(1993)
J. Mol. Biol.
, vol.234
, pp. 946-950
-
-
Lawrence, M.C.1
Colman, P.M.2
-
20
-
-
34447508216
-
Phaser crystallographic software
-
McCoy A.J., Grosse-Kunstleve R.W., Adams P.D., Winn M.D., Storoni L.C., Read R.J. Phaser crystallographic software. J. Appl. Crystallogr. 2007, 40:658-674.
-
(2007)
J. Appl. Crystallogr.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
22
-
-
77956176007
-
Residue-resolved stability of full-consensus ankyrin repeat proteins probed by NMR
-
Wetzel S.K., Ewald C., Settanni G., Jurt S., Plückthun A., Zerbe O. Residue-resolved stability of full-consensus ankyrin repeat proteins probed by NMR. J. Mol. Biol. 2010, 402:241-258.
-
(2010)
J. Mol. Biol.
, vol.402
, pp. 241-258
-
-
Wetzel, S.K.1
Ewald, C.2
Settanni, G.3
Jurt, S.4
Plückthun, A.5
Zerbe, O.6
-
23
-
-
0027879008
-
Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
-
Kabsch W. Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J. Appl. Crystallogr. 1993, 26:795-800.
-
(1993)
J. Appl. Crystallogr.
, vol.26
, pp. 795-800
-
-
Kabsch, W.1
-
24
-
-
14244272868
-
PHENIX: building new software for automated crystallographic structure determination
-
Adams P.D., Grosse-Kunstleve R.W., Hung L.W., Ioerger T.R., McCoy A.J., Moriarty N.W., et al. PHENIX: building new software for automated crystallographic structure determination. Acta Crystallogr. Sect. D: Biol. Crystallogr. 2002, 58:1948-1954.
-
(2002)
Acta Crystallogr. Sect. D: Biol. Crystallogr.
, vol.58
, pp. 1948-1954
-
-
Adams, P.D.1
Grosse-Kunstleve, R.W.2
Hung, L.W.3
Ioerger, T.R.4
McCoy, A.J.5
Moriarty, N.W.6
-
25
-
-
57449120891
-
Asparagine beta-hydroxylation stabilizes the ankyrin repeat domain fold
-
Kelly L., McDonough M.A., Coleman M.L., Ratcliffe P.J., Schofield C.J. Asparagine beta-hydroxylation stabilizes the ankyrin repeat domain fold. Mol. Biosyst. 2009, 5:52-58.
-
(2009)
Mol. Biosyst.
, vol.5
, pp. 52-58
-
-
Kelly, L.1
McDonough, M.A.2
Coleman, M.L.3
Ratcliffe, P.J.4
Schofield, C.J.5
-
27
-
-
0031059039
-
Detecting and overcoming crystal twinning
-
Yeates T.O. Detecting and overcoming crystal twinning. Methods Enzymol. 1997, 276:344-358.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 344-358
-
-
Yeates, T.O.1
-
29
-
-
34547592557
-
MolProbity: all-atom contacts and structure validation for proteins and nucleic acids
-
Davis I.W., Leaver-Fay A., Chen V.B., Block J.N., Kapral G.J., Wang X., et al. MolProbity: all-atom contacts and structure validation for proteins and nucleic acids. Nucleic Acids Res. 2007, 35:W375-383.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Davis, I.W.1
Leaver-Fay, A.2
Chen, V.B.3
Block, J.N.4
Kapral, G.J.5
Wang, X.6
-
30
-
-
0027169515
-
Main-chain bond lengths and bond angles in protein structures
-
Laskowski R.A., Moss D.S., Thornton J.M. Main-chain bond lengths and bond angles in protein structures. J. Mol. Biol. 1993, 231:1049-1067.
-
(1993)
J. Mol. Biol.
, vol.231
, pp. 1049-1067
-
-
Laskowski, R.A.1
Moss, D.S.2
Thornton, J.M.3
|